KEGG   Vibrio anguillarum 775: VAA_03635
Entry
VAA_03635         CDS       T01536                                 
Name
(GenBank) Exodeoxyribonuclease V alpha chain
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
van  Vibrio anguillarum 775
Pathway
van03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:van00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    VAA_03635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:van03400]
    VAA_03635
Enzymes [BR:van01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     VAA_03635
DNA repair and recombination proteins [BR:van03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     VAA_03635
SSDB
Motif
Pfam: AAA_19 AAA_30 RecD_N UvrD_C_2 SH3_13 AAA_11 Helicase_RecD Viral_helicase1 UvrD-helicase SLFN-g3_helicase AAA_22 nSTAND3 AAA_16 DEAD AAA_28 UvrD_C MukB TrwB_AAD_bind ATPase T2SSE FtsK_SpoIIIE ResIII CbiA NTPase_1 AAA
Other DBs
NCBI-ProteinID: AEH32451
Position
I:922231..924357
AA seq 708 aa
MSSTLMITLKQLAEKGAMRQLDYQFARFIEQKSQQQLGAEHSQALGFIAAVVSAELAKGH
ICLPLVDASTAQGVDLAAKLGLFGEAALAINQHLLVIDWPWLLNRSDLVGQQGEAVPLMF
DGQRLYLHRYWHYEVTLAQRLISFGTPMSLKPTDVQKLKLLLDTLFARQYHFLLHALRQL
PETANASACQQQVCDFLDVVNADELDWNEIEQVISQARTAKELEALETLIPQSVCINWQK
VAAAVALTRRFAVISGGPGTGKTTTVTKLLAALITQAQQQGETPTIKLVAPTGKAAARLT
ESIGKAVAELAVEPALKAAIPTESSTLHRLLGVIPNSVEFRHHQRNPLHLDILVVDEASM
VDLPMMVKLIEALPKHARLILLGDKDQLASVEAGAVLGDICSFLTLGYSRAHSEYLAKLT
GYQTLIAHSHPNVTPISDSLCMLKKSYRFDVRSGIGQFAKAINAGQVAMVDEVLKRNYAD
ITHHSLSSESYNLMLKTLVKEYGRYLTRIESSGAYTAETQAQKAKAVLDCFNQCRLLCAI
REGDFGVSGLNQRIERALIARKLIKTQDEIWYHGRPVMVARNDHGLGLYNGDIGICMLDT
SEQEPRLKVYFELPDGSVKAILPSRVPEHETAYAMTIHKSQGSEFDLTLMILPPDFSPIL
TRELIYTGITRAKKQLMLFADMGTMKRGLKIKTQRASGLVTRLDKRLA
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgagcagtacgctaatgataacgcttaagcagttagcggaaaaaggcgctatgcgtcag
ttagattaccaattcgcgcgttttatcgaacaaaaaagccagcagcaacttggcgctgaa
catagccaagcgctcggatttattgccgcggtggtcagtgctgaattggccaaggggcat
atctgcttacctttagtggatgcttcaacggcacagggtgtcgacctcgcagctaagtta
ggcttgtttggtgaggcagcattggcgatcaatcagcacctattggtgattgattggcct
tggctactcaaccgttcagacttagtcggacaacaaggggaagcggtgcctttaatgttt
gatgggcaacgtttatatctacaccgttattggcattatgaagttaccttagcacagcgt
ttaatcagctttgggacacccatgagcctaaagcctactgatgtccaaaagctaaaattg
ctgctagatacactgtttgcgcgtcaataccactttctgctccatgcgcttcgtcaattg
ccagagacagccaatgcatcagcatgccagcaacaagtgtgtgattttctggatgtggtc
aacgccgatgaacttgattggaatgagattgagcaagtcattagccaagcacgtacggcg
aaagaacttgaagcattagagacgctgatcccgcaaagcgtttgcatcaactggcaaaaa
gtcgcagcggcagtggcactgacacgccgctttgccgtgatttctggcgggccgggaacc
ggtaaaaccaccacggttaccaaattactagccgctttgattacccaagcccaacagcaa
ggtgagacgcccaccattaaattggtcgcaccaacgggtaaagctgcggcacgtttgacg
gaatcgatcggtaaagcggtggctgaactggcggttgagccggcgttgaaagcggcgatt
cccaccgagtcgagcactcttcaccgtttattgggcgtcatacctaacagtgttgagttt
cgtcaccatcagcgtaacccgctgcatttagatatattggtggttgatgaagcatcgatg
gtcgatttaccgatgatggtcaagttaatcgaggcattacccaaacacgcacgcttgatt
ttactaggtgataaagaccaactcgcgtcagtcgaagcgggcgctgtgctgggggacatt
tgttcatttttgaccttaggctacagccgagcgcacagcgagtacctagctaagttaaca
ggctatcaaacactgattgctcattcacaccctaacgtaaccccgatttcagacagttta
tgcatgctgaaaaaaagctaccgctttgatgtccgatcaggcattggtcaattcgcaaaa
gcgatcaatgctgggcaagtggctatggtggatgaggtgttaaaacgcaattatgctgat
attacgcaccactcactcagcagtgaaagctataacctaatgctgaaaaccttagtcaag
gagtatggtcgttatctcacgcgcatcgagagttctggtgcttatactgcggaaactcaa
gcccaaaaagccaaagccgtattggattgctttaatcaatgccgtttgctttgcgctatt
cgtgaaggggattttggggtaagtggtttgaatcaacgtattgaacgtgcgctgatcgca
cgtaagttgattaagactcaagatgagatttggtatcacggccgacccgtgatggtggcg
cgtaacgatcatgggctgggtttgtataatggtgatatcggcatatgcatgcttgatacg
agcgagcaagaaccgcgtttgaaagtgtattttgagctgccagatggtagcgtgaaagcc
attttaccaagccgcgtaccagagcacgaaacagcctatgcgatgaccatccataaatca
caaggcagtgagtttgatctaacgctgatgattttaccgcctgattttagcccgatattg
accagagagcttatctatactggcattacgcgcgccaagaagcagctgatgctttttgct
gacatgggaacgatgaaacgagggctcaagataaaaacgcagcgagccagcggcttagtt
acgagattagacaagagactagcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (25)   
   Pfam (25)   
All databases (34)   

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