KEGG   Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0 8): YE4178
Entry
YE4178            CDS       T00469                                 
Symbol
thdF
Name
(GenBank) putative thiophene and furan oxidation protein
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
yen  Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
Brite
KEGG Orthology (KO) [BR:yen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:yen03016]
    YE4178 (thdF)
Transfer RNA biogenesis [BR:yen03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    YE4178 (thdF)
 Prokaryotic type
   Methyltransferases
    YE4178 (thdF)
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N Dynamin_N RsgA_GTPase AIG1 Ras ABC_tran Roc AAA_28 Arf SRPRB Gtr1_RagA
Other DBs
NCBI-ProteinID: CAL14194
UniProt: A1JT87
Position
4577454..4578818
AA seq 454 aa
MSTTDTIVAQATPPGRGGVGILRVSGRAAATVAQAVLGKLPKPRYADYLPFKDVDGSTLD
QGIALYFPGPNSFTGEDVLELQGHGGPVILDLLLKRILALPGLRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSAVNSLQGAFSVRIHQLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEGQLNGVMADLEQVRTEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWHEIEQADRVL
FMVDGTTTDATEPAAIWPEFMARLPATLPITVVRNKADITGETLGLTEVNGHSLIRLSAR
TGEGIDLLRNHLKQSMGFTSNTEGGFLARRRHLQALETAAQHLAQGHEQLVSAYAGELLA
EELRLAQQSLSEITGEFSSDDLLGRIFSSFCIGK
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgagcaccactgatactatcgtggcacaagcaacacctccaggccgtggtggcgttggt
attttacgtgtttcaggtcgtgctgccgccacggttgcgcaagcagttttggggaaatta
cccaagccacgctatgccgattacctaccgtttaaagatgtcgatggcagcaccttggac
caaggtatcgcactctactttcctggcccaaattccttcactggcgaagatgtactggaa
ctgcaaggtcatggtggccccgttatactggatttgctgttaaaacgcattctggccctg
ccagggctgcgcattgcccgtccgggtgaattctctgagcgcgcattcttaaacgacaag
ctggatctggcacaagcagaagctattgctgatctcattgacgccagctcagagcaagca
gcacgctcggcagtgaattcattacagggcgcattttcagtccgtatccatcaattggtg
gaagcacttactcacttgcgaatctacgtcgaagctgcgattgacttcccagatgaagaa
attgatttcctgtctgatggcaagattgaaggtcaattgaatggggtgatggcagatttg
gaacaagtgcgcactgaagcccgacaaggcagtttgctgcgcgaagggatgaaagtggtc
attgccggccgaccgaatgctggaaaatcaagtttactcaatgcgttagcgggccgtgaa
gccgcaattgtcaccgatattgccggcaccactcgtgatgtattgcgagaacatattcat
atcgatgggatgccattgcatataattgatacagcaggcctacgggaagccagtgacgaa
gttgagcgcattggtatcgaacgtgcgtggcatgagattgaacaagctgatcgggtgcta
tttatggttgatggcaccaccaccgacgccactgaaccggcagctatctggccagagttt
atggcgcgcttgcctgctacactgccgatcaccgtggtacgtaataaagctgacattaca
ggtgaaaccttaggtttgaccgaagtaaatggtcactcactaattcgcttgtcggcccga
accggtgaaggcattgacctgctgcgtaaccatctcaaacagagtatgggctttaccagc
aataccgaaggcggtttcctggcccgccgccgtcatttgcaagcgctggaaacagccgca
caacatctggcacaaggtcacgaacagttagtaagcgcttacgctggtgagttgctggcg
gaagaattacgtttagcacaacagtcattgagcgaaattaccggtgaatttagctctgat
gacttactggggcggattttctccagtttctgtattggaaaatga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (14)   
   Pfam (14)   
All databases (31)   

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