KEGG   Zygosaccharomyces rouxii: ZYRO0C02090g
Entry
ZYRO0C02090g      CDS       T01118                                 
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
zro  Zygosaccharomyces rouxii
Pathway
zro03030  DNA replication
zro03410  Base excision repair
zro03420  Nucleotide excision repair
zro03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:zro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ZYRO0C02090g
   03410 Base excision repair
    ZYRO0C02090g
   03420 Nucleotide excision repair
    ZYRO0C02090g
   03430 Mismatch repair
    ZYRO0C02090g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zro03032]
    ZYRO0C02090g
   03036 Chromosome and associated proteins [BR:zro03036]
    ZYRO0C02090g
   03400 DNA repair and recombination proteins [BR:zro03400]
    ZYRO0C02090g
DNA replication proteins [BR:zro03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    ZYRO0C02090g
  DNA Replication Termination Factors
   ELG1-RFC complex
    ZYRO0C02090g
Chromosome and associated proteins [BR:zro03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    ZYRO0C02090g
DNA repair and recombination proteins [BR:zro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     ZYRO0C02090g
  Check point factors
   HRAD17(Rad24)-RFC complex
    ZYRO0C02090g
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 DNA_pol3_delta AAA_22 RuvB_N AAA_16 AAA_14 AAA_assoc_2 DUF815 ResIII AAA_11 DEAD AAA_24 AAA_30 AAA_7 AAA_5 Viral_helicase1 bpMoxR AAA_28 AAA_25 ATPase_2 AAA_3 nSTAND3 Mg_chelatase AAA_18 AAA_19 RNA_helicase SLFN-g3_helicase
Other DBs
NCBI-GeneID: 8202939
NCBI-ProteinID: XP_002495745
UniProt: C5DSQ1
Position
C:complement(165011..166027)
AA seq 338 aa
MTIGNVKNMENLPWVEKYRPESLDDVYGQTEVITTIRKFLETGKLPHLLFYGPPGTGKTS
SIIALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADA
MTNAAQNALRRIIERYTKNTRFCILANYAHKLTPALLSRCTRFRFQPLPREAIQRRISNV
LVREQLQMTESAENALLDLSRGDMRRVLNVLQACKAVIDQPNVEITDDLIYDCCGAPNPQ
DLETILDSILKEDWTTAHYTLQKVRTSKGLALIDLIEGIVSILQGYQLENESTRISLLTG
LGDIEYAISRGGSEKIQTSAVIGVVKSSFEQEATKIHS
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgacaattggtaacgttaaaaatatggaaaacctgccatgggttgagaagtatcgtcca
gagtccttggacgacgtttatgggcaaacagaagtcatcacgactattcgtaagtttcta
gaaaccggtaaactaccacatctactgttttatggacctccaggtaccggtaagacatcg
tctattattgcacttgcaagagagatttacggcaagaattacagtaatatggtccttgag
ttaaacgcttccgatgatcgaggtattgatgtggtaagaaatcaaattaaggactttgca
tcgacaagacaaattttctcaaaaggtttcaaactgatcatcttagatgaagctgatgca
atgaccaatgctgctcaaaatgcattgcgtagaattatcgaaagatatactaaaaacaca
agattttgtatcttggccaattacgcacataaactaacccccgcattgctaagtcgttgt
actagatttagattccaaccattgccaagagaagcaatccaacgtcgaatttccaatgtt
ttagtacgagaacagttacaaatgaccgaaagtgctgagaatgcattacttgacttgtct
cgtggtgatatgcgtcgtgttctgaatgtgttacaggcttgcaaagcagtcatcgatcaa
cccaatgtcgaaataacagacgacctaatctatgactgttgcggtgcaccaaatcctcaa
gacctagagacaattctagattcaatcttgaaggaagactggacaactgctcactatact
ttacagaaagtgagaacctcaaagggtctagccctaatcgatttgatcgagggaatcgtg
tccatcttacaaggctatcagcttgaaaacgaatcgacaagaatcagtcttttaacgggt
ctaggcgacattgaatacgccatttctcgtggtggtagcgaaaaaatacaaacaagcgct
gttattggtgttgtcaagtcttcttttgaacaagaagctacgaaaatacattcttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (30)   
   Pfam (30)   
All databases (46)   

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