KEGG   Dryobates pubescens (Downy woodpecker): 104296583
Entry
104296583         CDS       T08526                                 
Name
(RefSeq) interstitial collagenase-like
  KO
K01388  matrix metalloproteinase-1 (interstitial collagenase) [EC:3.4.24.7]
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Pathway
dpub03320  PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    104296583
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:dpub01002]
    104296583
Enzymes [BR:dpub01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.24  Metalloendopeptidases
    3.4.24.7  interstitial collagenase
     104296583
Peptidases and inhibitors [BR:dpub01002]
 Metallo peptidases
  Family M10
   104296583
SSDB
Motif
Pfam: Peptidase_M10 Hemopexin PG_binding_1 Astacin Reprolysin_3 Reprolysin_5 Reprolysin_4 Peptidase_M54 DUF4953 Peptidase_M66 Peptidase_M57 Metallopep
Other DBs
NCBI-GeneID: 104296583
NCBI-ProteinID: XP_009894707
Position
Unknown
AA seq 466 aa
MKTLLLLLLLCVTISSAFPVAPETEDEGKTLQLVESYLRNFYDFQRDHHPHLRSNNENRL
VEKLKEMQAFFGLKVTGKPDLDTLGMMKKPRCGVPDIGRYVFTAGNPKWKKNNLTYRILN
YTPKMRQADVEEAVRKALHVWSNVTPLTFQRVEDKEADIMISFAYRDHRDNSPFDGPNGQ
LAHAFQPGEGIGGDVHLDEEEAWTKDGRGYNLFIVIAHELGHSLGLSHSSDPGALMYPAY
SYTDPKEFLLPQDDIDGIQAIYGQSNAAVQPTGPITPQACDPNLTFDAITTLRGEIMFFK
GRYMLRKHPARAETELNFISLFWPNLPSGIQAAYENVERDEVLLFKEDKYWVLRGYDVAP
GYPKPIYRLGFPKTVKRVNAAYSDETTGKTYFFVADRYWRYDENKRSMDHGYPRKIVSDF
GKIGRVDAAFQKDGHVYFFHGTTQFQFDPRAKRIVGRMKSISWFNC
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgaagactcttttgcttctcctgttgctctgtgtgaccatctcctctgcttttcctgtg
gctccagaaacagaagatgaaggaaaaaccctgcagctggtagagagctatctacggaat
ttctacgatttccaaagggatcaccatcctcatttaagaagcaacaatgaaaatcgcctt
gttgaaaagctgaaggaaatgcaggcattctttggactgaaagtgactgggaaacctgac
cttgacaccttggggatgatgaaaaagcccagatgtggtgtccctgatatagggcgatat
gtgttcacagcaggaaatcccaaatggaaaaaaaataatctgacatacaggattctgaat
tatactccaaaaatgagacaagctgatgtagaggaagcagtccgaaaagctctccacgtc
tggagcaatgtgacaccattaacattccagagggttgaggacaaagaagcagatataatg
atctcttttgcttatagagatcaccgtgacaactctccctttgatggccccaatgggcag
ctggctcatgctttccagcctggggagggtatcggtggagatgtgcatctcgatgaggag
gaagcctggacaaaagatggaagaggctataatttgttcattgttattgcccatgagctt
ggccactcattgggtctgtctcattcaagtgatcctggggccctgatgtatccagcttac
tcctacaccgaccccaaagaattccttcttcctcaggatgacattgatggcattcaagcc
atctatggccagtctaatgctgctgtgcagccaacaggacccataaccccacaagcctgt
gatccaaacttgacatttgatgctattactaccctacgtggagaaataatgttcttcaag
ggcagatatatgctgcgcaaacatcctgcgagggcagagacggaactcaattttatatca
ctgttctggccaaacttgccatcaggaattcaagctgcttatgaaaacgtcgagagggat
gaagttttgctttttaaagaggataagtactgggttctcaggggatacgacgttgcacct
ggttatccgaaaccaatctatcgtttggggttcccgaagactgttaaaagagttaatgca
gcttacagtgatgaaaccacagggaagacatacttcttcgtagctgacagatactggaga
tacgatgaaaataaaaggtccatggatcacggataccccaggaaaatagtctctgacttt
gggaaaattggcagagttgatgctgctttccagaaagatggccatgtctatttcttccat
ggaacaactcagttccagtttgaccctcgtgccaaacggattgtcggacgaatgaaaagc
atcagctggtttaattgctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (16)   

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