KEGG   Grus americana (Whooping crane): 129200376
Entry
129200376         CDS       T11359                                 
Name
(RefSeq) interstitial collagenase-like
  KO
K01388  matrix metalloproteinase-1 (interstitial collagenase) [EC:3.4.24.7]
Organism
game  Grus americana (Whooping crane)
Pathway
game03320  PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:game00001]
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    129200376
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:game01002]
    129200376
Enzymes [BR:game01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.24  Metalloendopeptidases
    3.4.24.7  interstitial collagenase
     129200376
Peptidases and inhibitors [BR:game01002]
 Metallo peptidases
  Family M10
   129200376
SSDB
Motif
Pfam: Peptidase_M10 Hemopexin PG_binding_1 Astacin Reprolysin_5 Reprolysin_3 Reprolysin_4 Peptidase_M54 DUF4953 Peptidase_M66 Peptidase_M57 Metallopep Reprolysin_2
Other DBs
NCBI-GeneID: 129200376
NCBI-ProteinID: XP_054667695
Position
1:204148726..204155872
AA seq 468 aa
MRMKSLSLLLLLYVAISSAFPVAPEAEDEEKTLQLVESYLQNFYDLQRDHQPHLRNKGEN
PLVAKLKEMQEFFGLKVTGKPDLETLDMMKKPRCGIPDIEQYVFTAGNPKWKRNNLTYRI
LNYTPKMRRADVEEAIRKAFSVWSNVTPLTFEKVEDKEADIMISFAYRDHRDNSPFDGPN
GQLAHAFQPGEGIGGDVHLDEEETWTKDGRGYNLFIVIAHELGHSLGLSHSNDPGALMYP
TYSYTDPNEFLLPQDDIDGIQAIYGQSNAAVQPTGPITPQACDPNLTFDAITTLRGEIIF
FKGRYMLRKHPARTETELNFISLFWPKLPSGIQAAYENIEKDEVLLFKEDKYWVLRGYDI
APGYPKPIYRLGFPKTVKRVNAAYTDETTGKTYFFTADRYWRYDENKKSMDHGYPRKIVS
HFGKIGRVDAAFQKDGYVYFFHGTTQFQFDPRAKRIVGQKKSISWFNC
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgaggatgaagagcctttcacttctcctgttgctgtacgtggccatctcttctgctttt
cctgtggctccagaagcagaagatgaagaaaaaaccctacagcttgtagagagttatcta
cagaatttctacgatcttcagagggatcaccagcctcatttaagaaacaaaggtgaaaat
ccccttgttgcaaagctcaaggaaatgcaagaattctttggactaaaagtgaccgggaaa
cctgatcttgagactttggacatgatgaaaaaacccagatgtggtatacctgatatagag
caatatgtgttcacagcagggaatcccaaatggaaaagaaataatctgacatacaggatt
ttgaattacaccccaaagatgagacgagctgatgtagaagaagcaatccgaaaagctttc
agtgtctggagcaacgtaacaccattgacattcgaaaaggttgaggacaaagaagcagat
ataatgatctcttttgcttatagagaccaccgagacaactctccttttgacggccccaat
gggcagctggctcatgctttccagcctggtgaaggtattggtggagatgtgcatcttgat
gaggaggaaacctggacaaaagatggaagaggctacaatttgttcattgttattgcccat
gagcttggccattcgctgggtctgtctcattcaaatgatcctggagcactgatgtatcca
acttactcctacacagaccccaatgaattcctccttcctcaggatgacattgatggcatt
caagccatctatggacagtccaatgctgctgtacagccaacaggacccataactccacag
gcttgtgacccaaatttgacatttgatgctatcactaccctacgtggagaaataatattc
ttcaagggcagatatatgctgcgcaaacatcctgcgaggacagagacagagctcaatttt
atctcactgttctggccaaagttaccatcaggaattcaagctgcttatgaaaacattgag
aaggatgaagttttactttttaaagaggataaatactgggttctcaggggatatgacatt
gcacctggctatcctaaaccaatctatcgtttgggattcccaaagactgttaaaagagtt
aatgcagcttacactgatgaaaccacaggaaaaacatacttctttacagctgacagatac
tggagatatgatgaaaacaaaaaatccatggatcatggttatcccaggaaaatagtctcc
cactttggaaaaattggcagagttgatgcagctttccagaaagatggctatgtctacttc
ttccatggaacaactcagttccagtttgatcctcgtgccaaacggattgtcggacaaaag
aagagcatcagctggtttaattgttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (17)   

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