KEGG   Pituophis catenifer annectens (San Diego gophersnake): 139316264
Entry
139316264         CDS       T11059                                 
Name
(RefSeq) interstitial collagenase-like
  KO
K01388  matrix metalloproteinase-1 (interstitial collagenase) [EC:3.4.24.7]
Organism
pcae  Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03320  PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:pcae00001]
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    139316264
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pcae01002]
    139316264
Enzymes [BR:pcae01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.24  Metalloendopeptidases
    3.4.24.7  interstitial collagenase
     139316264
Peptidases and inhibitors [BR:pcae01002]
 Metallo peptidases
  Family M10
   139316264
SSDB
Motif
Pfam: Peptidase_M10 Hemopexin PG_binding_1 Reprolysin_3 Reprolysin_5 DUF4953 Reprolysin_4
Other DBs
NCBI-GeneID: 139316264
NCBI-ProteinID: XP_070798985
Position
Unknown
AA seq 469 aa
MTGLSVWVFLFLACNLSAFATPVDSPINDADMDLVKKYLKTFYQSNDERSPKIRMDENEI
LTKDLKKMQEFFGLKVTGKPDLKTLAVMKKPRCGVPDLGSFVLSDGNPKWEKTSITYRIV
SYTSDMPQSDTDEAIRKAFEVWSNVSPLTFTRIYDGEADIMISFHTRDHGDNSPFDGPDG
ILAHAFQPGKHIGGDAHFDEEEFWTKDGPRGRNLFLVAAHEFGHSLGLSHSTDVGALMFP
NYSYTAPKLFRLPQDDINGIQAIYGKSESPIQPTGPSTPEACSAKTTFDAVTTMRGEYLF
FKDRHFWRKHPQLSNVELYFISLFWPTLPSSFDAAYENFEKDNVLIFKGNKYWVLSGYDV
IGQAQSIYRLGLPRNVKKIDAAFSDSETGKTYFFIGNKYWRYNEMEKSMEKGYPRNIAQD
FKGIKPRIDAALYENGYIYFFRGTKVFQFDPKNERIVRPIRRSNSWLNC
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgacaggactctcagtttgggtgttcctgtttctcgcctgcaacttatcggcttttgcc
actccagtggattcaccgatcaatgatgctgacatggatttagtgaagaaatacttaaag
accttctaccaatccaacgatgagagaagccctaagatccgtatggatgaaaatgaaatc
ttgactaaagatctcaaaaaaatgcaagaattttttggcctgaaagtgactggaaagcct
gacctgaaaactttggcagtgatgaagaagcccagatgtggtgtacctgacttggggtca
tttgttctttcagatggcaatcctaaatgggagaaaaccagtattacctacaggattgta
agctacacttcagatatgcctcaatctgatacagatgaagccatcagaaaagcatttgaa
gtctggagcaacgtgtcacctctaactttcacaagaatctatgatggtgaagccgatatc
atgatctctttccataccagagaccatggtgacaattctccatttgatggccctgatgga
atcctggcacatgcttttcaaccagggaaacacattggtggagatgctcattttgatgaa
gaagaattttggacaaaagatggcccaagaggccgcaacctatttcttgttgctgctcat
gagtttggccattcgttgggtctgtctcattccacggatgttggggccttgatgtttcct
aactactcctacacggcgccaaaattatttcgtcttccgcaggatgatatcaatggcatt
caagccatttacggaaaatcagaaagcccaatacaaccaacaggaccctctacaccagaa
gcatgctctgctaagactacttttgatgctgttaccaccatgcgtggagaatatttgttc
tttaaggacaggcacttttggcgtaagcaccctcagctgtccaatgtggaattgtatttc
atttctcttttctggccaactctgccttccagtttcgatgccgcttatgagaactttgag
aaagataacgttttaatttttaaaggaaacaaatattgggttctaagtggatatgatgtc
attggccaggctcaaagtatttacagattgggattaccaagaaatgtgaagaaaattgat
gctgcattcagcgattcggaaactgggaagacctattttttcattgggaacaaatattgg
agatacaatgaaatggaaaaaagcatggaaaaaggataccctagaaacatagcccaagat
tttaaagggattaaacccagaattgatgctgctttgtatgaaaatggatatatctatttc
ttccgaggaacaaaagtgtttcagtttgaccctaagaatgaaagaattgttcggcccatt
cgaagaagcaattcttggctgaactgttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (11)   

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