Parasphingorhabdus halotolerans: HF685_07650 Help Entry HF685_07650       CDS       T07423                                  Name (GenBank) CDC48 family AAA ATPase   KO K13525   transitional endoplasmic reticulum ATPase Organism phao  Parasphingorhabdus halotolerans Pathway phao04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:phao00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     HF685_07650  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:phao03019]     HF685_07650    03009 Ribosome biogenesis [BR:phao03009]     HF685_07650    04131 Membrane trafficking [BR:phao04131]     HF685_07650   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:phao04147]     HF685_07650 Messenger RNA biogenesis [BR:phao03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      HF685_07650 Ribosome biogenesis [BR:phao03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     HF685_07650 Membrane trafficking [BR:phao04131]  SNARE   SNARE associated proteins    Others     HF685_07650  Autophagy   Aggrephagy    Other aggrephagy associated proteins     HF685_07650 Exosome [BR:phao04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    HF685_07650 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_22 AAA_5 AAA_33 AAA_14 AAA_2 TIP49 IstB_IS21 AAA_28 nSTAND3 Zeta_toxin RNA_helicase NPHP3_N AAA_7 AAA_18 Sigma54_activat Mg_chelatase ABC_tran AAA_17 AAA_3 AAA_30 DUF815 TsaE AAA_11 Vps4_C AAA_24 Parvo_NS1 NB-ARC ATPase AAA_lid_PRS2_C AAA_25 Viral_helicase1 SLFN-g3_helicase Motif Other DBs NCBI-ProteinID:  QJB70741 UniProt:  A0A6H2DSK3 Position complement(1588161..1590446) Genome browser AA seq 761 aa AA seqDB search MIKLQVANARPEDSGRGLARLSRENLGKLGLIEGDVVEISGKRPTPARAVLPYPEDEGLD FARLDGLQRANAGVGSGDFVEIRKVDSKPAKKVVFAPAQKDLRLHGSGNGLKRSFMGRPV TAGDFVATHGQQQVDRGDMPPQLQQMLAAPAFSLQQIRLTVVSTSPKGVVHIDQDTEVEL RPEYEETTEHRRADVTYDDVGGLHETIDQLREMVELPLRYPQLFTRLGVDPPRGVLLHGP PGTGKTRLARAVANESDAEFFLINGPEIMGSAYGESEKKLREIFEEATKAAPSILFIDEI DSIAPKRGQVQGETEKRLVAQLLTLMDGLESRLNLVVIAATNRPEAIDEALRRPGRFDRE IVVGVPDIKGRKEILGIHTRGMPLEPAVDLQELARTTYGFVGADLAALTREAAIEAVRRI MPKLDLESETVPPEVLEELVVRRDDFVEALKRVQPSAMREVMVQAPDVRWEDIGGLDDAQ MRLKEGIELPMKNPEAFTRLGIRPAKGFLLYGPPGTGKTLLAKAVAREAEANFIATKSSD LLSKWYGESEQQIARLFARARQVAPTILFIDEIDSLVPARGGGMGEPQVTERVVNTILAE MDGLEEMQSVILIGATNRPGLVDPALLRPGRFDELIYVPVPGKAGRRRILAIHTSKMPMA KDVDLDDIAERAERYSGADLEDLVRRAGLYALREYGGLVETVSMKHFEKALKDSRASVTP EMEEEYSKMESELKQNAMRAEPIGFVSPGMLTPERGSKHGE NT seq 2286 nt NT seq  +upstreamnt  +downstreamnt atgataaaactgcaggttgccaacgcgcgaccggaagatagtggccgcggcttggcccga ttgtctcgggaaaaccttggcaaactcgggttgatcgagggtgacgttgtcgaaatatcc ggcaaacgccctacgcctgcacgggccgttcttccctatcccgaagatgaagggcttgat tttgcaaggcttgatggcttgcagcgcgcaaatgccggtgtgggctccggggatttcgtc gaaattcgcaaggtggattcgaaaccagcaaagaaagtggtgttcgccccggcgcaaaaa gacctgcgtctgcatggcagcgggaatggcttgaaacgaagctttatgggccggccggta accgctggtgattttgttgctactcacggccagcagcaagtcgatcgcggtgatatgccg ccccaacttcagcagatgcttgctgctccggcattttccctgcagcagatcaggttaacc gtggtgtcaacatctcccaaaggcgttgttcatatcgatcaggacaccgaggttgagtta cgcccggaatatgaagaaacaaccgaacaccgtcgcgcggatgtcacatatgatgatgtt ggtggattgcatgagacgattgatcagctgcgcgaaatggtcgagctgccactgcgttac ccgcaattattcacccggcttggcgttgatcccccgcgcggtgtgttgctccatggccct ccgggaacaggaaaaacccgccttgcccgcgcggttgcgaatgaaagcgacgctgaattt ttcctgatcaacggcccggaaatcatggggtccgcctacggcgagtcggagaaaaaactc cgcgagatttttgaagaagcgaccaaggctgcgccgtcgatcctgtttatcgacgagatc gactccatcgcgcccaaacgtggtcaggtgcaaggggaaaccgagaaacgtctggtcgcg caacttctgacccttatggacggactggagtcacggcttaatctggtcgttattgctgcc acaaaccggcctgaagccattgatgaggcattgcgccgtcccggccggtttgatcgtgaa atcgttgttggtgttcctgatataaaaggccgcaaagagatattgggcatccacacgcgg ggtatgccgctggaaccagcggttgatttgcaggagctggcgcgcacgacctatggtttt gtcggggctgatcttgccgctttgacgcgggaagcggcaatagaagccgtgcgacggatc atgcccaagctggatctggaatcagaaacggtgccgcccgaagtgcttgaagagcttgtc gttcggcgtgatgattttgttgaggcgcttaaacgcgtgcaaccatcggcgatgcgtgag gtgatggtgcaggcaccggacgttcgctgggaagacattggcgggcttgatgatgcgcag atgcgccttaaagagggcattgaattgccgatgaaaaacccggaagctttcacgcggctc ggaataagacccgctaagggatttctgctctatggccctccgggtacgggcaaaaccctg ctggccaaagcggttgcgcgcgaggcggaagcgaatttcattgcgaccaaatccagcgat ctgctttccaaatggtatggcgagagtgaacagcaaattgcccggctttttgcccgtgcg cgccaggtagcgccaactatcctgttcattgacgagattgatagtctggttccggcgcgt ggcggaggcatgggtgaaccgcaagtgactgagcgcgtggtcaatactattcttgcagaa atggacgggcttgaggaaatgcagtcggtaatattgatcggcgcgacgaaccgtcccggt ctggttgatccggcattgttgcggcccggccggtttgacgagctcatttacgtgccggtt ccggggaaagccggtcggcgcagaatattggccattcatacatcaaaaatgccgatggcg aaggatgtcgatctggatgatattgcggaacgagcggaaagatattcgggcgctgatctt gaagaccttgtacgccgggccgggctttatgcgctacgtgaatatggcggtttggtcgaa accgtgtcgatgaagcatttcgagaaagcgctaaaagacagtcgggcgtccgtcacgccg gaaatggaggaggaatactcgaaaatggaaagcgagctgaaacaaaacgcgatgcgcgcc gagcctattggttttgtttctccaggcatgctgacaccggaacggggcagcaagcatggt gagtga

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