KEGG   Phocoena sinus (vaquita): 116758693
Entry
116758693         CDS       T07759                                 
Symbol
MMP1
Name
(RefSeq) interstitial collagenase
  KO
K01388  matrix metalloproteinase-1 (interstitial collagenase) [EC:3.4.24.7]
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03320  PPAR signaling pathway
psiu04657  IL-17 signaling pathway
psiu04926  Relaxin signaling pathway
psiu05171  Coronavirus disease
psiu05200  Pathways in cancer
psiu05219  Bladder cancer
psiu05323  Rheumatoid arthritis
psiu05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09150 Organismal Systems
  09151 Immune system
   04657 IL-17 signaling pathway
    116758693 (MMP1)
  09152 Endocrine system
   03320 PPAR signaling pathway
    116758693 (MMP1)
   04926 Relaxin signaling pathway
    116758693 (MMP1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    116758693 (MMP1)
  09162 Cancer: specific types
   05219 Bladder cancer
    116758693 (MMP1)
  09172 Infectious disease: viral
   05171 Coronavirus disease
    116758693 (MMP1)
  09163 Immune disease
   05323 Rheumatoid arthritis
    116758693 (MMP1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    116758693 (MMP1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:psiu01002]
    116758693 (MMP1)
Enzymes [BR:psiu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.24  Metalloendopeptidases
    3.4.24.7  interstitial collagenase
     116758693 (MMP1)
Peptidases and inhibitors [BR:psiu01002]
 Metallo peptidases
  Family M10
   116758693 (MMP1)
SSDB
Motif
Pfam: Peptidase_M10 Hemopexin PG_binding_1 Reprolysin_5 Reprolysin_3 Reprolysin_4 DUF4953 Peptidase_M66 OGG_N Metallopep
Other DBs
NCBI-GeneID: 116758693
NCBI-ProteinID: XP_032497648
Ensembl: ENSPSNG00000011516
UniProt: A0A8C9BW35
Position
8:30406667..30414706
AA seq 470 aa
MPRLPLLLLLLLWGMGSHSFPAATSETQEQDVETVQKYLENYYNLKSDAKQVERQRNSDP
VVEKLKQMQKFFGLKVTGKPDAETLNVMKQPRCGVPDMAQFVLTQGNPQWEDTHLSYRIE
NYTPDLSRAAVDHAIEKAFQLWSSISPLTFTKVSEGQADIMISFVRGDHHDNSPFDGPGG
NLAHAFQPGPHIGGDVHFDEDERWTNNFRDYNLYRVAAHELGHSLGLAHSTDIGALMYPN
YIFSGDVQLSQDDISGIQAIYGPSQNPTQPTGPQTPQVCDSKLTFDAITTIRGEVMFFKD
RFYMRTNPFYPEAELNFISVFWPHLPNGLQAAYEVADRDEVRFFKGNKYWAVKGQDVLYG
YPKYIYRSFGFPRTVKNIDAAVSDEDTGKTYFFVANKCWRYDEYKQSMDAGYPKMIAEDF
PGIGNKVDAVFQKDGFFYFFRGTRQYKFDTKTKRILTLQKANSWFNCRKN
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgcccagactgcctttgctgctgctgctgcttctctggggcatggggtctcacagcttc
ccagcagcgacttcagaaacacaagagcaagatgtggagacagtgcagaaatacctggaa
aactactacaacctgaagagtgatgcgaagcaagttgaaagacagagaaacagtgaccca
gtagttgaaaaactaaagcaaatgcaaaagttctttgggctgaaggtgacggggaaacca
gatgctgaaaccctgaatgtgatgaagcagcccagatgtggtgtgcctgacatggctcag
tttgttctcactcagggaaacccgcaatgggaagacacacacctgtcctacaggattgaa
aactacacaccagatctgtcaagagcagctgtggaccatgccattgagaaagcctttcaa
ctctggagcagtatctcacccttgaccttcaccaaggtctctgagggtcaagcagacata
atgatatcctttgtcaggggagatcatcatgacaattctccctttgatggaccgggtgga
aacctcgctcatgcttttcaaccaggcccacatatcggaggggatgtccattttgatgaa
gatgaaaggtggaccaacaatttcagagattataacttgtatcgtgtggcagctcatgaa
ttgggccattcccttggacttgctcattctactgacattggggctttgatgtaccccaac
tacatcttcagtggtgatgttcagctatctcaggatgacatcagtgggatccaggccatc
tatggaccttcccaaaatcccactcagccaactggcccgcaaaccccacaagtgtgtgat
agtaagctaacttttgatgctataactacaatccggggagaagtgatgttctttaaagac
aggttctacatgcgcacaaatcccttctacccagaagctgagctcaatttcatttctgtt
ttctggccccatctgccaaatggacttcaggctgcttatgaggttgccgatagagatgaa
gttcggtttttcaaaggtaataagtactgggctgtcaaggggcaagatgtgttatacgga
taccccaagtacatctacagatcctttggtttcccgaggactgtgaagaacatcgacgct
gctgtttctgatgaagatactgggaaaacgtacttctttgttgctaacaagtgctggagg
tatgatgaatataaacaatccatggatgcaggttatcccaaaatgatagcagaagatttt
cctggaattggcaacaaagttgatgctgttttccagaaagacggatttttctatttcttc
cgtggaacaaggcaatacaaatttgataccaaaactaagagaattttgactctccaaaaa
gctaatagctggttcaactgcagaaaaaattga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (16)   

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