KEGG   Vicugna pacos (alpaca): 102528439
Entry
102528439         CDS       T08098                                 
Symbol
MMP1
Name
(RefSeq) interstitial collagenase
  KO
K01388  matrix metalloproteinase-1 (interstitial collagenase) [EC:3.4.24.7]
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03320  PPAR signaling pathway
vpc04657  IL-17 signaling pathway
vpc04926  Relaxin signaling pathway
vpc05171  Coronavirus disease
vpc05200  Pathways in cancer
vpc05219  Bladder cancer
vpc05323  Rheumatoid arthritis
vpc05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09150 Organismal Systems
  09151 Immune system
   04657 IL-17 signaling pathway
    102528439 (MMP1)
  09152 Endocrine system
   03320 PPAR signaling pathway
    102528439 (MMP1)
   04926 Relaxin signaling pathway
    102528439 (MMP1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102528439 (MMP1)
  09162 Cancer: specific types
   05219 Bladder cancer
    102528439 (MMP1)
  09172 Infectious disease: viral
   05171 Coronavirus disease
    102528439 (MMP1)
  09163 Immune disease
   05323 Rheumatoid arthritis
    102528439 (MMP1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    102528439 (MMP1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:vpc01002]
    102528439 (MMP1)
Enzymes [BR:vpc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.24  Metalloendopeptidases
    3.4.24.7  interstitial collagenase
     102528439 (MMP1)
Peptidases and inhibitors [BR:vpc01002]
 Metallo peptidases
  Family M10
   102528439 (MMP1)
SSDB
Motif
Pfam: Peptidase_M10 Hemopexin PG_binding_1 Reprolysin_5 Reprolysin_3 DUF4953 Peptidase_M54 Reprolysin_4 Peptidase_M66 Metallopep
Other DBs
NCBI-GeneID: 102528439
NCBI-ProteinID: XP_006206757
UniProt: A0A6I9IC48
Position
Unknown
AA seq 470 aa
MPSLSLLLLLLLWSSGAHGFPAATSETQERDVQIVQKYLENYYNLKSDGKQVEKQRNRNP
VVEKLKQMQKFFGLKVTGKPDAETLQVMEKPRCGVPDVAQFVLTQGNPRWERTNLTYRIE
NYTPDMARADVDHAIEKAFQLWSNASPLTFTRVFEGQADIMISFVRGDHRDNSPFDGPGG
MLAHAFQPGPGLGGDAHFDEDEMWTNNFRNYNLYRVAAHELGHSLGLSHSTDIGALMYPS
YIFSGDVQLSQDDIDGIQAIYGPSQNPTQPTGPQTPQACDSKLTFDAITTIRGEIMFLKD
RFYMRTNSFYPEVELNFISIFWPQLPNGLQAAYEVADRDEVRFFKGNKYWAVRGQNVLHG
YPKDIYRSFGFPRNVKNIDAAVSAEDTGKTYFFVANKCWRYDEYKRSMDAGYPKMIAEEF
PGIGNKVDAVFQKDGFFYFFRGTRQYKLDPRTKRILTLLKANSWFNCRKN
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgcccagcctctctctgctgctgctgctgctgctctggagttcaggggctcacggcttc
ccagcggcgacttcagaaacacaagagcgagatgtgcagatcgtgcagaaatacctggaa
aactactacaacctgaaaagtgacgggaagcaagttgaaaagcagagaaaccgtaaccca
gtcgttgaaaaactaaagcaaatgcaaaaattctttgggctgaaagtgactgggaaacca
gatgctgaaacgctgcaggtgatggagaagcccagatgtggggtgcctgacgtggctcag
tttgttctcactcaggggaaccctcggtgggagcgcacaaacctgacctacaggattgaa
aactacaccccagatatggcgagagcagatgtggaccacgccattgagaaggcctttcaa
ctctggagcaatgcctcgcccctgaccttcaccagggtctttgagggtcaagcggacatc
atgatatcctttgtcaggggagatcatcgtgacaattctccctttgacggacctggagga
atgctggctcatgctttccagccaggcccaggtcttggaggggatgctcattttgatgaa
gatgaaatgtggaccaacaatttcagaaattataacctgtaccgcgtggcagctcatgaa
ctgggccattcccttgggctttctcactccactgacatcggggctttgatgtatcccagc
tacatcttcagcggtgacgttcagctgtctcaggacgacattgatggcatccaggccatt
tacggaccttcccaaaatcccactcagcccactggcccacagaccccacaagcgtgtgac
agtaagctgacgtttgatgctataaccaccattcggggagaaatcatgttccttaaagac
aggttctacatgcgcacaaattccttctacccagaagtggagctcaatttcatttctatt
ttctggccacaactgccaaatggacttcaagctgcttacgaggtggctgacagggatgaa
gtccgctttttcaaaggtaataagtactgggctgtcagagggcagaatgtgctacacgga
taccccaaggacatctacaggtcctttggcttccctagaaatgtgaagaatatcgatgct
gctgtttcggcggaagatactgggaaaacgtacttctttgttgctaacaaatgctggagg
tatgatgagtataaaagatccatggatgcaggttatcccaaaatgatagcagaagagttt
cctggcattggcaacaaagttgacgctgtcttccagaaagatggatttttctatttcttt
cgtggaacaaggcaatacaaacttgatcccagaacaaagagaattttgactctcctaaaa
gctaacagctggttcaactgcagaaaaaattga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (15)   

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