KEGG   Xenopus laevis (African clawed frog): 495287
Entry
495287            CDS       T01010                                 
Symbol
mmp1.S, col4, mmp1, mmp18
Name
(RefSeq) matrix metalloproteinase-18 precursor
  KO
K01388  matrix metalloproteinase-1 (interstitial collagenase) [EC:3.4.24.7]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03320  PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:xla00001]
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    495287 (mmp1.S)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:xla01002]
    495287 (mmp1.S)
Enzymes [BR:xla01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.24  Metalloendopeptidases
    3.4.24.7  interstitial collagenase
     495287 (mmp1.S)
Peptidases and inhibitors [BR:xla01002]
 Metallo peptidases
  Family M10
   495287 (mmp1.S)
SSDB
Motif
Pfam: Peptidase_M10 Hemopexin PG_binding_1 Reprolysin_3 Reprolysin_5 Reprolysin_4 DUF4953 Peptidase_M54
Other DBs
NCBI-GeneID: 495287
NCBI-ProteinID: NP_001088423
Xenbase: XB-GENE-856365
UniProt: A0A8J0Q234 A2VD61
Position
2S:complement(151026048..151032069)
AA seq 467 aa
MNSLLLKLLLCVALTAAFPADKQDEPPATKEEMAENYLKRFYSLGTDGGPVGRKKHIQPF
TEKLQQMQKFFGLKVTGTLDPKTVEVMEKPRCGVYDVGQYSTVAKSSAWQKKDLTYRILN
FTPDLPQADVETAIQRAFKVWSDVTPLTFTRIYNEVSDIEISFTAGDHKDNSPFDGSGGI
LAHAFQPGNGIGGDAHFDEDETWTKTSEIYNLFLVAAHEFGHSLGLSHSTDQGALMYPTY
SNTDPKTFQLPQDDINAIQYLYGKSSNPVQPTGPSTPSRCDPNVVFNAVTTMRGELIFFV
KRFLWRKHPQASEAELMFVQAFWPSLPTNIDAAYENPITEQILVFKGSKYTALDGFDVVQ
GYPRNIYSLGFPKTVKRIDAAVHIEQLGKTYFFAAKKYWSYDEDKKQMDKGFPKQISNDF
PGIPDKIDAAFYYRDRLYFFIGRSQFEYNINSKRIVQVLRSNSWLGC
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgaacagcctcctgctaaagctgctactatgtgtagcccttaccgctgccttccccgca
gataaacaagatgagcccccagcaacaaaggaagaaatggcagagaattacttgaagaga
ttttacagtcttggaactgatgggggaccagttggaagaaagaaacacatccaacctttc
actgaaaagctccagcagatgcagaagttttttggcttaaaggtgacaggaacattggac
cccaagactgtagaagtaatggagaaacccagatgtggagtctatgatgttggccagtac
agcacagtcgcaaaaagttctgcatggcagaagaaggatctgacctacagaattctaaac
ttcactcctgacctgcctcaggctgatgtggagactgccatacaaagagctttcaaagtc
tggagtgacgtgacacctttgacctttaccagaatctacaatgaagtatcagatatagaa
atctcctttacagctggagatcacaaagacaattctccttttgatggatctggtggcatt
ttggcccatgcctttcagcccggcaatggcattggtggagatgcccattttgatgaagat
gaaacctggacaaagaccagtgaaatatacaatctgtttcttgttgctgctcatgaattt
ggacactcgctggggctttctcattccactgatcagggtgctttgatgtatccaacatac
tcaaataccgaccccaagacatttcagcttcctcaagatgatatcaatgctatacagtat
ctatatggaaaatcctccaatccagtccaaccaaccggaccatccactccttccagatgt
gatccaaatgttgttttcaatgctgtcaccaccatgagaggagaactgattttctttgtg
aagaggtttttatggaggaagcatccccaagcatccgaggctgaactcatgtttgttcaa
gcattctggccatcgctgcccactaatattgatgcggcgtatgaaaatcctataacggag
cagatccttgtgtttaaaggatcaaaatatacagctctggacggcttcgatgtagtacaa
ggttaccccaggaacatctacagcctgggatttccaaagaccgtgaaaagaattgatgcg
gctgttcatattgaacaactagggaaaacatatttctttgcagctaagaaatactggagt
tatgatgaagataaaaaacaaatggacaaaggctttccaaagcaaataagcaacgatttc
ccgggaattcctgataaaattgatgcagctttttattacagagaccgcctgtatttcttc
attggaaggagccagtttgaatacaatatcaactctaaaagaatcgtacaggtcttaaga
agcaacagctggttgggctgttaa

  All links  
Gene (12)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (8)   
   Pfam (8)   
All databases (30)   

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