ID or terms query

OC.312639 [Vibrio] (49 sequences)

OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3103 Vibrio_cholerae.2978 vch.2629 vch:VCA0104 ribosomal large subunit pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3103 Vibrio_cholerae.2978 vcf.111 vcf:IR04_00455 pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3103 Vibrio_cholerae.2978 vcs.2721 vcs:MS6_A0087 ribosomal large subunit pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3103 Vibrio_cholerae.2978 vce.3659 vce:Vch1786_II0899 ribosomal large subunit pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3103 Vibrio_cholerae.2978 vcq.800 vcq:EN18_04245 pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3103 Vibrio_cholerae.2978 vcj.185 vcj:VCD_000140 pseudouridylate synthase LSU rRNA-specific; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3103 Vibrio_cholerae.2978 vci.2737 vci:O3Y_13958 ribosomal large subunit pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.753669 Gammaproteobacteria.384564 Vibrio.19491 Vibrio_cholerae.4648 vco.121 vco:VC0395_0035 rluA-2; ribosomal large subunit pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3103 Vibrio_cholerae.2978 vcr.2859 vcr:VC395_A0097 rluA-2; ribosomal large subunit pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3103 Vibrio_cholerae.2978 vcm.2763 vcm:VCM66_A0102 rluA-2; ribosomal large subunit pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3103 Vibrio_cholerae.2978 vcl.2414 vcl:VCLMA_B0092 Pseudouridylate synthase, 23S RNA-specific; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3103 Vibrio_cholerae.2978 vcx.850 vcx:VAA049_1804 RNA pseudouridylate synthase family protein; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3103 Vibrio_cholerae.2978 vcz.3470 vcz:VAB027_925 RNA pseudouridylate synthase family protein; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101 Vibrio_vulnificus.2101 vvu.4061 vvu:VV2_1318 Pseudouridylate synthase, 23S RNA-specific; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101 Vibrio_vulnificus.2101 vvy.3355 vvy:VVA0154 pseudouridylate synthase, 23S RNA-specific; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101 Vibrio_vulnificus.2101 vvm.342 vvm:VVM_00306 -
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101 Vibrio_vulnificus.2101 vvl.3042 vvl:VV93_v1c31520 pseudouridylate synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101 Vibrio_parahaemolyticus.2098 vpa.3141 vpa:VPA0062 ribosomal large chain pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101 Vibrio_parahaemolyticus.4424 vpb.2894 vpb:VPBB_A0055 Ribosomal large subunit pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101 Vibrio_parahaemolyticus.4424 vpk.1535 vpk:M636_07790 pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101 Vibrio_parahaemolyticus.2098 vpf.3467 vpf:M634_18465 pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101 Vibrio_parahaemolyticus.4424 vph.2056 vph:VPUCM_20056 Ribosomal large subunit pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101 Vibrio_campbellii.2381 vha.5190 vha:VIBHAR_06934 hypothetical protein; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101 Vibrio_campbellii.2381 vca.3199 vca:M892_17990 ribosomal large subunit pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101   vag.3454 vag:N646_3516 putative ribosomal large chain pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101   vex.945 vex:VEA_000939 pseudouridylate synthase LSU rRNA-specific; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101   vdb.569 vdb:AL552_02915 RNA pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101   vhr.3566 vhr:AL538_18800 RluA family pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101   vna.3129 vna:PN96_16490 pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101   vow.5062 vow:A9237_26630 RNA pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101   vro.927 vro:BSZ04_04670 RNA pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.33773   vsp.3473 vsp:VS_II0554 Pseudouridylate synthase, 23S RNA-specific; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101   vsp.4075 vsp:VS_II1196 putative ribosomal large chain pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101   vej.3108 vej:VEJY3_15981 ribosomal large chain pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3102   vfu.4088 vfu:vfu_B01166 ribosomal large chain pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101   vni.4409 vni:VIBNI_B0947 putative Pseudouridine synthase related protein; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3102 Vibrio_anguillarum.2399 van.2610 van:VAA_02828 Hypothetical protein; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3102 Vibrio_anguillarum.2399 lag.3223 lag:N175_17320 pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3102 Vibrio_anguillarum.2399 vau.2746 vau:VANGNB10_cII0067c Putative RNA pseudouridylate synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101 Vibrio_coralliilyticus.269 vcy.3546 vcy:IX92_18645 pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101 Vibrio_coralliilyticus.269 vct.1257 vct:JV59_20395 pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101   vtu.3499 vtu:IX91_18600 pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3102   vfl.1340 vfl:AL536_06785 RluA family pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3103   vmi.438 vmi:AL543_02060 RluA family pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.641276 Gammaproteobacteria.82276 Vibrio.3104   vbr.1527 vbr:A6E01_07825 RNA pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3101   vsc.4072 vsc:VSVS12_04304 tRNA pseudouridine(32) synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3102   vqi.2575 vqi:CCZ37_13725 RNA pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82274 Vibrio.3102   vta.4892 vta:B1490 Pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
OC.312639 Bacteria.402840 Proteobacteria.345672 Gammaproteobacteria.82275 Vibrio.35464   vta.5171 vta:B1799 Pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

( plain text of OC.312639 [Vibrio] ) ( previous ver. )

Refinement of cluster

OC depth

KOs in cluster

    K06177 (48) tRNA pseudouridine32 synthase / 23S rRNA...

> Pathway search
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Organism selection


Distribution of taxonomic categories

sequence organism Vibrio KO

Neighbor clusters

OC.312541 (39) OC.312542 (293) OC.312543 (787) OC.312544-312569 OC.312570-312572 OC.312573-312574 OC.312575 (1) OC.312576-312634 OC.312635 (467) OC.312636 (46) OC.312637 (20) OC.312638 (113) OC.312639 (244) OC.312640 (1305) OC.312641 (24) OC.312642 (1384) OC.312643 (7) OC.312644 (2) OC.312645 (5) OC.312646-312654 OC.312655-312661 OC.312475-312540 OC.312646-312663