Malus domestica

Scientific NameMalus domestica [TAX:3750]
Lineagecellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Known viruses (13)
Scientific NameApple dimple fruit viroid [TAX:73494]
LineageViroids; Pospiviroidae; Apscaviroid
RefSeq
Apple dimple fruit viroid, complete genome.
Evidence RefSeq
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Scientific NameApple fruit crinkle viroid [TAX:190808]
LineageViroids; unclassified viroids
RefSeq
Apple fruit crinkle viroid, complete genome.
Evidence Literature
   Reference PMID: 18770018
      Authors Sano T, Isono S, Matsuki K, Kawaguchi-Ito Y, Tanaka K, Kondo K, Iijima A, Bar-Joseph M
      Title Vegetative propagation and its possible role as a genetic bottleneck in the shaping of the apple fruit crinkle viroid populations in apple and hop plants.
      Journal Virus Genes. 2008 Dec;37(3):298-303.
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Scientific NameApple geminivirus PL-2015 [TAX:1633752]
LineageViruses; ssDNA viruses; Geminiviridae; unclassified Geminiviridae
RefSeq
Apple geminivirus PL-2015 isolate China, complete genome.
Evidence RefSeq
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Scientific NameApple green crinkle associated virus [TAX:1211388]
LineageViruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales; Betaflexiviridae; Quinvirinae; Foveavirus; unclassified Foveavirus
RefSeq
Apple green crinkle associated virus complete genome, genomic RNA, isolate Aurora-1.
Evidence RefSeq
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Scientific NameApple hammerhead viroid-like circular RNA [TAX:1737346]
LineageViroids; unclassified viroids
RefSeq
Apple hammerhead viroid-like circular RNA, complete genome.
Evidence RefSeq
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Scientific NameApple latent spherical virus [TAX:101688]
LineageViruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; Secoviridae; Cheravirus
RefSeq
Apple latent spherical virus segment 1, complete sequence.
Apple latent spherical virus segment 2, complete sequence.
Evidence Literature
   Reference PMID: 10644854
      Authors Li C, Yoshikawa N, Takahashi T, Ito T, Yoshida K, Koganezawa H
      Title Nucleotide sequence and genome organization of apple latent spherical virus: a new virus classified into the family Comoviridae.
      Journal J Gen Virol. 2000 Feb;81(Pt 2):541-7.
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Scientific NameApple mosaic virus [TAX:12319]
LineageViruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae; Ilarvirus
RefSeq
Apple mosaic virus RNA 1 putative methyltransferase/helicase gene, complete cds.
Apple mosaic virus RNA 2 putative polymerase gene, complete cds.
Apple mosaic virus RNA 3, complete sequence.
Evidence RefSeq
Evidence Literature
   Reference PMID: 10640567
      Authors Shiel PJ, Berger PH
      Title The complete nucleotide sequence of apple mosaic virus (ApMV) RNA 1 and RNA 2: ApMV is more closely related to alfalfa mosaic virus than to other ilarviruses.
      Journal J Gen Virol. 2000 Jan;81(Pt 1):273-8.
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Descriptions of Plant Viruses:  

Scientific NameApple necrotic mosaic virus [TAX:1779339]
LineageViruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae; Ilarvirus; unclassified Ilarvirus
GenBank
Apple necrotic mosaic virus genomic RNA, segment RNA1, complete sequence.
Apple necrotic mosaic virus genomic RNA, segment RNA2, complete sequence.
Apple necrotic mosaic virus genomic RNA, segment RNA3, complete sequence.
Evidence GenBank

Scientific NameApple scar skin viroid [TAX:12895]
LineageViroids; Pospiviroidae; Apscaviroid
RefSeq
Apple scar skin viroid, complete genome.
Evidence Literature
   Reference PMID: 25962536
      Authors Khan S, Mackay J, Liefting L, Ward L
      Title Development of a duplex one-step RT-qPCR assay for the simultaneous detection of Apple scar skin viroid and plant RNA internal control.
      Journal J Virol Methods. 2015 Sep 1;221:100-5.
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Descriptions of Plant Viruses:  

Scientific NameApple scar skin viroid-C [TAX:325110]
LineageViroids; Pospiviroidae; Apscaviroid; Apple scar skin viroid
GenBank
Apple scar skin viroid-C isolate Liaoning, complete genome.
Evidence GenBank

Scientific NameCarnation mottle virus [TAX:11986]
LineageViruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Tombusviridae; Alphacarmovirus
RefSeq
Carnation mottle virus (CarMV) complete genomic RNA sequence.
Evidence UniProt
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Descriptions of Plant Viruses:  

Scientific NameCherry rasp leaf virus [TAX:202566]
LineageViruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; Secoviridae; Cheravirus
RefSeq
Cherry rasp leaf virus, complete genome.
Cherry rasp leaf virus RNA2, complete sequence.
Evidence UniProt
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Descriptions of Plant Viruses:  

Scientific NameTemperate fruit decay-associated virus [TAX:1628899]
LineageViruses; ssDNA viruses; unclassified ssDNA viruses
RefSeq
Temperate fruit decay-associated virus isolate MFB10, complete genome.
Evidence RefSeq
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