KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: kll00010 kll01200 kll01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: kll00010 kll01200 kll01230 kll01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: kll00010 kll00020 kll01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: kll00010 kll00020 kll00620 kll00785 kll01200 kll01210 kll01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: kll00020 kll01200 kll01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: kll00020 kll01200 kll01210 kll01230 kll01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: kll00020 kll01200 kll01210 kll01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: kll00030 kll01200 kll01100 kll01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: kll00030 kll01200 kll01100 kll01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: kll00030 kll01200 kll01230 kll01100 kll01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: kll00030 kll00230 kll01200 kll01230 kll01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: kll00030 kll01200 kll01100 kll01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:kll00040 kll00030 kll01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:kll00040 kll00030 kll01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:kll00052 kll01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:kll00052 kll01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:kll00053 kll01100 kll01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:kll00500 kll01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:kll00500 kll01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:kll00500 kll01100 kll01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:kll00520 kll01250 kll01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:kll00520 kll00052 kll01250 kll01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:kll00520 kll01250 kll01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:kll00520 kll01100]
M00012 Glyoxylate cycle [PATH:kll00630 kll01200 kll01100 kll01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: kll00730 kll01240 kll01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: kll00730 kll01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: kll00740 kll01240 kll01100 kll01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: kll00750 kll01240 kll01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: kll00760 kll01240 kll01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: kll00770 kll01240 kll01100 kll01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: kll00770 kll01240 kll01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: kll00780 kll01240 kll01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: kll00780 kll01240 kll01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: kll00785 kll01240 kll01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: kll00790 kll01240 kll01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: kll00860 kll01240 kll01100 kll01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: kll00860 kll01240 kll01100 kll01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: kll00860 kll01240 kll01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: kll00860 kll01240 kll01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: kll00130 kll01240 kll01100 kll01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: kll00130 kll01240 kll01100 kll01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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