KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:phyg00010 phyg01200 phyg01230 phyg01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:phyg00010 phyg00020 phyg01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:phyg00010 phyg00020 phyg00620 phyg00785 phyg01200 phyg01210 phyg01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:phyg00020 phyg01200 phyg01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:phyg00020 phyg01200 phyg01210 phyg01230 phyg01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:phyg00020 phyg01200 phyg01210 phyg01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:phyg00030 phyg01200 phyg01100 phyg01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:phyg00030 phyg01200 phyg01100 phyg01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:phyg00030 phyg01200 phyg01230 phyg01100 phyg01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:phyg00030 phyg00230 phyg01200 phyg01230 phyg01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:phyg00030 phyg01200 phyg01100 phyg01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:phyg00750 phyg01240 phyg01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:phyg00760 phyg01240 phyg01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:phyg00770 phyg01240 phyg01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:phyg00780 phyg01240 phyg01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:phyg00785 phyg01240 phyg01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:phyg00790 phyg00670 phyg01240 phyg01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:phyg00790 phyg01240 phyg01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:phyg00860 phyg01240 phyg01100 phyg01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:phyg00860 phyg01240 phyg01100 phyg01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:phyg00860 phyg01240 phyg01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:phyg00130 phyg01240 phyg01100 phyg01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00745 Imipenem resistance, repression of porin OprD
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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