| T number | T05128 |
| Org_code | cmag |
| Name | Pacificitalea manganoxidans DY25 |
| Category | Type strain |
| Annotation | yes |
| Taxonomy | TAX: 1411902 |
| Lineage | Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Pacificitalea |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
| Data source | GenBank (Assembly: GCA_002504165.1 Complete Genome)
BioProject: 387378 |
| Comment | Capable of oxidizing Mn(II) to form MnO2.
Isolated from the surface sediment near the polymetallic nodules of the CCFZ in the eastern equatorial Pacific Ocean.
|
| Chromosome | Circular |
| Sequence | GB: CP021404 |
| Length | 3308769 |
| Plasmid | pDY25-A; Circular |
| Sequence | GB: CP021405 |
| Length | 174678 |
| Plasmid | pDY25-B; Circular |
| Sequence | GB: CP021406 |
| Length | 178640 |
| Plasmid | pDY25-C; Circular |
| Sequence | GB: CP021407 |
| Length | 112508 |
| Plasmid | pDY25-D; Circular |
| Sequence | GB: CP021408 |
| Length | 55280 |
| Plasmid | pDY25-E; Circular |
| Sequence | GB: CP021409 |
| Length | 68016 |
| Plasmid | pDY25-F; Circular |
| Sequence | GB: CP021410 |
| Length | 42252 |
| Plasmid | pDY25-G; Circular |
| Sequence | GB: CP021411 |
| Length | 16653 |
| Statistics | Number of nucleotides: 3956796
Number of protein genes: 3524
Number of RNA genes: 57
|
| Created | 2017 |
| Reference | PMID: 31809796 |
| Authors | Wang X, Yu M, Wang L, Lin H, Li B, Xue CX, Sun H, Zhang XH |
| Title | Comparative genomic and metabolic analysis of manganese-oxidizing mechanisms in Celeribacter manganoxidans DY25(T): Its adaptation to the environment of polymetallic nodules. |
| Journal | Genomics 112:2080-2091 (2020)
DOI: 10.1016/j.ygeno.2019.12.002 |
Pacificitalea manganoxidans