T number | T05280 |
Org_code | fva |
Name | Fusobacterium varium Fv113-g1 |
Annotation | yes |
Taxonomy | TAX: 856 |
Lineage | Bacteria; Fusobacteriota; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium |
Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
Data source | GenBank (Assembly: GCA_002356455.1 Complete Genome) BioProject: 407612 |
Keywords | Human pathogen |
Disease | H01466 Ulcerative colitis |
Comment | Isolated from the colon mucus membrane of a patient with ulcerative colitis.
|
Chromosome | Circular |
Sequence | GB: AP017968 |
Length | 3965155 |
Plasmid | pFV113-g1-1; Circular |
Sequence | GB: AP017969 |
Length | 89623 |
Plasmid | pFV113-g1-2; Circular |
Sequence | GB: AP017970 |
Length | 68063 |
Statistics | Number of nucleotides: 4122841 Number of protein genes: 3686 Number of RNA genes: 81
|
Created | 2018 |
Reference | PMID: 29216329 |
Authors | Sekizuka T, Ogasawara Y, Ohkusa T, Kuroda M |
Title | Characterization of Fusobacterium varium Fv113-g1 isolated from a patient with ulcerative colitis based on complete genome sequence and transcriptome analysis. |
Journal | PLoS One 12:e0189319 (2017) DOI: 10.1371/journal.pone.0189319 |