| T number | T08173 |
| Org_code | bcoi |
| Name | Borrelia coriaceae Co53 |
| Category | Type strain |
| Annotation | yes |
| Taxonomy | TAX: 144 |
| Lineage | Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borrelia |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
| Data source | GenBank (Assembly: GCA_023035295.1 Complete Genome)
BioProject: 637792 |
| Keywords | Human pathogen |
| Disease | H00427 Relapsing fever |
| Comment | Soft tick-borne relapsing fever Borrelia species isolated in the Western Hemisphere.
Isolated from Ornithodoros coriaceus in California, USA.
|
| Chromosome | |
| Sequence | GB: CP075076 |
| Length | 920509 |
| Plasmid | cp29; Circular |
| Sequence | GB: CP075077 |
| Length | 29098 |
| Plasmid | cp30-1; Circular |
| Sequence | GB: CP075078 |
| Length | 30410 |
| Plasmid | cp30-2; Circular |
| Sequence | GB: CP075079 |
| Length | 29804 |
| Plasmid | cp30-3; Circular |
| Sequence | GB: CP075080 |
| Length | 30242 |
| Plasmid | cp48; Circular |
| Sequence | GB: CP075081 |
| Length | 48229 |
| Plasmid | lp11 |
| Sequence | GB: CP075082 |
| Length | 10596 |
| Plasmid | lp188 |
| Sequence | GB: CP075083 |
| Length | 188079 |
| Plasmid | lp20 |
| Sequence | GB: CP075084 |
| Length | 20414 |
| Plasmid | lp23 |
| Sequence | GB: CP075085 |
| Length | 22615 |
| Plasmid | lp24-1 |
| Sequence | GB: CP075086 |
| Length | 24381 |
| Plasmid | lp24-2 |
| Sequence | GB: CP075087 |
| Length | 23569 |
| Plasmid | lp28-1 |
| Sequence | GB: CP075088 |
| Length | 28073 |
| Plasmid | lp28-2 |
| Sequence | GB: CP075089 |
| Length | 27642 |
| Plasmid | lp29-1 |
| Sequence | GB: CP075090 |
| Length | 28973 |
| Plasmid | lp29-2 |
| Sequence | GB: CP075091 |
| Length | 28495 |
| Plasmid | lp30 |
| Sequence | GB: CP075092 |
| Length | 29837 |
| Plasmid | lp31 |
| Sequence | GB: CP075093 |
| Length | 30607 |
| Plasmid | lp32 |
| Sequence | GB: CP075094 |
| Length | 32427 |
| Plasmid | lp33 |
| Sequence | GB: CP075095 |
| Length | 32505 |
| Plasmid | lp34 |
| Sequence | GB: CP075096 |
| Length | 33856 |
| Plasmid | lp38 |
| Sequence | GB: CP075097 |
| Length | 38423 |
| Plasmid | lp39 |
| Sequence | GB: CP075098 |
| Length | 39066 |
| Plasmid | lp60 |
| Sequence | GB: CP075099 |
| Length | 59483 |
| Statistics | Number of nucleotides: 1787333
Number of protein genes: 1656
Number of RNA genes: 38
|
| Created | 2022 |
| Reference | PMID: 35641918 |
| Authors | Kneubehl AR, Krishnavajhala A, Leal SM, Replogle AJ, Kingry LC, Bermudez SE, Labruna MB, Lopez JE |
| Title | Comparative genomics of the Western Hemisphere soft tick-borne relapsing fever borreliae highlights extensive plasmid diversity. |
| Journal | BMC Genomics 23:410 (2022)
DOI: 10.1186/s12864-022-08523-7 |
Borrelia coriaceae