Nicotiana benthamiana

Nicotiana benthamiana

Scientific Name	Nicotiana benthamiana [TAX:4100]
Lineage	cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Known viruses (144)

Scientific Name	Abutilon Brazil virus [TAX:665102]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_014138 Abutilon Brazil virus DNA A segment, complete sequence. NC_014139 Abutilon Brazil virus DNA B segment, complete sequence.
Evidence	Literature
Reference	PMID: 20349251
Authors	Paprotka T, Metzler V, Jeske H
Title	The complete nucleotide sequence of a new bipartite begomovirus from Brazil infecting Abutilon.
Journal	Arch Virol. 2010 May;155(5):813-6.
DBLINKS	KEGG BRITE: NC_014138 NC_014139 ViralZone: genus, family

Scientific Name	Abutilon mosaic Brazil virus [TAX:1046572]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_016574 Abutilon mosaic Brazil virus DNA-A, complete genome. NC_016577 Abutilon mosaic Brazil virus DNA-B, complete genome.
Evidence	Literature
Reference	PMID: 20349251
Authors	Paprotka T, Metzler V, Jeske H
Title	The complete nucleotide sequence of a new bipartite begomovirus from Brazil infecting Abutilon.
Journal	Arch Virol. 2010 May;155(5):813-6.
DBLINKS	KEGG BRITE: NC_016574 NC_016577 ICTV: 202203177 ViralZone: genus, family

Scientific Name	Abutilon mosaic virus [TAX:10815]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_001928 Abutilon mosaic virus subgenome DNA A. NC_001929 Abutilon mosaic virus subgenome DNA B.
Evidence	Literature
Reference	PMID: 2219703
Authors	Frischmuth T, Zimmat G, Jeske H
Title	The nucleotide sequence of abutilon mosaic virus reveals prokaryotic as well as eukaryotic features.
Journal	Virology. 1990 Oct;178(2):461-8.
Comment	Vector: Bemisia tabaci Vector: Bemisia tabaci
DBLINKS	KEGG BRITE: NC_001928 NC_001929 ICTV: 202203178 ViralZone: genus, family Descriptions of Plant Viruses: 373

Scientific Name	Actinidia chlorotic ringspot-associated virus [TAX:1776763]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Fimoviridae; Emaravirus; Emaravirus actinidiae
RefSeq	NC_038769 Actinidia chlorotic ringspot associated virus isolate HN-6 segment RNA1 RNA-dependent RNA polymerase gene, complete cds. NC_038770 Actinidia chlorotic ringspot associated virus isolate HN-6 segment RNA2 glycoprotein precursor, gene, complete cds. NC_038771 Actinidia chlorotic ringspot associated virus isolate HN-6 segment RNA4 membrane-located protein gene, complete cds. NC_038772 Actinidia chlorotic ringspot associated virus isolate HN-6 segment RNA3 nucleocapsid protein gene, complete cds. NC_038773 Actinidia chlorotic ringspot associated virus isolate HN-6 segment RNA5 putative protein gene, complete cds.
Evidence	Literature
Reference	PMID: 27125218
Authors	Zheng Y, Navarro B, Wang G, Wang Y, Yang Z, Xu W, Zhu C, Wang L, Serio FD, Hong N
Title	Actinidia chlorotic ringspot-associated virus: a novel emaravirus infecting kiwifruit plants.
Journal	Mol Plant Pathol. 2017 May;18(4):569-581.
DBLINKS	KEGG BRITE: NC_038769 NC_038770 NC_038771 NC_038772 NC_038773 ViralZone: genus, family

Scientific Name	Adonis mosaic virus [TAX:1883104]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes; Tolivirales; Tombusviridae; Procedovirinae; Alphacarmovirus; Alphacarmovirus adonis
RefSeq	NC_040794 Adonis mosaic virus DNA, complete genome, isolate: HSP-2.
Evidence	Literature
Reference	PMID: 27738845
Authors	Yasaki M, Hirano Y, Uga H, Hanada K, Uehara-Ichiki T, Toda T, Furuya H, Fuji SI
Title	Characterization of a new carmovirus isolated from an Adonis plant.
Journal	Arch Virol. 2017 Feb;162(2):501-504.
DBLINKS	KEGG BRITE: NC_040794 ViralZone: family, genus

Scientific Name	Aeonium ringspot virus [TAX:1962503]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Comovirinae; Nepovirus; Nepovirus aeonii
RefSeq	NC_038761 Aeonium ringspot virus segment RNA2, complete sequence. NC_038762 Aeonium ringspot virus segment RNA1, complete sequence.
Evidence	Literature
Reference	PMID: 24012516
Authors	Sorrentino R, De Stradis A, Russo M, Alioto D, Rubino L
Title	Characterization of a putative novel nepovirus from Aeonium sp.
Journal	Virus Res. 2013 Nov 6;177(2):217-21.
DBLINKS	KEGG BRITE: NC_038761 NC_038762 ViralZone: genus, family

Scientific Name	African cassava mosaic virus-[Cameroon] [TAX:222064]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; African cassava mosaic virus
GenBank	AF112352 African cassava mosaic virus-[Cameroon] component A, complete sequence. AF112353 African cassava mosaic virus-[Cameroon] component B, complete sequence.
Evidence	Literature
Reference	PMID: 10640569
Authors	Fondong VN, Pita JS, Rey ME, de Kochko A, Beachy RN, Fauquet CM
Title	Evidence of synergism between African cassava mosaic virus and a new double-recombinant geminivirus infecting cassava in Cameroon.
Journal	J Gen Virol. 2000 Jan;81(Pt 1):287-97.
DBLINKS	ViralZone: genus, family

Scientific Name	Ageratum enation alphasatellite [TAX:1260769]
Lineage	Viruses; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite
RefSeq	NC_019547 Ageratum enation alphasatellite, complete genome.
Evidence	Literature
Reference	PMID: 23963765
Authors	Srivastava A, Raj SK, Kumar S, Snehi SK, Kulshreshtha A, Hallan V, Pande SS
Title	Molecular identification of Ageratum enation virus, betasatellite and alphasatellite molecules isolated from yellow vein diseased Amaranthus cruentus in India.
Journal	Virus Genes. 2013 Dec;47(3):584-90.
DBLINKS	KEGG BRITE: NC_019547 ICTV: 202205675 ViralZone: family

Scientific Name	Ageratum leaf curl betasatellite [TAX:1175505]
Lineage	Viruses; Tolecusatellitidae; Betasatellite; unclassified Betasatellite
RefSeq	NC_020889 Ageratum leaf curl betasatellite isolate Sikar M 2, complete sequence.
Evidence	Literature
Reference	PMID: 23636468
Authors	Marwal A, Sahu AK, Choudhary DK, Gaur RK
Title	Complete nucleotide sequence of a begomovirus associated with satellites molecules infecting a new host Tagetes patula in India.
Journal	Virus Genes. 2013 Aug;47(1):194-8.
DBLINKS	KEGG BRITE: NC_020889 ViralZone: family, genus

Scientific Name	Ageratum yellow vein Singapore alphasatellite [TAX:915293]
Lineage	Viruses; Alphasatellitidae; Geminialphasatellitinae; Ageyesisatellite
RefSeq	NC_003414 Ageratum yellow vein Singapore alphasatellite-[Singapore;1998], complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_003414 ICTV: 202206012 ViralZone: family

Scientific Name	Ageratum yellow vein Sri Lanka virus [TAX:222079]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_002981 Ageratum yellow vein Sri Lanka virus segment A, complete genome.
Evidence	Literature
Reference	PMID: 11853400
Authors	Saunders K, Salim N, Mali VR, Malathi VG, Briddon R, Markham PG, Stanley J
Title	Characterisation of Sri Lankan cassava mosaic virus and Indian cassava mosaic virus: evidence for acquisition of a DNA B component by a monopartite begomovirus.
Journal	Virology. 2002 Feb 1;293(1):63-74.
DBLINKS	KEGG BRITE: NC_002981 ICTV: 202203183 ViralZone: genus, family

Scientific Name	Ageratum yellow vein virus [TAX:44560]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_004626 Ageratum yellow vein virus, complete genome.
Evidence	Literature
Reference	PMID: 8847495
Authors	Tan PH, Wong SM, Wu M, Bedford ID, Saunders K, Stanley J
Title	Genome organization of ageratum yellow vein virus, a monopartite whitefly-transmitted geminivirus isolated from a common weed.
Journal	J Gen Virol. 1995 Dec;76 ( Pt 12):2915-22.
DBLINKS	KEGG BRITE: NC_004626 ICTV: 202203184 ViralZone: genus, family

Scientific Name	alfalfa-associated nucleorhabdovirus [TAX:2518374]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Betarhabdovirinae; Betanucleorhabdovirus; Betanucleorhabdovirus medicagonis
RefSeq	NC_076024 Alfalfa associated nucleorhabdovirus, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_076024 ViralZone: genus, family

Scientific Name	Alstroemeria necrotic streak virus [TAX:693450]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus; Orthotospovirus alstroemerinecrosis
RefSeq	NC_055297 Alstroemeria necrotic streak virus isolate San_Vicente3 segment M, complete sequence. NC_055298 Alstroemeria necrotic streak virus isolate San_Vicente3 segment L, complete sequence. NC_055299 Alstroemeria necrotic streak virus isolate San_Vicente3 segment S, complete sequence.
Evidence	Literature
Reference	Genome characterization of three Alstroemeria necrotic streak orthotospovirus (ANSV) isolates naturally infecting bell pepper (Capsicum annuum) in Antioquia (Colombia), Y Gallo, A Sierra, L Muñoz, M Marín… - Tropical Plant Pathology, 2019 - Springer
DBLINKS	KEGG BRITE: NC_055297 NC_055298 NC_055299 ViralZone: family, genus

Scientific Name	Alstroemeria yellow spot virus [TAX:2212644]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus; Orthotospovirus alstroemeriflavi
RefSeq	NC_040741 Alstroemeria yellow spot virus isolate Als-2000 segment S, complete sequence. NC_040742 Alstroemeria yellow spot virus isolate Als-2000 segment L, complete sequence. NC_040743 Alstroemeria yellow spot virus isolate Als-2000 segment M, complete sequence.
Evidence	Literature
Reference	PMID: 30288607
Authors	Hassani-Mehraban A, Dullemans AM, Verhoeven JTJ, Roenhorst JW, Peters D, van der Vlugt RAA, Kormelink R
Title	Alstroemeria yellow spot virus (AYSV): a new orthotospovirus species within a growing Eurasian clade.
Journal	Arch Virol. 2019 Jan;164(1):117-126.
DBLINKS	KEGG BRITE: NC_040741 NC_040742 NC_040743 ViralZone: family, genus

Scientific Name	Anagyris vein yellowing virus [TAX:312275]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Tymoviridae; Tymovirus; Tymovirus anagyris
RefSeq	NC_011559 Anagyris vein yellowing virus, complete genome.
Evidence	Literature
Reference	Rana, G. L., Castellano, M. A., & Koenig, R. (1988). Characterization of a tymovirus isolated from Anagyris foetida as a strain of scrophularia mottle virus. Journal of Phytopathology, 121(3), 239-249.
DBLINKS	KEGG BRITE: NC_011559 ViralZone: genus, family

Scientific Name	Ancient caribou feces associated virus [TAX:1542745]
Lineage	Viruses; unclassified viruses
RefSeq	NC_024907 Ancient caribou feces associated virus, complete genome.
Evidence	Literature
Reference	PMID: 25349412
Authors	Ng TF, Chen LF, Zhou Y, Shapiro B, Stiller M, Heintzman PD, Varsani A, Kondov NO, Wong W, Deng X, Andrews TD, Moorman BJ, Meulendyk T, MacKay G, Gilbertson RL, Delwart E
Title	Preservation of viral genomes in 700-y-old caribou feces from a subarctic ice patch.
Journal	Proc Natl Acad Sci U S A. 2014 Nov 25;111(47):16842-7.
Comment	Source of isolation: 700-y-old caribou feces frozen in a permanent ice patch
DBLINKS	KEGG BRITE: NC_024907

Scientific Name	Arracacha mottle virus [TAX:405558]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus
RefSeq	NC_018176 Arracacha mottle virus, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_018176 ICTV: 202204571 ViralZone: family, genus

Scientific Name	Asparagus virus 1 [TAX:443746]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus
RefSeq	NC_025821 Asparagus virus 1 isolate DSMZ PV-0954, complete genome.
Evidence	Literature
Reference	PMID: 25216774
Authors	Blockus S, Lesker T, Maiss E
Title	Complete genome sequences of two biologically distinct isolates of Asparagus virus 1.
Journal	Arch Virol. 2015 Feb;160(2):569-72.
DBLINKS	KEGG BRITE: NC_025821 ICTV: 202204572 ViralZone: family, genus

Scientific Name	Bean calico mosaic virus [TAX:31602]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_003504 Bean calico mosaic virus DNA A coat protein (AV1), replication enhancer protein (AC3), transcription activator protein (AC2), replication initiator protein (AC1), and AC4 (AC4) genes, complete cds. NC_003505 Bean calico mosaic virus DNA B, complete sequence.
Evidence	Literature
Reference	PMID: 18944770
Authors	Brown JK, Ostrow KM, Idris AM, Stenger DC
Title	Biotic, molecular, and phylogenetic characterization of bean calico mosaic virus, a distinct begomovirus species with affiliation in the squash leaf curl virus cluster.
Journal	Phytopathology. 1999 Apr;89(4):273-80.
DBLINKS	KEGG BRITE: NC_003504 NC_003505 KEGG GENOME: T40151 ICTV: 202203187 ViralZone: genus, family

Scientific Name	Bean latent virus [TAX:2703869]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_055589 Bean latent virus isolate Nayarit segment DNA-A, complete sequence. NC_060091 Bean latent virus isolate Nayarit segment DNA-B, complete sequence.
Evidence	Literature
Reference	PMID: 32405827
Authors	Martínez-Marrero N, Avalos-Calleros JA, Chiquito-Almanza E, Acosta-Gallegos JA, Ambriz-Granados S, Anaya-López JL, Argüello-Astorga GR
Title	A new begomovirus isolated from a potyvirus-infected bean plant causes asymptomatic infections in bean and N. benthamiana.
Journal	Arch Virol. 2020 Jul;165(7):1659-1665.
DBLINKS	KEGG BRITE: NC_055589 NC_060091 ICTV: 202209118 ViralZone: genus, family

Scientific Name	Bean yellow dwarf virus [TAX:57119]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Mastrevirus
RefSeq	NC_003493 Bean yellow dwarf virus putative genes V1, V2, C1, C1:C2.
Evidence	Literature
Reference	PMID: 9267015
Authors	Liu L, van Tonder T, Pietersen G, Davies JW, Stanley J
Title	Molecular characterization of a subgroup I geminivirus from a legume in South Africa.
Journal	J Gen Virol. 1997 Aug;78 ( Pt 8):2113-7.
DBLINKS	KEGG BRITE: NC_003493 ViralZone: genus, family

Scientific Name	Beet curly top Iran virus-[Siv] [TAX:1277443]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Becurtovirus; Beet curly top Iran virus
GenBank	JX082259 Beet curly top Iran virus-[Siv], complete genome.
Evidence	Literature
Reference	The unconventional geminivirus Beet curly top Iran virus: satisfying Koch's postulates and determining vector and host range, R Soleimani, S Matic, H Taheri… - Annals of Applied …, 2013 - Wiley Online Library
DBLINKS	ViralZone: genus, family

Scientific Name	Beet curly top virus - California [Logan/Arabidopsis] [TAX:268961]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Curtovirus; Beet curly top virus
GenBank	AF379637 Beet curly top virus - California [Logan/Arabidopsis], complete genome.
Evidence	Literature
Reference	PMID: 8460493
Authors	Hormuzdi SG, Bisaro DM
Title	Genetic analysis of beet curly top virus: evidence for three virion sense genes involved in movement and regulation of single- and double-stranded DNA levels.
Journal	Virology. 1993 Apr;193(2):900-9.
DBLINKS	ViralZone: genus, family

Scientific Name	Beet mild curly top virus - [Worland] [TAX:268956]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Curtovirus; Beet curly top virus
GenBank	U56975 Beet mild curly top virus - [Worland], complete genome.
Evidence	Literature
Reference	PMID: 2230726
Authors	Stenger DC, Carbonaro D, Duffus JE
Title	Genomic characterization of phenotypic variants of beet curly top virus.
Journal	J Gen Virol. 1990 Oct;71 ( Pt 10):2211-5.
DBLINKS	ViralZone: genus, family

Scientific Name	Beet pseudoyellows virus [TAX:72750]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Closteroviridae; Crinivirus
RefSeq	NC_005209 Beet pseudo-yellows virus RNA 1, complete genome. NC_005210 Beet pseudo-yellows virus RNA 2, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 15266105
Authors	Tzanetakis IE, Martin RR
Title	Complete nucleotide sequence of a strawberry isolate of Beet pseudoyellows virus.
Journal	Virus Genes. 2004 Apr;28(3):239-46.
Comment	Nicotiana benthamiana Vector: Trialeurodes vaporariorum
DBLINKS	KEGG BRITE: NC_005209 NC_005210 ICTV: 202203007 ViralZone: family, genus

Scientific Name	Bell pepper mottle virus [TAX:368735]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae; Tobamovirus
RefSeq	NC_009642 Bell pepper mottle tobamovirus, complete genome.
Evidence	Literature
Reference	PMID: 17334946
Authors	Rhie MJ, Min BE, Hong JS, Song YS, Ryu KH
Title	Complete genome sequence supports bell pepper mottle virus as a species of the genus Tobamovirus.
Journal	Arch Virol. 2007;152(7):1401-7.
Comment	Laboratory host: Nicotiana glutinosa, Nicotiana benthamiana
DBLINKS	KEGG BRITE: NC_009642 ICTV: 202205421 ViralZone: genus, family

Scientific Name	Black raspberry necrosis virus [TAX:367301]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Sadwavirus; Stramovirus; Sadwavirus rubi
RefSeq	NC_008182 Black raspberry necrosis virus RNA1, complete genome. NC_008183 Black raspberry necrosis virus RNA2, complete genome.
Evidence	Literature
Reference	PMID: 18942935
Authors	Halgren A, Tzanetakis IE, Martin RR
Title	Identification, Characterization, and Detection of Black raspberry necrosis virus.
Journal	Phytopathology. 2007 Jan;97(1):44-50.
DBLINKS	KEGG BRITE: NC_008182 NC_008183 KEGG GENOME: T40305 ViralZone: family, genus Plant Viruses Online: 100 Descriptions of Plant Viruses: 333

Scientific Name	Blackcurrant reversion virus satellite RNA [TAX:99930]
Lineage	Viruses; Satellites; RNA satellites; Single stranded RNA satellites; unclassified Single stranded RNA satellites
RefSeq	NC_003872 Blackcurrant reversion virus satellite RNA, complete genome.
Evidence	Literature
Reference	PMID: 10664405
Authors	Latvala-Kilby S, Lemmetty A, Lehto K
Title	Molecular characterization of a satellite RNA associated with blackcurrant reversion nepovirus.
Journal	Arch Virol. 2000;145(1):51-61.
DBLINKS	KEGG BRITE: NC_003872

Scientific Name	Blueberry latent spherical virus [TAX:1071488]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Comovirinae; Nepovirus; Nepovirus vaccinii
RefSeq	NC_038763 Blueberry latent spherical virus genomic RNA, segment: 2, complete sequence. NC_038764 Blueberry latent spherical virus genomic RNA, segment: 1, complete sequence.
Evidence	Literature
Reference	PMID: 22109710
Authors	Isogai M, Tatuto N, Ujiie C, Watanabe M, Yoshikawa N
Title	Identification and characterization of blueberry latent spherical virus, a new member of subgroup C in the genus Nepovirus.
Journal	Arch Virol. 2012 Feb;157(2):297-303.
DBLINKS	KEGG BRITE: NC_038763 NC_038764 ViralZone: genus, family

Scientific Name	Broad bean mottle virus [TAX:12301]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Bromoviridae; Bromovirus
RefSeq	NC_004006 Broad bean mottle virus RNA 3, complete sequence. NC_004007 Broad bean mottle virus RNA 2, complete sequence. NC_004008 Broad bean mottle virus RNA 1, complete sequence.
Evidence	Literature
Reference	Broad bean mottle virus: Identification, host range, serology, and occurrence on faba bean (Vicia faba) in West Asia and North Africa
DBLINKS	KEGG BRITE: NC_004006 NC_004007 NC_004008 KEGG GENOME: T40268 ICTV: 202202765 ViralZone: family, genus Descriptions of Plant Viruses: 101

Scientific Name	Calibrachoa mottle virus [TAX:204928]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes; Tolivirales; Tombusviridae; Procedovirinae; Alphacarmovirus; Alphacarmovirus calibrachoae
RefSeq	NC_021926 Calibrachoa mottle virus isolate California, complete genome.
Evidence	Literature
Reference	PMID: 30812922
Authors	Liu HY, Sears JL, Morrison RH
Title	Isolation and Characterization of a Carmo-like Virus from Calibrachoa Plants.
Journal	Plant Dis. 2003 Feb;87(2):167-171.
Evidence	Literature
Reference	PMID: 19914311
Authors	Gulati-Sakhuja A, Liu HY
Title	Complete nucleotide sequence and genome organization of Calibrachoa mottle virus (CbMV)--a new species in the genus Carmovirus of the family Tombusviridae.
Journal	Virus Res. 2010 Feb;147(2):216-23.
DBLINKS	KEGG BRITE: NC_021926 ViralZone: family, genus

Scientific Name	Capsicum chlorosis virus [TAX:163325]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus; Orthotospovirus capsiciflavi
RefSeq	NC_008301 Capsicum chlorosis virus segment S, complete sequence. NC_008302 Capsicum chlorosis virus segment L, complete sequence. NC_008303 Capsicum chlorosis virus segment M, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_008301 NC_008302 NC_008303 ViralZone: family, genus

Scientific Name	Caraway yellows virus [TAX:2530363]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Comovirinae; Nepovirus; Nepovirus cari
RefSeq	NC_078592 Caraway yellows virus isolate JKI 27894 segment RNA2, complete sequence. NC_078593 Caraway yellows virus isolate JKI 27894 segment RNA1, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_078592 NC_078593 ViralZone: genus, family

Scientific Name	Carnation vein mottle virus [TAX:82847]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus
GenBank	OM323987 Carnation vein mottle virus isolate DSMZ PV-0251 polyprotein gene, complete cds; and PIPO gene, partial cds.
Evidence	Literature
Reference	Detection of Important Viruses on Dianthus Caryophillus L. in Markazi Province, Iran, and Molecular Analysis of Carnation Vein Mottle Virus
DBLINKS	ICTV: 202204588 ViralZone: family, genus Descriptions of Plant Viruses: 78

Scientific Name	Carrot mottle mimic virus satellite RNA [TAX:570949]
Lineage	Viruses; Satellites; RNA satellites
RefSeq	NC_030648 Carrot mottle mimic virus satellite RNA, complete sequence.
Evidence	Literature
Reference	Isolation and characterization of novel temperate virus Aeropyrum globular virus 1 infecting hyperthermophilic archaeon Aeropyrum, M Yumiya, Y Fukuyama, Y Sako, T Yoshida - bioRxiv, 2021 -biorxiv.org
DBLINKS	KEGG BRITE: NC_030648

Scientific Name	Carrot mottle virus [TAX:68033]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes; Tolivirales; Tombusviridae; Calvusvirinae; Umbravirus; Umbravirus maculacarotae
RefSeq	NC_011515 Carrot mottle virus isolate Weddel, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_011515 KEGG GENOME: T40248 ViralZone: family, genus Descriptions of Plant Viruses: 137

Scientific Name	Carrot mottle virus satellite RNA [TAX:570950]
Lineage	Viruses; Satellites; RNA satellites
RefSeq	NC_030649 Carrot mottle virus satellite RNA, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 19020967
Authors	Menzel W, Maiss E, Vetten HJ
Title	Nucleotide sequence of a satellite RNA associated with carrot motley dwarf in parsley and carrot.
Journal	Virus Genes. 2009 Feb;38(1):187-8.
DBLINKS	KEGG BRITE: NC_030649

Scientific Name	Carrot necrotic dieback virus [TAX:680112]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Sequivirus; Sequivirus carotae
RefSeq	NC_038320 Carrot necrotic dieback virus strain Anthriscus, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 18982244
Authors	Menzel W, Vetten HJ
Title	Complete nucleotide sequence of an isolate of the Anthriscus strain of Parsnip yellow fleck virus.
Journal	Arch Virol. 2008;153(11):2173-5.
DBLINKS	KEGG BRITE: NC_038320 ViralZone: family, genus

Scientific Name	Cassava common mosaic virus [TAX:39046]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Alphaflexiviridae; Potexvirus
RefSeq	NC_001658 Cassava common mosaic virus, complete genome.
Evidence	Literature
Reference	PMID: 8601791
Authors	Calvert LA, Cuervo MI, Ospina MD, Fauquet CM, Ramirez BC
Title	Characterization of cassava common mosaic virus and a defective RNA species.
Journal	J Gen Virol. 1996 Mar;77 ( Pt 3):525-30.
DBLINKS	KEGG BRITE: NC_001658 KEGG GENOME: T40252 ICTV: 202202199 ViralZone: genus, family Descriptions of Plant Viruses: 90

Scientific Name	Cassava virus C [TAX:561576]
Lineage	Viruses; Riboviria; Orthornavirae; Lenarviricota; Miaviricetes; Ourlivirales; Botourmiaviridae; Ourmiavirus
RefSeq	NC_013111 Cassava virus C. NC_013112 Cassava virus C. NC_013113 Cassava virus C.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_013111 NC_013112 NC_013113 ICTV: 202205356 ViralZone: genus

Scientific Name	Cassia yellow blotch virus [TAX:300879]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Bromoviridae; Bromovirus
RefSeq	NC_006999 Cassia yellow blotch virus RNA1, complete sequence. NC_007000 Cassia yellow blotch virus RNA2, complete sequence. NC_007001 Cassia yellow blotch virus RNA3, complete sequence.
Evidence	Literature
Reference	PMID: 15770356
Authors	Iwahashi F, Fujisaki K, Kaido M, Okuno T, Mise K
Title	Synthesis of infectious in vitro transcripts from Cassia yellow blotch bromovirus cDNA clones and a reassortment analysis with other bromoviruses in protoplasts.
Journal	Arch Virol. 2005 Jul;150(7):1301-14.
Comment	Nicotiana benthamiana
DBLINKS	KEGG BRITE: NC_006999 NC_007000 NC_007001 ICTV: 202202767 ViralZone: family, genus Plant Viruses Online: 183 Descriptions of Plant Viruses: 334

Scientific Name	Chilli leaf curl India alphasatellite [TAX:1507725]
Lineage	Viruses; Alphasatellitidae; Geminialphasatellitinae; unclassified Begomovirus-associated alphasatellites
RefSeq	NC_027431 Chilli leaf curl India alphasatellite clone VIRO 391, complete sequence.
Evidence	Literature
Reference	PMID: 28062387
Authors	Vinoth Kumar R, Singh D, Singh AK, Chakraborty S
Title	Molecular diversity, recombination and population structure of alphasatellites associated with begomovirus disease complexes.
Journal	Infect Genet Evol. 2017 Apr;49:39-47.
DBLINKS	KEGG BRITE: NC_027431 ViralZone: family

Scientific Name	Chrysanthemum stem necrosis virus [TAX:83871]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus; Orthotospovirus chrysanthinecrocaulis
RefSeq	NC_027718 Chrysanthemum stem necrosis virus isolate PD4412741 segment L, complete sequence. NC_027719 Chrysanthemum stem necrosis virus isolate PD4412741 segment S, complete sequence. NC_027720 Chrysanthemum stem necrosis virus isolate PD4412741 segment M, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 25398595
Authors	Dullemans AM, Verhoeven JT, Kormelink R, van der Vlugt RA
Title	The complete nucleotide sequence of chrysanthemum stem necrosis virus.
Journal	Arch Virol. 2015 Feb;160(2):605-8.
DBLINKS	KEGG BRITE: NC_027718 NC_027719 NC_027720 ViralZone: family, genus

Scientific Name	Citrus variegation virus [TAX:37127]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Bromoviridae; Ilarvirus
RefSeq	NC_009536 Citrus variegation virus RNA 3, complete genome. NC_009537 Citrus variegation virus RNA1, complete sequence. NC_009538 Citrus variegation virus RNA2, complete sequence.
Evidence	Literature
Reference	PMID: 18074099
Authors	Li W, Adkins S, Hilf ME
Title	Characterization of complete sequences of RNA 1 and RNA 2 of citrus variegation virus.
Journal	Arch Virol. 2008;153(2):385-8.
Comment	Nicotiana benthamiana
DBLINKS	KEGG BRITE: NC_009536 NC_009537 NC_009538 KEGG GENOME: T40221 ICTV: 202202783 ViralZone: family, genus

Scientific Name	Cleome leaf crumple alphasatellite [TAX:2169824]
Lineage	Viruses; Alphasatellitidae; Geminialphasatellitinae; Clecrusatellite
RefSeq	NC_014646 Cleome leaf crumple virus associated DNA 1, complete genome.
Evidence	Literature
Reference	PMID: 20553707
Authors	Paprotka T, Metzler V, Jeske H
Title	The first DNA 1-like alpha satellites in association with New World begomoviruses in natural infections.
Journal	Virology. 2010 Sep 1;404(2):148-57.
DBLINKS	KEGG BRITE: NC_014646 ICTV: 202205666 ViralZone: family

Scientific Name	Coffee ringspot virus [TAX:745716]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Betarhabdovirinae; Dichorhavirus; Dichorhavirus coffeae
RefSeq	NC_038755 Coffee ringspot virus strain Lavras segment RNA2, complete sequence. NC_038756 Coffee ringspot virus strain Lavras segment RNA1, complete sequence.
Evidence	Literature
Reference	PMID: 25117897
Authors	Ramalho TO, Figueira AR, Sotero AJ, Wang R, Geraldino Duarte PS, Farman M, Goodin MM
Title	Characterization of Coffee ringspot virus-Lavras: a model for an emerging threat to coffee production and quality.
Journal	Virology. 2014 Sep;464-465:385-396.
DBLINKS	KEGG BRITE: NC_038755 NC_038756 ViralZone: genus, family

Scientific Name	Colombian potato soil-borne virus [TAX:1758139]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae; Pomovirus
RefSeq	NC_029034 Colombian potato soil-borne virus RNA 1, complete sequence. NC_029035 Colombian potato soil-borne virus RNA 2, complete sequence. NC_029037 Colombian potato soil-borne virus RNA 3, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27016929
Authors	Gil JF, Adams I, Boonham N, Nielsen SL, Nicolaisen M
Title	Molecular and biological characterisation of two novel pomo-like viruses associated with potato (Solanum tuberosum) fields in Colombia.
Journal	Arch Virol. 2016 Jun;161(6):1601-10.
DBLINKS	KEGG BRITE: NC_029034 NC_029035 NC_029037 ICTV: 202205418 ViralZone: genus, family

Scientific Name	Cucumber leaf spot virus [TAX:165432]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes; Tolivirales; Tombusviridae; Procedovirinae; Aureusvirus; Aureusvirus cucumis
RefSeq	NC_007816 Cucumber leaf spot virus, complete genome.
Evidence	Literature
Reference	PMID: 9453144
Authors	Miller JS, Damude H, Robbins MA, Reade RD, Rochon DM
Title	Genome structure of cucumber leaf spot virus: sequence analysis suggests it belongs to a distinct species within the Tombusviridae.
Journal	Virus Res. 1997 Nov;52(1):51-60.
Comment	Nicotiana benthamiana
DBLINKS	KEGG BRITE: NC_007816 ViralZone: genus, family Descriptions of Plant Viruses: 319

Scientific Name	Cymbidium ringspot virus [TAX:12144]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes; Tolivirales; Tombusviridae; Procedovirinae; Tombusvirus; Tombusvirus cymbidii
RefSeq	NC_003532 Cymbidium ringspot virus, complete genome.
Evidence	Literature
Reference	Gallitelli, D., Hull, R., & Koenig, R. (1985). Relationships among viruses in the tombusvirus group: nucleic acid hybridization studies. Journal of general virology, 66(7), 1523-1531.
Comment	N. benthamtana
DBLINKS	KEGG BRITE: NC_003532 ViralZone: family, genus Descriptions of Plant Viruses: 178

Scientific Name	Deltasatellite sat-603 [TAX:1890427]
Lineage	Viruses; Tolecusatellitidae; Deltasatellite; Tomato yellow leaf distortion deltasatellite 2
RefSeq	NC_043205 Deltasatellite sat-603 isolate 603N1, complete sequence.
Evidence	Literature
Reference	PMID: 27400152
Authors	Fiallo-Olivé E, Tovar R, Navas-Castillo J
Title	Deciphering the biology of deltasatellites from the New World: maintenance by New World begomoviruses and whitefly transmission.
Journal	New Phytol. 2016 Nov;212(3):680-692.
DBLINKS	KEGG BRITE: NC_043205 ViralZone: family, genus

Scientific Name	East African cassava mosaic Malawi virus [TAX:223264]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_022644 East African cassava mosaic Malawi virus clone EACMMV[MA:S8:07]B segment DNA-B, complete sequence. NC_022645 East African cassava mosaic Malawi virus clone EACMMV[MA:07:S4] AV2 (AV2), CP (AV1), REn (AC3), TrAP (AC2), and Rep genes, complete cds.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_022644 NC_022645 ICTV: 202203242 ViralZone: genus, family

Scientific Name	Eclipta yellow vein virus [TAX:875324]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_016660 Eclipta yellow vein virus clone EcYVV-[PK,Fai,06], complete genome. NC_075419 Eclipta yellow vein virus isolate WOK44 segment DNA A, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_016660 NC_075419 ICTV: 202206701 ViralZone: genus, family

Scientific Name	Emaravirus idaeobati [TAX:1980431]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Fimoviridae; Emaravirus
RefSeq	NC_029558 Raspberry leaf blotch virus segment RNA2, complete genome. NC_029559 Raspberry leaf blotch virus segment RNA3, complete genome. NC_029560 Raspberry leaf blotch virus segment RNA4, complete genome. NC_029561 Raspberry leaf blotch virus segment RNA5, complete genome. NC_029567 Raspberry leaf blotch virus segment RNA1, complete genome. NC_029571 Raspberry leaf blotch virus isolate Pittenweem segment RNA6, complete sequence. NC_029572 Raspberry leaf blotch virus isolate Pittenweem segment RNA7, complete sequence. NC_029573 Raspberry leaf blotch virus isolate Pittenweem segment RNA8, complete sequence.
Evidence	Literature
Reference	PMID: 22049090
Authors	McGavin WJ, Mitchell C, Cock PJ, Wright KM, MacFarlane SA
Title	Raspberry leaf blotch virus, a putative new member of the genus Emaravirus, encodes a novel genomic RNA.
Journal	J Gen Virol. 2012 Feb;93(Pt 2):430-7.
DBLINKS	KEGG BRITE: NC_029558 NC_029559 NC_029560 NC_029561 NC_029567 NC_029571 NC_029572 NC_029573 ICTV: 202200015 ViralZone: genus, family

Scientific Name	Epirus cherry virus [TAX:544686]
Lineage	Viruses; Riboviria; Orthornavirae; Lenarviricota; Miaviricetes; Ourlivirales; Botourmiaviridae; Ourmiavirus
RefSeq	NC_011065 Epirus cherry virus. NC_011066 Epirus cherry virus. NC_011067 Epirus cherry virus.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 19535502
Authors	Rastgou M, Habibi MK, Izadpanah K, Masenga V, Milne RG, Wolf YI, Koonin EV, Turina M
Title	Molecular characterization of the plant virus genus Ourmiavirus and evidence of inter-kingdom reassortment of viral genome segments as its possible route of origin.
Journal	J Gen Virol. 2009 Oct;90(Pt 10):2525-2535.
	Epirus Cherry Virus, an Unusual Virus Isolated from Cherry with Rasp‐Leaf Symptoms in Greece A Avgelis, M Barba, I Rumbos - Journal of Phytopathology, 1989 - Wiley Online Library
DBLINKS	KEGG BRITE: NC_011065 NC_011066 NC_011067 ICTV: 202205357 ViralZone: genus

Scientific Name	Ethiopian tobacco bushy top virus [TAX:1538549]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes; Tolivirales; Tombusviridae; Calvusvirinae; Umbravirus; Umbravirus ethiopiaense
RefSeq	NC_024808 Ethiopian tobacco bushy top virus isolate 18-2, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_024808 ViralZone: family, genus

Scientific Name	Eupatorium yellow vein betasatellite [TAX:221054]
Lineage	Viruses; Tolecusatellitidae; Betasatellite
RefSeq	NC_004515 Eupatorium yellow vein virus-associated DNA beta, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_004515 ICTV: 202205135 ViralZone: family, genus

Scientific Name	Eupatorium yellow vein virus-[SOJ3] [TAX:335404]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Eupatorium yellow vein mosaic virus
RefSeq	NC_038879 Eupatorium yellow vein virus-[SOJ3] complete genome, isolate Fukuoka-SOJ3.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_038879 ViralZone: genus, family

Scientific Name	Euphorbia yellow mosaic virus [TAX:598494]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_012553 Euphorbia yellow mosaic virus DNA A, complete genome. NC_012554 Euphorbia yellow mosaic virus DNA B, complete genome.
Evidence	Literature
Reference	PMID: 21779908
Authors	Fernandes FR, Albuquerque LC, de Oliveira CL, Cruz AR, da Rocha WB, Pereira TG, Naito FY, Dias Nde M, Nagata T, Faria JC, Zerbini FM, Aragão FJ, Inoue-Nagata AK
Title	Molecular and biological characterization of a new Brazilian begomovirus, euphorbia yellow mosaic virus (EuYMV), infecting Euphorbia heterophylla plants.
Journal	Arch Virol. 2011 Nov;156(11):2063-9.
DBLINKS	KEGG BRITE: NC_012553 NC_012554 ICTV: 202203252 ViralZone: genus, family

Scientific Name	Faba bean necrotic yellows C1 alphasatellite [TAX:1453080]
Lineage	Viruses; Alphasatellitidae; Nanoalphasatellitinae; unclassified Nanoalphasatellitinae
RefSeq	NC_024886 Faba bean necrotic yellows C1 alphasatellite gene for replicase.
Evidence	Literature
Reference	PMID: 7844570
Authors	Katul L, Maiss E, Vetten HJ
Title	Sequence analysis of a faba bean necrotic yellows virus DNA component containing a putative replicase gene.
Journal	J Gen Virol. 1995 Feb;76 ( Pt 2):475-9.
DBLINKS	KEGG BRITE: NC_024886 ViralZone: family

Scientific Name	Faba bean necrotic yellows C7 alphasatellite [TAX:1453082]
Lineage	Viruses; Alphasatellitidae; Nanoalphasatellitinae; unclassified Nanoalphasatellitinae
RefSeq	NC_003565 Faba bean necrotic yellows C7 alphasatellite C7-Eg gene, isolate Egyptian EV1-93.
Evidence	Literature
Reference	PMID: 7844570
Authors	Katul L, Maiss E, Vetten HJ
Title	Sequence analysis of a faba bean necrotic yellows virus DNA component containing a putative replicase gene.
Journal	J Gen Virol. 1995 Feb;76 ( Pt 2):475-9.
DBLINKS	KEGG BRITE: NC_003565 ViralZone: family

Scientific Name	Faba bean necrotic yellows C9 alphasatellite [TAX:1453083]
Lineage	Viruses; Alphasatellitidae; Nanoalphasatellitinae; Fabenesatellite; Faba bean necrotic yellows alphasatellite 2
RefSeq	NC_003567 Faba bean necrotic yellows C9 alphasatellite C9-Eg gene, isolate Egyptian EV1-93.
Evidence	Literature
Reference	PMID: 7844570
Authors	Katul L, Maiss E, Vetten HJ
Title	Sequence analysis of a faba bean necrotic yellows virus DNA component containing a putative replicase gene.
Journal	J Gen Virol. 1995 Feb;76 ( Pt 2):475-9.
DBLINKS	KEGG BRITE: NC_003567 ViralZone: family

Scientific Name	Frangipani mosaic virus [TAX:99585]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae; Tobamovirus
RefSeq	NC_014546 Frangipani mosaic virus, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_014546 ICTV: 202205428 ViralZone: genus, family Descriptions of Plant Viruses: 196

Scientific Name	Gaillardia latent virus [TAX:1468172]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus
RefSeq	NC_023892 Gaillardia latent virus isolate 5/18-05-2010, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_023892 ICTV: 202202248 ViralZone: family, genus

Scientific Name	Gomphocarpus mosaic virus [TAX:1972994]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus
RefSeq	NC_055470 Gomphocarpus mosaic virus genomic RNA, complete genome.
DBLINKS	KEGG BRITE: NC_055470 ICTV: 202207434 ViralZone: family, genus

Scientific Name	Grapevine virus A [TAX:35288]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Betaflexiviridae; Trivirinae; Vitivirus
RefSeq	NC_003604 Grapevine virus A, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 7944948
Authors	Minafra A, Saldarelli P, Grieco F, Martelli GP
Title	Nucleotide sequence of the 3' terminal region of the RNA of two filamentous grapevine viruses.
Journal	Arch Virol. 1994;137(3-4):249-61.
DBLINKS	KEGG BRITE: NC_003604 ICTV: 202202329 ViralZone: genus, family Plant Viruses Online: 373 Descriptions of Plant Viruses: 383

Scientific Name	Honeysuckle yellow vein mosaic disease associated satellite DNA beta [TAX:417192]
Lineage	Viruses; Tolecusatellitidae; Betasatellite; unclassified Betasatellite
RefSeq	NC_009571 Honeysuckle yellow vein mosaic disease associated satellite DNA beta-[Ibaraki], complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_009571 ViralZone: family, genus

Scientific Name	Honeysuckle yellow vein mosaic disease associated satellite DNA beta-[Nara] [TAX:417194]
Lineage	Viruses; Tolecusatellitidae; Betasatellite; unclassified Betasatellite; Honeysuckle yellow vein mosaic disease associated satellite DNA beta
RefSeq	NC_076104 Honeysuckle yellow vein mosaic disease associated satellite DNA beta-[Nara] DNA, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_076104 ViralZone: family, genus

Scientific Name	Indian cassava mosaic virus-[Maharashtra] [TAX:223281]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Indian cassava mosaic virus
GenBank	AJ314739 Indian cassava mosaic virus-[Maharashtra] DNA-A, complete genome, isolate ICMV-Mah. AJ314740 Indian cassava mosaic virus-[Maharashtra] DNA-B, complete genome, isolate ICMV-Mah.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Indian peanut clump virus [TAX:32629]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae; Pecluvirus
RefSeq	NC_004729 Indian peanut clump virus RNA 1, complete sequence.
Evidence	Literature
Reference	PMID: 9526538
Authors	Miller JS, Wesley SV, Naidu RA, Reddy DV, Mayo MA
Title	The nucleotide sequence of RNA-1 of Indian peanut clump furovius.
Journal	Arch Virol. 1996;141(12):2301-12.
DBLINKS	KEGG BRITE: NC_004729 ICTV: 202205412 ViralZone: genus, family Plant Viruses Online: 582

Scientific Name	Jatropha mosaic India virus-[Lucknow] [TAX:569949]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Jatropha mosaic India virus
RefSeq	NC_038449 Jatropha mosaic India virus-[Lucknow] strain SK-2 segment DNA-A, complete sequence.
Evidence	Literature
Reference	Biological Characterization and Complete Genome Sequence of a Possible Strain of Indian cassava mosaic virus from Jatropha curcas in India, SK Snehi, A Srivastava, SK Raj - Journal of Phytopathology, 2012 - Wiley Online Library
Comment	Vector: Bemisia tabaci
DBLINKS	KEGG BRITE: NC_038449 ViralZone: genus, family

Scientific Name	Konjac mosaic virus [TAX:322053]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus
RefSeq	NC_007913 Konjac mosaic virus, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_007913 ICTV: 202204630 ViralZone: family, genus

Scientific Name	Kyuri green mottle mosaic virus [TAX:111970]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae; Tobamovirus
RefSeq	NC_003610 Kyuri green mottle mosaic virus, complete genome.
Evidence	Literature
Reference	PMID: 11765913
Authors	Yoon JY, Min BE, Choi SH, Ryu KH
Title	Completion of nucleotide sequence and generation of highly infectious transcripts to cucurbits from full-length cDNA clone of Kyuri green mottle mosaic virus.
Journal	Arch Virol. 2001;146(11):2085-96.
Comment	Generation of biologically active in vitro transcripts of the virus and its infectivity for systemic host plants was confirmed.
DBLINKS	KEGG BRITE: NC_003610 ICTV: 202205431 ViralZone: genus, family

Scientific Name	Lettuce necrotic stunt virus [TAX:167947]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes; Tolivirales; Tombusviridae; Procedovirinae; Tombusvirus; Tombusvirus moroccoense; Moroccan pepper virus
GenBank	JN700748 Lettuce necrotic stunt virus isolate L2, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Lettuce yellow mottle virus [TAX:471285]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Betarhabdovirinae; Cytorhabdovirus; Cytorhabdovirus lactucamaculante
RefSeq	NC_011532 Lettuce yellow mottle virus, complete genome.
Evidence	Literature
Reference	PMID: 17943394
Authors	Heim F, Lot H, Delecolle B, Bassler A, Krczal G, Wetzel T
Title	Complete nucleotide sequence of a putative new cytorhabdovirus infecting lettuce.
Journal	Arch Virol. 2008;153(1):81-92.
DBLINKS	KEGG BRITE: NC_011532 ViralZone: genus, family

Scientific Name	Lolium latent virus [TAX:365150]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Alphaflexiviridae; Lolavirus
RefSeq	NC_010434 Lolium latent virus, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 18509590
Authors	Vaira AM, Maroon-Lango CJ, Hammond J
Title	Molecular characterization of Lolium latent virus, proposed type member of a new genus in the family Flexiviridae.
Journal	Arch Virol. 2008;153(7):1263-70.
DBLINKS	KEGG BRITE: NC_010434 ICTV: 202202186 ViralZone: genus, family

Scientific Name	Mediterranean ruda virus [TAX:2058620]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus
RefSeq	NC_043536 Mediterranean ruda virus isolate ParP17, complete genome.
Evidence	Literature
Reference	PMID: 29184567
Authors	Rodríguez-Nevado C, Montes N, Pagán I
Title	Ecological Factors Affecting Infection Risk and Population Genetic Diversity of a Novel Potyvirus in Its Native Wild Ecosystem.
Journal	Front Plant Sci. 2017;8:1958.
DBLINKS	KEGG BRITE: NC_043536 ICTV: 202206673 ViralZone: family, genus

Scientific Name	Melandrium yellow fleck virus [TAX:545259]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Bromoviridae; Bromovirus
RefSeq	NC_013266 Melandrium yellow fleck virus genomic RNA, segment RNA1, complete sequence, strain: KU1. NC_013267 Melandrium yellow fleck virus genomic RNA, segment RNA2, complete sequence, strain: KU1. NC_013268 Melandrium yellow fleck virus genomic RNA, segment RNA3, complete sequence, strain: KU1.
Evidence	Literature
Reference	PMID: 19597694
Authors	Narabayashi T, Iwahashi F, Kaido M, Okuno T, Mise K
Title	Melandrium yellow fleck bromovirus infects Arabidopsis thaliana and has genomic RNA sequence characteristics that are unique among bromoviruses.
Journal	Arch Virol. 2009;154(9):1381-9.
DBLINKS	KEGG BRITE: NC_013266 NC_013267 NC_013268 ICTV: 202202769 ViralZone: family, genus Descriptions of Plant Viruses: 236

Scientific Name	Melon chlorotic leaf curl virus-[Guatemala] [TAX:223286]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Melon chlorotic leaf curl virus
RefSeq	NC_004732 Melon chlorotic leaf curl virus-[Guatemala] component A, complete sequence. NC_028138 Melon chlorotic leaf curl virus-[Guatemala] nuclear shuttle protein (BV1) and movement protein (BC1) genes, complete cds.
Evidence	Literature
Reference	PMID: 18057231
Authors	Idris AM, Mills-Lujan K, Martin K, Brown JK
Title	Melon chlorotic leaf curl virus: characterization and differential reassortment with closest relatives reveal adaptive virulence in the squash leaf curl virus clade and host shifting by the host-restricted bean calico mosaic virus.
Journal	J Virol. 2008 Feb;82(4):1959-67.
DBLINKS	KEGG BRITE: NC_004732 NC_028138 ViralZone: genus, family

Scientific Name	Melon chlorotic spot virus [TAX:2479459]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Mechlorovirus; Mechlorovirus cucumeris
RefSeq	NC_040448 Melon chlorotic spot virus isolate E11-018 segment RNA3, complete sequence. NC_040449 Melon chlorotic spot virus isolate E11-018 segment RNA5, complete sequence. NC_040450 Melon chlorotic spot virus isolate E11-018 segment RNA1, complete sequence. NC_040451 Melon chlorotic spot virus isolate E11-018 segment RNA2, complete sequence. NC_040452 Melon chlorotic spot virus isolate E11-018 segment RNA6, complete sequence. NC_040453 Melon chlorotic spot virus isolate E11-018 segment RNA7, complete sequence. NC_040454 Melon chlorotic spot virus isolate E11-018 segment RNA4, complete sequence. NC_040455 Melon chlorotic spot virus isolate E11-018 segment RNA8, complete sequence.
Evidence	Literature
Reference	PMID: 30302581
Authors	Lecoq H, Wipf-Scheibel C, Verdin E, Desbiez C
Title	Characterization of the first tenuivirus naturally infecting dicotyledonous plants.
Journal	Arch Virol. 2019 Jan;164(1):297-301.
DBLINKS	KEGG BRITE: NC_040448 NC_040449 NC_040450 NC_040451 NC_040452 NC_040453 NC_040454 NC_040455 ViralZone: family

Scientific Name	Melon mild mottle virus [TAX:669377]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Comovirinae; Nepovirus; Nepovirus cucumis
RefSeq	NC_038765 Melon mild mottle virus gene for polyprotein, complete cds, segment RNA 1. NC_038766 Melon mild mottle virus gene for polyprotein, complete cds, segment RNA 2.
Evidence	Literature
Reference	PMID: 20955084
Authors	Tomitaka Y, Usugi T, Yasuda F, Okayama H, Tsuda S
Title	A novel member of the genus Nepovirus isolated from Cucumis melo in Japan.
Journal	Phytopathology. 2011 Mar;101(3):316-22.
DBLINKS	KEGG BRITE: NC_038765 NC_038766 ViralZone: genus, family

Scientific Name	melon severe mosaic virus [TAX:485724]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus; Orthotospovirus melotessellati
RefSeq	NC_033832 Melon severe mosaic tospovirus isolate VE440-A segment S, complete sequence. NC_033833 Melon severe mosaic tospovirus isolate VE440-A segment M, complete sequence. NC_033834 Melon severe mosaic tospovirus isolate VE440-A segment L, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 28155192
Authors	Ciuffo M, Nerva L, Turina M
Title	Full-length genome sequence of the tospovirus melon severe mosaic virus.
Journal	Arch Virol. 2017 May;162(5):1419-1422.
DBLINKS	KEGG BRITE: NC_033832 NC_033833 NC_033834 ViralZone: family, genus

Scientific Name	Melon yellow spot virus [TAX:89471]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus; Orthotospovirus meloflavi
RefSeq	NC_008300 Melon yellow spot virus segment S, complete sequence. NC_008306 Melon yellow spot virus segment L, complete sequence. NC_008307 Melon yellow spot virus segment M, complete sequence.
Evidence	Literature
Reference	Kato, K., Hanada, K., & Kameya Iwaki, M. (1999). Transmission mode, host range and electron microscopy of a pathogen causing a new disease of melon (Cucumis melo) in Japan. Annals of the Phytopathological Society of Japan (Japan). Kato, K., Hanada, K., & Kameya Iwaki, M. (1999). Transmission mode, host range and electron microscopy of a pathogen causing a new disease of melon (Cucumis melo) in Japan. Annals of the Phytopathological Society of Japan (Japan).
DBLINKS	KEGG BRITE: NC_008300 NC_008306 NC_008307 ViralZone: family, genus

Scientific Name	Moroccan pepper virus [TAX:208086]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes; Tolivirales; Tombusviridae; Procedovirinae; Tombusvirus; Tombusvirus moroccoense
RefSeq	NC_020073 Moroccan pepper virus isolate MPV-PM75, complete genome.
Evidence	Literature
Reference	PMID: 23360531
Authors	Wintermantel WM, Hladky LL
Title	Complete genome sequence and biological characterization of Moroccan pepper virus (MPV) and reclassification of Lettuce necrotic stunt virus as MPV.
Journal	Phytopathology. 2013 May;103(5):501-8.
DBLINKS	KEGG BRITE: NC_020073 ViralZone: family, genus Plant Viruses Online: 601

Scientific Name	Nanovirus-like particle [TAX:96892]
Lineage	Viruses; Alphasatellitidae; Geminialphasatellitinae; unclassified Begomovirus-associated alphasatellites
RefSeq	NC_039079 Nanovirus-like particle rep gene, isolate 1. NC_039080 Nanovirus-like particle rep gene for replication-associated protein. NC_039081 Nanovirus-like particle rep gene for replication associated protein, clone SB45-2.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_039079 NC_039080 NC_039081 ViralZone: family

Scientific Name	Neckar River virus [TAX:255520]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes; Tolivirales; Tombusviridae; Procedovirinae; Tombusvirus; Tombusvirus neckarfluminis
GenBank	MZ130936 Neckar River virus isolate DSMZ PV-0270, complete genome.
Evidence	Literature
Reference	PMID: 37985520
Authors	Tran TC, Maiss E, Rose H
Title	The complete genome sequence of Neckar River virus confirms it to be a distinct member of the genus Tombusvirus in the family Tombusviridae.
Journal	Arch Virol. 2023 Nov 20;168(12):296.
DBLINKS	ViralZone: family, genus

Scientific Name	Nemesia ring necrosis virus [TAX:312009]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Tymoviridae; Tymovirus; Tymovirus nemesiae
RefSeq	NC_011538 Nemesia ring necrosis virus, complete genome.
Evidence	Literature
Reference	PMID: 15883655
Authors	Koenig R, Pleij CW, Lesemann DE, Loss S, Vetten HJ
Title	Molecular characterization of isolates of anagyris vein yellowing virus, plantago mottle virus and scrophularia mottle virus -- comparison of various approaches for tymovirus classification.
Journal	Arch Virol. 2005 Nov;150(11):2325-38.
DBLINKS	KEGG BRITE: NC_011538 ViralZone: genus, family

Scientific Name	Okra mosaic virus [TAX:70822]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Tymoviridae; Tymovirus; Tymovirus abelmoschi
RefSeq	NC_009532 Okra mosaic virus, complete genome.
Evidence	Literature
Reference	PMID: 18049886
Authors	Stephan D, Siddiqua M, Ta Hoang A, Engelmann J, Winter S, Maiss E
Title	Complete nucleotide sequence and experimental host range of Okra mosaic virus.
Journal	Virus Genes. 2008 Feb;36(1):231-40.
DBLINKS	KEGG BRITE: NC_009532 ViralZone: genus, family Descriptions of Plant Viruses: 128

Scientific Name	Olive latent virus 1 [TAX:47669]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes; Tolivirales; Tombusviridae; Procedovirinae; Alphanecrovirus; Alphanecrovirus oleae
RefSeq	NC_001721 Olive latent virus 1, complete genome.
Evidence	Literature
Reference	PMID: 8678829
Authors	Grieco F, Savino V, Martelli GP
Title	Nucleotide sequence of the genome of a citrus isolate of olive latent virus 1.
Journal	Arch Virol. 1996;141(5):825-38.
Comment	N. benthamiana
DBLINKS	KEGG BRITE: NC_001721 ViralZone: family, genus

Scientific Name	Olive latent virus 2 [TAX:33773]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Bromoviridae; Oleavirus
RefSeq	NC_003671 Olive latent virus 2 RNA 3, complete sequence. NC_003673 Olive latent virus 2 RNA 1, complete sequence. NC_003674 Olive latent virus 2 RNA 2, complete sequence.
Evidence	Literature
Reference	PMID: 8887501
Authors	Grieco F, Dell'Orco M, Martelli GP
Title	The nucleotide sequence of RNA1 and RNA2 of olive latent virus 2 and its relationships in the family Bromoviridae.
Journal	J Gen Virol. 1996 Oct;77 ( Pt 10):2637-44.
DBLINKS	KEGG BRITE: NC_003671 NC_003673 NC_003674 ICTV: 202202797 ViralZone: family, genus Descriptions of Plant Viruses: 384

Scientific Name	Ourmia melon virus [TAX:186786]
Lineage	Viruses; Riboviria; Orthornavirae; Lenarviricota; Miaviricetes; Ourlivirales; Botourmiaviridae; Ourmiavirus
RefSeq	NC_011068 Ourmia melon virus. NC_011069 Ourmia melon virus. NC_011070 Ourmia melon virus.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 19535502
Authors	Rastgou M, Habibi MK, Izadpanah K, Masenga V, Milne RG, Wolf YI, Koonin EV, Turina M
Title	Molecular characterization of the plant virus genus Ourmiavirus and evidence of inter-kingdom reassortment of viral genome segments as its possible route of origin.
Journal	J Gen Virol. 2009 Oct;90(Pt 10):2525-2535.
Comment	Laboratory host: Nicotiana benthamiana
DBLINKS	KEGG BRITE: NC_011068 NC_011069 NC_011070 ICTV: 202205358 ViralZone: genus Plant Viruses Online: 488

Scientific Name	Peanut stripe virus [TAX:28353]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus; Bean common mosaic virus
GenBank	U05771 Peanut stripe virus, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus Plant Viruses Online: 068

Scientific Name	Pepino mosaic virus [TAX:112229]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Alphaflexiviridae; Potexvirus
RefSeq	NC_004067 Pepino mosaic virus, complete genome.
Evidence	Literature
Reference	PMID: 12376761
Authors	Aguilar JM, Hernández-Gallardo MD, Cenis JL, Lacasa A, Aranda MA
Title	Complete sequence of the Pepino mosaic virus RNA genome.
Journal	Arch Virol. 2002 Oct;147(10):2009-15.
DBLINKS	KEGG BRITE: NC_004067 KEGG GENOME: T40131 ICTV: 202202215 ViralZone: genus, family Descriptions of Plant Viruses: 350, 411

Scientific Name	Pepper chlorotic spot virus [TAX:1414655]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus; Orthotospovirus capsicimaculaflavi
RefSeq	NC_033772 Pepper chlorotic spot virus isolate 14YV733 segment S, complete sequence. NC_033773 Pepper chlorotic spot virus isolate 14YV733 segment M, complete sequence. NC_033774 Pepper chlorotic spot virus isolate 14YV733 segment L, complete sequence.
Evidence	Literature
Reference	PMID: 28526964
Authors	Zheng K, Chen TC, Yeh SD, Rahman MS, Su X, Wu K, Li T, Zhang Z, Dong J
Title	Characterization of a new isolate of pepper chlorotic spot virus from Yunnan province, China.
Journal	Arch Virol. 2017 Sep;162(9):2809-2814.
DBLINKS	KEGG BRITE: NC_033772 NC_033773 NC_033774 ViralZone: family, genus

Scientific Name	Pepper golden mosaic virus [TAX:223301]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_004096 Pepper golden mosaic virus DNA B, complete sequence. NC_004101 Pepper golden mosaic virus DNA A, complete sequence.
Evidence	Literature
Reference	PMID: 18944336
Authors	Méndez-Lozano J, Torres-Pacheco I, Fauquet CM, Rivera-Bustamante RF
Title	Interactions Between Geminiviruses in a Naturally Occurring Mixture: Pepper huasteco virus and Pepper golden mosaic virus.
Journal	Phytopathology. 2003 Mar;93(3):270-7.
DBLINKS	KEGG BRITE: NC_004096 NC_004101 ICTV: 202203306 ViralZone: genus, family

Scientific Name	Pepper leaf curl virus isolate Varanasi [TAX:436241]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Pepper leaf curl virus
GenBank	EF190217 Pepper leaf curl virus isolate Varanasi, complete genome.
Evidence	Literature
Reference	PMID: 18175042
Authors	Chattopadhyay B, Singh AK, Yadav T, Fauquet CM, Sarin NB, Chakraborty S
Title	Infectivity of the cloned components of a begomovirus: DNA beta complex causing chilli leaf curl disease in India.
Journal	Arch Virol. 2008;153(3):533-9.
DBLINKS	ViralZone: genus, family

Scientific Name	Pepper leaf curl virus satellite DNA beta [TAX:436242]
Lineage	Viruses; Tolecusatellitidae; Betasatellite; unclassified Betasatellite
RefSeq	NC_010235 Pepper leaf curl virus satellite DNA beta, complete genome.
Evidence	Literature
Reference	PMID: 18175042
Authors	Chattopadhyay B, Singh AK, Yadav T, Fauquet CM, Sarin NB, Chakraborty S
Title	Infectivity of the cloned components of a begomovirus: DNA beta complex causing chilli leaf curl disease in India.
Journal	Arch Virol. 2008;153(3):533-9.
DBLINKS	KEGG BRITE: NC_010235 ViralZone: family, genus

Scientific Name	Pepper veinal mottle virus [TAX:255066]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus
RefSeq	NC_011918 Pepper veinal mottle virus, complete genome.
Evidence	Literature
Reference	PMID: 18998046
Authors	Ha JH, Hong JS, Kim TS, Ryu KH
Title	Complete genome sequence of an isolate of Pepper veinal mottle virus and phylogenetic relationship with other potyviruses.
Journal	Arch Virol. 2008;153(12):2315-8.
DBLINKS	KEGG BRITE: NC_011918 KEGG GENOME: T40324 ICTV: 202204661 ViralZone: family, genus Descriptions of Plant Viruses: 104

Scientific Name	Pepper yellow leaf curl Indonesia virus [TAX:292477]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_008283 Pepper yellow leaf curl Indonesia virus DNA-A, complete genome. NC_008284 Pepper yellow leaf curl Indonesia virus DNA-B, complete genome.
Evidence	Literature
Reference	PMID: 19015934
Authors	Sakata JJ, Shibuya Y, Sharma P, Ikegami M
Title	Strains of a new bipartite begomovirus, pepper yellow leaf curl Indonesia virus, in leaf-curl-diseased tomato and yellow-vein-diseased ageratum in Indonesia.
Journal	Arch Virol. 2008;153(12):2307-13.
DBLINKS	KEGG BRITE: NC_008283 NC_008284 ICTV: 202203312 ViralZone: genus, family

Scientific Name	Pepper yellow vein Mali virus [TAX:260378]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_005347 Pepper yellow vein Mali virus, complete genome.
Evidence	Literature
Reference	PMID: 18278427
Authors	Zhou YC, Noussourou M, Kon T, Rojas MR, Jiang H, Chen LF, Gamby K, Foster R, Gilbertson RL
Title	Evidence of local evolution of tomato-infecting begomovirus species in West Africa: characterization of tomato leaf curl Mali virus and tomato yellow leaf crumple virus from Mali.
Journal	Arch Virol. 2008;153(4):693-706.
DBLINKS	KEGG BRITE: NC_005347 ICTV: 202203314 ViralZone: genus, family

Scientific Name	Poinsettia mosaic virus [TAX:113553]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Tymoviridae
RefSeq	NC_002164 Poinsettia mosaic virus, complete genome.
Evidence	Literature
Reference	PMID: 10860883
Authors	Bradel BG, Preil W, Jeske H
Title	Sequence analysis and genome organisation of poinsettia mosaic virus (PnMV) reveal closer relationship to marafiviruses than to tymoviruses.
Journal	Virology. 2000 Jun 5;271(2):289-97.
DBLINKS	KEGG BRITE: NC_002164 KEGG GENOME: T40278 ICTV: 202202385 ViralZone: family Descriptions of Plant Viruses: 311

Scientific Name	Potato virus B [TAX:2340870]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Comovirinae; Nepovirus; Nepovirus betasolani
RefSeq	NC_018667 Potato virus B, complete genome. NC_043447 Potato virus B isolate Pasco-01 segment RNA1, complete sequence. NC_043448 Potato virus B isolate Pasco-01 segment RNA2, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_018667 NC_043447 NC_043448 ViralZone: genus, family

Scientific Name	Potato yellow dwarf virus [TAX:195060]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Betarhabdovirinae; Alphanucleorhabdovirus; Alphanucleorhabdovirus tuberosum
RefSeq	NC_016136 Potato yellow dwarf virus, complete genome. NC_076163 Potato yellow dwarf nucleorhabdovirus strain CYDV-constricta, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 18387687
Authors	Ghosh D, Brooks RE, Wang R, Lesnaw J, Goodin MM
Title	Cloning and subcellular localization of the phosphoprotein and nucleocapsid proteins of Potato yellow dwarf virus, type species of the genus Nucleorhabdovirus.
Journal	Virus Res. 2008 Jul;135(1):26-35.
DBLINKS	KEGG BRITE: NC_016136 NC_076163 KEGG GENOME: T40282 ViralZone: family, genus Descriptions of Plant Viruses: 35

Scientific Name	Pothos latent virus [TAX:44562]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes; Tolivirales; Tombusviridae; Procedovirinae; Aureusvirus; Aureusvirus aurei
RefSeq	NC_000939 Pothos latent virus genes for replicase, capsid protein and movement protein.
Evidence	Literature
Reference	PMID: 7595391
Authors	Rubino L, Russo M, Martelli GP
Title	Sequence analysis of pothos latent virus genomic RNA.
Journal	J Gen Virol. 1995 Nov;76 ( Pt 11):2835-9.
Comment	Nicotiana benthamiana
DBLINKS	KEGG BRITE: NC_000939 ViralZone: genus, family Descriptions of Plant Viruses: 403

Scientific Name	Rattail cactus necrosis-associated virus [TAX:1123754]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae; Tobamovirus
RefSeq	NC_016442 Rattail cactus necrosis associated virus, complete genome.
Evidence	Literature
Reference	PMID: 22006045
Authors	Kim NR, Hong JS, Song YS, Chung BN, Park JW, Ryu KH
Title	The complete genome sequence of a member of a new species of tobamovirus (rattail cactus necrosis-associated virus) isolated from Aporcactus flagelliformis.
Journal	Arch Virol. 2012 Jan;157(1):185-7.
DBLINKS	KEGG BRITE: NC_016442 ICTV: 202205439 ViralZone: genus, family

Scientific Name	Rose leaf curl betasatellite [TAX:875325]
Lineage	Viruses; Tolecusatellitidae; Betasatellite
RefSeq	NC_024695 Rose leaf curl betasatellite isolate AS23, complete sequence. NC_074990 Rose leaf curl betasatellite clone EcYVB-[PK,Fai,06], complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_024695 NC_074990 ICTV: 202205151 ViralZone: family, genus

Scientific Name	Satellite tobacco necrosis virus C [TAX:2025096]
Lineage	Viruses; Riboviria; Albetovirus; Tobacco albetovirus 3
RefSeq	NC_043430 Satellite tobacco necrosis virus C coat protein.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 9634099
Authors	Bringloe DH, Gultyaev AP, Pelpel M, Pleij CW, Coutts RH
Title	The nucleotide sequence of satellite tobacco necrosis virus strain C and helper-assisted replication of wild-type and mutant clones of the virus.
Journal	J Gen Virol. 1998 Jun;79 ( Pt 6):1539-46.
DBLINKS	KEGG BRITE: NC_043430 ViralZone: genus

Scientific Name	Scrophularia mottle virus [TAX:312273]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Tymovirales; Tymoviridae; Tymovirus; Tymovirus scrophulariae
RefSeq	NC_011537 Scrophularia mottle virus, complete genome.
Evidence	Literature
Reference	PMID: 15883655
Authors	Koenig R, Pleij CW, Lesemann DE, Loss S, Vetten HJ
Title	Molecular characterization of isolates of anagyris vein yellowing virus, plantago mottle virus and scrophularia mottle virus -- comparison of various approaches for tymovirus classification.
Journal	Arch Virol. 2005 Nov;150(11):2325-38.
DBLINKS	KEGG BRITE: NC_011537 ViralZone: genus, family Descriptions of Plant Viruses: 113

Scientific Name	Sida Brazil virus [TAX:666145]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; unclassified Begomovirus
RefSeq	NC_038887 Sida Brazil virus segment DNA A, complete sequence.
Evidence	Literature
Reference	PMID: 20553707
Authors	Paprotka T, Metzler V, Jeske H
Title	The first DNA 1-like alpha satellites in association with New World begomoviruses in natural infections.
Journal	Virology. 2010 Sep 1;404(2):148-57.
DBLINKS	KEGG BRITE: NC_038887 ViralZone: genus, family

Scientific Name	Sida golden mosaic Buckup virus-[Jamaica:St. Elizabeth:2004] [TAX:929769]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Sida golden mosaic Buckup virus
RefSeq	NC_014794 Sida golden mosaic Buckup virus-[Jamaica:St. Elizabeth:2004] DNA-A, complete genome. NC_014795 Sida golden mosaic Buckup virus-[Jamaica:St. Elizabeth:2004] DNA-B, complete genome.
Evidence	Literature
Reference	PMID: 23933798
Authors	Stewart C, Kon T, Rojas M, Graham A, Martin D, Gilbertson R, Roye M
Title	The molecular characterisation of a Sida-infecting begomovirus from Jamaica.
Journal	Arch Virol. 2014 Feb;159(2):375-8.
DBLINKS	KEGG BRITE: NC_014794 NC_014795 ViralZone: genus, family

Scientific Name	Sida golden mosaic Costa Rica virus [TAX:223313]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_004657 Sida golden mosaic Costa Rica virus DNA A, complete sequence. NC_004658 Sida golden mosaic Costa Rica virus DNA B, complete sequence.
Evidence	Literature
Reference	PMID: 9225056
Authors	Höfer P, Engel M, Jeske H, Frischmuth T
Title	Nucleotide sequence of a new bipartite geminivirus isolated from the common weed Sida rhombifolia in Costa Rica.
Journal	J Gen Virol. 1997 Jul;78 ( Pt 7):1785-90.
Comment	Nicotiana benthamiana D.
DBLINKS	KEGG BRITE: NC_004657 NC_004658 ICTV: 202203338 ViralZone: genus, family

Scientific Name	Sida golden mosaic Honduras virus [TAX:223316]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_004659 Sida golden mosaic Honduras virus DNA A, complete sequence. NC_004660 Sida golden mosaic Honduras virus DNA B, complete sequence.
Evidence	Literature
Reference	PMID: 9349490
Authors	Frischmuth T, Engel M, Lauster S, Jeske H
Title	Nucleotide sequence evidence for the occurrence of three distinct whitefly-transmitted, Sida-infecting bipartite geminiviruses in Central America.
Journal	J Gen Virol. 1997 Oct;78 ( Pt 10):2675-82.
Comment	Nicotiana benthamiana Nicotiana benthamiana
DBLINKS	KEGG BRITE: NC_004659 NC_004660 ViralZone: genus, family

Scientific Name	Sida micrantha mosaic virus [TAX:228897]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_005330 Sida micrantha mosaic virus segment A, complete sequence. NC_005331 Sida micrantha mosaic virus segment B, complete sequence.
Evidence	Literature
Reference	PMID: 15045569
Authors	Jovel J, Reski G, Rothenstein D, Ringel M, Frischmuth T, Jeske H
Title	Sida micrantha mosaic is associated with a complex infection of begomoviruses different from Abutilon mosaic virus.
Journal	Arch Virol. 2004 Apr;149(4):829-41.
DBLINKS	KEGG BRITE: NC_005330 NC_005331 ICTV: 202203345 ViralZone: genus, family

Scientific Name	Sida yellow vein virus [TAX:223321]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_004661 Sida yellow vein virus DNA A, complete sequence. NC_004662 Sida yellow vein virus DNA B, complete sequence.
Evidence	Literature
Reference	PMID: 9349490
Authors	Frischmuth T, Engel M, Lauster S, Jeske H
Title	Nucleotide sequence evidence for the occurrence of three distinct whitefly-transmitted, Sida-infecting bipartite geminiviruses in Central America.
Journal	J Gen Virol. 1997 Oct;78 ( Pt 10):2675-82.
Comment	Nicotiana benthamiana
DBLINKS	KEGG BRITE: NC_004661 NC_004662 ICTV: 202203361 ViralZone: genus, family

Scientific Name	South African cassava mosaic virus [TAX:63723]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_003803 South African cassava mosaic virus DNA A, complete sequence. NC_003804 South African cassava mosaic virus DNA B, complete sequence.
Evidence	Literature
Reference	PMID: 11125158
Authors	Berrie LC, Rybicki EP, Rey ME
Title	Complete nucleotide sequence and host range of South African cassava mosaic virus: further evidence for recombination amongst begomoviruses.
Journal	J Gen Virol. 2001 Jan;82(Pt 1):53-8.
DBLINKS	KEGG BRITE: NC_003803 NC_003804 ICTV: 202203365 ViralZone: genus, family

Scientific Name	Sri Lankan cassava mosaic virus - [Ker20] [TAX:475454]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Sri Lankan cassava mosaic virus
GenBank	AJ579307 Sri Lankan cassava mosaic virus - [Ker20] segment A, isolate Adivaram. AJ579308 Sri Lankan cassava mosaic virus - [Ker20] segment B, isolate Adivaram.
Evidence	Literature
Reference	PMID: 15986172
Authors	Dutt N, Briddon RW, Dasgupta I
Title	Identification of a second begomovirus, Sri Lankan cassava mosaic virus, causing cassava mosaic disease in India.
Journal	Arch Virol. 2005 Oct;150(10):2101-8.
DBLINKS	ViralZone: genus, family

Scientific Name	Sri Lankan cassava mosaic virus-[Colombo] [TAX:223328]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Sri Lankan cassava mosaic virus
RefSeq	NC_003861 Sri Lankan cassava mosaic virus-[Colombo] DNA-A, complete genome, isolate SLCMV-Col. NC_003862 Sri Lankan cassava mosaic virus-[Colombo] DNA-B, complete genome, isolate SLCMV-Col.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_003861 NC_003862 ViralZone: genus, family

Scientific Name	Streptocarpus flower break virus [TAX:335187]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae; Tobamovirus
RefSeq	NC_008365 Streptocarpus flower break virus, complete genome.
Evidence	Literature
Reference	Verhoeven, J. T. J., Bouwen, I., & Roenhorst, J. W. (1995). A new flower breaking tobamovirus ofStreptocarpus. European journal of plant pathology, 101(3), 311-318.
DBLINKS	KEGG BRITE: NC_008365 ICTV: 202205443 ViralZone: genus, family

Scientific Name	Tobacco curly shoot alphasatellite [TAX:926844]
Lineage	Viruses; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite
RefSeq	NC_005057 Tobacco curly shoot virus associated DNA 1, complete genome. NC_014798 Tobacco curly shoot alphasatellite isolate WSFA1, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_005057 NC_014798 ICTV: 202205694 ViralZone: family

Scientific Name	Tobacco leaf curl Thailand virus [TAX:409287]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_009553 Tobacco leaf curl Thailand virus, complete genome.
Evidence	Literature
Reference	PMID: 17226067
Authors	Knierim D, Maiss E
Title	Application of Phi29 DNA polymerase in identification and full-length clone inoculation of tomato yellow leaf curl Thailand virus and tobacco leaf curl Thailand virus.
Journal	Arch Virol. 2007;152(5):941-54.
Comment	Infection test: "in agroinoculation experiments, TbLCTHV caused upward leaf curling and yellowing of N. benthamiana plants."
DBLINKS	KEGG BRITE: NC_009553 ICTV: 202203395 ViralZone: genus, family

Scientific Name	Tobacco leaf curl Zimbabwe virus [TAX:223337]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_002817 Tobacco leaf curl Zimbabwe virus, complete genome.
Evidence	Literature
Reference	PMID: 11714987
Authors	Paximadis M, Rey ME
Title	Genome organization of Tobacco leaf curl Zimbabwe virus, a new, distinct monopartite begomovirus associated with subgenomic defective DNA molecules.
Journal	J Gen Virol. 2001 Dec;82(Pt 12):3091-7.
Comment	Intection test: N. benthamiana exhibits severe leaf curl symptoms.
DBLINKS	KEGG BRITE: NC_002817 ICTV: 202203397 ViralZone: genus, family

Scientific Name	Tobacco yellow crinkle virus [TAX:565052]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_015627 Tobacco yellow crinkle virus DNA A, complete genome. NC_015628 Tobacco yellow crinkle virus DNA B, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_015627 NC_015628 ICTV: 202203400 ViralZone: genus, family

Scientific Name	Tomato chlorotic mottle virus [TAX:172391]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_003664 Tomato chlorotic mottle virus DNA A, complete sequence. NC_003665 Tomato chlorotic mottle virus DNA B, complete sequence.
Evidence	Literature
Reference	PMID: 17135316
Authors	Ribeiro SG, Lohuis H, Goldbach R, Prins M
Title	Tomato chlorotic mottle virus is a target of RNA silencing but the presence of specific short interfering RNAs does not guarantee resistance in transgenic plants.
Journal	J Virol. 2007 Feb;81(4):1563-73.
Comment	Infection test: Experimentally, this begomovirus infects a range of different host plants, including N. benthamiana and petunia.
DBLINKS	KEGG BRITE: NC_003664 NC_003665 ICTV: 202203405 ViralZone: genus, family

Scientific Name	Tomato golden mosaic virus [TAX:10831]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_001507 Tomato golden mosaic virus DNA A, complete sequence. NC_001508 Tomato golden mosaic virus DNA B, complete sequence.
Evidence	Literature
Reference	PMID: 8806554
Authors	Jeffrey JL, Pooma W, Petty IT
Title	Genetic requirements for local and systemic movement of tomato golden mosaic virus in infected plants.
Journal	Virology. 1996 Sep 1;223(1):208-18.
	Hamilton, W. D. O., Sanders, R. C., Coutts, R. H., & Buck, K. W. (1981). Characterisation of tomato golden mosaic virus as a geminivirus. FEMS Microbiology Letters, 11(4), 263-267.
DBLINKS	KEGG BRITE: NC_001507 NC_001508 ICTV: 202203410 ViralZone: genus, family Descriptions of Plant Viruses: 303

Scientific Name	Tomato infectious chlorosis virus [TAX:52135]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Closteroviridae; Crinivirus
RefSeq	NC_013258 Tomato infectious chlorosis virus RNA 1, complete genome. NC_013259 Tomato infectious chlorosis virus RNA 2, complete genome.
Evidence	Literature
Reference	PMID: 19575276
Authors	Wintermantel WM, Hladky LL, Gulati-Sakhuja A, Li R, Liu HY, Tzanetakis IE
Title	The complete nucleotide sequence and genome organization of tomato infectious chlorosis virus: a distinct crinivirus most closely related to lettuce infectious yellows virus.
Journal	Arch Virol. 2009;154(8):1335-41.
Comment	Laboratory host: TICV Orange County isolate has been maintained in Nicotiana benthamiana Domin, N. clevelandii Gray, and Physalis wrightii Gray plants by transmission using T. vaporariorum.
DBLINKS	KEGG BRITE: NC_013258 NC_013259 KEGG GENOME: T40143 ICTV: 202203018 ViralZone: family, genus

Scientific Name	Tomato leaf curl Gujarat virus [TAX:219299]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_004558 Tomato leaf curl Gujarat virus - [Varanasi] segment A, complete sequence. NC_004559 Tomato leaf curl Gujarat virus - [Varanasi] segment B, complete sequence.
Evidence	Literature
Reference	PMID: 18943612
Authors	Chakraborty S, Pandey PK, Banerjee MK, Kalloo G, Fauquet CM
Title	Tomato leaf curl Gujarat virus, a New Begomovirus Species Causing a Severe Leaf Curl Disease of Tomato in Varanasi, India.
Journal	Phytopathology. 2003 Dec;93(12):1485-95.
DBLINKS	KEGG BRITE: NC_004558 NC_004559 ICTV: 202203425 ViralZone: genus, family

Scientific Name	Tomato leaf curl Java virus [TAX:263001]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_005031 Tomato leaf curl Java virus, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_005031 ICTV: 202203430 ViralZone: genus, family

Scientific Name	Tomato leaf curl Java virus-[Ageratum] satellite DNA [TAX:263578]
Lineage	Viruses; Tolecusatellitidae; Betasatellite; Tomato leaf curl Java betasatellite
RefSeq	NC_005497 Tomato leaf curl Java virus-[Ageratum] satellite DNA, complete genome.
Evidence	Literature
Reference	PMID: 17294343
Authors	Kon T, Kuwabara K, Hidayat SH, Ikegami M
Title	A begomovirus associated with Ageratum yellow vein disease in Indonesia: evidence for natural recombination between tomato leaf curl Java virus and Ageratum yellow vein virus-[Java].
Journal	Arch Virol. 2007;152(6):1147-57.
DBLINKS	KEGG BRITE: NC_005497 ViralZone: family, genus

Scientific Name	Tomato leaf curl Philippines virus [TAX:96054]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_005032 Tomato leaf curl Philippines virus, complete genome.
Evidence	Literature
Reference	PMID: 21053032
Authors	Sharma P, Matsuda N, Bajet NB, Ikegami M
Title	Molecular analysis of new isolates of Tomato leaf curl Philippines virus and an associated betasatellite occurring in the Philippines.
Journal	Arch Virol. 2011 Feb;156(2):305-12.
DBLINKS	KEGG BRITE: NC_005032 ICTV: 202203449 ViralZone: genus, family

Scientific Name	Tomato marchitez virus [TAX:470166]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Torradovirus; Torradovirus marchitezum
RefSeq	NC_010987 Tomato marchitez virus RNA 1, complete sequence. NC_010988 Tomato marchitez virus, RNA2, complete sequence.
Evidence	Literature
Reference	PMID: 17965923
Authors	Verbeek M, Dullemans AM, van den Heuvel JF, Maris PC, van der Vlugt RA
Title	Tomato marchitez virus, a new plant picorna-like virus from tomato related to tomato torrado virus.
Journal	Arch Virol. 2008;153(1):127-34.
DBLINKS	KEGG BRITE: NC_010987 NC_010988 KEGG GENOME: T40133 ViralZone: family, genus

Scientific Name	Tomato mosaic Havana virus [TAX:223356]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_003868 Tomato mosaic Havana virus DNA B, complete sequence.
Evidence	Literature
Reference	PMID: 9787659
Authors	Martinez Zubiaur Y, de Blas C, Quiñones M, Castellanos C, Peralta EL, Romero J
Title	Havana tomato virus, a new bipartite geminivirus infecting tomatoes in Cuba.
Journal	Arch Virol. 1998;143(9):1757-72.
DBLINKS	KEGG BRITE: NC_003868 ICTV: 202203466 ViralZone: genus, family

Scientific Name	Tomato mottle virus [TAX:10835]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_001938 Tomato mottle virus DNA A, complete sequence. NC_001939 Tomato mottle virus DNA B, complete sequence.
Evidence	Literature
Reference	PMID: 1469361
Authors	Abouzid AM, Polston JE, Hiebert E
Title	The nucleotide sequence of tomato mottle virus, a new geminivirus isolated from tomatoes in Florida.
Journal	J Gen Virol. 1992 Dec;73 ( Pt 12):3225-9.
Comment	Laboratory host: Nicotiana tabacum Vecter: Aleyrodidae
DBLINKS	KEGG BRITE: NC_001938 NC_001939 KEGG GENOME: T40138 ICTV: 202203469 ViralZone: genus, family

Scientific Name	Tomato mottle virus-[Florida] [TAX:223359]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Tomato mottle virus
GenBank	L14460 Tomato mottle virus-[Florida] complete A component DNA; coat protein (AR1), replicative protein (AL1), transcriptional element (AL2), and AL3 genes, complete cds. L14461 Tomato mottle virus-[Florida] B component, complete sequence.
Evidence	Literature
Reference	PMID: 1469361
Authors	Abouzid AM, Polston JE, Hiebert E
Title	The nucleotide sequence of tomato mottle virus, a new geminivirus isolated from tomatoes in Florida.
Journal	J Gen Virol. 1992 Dec;73 ( Pt 12):3225-9.
Comment	Laboratory host: Nicotiana tabacum Vecter: Aleyrodidae
Evidence	Other
Comment	Laboratory host: Nicotiana tabacum Vecter: Aleyrodidae
DBLINKS	ViralZone: genus, family

Scientific Name	Tomato rugose mosaic virus [TAX:134599]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_002555 Tomato rugose mosaic virus DNA A, complete sequence. NC_002556 Tomato rugose mosaic virus DNA B, complete sequence.
Evidence	Literature
Reference	Fernandes, J. J., Carvalho, M. G., Andrade, E. C., Brommonschenkel, S. H., Fontes, E. P. B., & Zerbini, F. M. (2006). Biological and molecular properties of Tomato rugose mosaic virus (ToRMV), a new tomato‐infecting begomovirus from Brazil. Plant Pathology, 55(4), 513-522.
DBLINKS	KEGG BRITE: NC_002555 NC_002556 ICTV: 202203470 ViralZone: genus, family

Scientific Name	Tomato torrado virus [TAX:370833]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Secoviridae; Torradovirus; Torradovirus lycopersici
RefSeq	NC_009013 Tomato torrado virus RNA1, complete sequence. NC_009032 Tomato torrado virus RNA2, complete sequence.
Evidence	Other
Comment	N.benthamiana
DBLINKS	KEGG BRITE: NC_009013 NC_009032 KEGG GENOME: T40134 ViralZone: family, genus

Scientific Name	Tomato yellow leaf curl Sardinia virus [TAX:123735]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_003828 Tomato yellow leaf curl Sardinia virus, complete genome.
Evidence	Literature
Reference	PMID: 9811744
Authors	Noris E, Vaira AM, Caciagli P, Masenga V, Gronenborn B, Accotto GP
Title	Amino acids in the capsid protein of tomato yellow leaf curl virus that are crucial for systemic infection, particle formation, and insect transmission.
Journal	J Virol. 1998 Dec;72(12):10050-7.
Comment	No systemic infection.
DBLINKS	KEGG BRITE: NC_003828 ICTV: 202203481 ViralZone: genus, family

Scientific Name	Tomato yellow leaf curl virus [TAX:10832]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_004005 Tomato yellow leaf curl virus, complete genome.
Evidence	Literature
Reference	PMID: 18943307
Authors	Morilla G, Janssen D, García-Andrés S, Moriones E, Cuadrado IM, Bejarano ER
Title	Pepper (Capsicum annuum) Is a Dead-End Host for Tomato yellow leaf curl virus.
Journal	Phytopathology. 2005 Sep;95(9):1089-97.
DBLINKS	KEGG BRITE: NC_004005 KEGG GENOME: T40140 ICTV: 202203484 ViralZone: genus, family

Scientific Name	Tomato yellow leaf distortion virus [TAX:649996]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_011348 Tomato yellow leaf distortion virus DNA A, complete genome. NC_017913 Tomato yellow leaf distortion virus clone EF5N segment DNA-B, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_011348 NC_017913 ICTV: 202203485 ViralZone: genus, family

Scientific Name	Tomato yellow ring virus [TAX:304859]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus; Orthotospovirus tomatanuli
RefSeq	NC_055411 Tomato yellow ring virus isolate TYRV-t segment M, complete sequence. NC_055412 Tomato yellow ring virus strain TYRV-t non-structural protein (NS) and nucleocapsid protein (N) genes, complete cds. NC_055413 Tomato yellow ring virus isolate TYRV-t segment L, complete sequence.
Evidence	Literature
Reference	PMID: 23334441
Authors	Chen TC, Li JT, Fan YS, Yeh YC, Yeh SD, Kormelink R
Title	Molecular characterization of the full-length L and M RNAs of Tomato yellow ring virus, a member of the genus Tospovirus.
Journal	Virus Genes. 2013 Jun;46(3):487-95.
Comment	Lobratory host: Nicotiana benthamiana, Chenopodium quinoa
DBLINKS	KEGG BRITE: NC_055411 NC_055412 NC_055413 ViralZone: family, genus

Scientific Name	Ugandan cassava brown streak virus [TAX:946046]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Ipomovirus
RefSeq	NC_014791 Ugandan cassava brown streak virus, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_014791 ICTV: 202204548 ViralZone: family, genus

Scientific Name	Velvet bean severe mosaic virus [TAX:667119]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus
RefSeq	NC_013414 Velvet bean severe mosaic virus DNA A, complete genome. NC_013415 Velvet bean severe mosaic virus DNA B, complete genome.
Evidence	Literature
Reference	PMID: 21556742
Authors	Zaim M, Kumar Y, Hallan V, Zaidi AA
Title	Velvet bean severe mosaic virus: a distinct begomovirus species causing severe mosaic in Mucuna pruriens (L.) DC.
Journal	Virus Genes. 2011 Aug;43(1):138-46.
Comment	Vecter:B. tabaci
Evidence	Other
Comment	Vecter:B. tabaci
DBLINKS	KEGG BRITE: NC_013414 NC_013415 ICTV: 202203490 ViralZone: genus, family

Scientific Name	Watermelon bud necrosis virus [TAX:76052]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus; Orthotospovirus citrullonecrosis
RefSeq	NC_038288 Watermelon bud necrosis virus strain JT segment S, complete sequence. NC_038289 Watermelon bud necrosis virus strain JT L protein gene, complete cds. NC_038290 Watermelon bud necrosis virus strain JT segment M, complete sequence.
Evidence	Literature
Reference	PMID: 21184244
Authors	Li JT, Yeh YC, Yeh SD, Raja JA, Rajagopalan PA, Liu LY, Chen TC
Title	Complete genomic sequence of watermelon bud necrosis virus.
Journal	Arch Virol. 2011 Feb;156(2):359-62.
DBLINKS	KEGG BRITE: NC_038288 NC_038289 NC_038290 ViralZone: family, genus

Scientific Name	Yam mosaic virus [TAX:41460]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Patatavirales; Potyviridae; Potyvirus
RefSeq	NC_004752 Yam mosaic virus, complete genome.
Evidence	Literature
Reference	PMID: 8774686
Authors	Aleman ME, Marcos JF, Brugidou C, Beachy RN, Fauquet C
Title	The complete nucleotide sequence of yam mosaic virus (Ivory Coast isolate) genomic RNA.
Journal	Arch Virol. 1996;141(7):1259-78.
Comment	Nicotiana benthamiana
DBLINKS	KEGG BRITE: NC_004752 ICTV: 202204715 ViralZone: family, genus Descriptions of Plant Viruses: 314

Scientific Name	Zucchini green mottle mosaic virus [TAX:111418]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae; Tobamovirus
RefSeq	NC_003878 Zucchini green mottle mosaic virus, complete genome.
Evidence	Literature
Reference	PMID: 18943088
Authors	Yoon JY, Min BE, Choi JK, Ryu KH
Title	Genome Structure and Production of Biologically Active In Vitro Transcripts of Cucurbit-Infecting Zucchini green mottle mosaic virus.
Journal	Phytopathology. 2002 Feb;92(2):156-63.
DBLINKS	KEGG BRITE: NC_003878 ICTV: 202205457 ViralZone: genus, family