Species

KNApSAcK Entry

Organism name Podocarpus nagi
Genus Podocarpus
Family Podocarpaceae
Kingdom Plantae

NCBI taxonomy

Entry

Linked NCBI taxonomy name Nageia nagi
Linked NCBI taxonomy ID 36012
Linked level species

Family

Family in NCBI taxonomy Podocarpaceae
ID 3362

Kingdom (Superkingdom)

Kingdom (Superkingdom) in NCBI taxonomy Viridiplantae
ID 33090

Plant class

Plant class Spermatophyta
ID 58024

Metabolite list (8)

KNApSAcK ID name ChEMBL link CTD link # of proteins in
ChEMBL interaction
/ related OMIM
/ related KEGG DISEASE
# of genes in
CTD interaction
/ related diseases
KCF-S
cluster
phytochemical
cluster
figure
C00006494 External link 512 Isoginkgetin
CHEMBL1208903
10 / 32 / 61 No. 34 No. 18
C00000956 External link 512 (-)-Epicatechin
CHEMBL80941
CHEMBL311498
CHEMBL129482
CHEMBL200715
CHEMBL206452
CHEMBL583912
85 / 58 / 54 No. 52 No. 14
C00000272 External link 512 Nagilactone E
CHEMBL519090
No. 463 No. 41
C00000273 External link 512 Nagilactone F
CHEMBL1765574
1 / 0 / 0 No. 1155 No. 41
C00000271 External link 512 Nagilactone D
No. 1854 No. 41
C00000270 External link 512 Nagilactone C
CHEMBL176006
CHEMBL487996
C004552
No. 1854 No. 41
C00000269 External link 512 Nagilactone B
CHEMBL1586581
19 / 26 / 18 No. 1854 No. 41
C00000268 External link 512 Nagilactone A
CHEMBL1381439
13 / 20 / 13 No. 1854 No. 41

Human Protein / Gene in interactions

104 ChEMBL Protein in interactions

accession description class description KNApSAcK metabolite in interactions # of diseases
(OMIM / KEGG)
Q16637 Survival motor neuron protein Unclassified protein C00000268 C00000269 C00000956 4 / 1
P84022 Mothers against decapentaplegic homolog 3 Unclassified protein C00000268 C00000269 C00000956 2 / 0
P02545 Prelamin-A/C Unclassified protein C00000268 C00000269 C00006494 11 / 10
P08684 Cytochrome P450 3A4 Cytochrome P450 3A4 C00000956 C00006494 0 / 1
Q16236 Nuclear factor erythroid 2-related factor 2 Unclassified protein C00000268 C00000269 0 / 0
Q9UIF8 Bromodomain adjacent to zinc finger domain protein 2B Unclassified protein C00000269 C00000956 0 / 0
Q99700 Ataxin-2 Unclassified protein C00000268 C00000269 1 / 1
P10636 Microtubule-associated protein tau Unclassified protein C00000956 C00006494 4 / 3
Q9UNA4 DNA polymerase iota Enzyme C00000268 C00000956 0 / 0
P06746 DNA polymerase beta Enzyme C00000268 C00000956 0 / 0
O75874 Isocitrate dehydrogenase [NADP] cytoplasmic Enzyme C00000268 C00000269 1 / 0
P19838 Nuclear factor NF-kappa-B p105 subunit Transcription Factor C00000269 C00000956 0 / 0
Q96QE3 ATPase family AAA domain-containing protein 5 Unclassified protein C00000268 C00000269 0 / 0
Q99714 3-hydroxyacyl-CoA dehydrogenase type-2 Enzyme C00000956 C00006494 3 / 3
P56817 Beta-secretase 1 A1A C00000956 C00006494 0 / 0
O94782 Ubiquitin carboxyl-terminal hydrolase 1 Enzyme C00000956 C00006494 0 / 0
P43220 Glucagon-like peptide 1 receptor Glucagon-like peptide receptor C00000268 C00000269 0 / 0
O00255 Menin Unclassified protein C00000956 C00006494 2 / 5
O75496 Geminin Unclassified protein C00000268 C00000269 0 / 0
Q03164 Histone-lysine N-methyltransferase 2A Enzyme C00000956 C00006494 1 / 2
P42858 Huntingtin Unclassified protein C00000268 C00000269 1 / 1
P07451 Carbonic anhydrase 3 Lyase C00000956 0 / 0
P49327 Fatty acid synthase Transferase C00000956 0 / 0
P11712 Cytochrome P450 2C9 Cytochrome P450 2C9 C00000956 0 / 1
P54132 Bloom syndrome protein Enzyme C00000956 1 / 2
Q9NR56 Muscleblind-like protein 1 Unclassified protein C00000269 1 / 0
P11388 DNA topoisomerase 2-alpha Isomerase C00000956 0 / 0
P11473 Vitamin D3 receptor NR1I1 C00000956 2 / 3
P23219 Prostaglandin G/H synthase 1 Oxidoreductase C00000956 0 / 0
P41145 Kappa-type opioid receptor Opioid receptor C00000956 0 / 0
P23280 Carbonic anhydrase 6 Lyase C00000956 0 / 0
Q9Y3R4 Sialidase-2 Enzyme C00000956 0 / 0
Q9ULX7 Carbonic anhydrase 14 Lyase C00000956 0 / 0
P00352 Retinal dehydrogenase 1 Enzyme C00000956 0 / 0
P68871 Hemoglobin subunit beta Secreted protein C00006494 4 / 4
O43570 Carbonic anhydrase 12 Lyase C00000956 1 / 2
P39748 Flap endonuclease 1 Enzyme C00000956 0 / 0
P07998 Ribonuclease pancreatic Enzyme C00000956 0 / 0
P00918 Carbonic anhydrase 2 Lyase C00000956 1 / 2
P47989 Xanthine dehydrogenase/oxidase Oxidoreductase C00000956 1 / 1
P16473 Thyrotropin receptor Glycohormone receptor C00000956 3 / 2
P51151 Ras-related protein Rab-9A Unclassified protein C00000269 0 / 0
P41143 Delta-type opioid receptor Opioid receptor C00000956 0 / 0
P00915 Carbonic anhydrase 1 Lyase C00000956 0 / 0
P07711 Cathepsin L1 C1A C00000956 0 / 0
P28907 ADP-ribosyl cyclase 1 Enzyme C00000956 0 / 1
Q9Y253 DNA polymerase eta Enzyme C00000956 1 / 1
P09923 Intestinal-type alkaline phosphatase Enzyme C00000956 0 / 0
P05186 Alkaline phosphatase, tissue-nonspecific isozyme Enzyme C00000956 3 / 1
P83916 Chromobox protein homolog 1 Unclassified protein C00000268 0 / 0
Q8N1Q1 Carbonic anhydrase 13 Lyase C00000956 0 / 0
P00734 Prothrombin S1A C00000956 4 / 2
P04745 Alpha-amylase 1 Enzyme C00000956 0 / 0
P08581 Hepatocyte growth factor receptor TK tyrosine-protein kinase MET subfamily C00000956 2 / 3
P28482 Mitogen-activated protein kinase 1 Erk C00000956 0 / 0
P10696 Alkaline phosphatase, placental-like Enzyme C00000956 0 / 1
P52209 6-phosphogluconate dehydrogenase, decarboxylating Enzyme C00000956 0 / 0
P05177 Cytochrome P450 1A2 Cytochrome P450 1A2 C00000956 0 / 0
Q16790 Carbonic anhydrase 9 Lyase C00000956 0 / 1
P43166 Carbonic anhydrase 7 Lyase C00000956 0 / 0
P15428 15-hydroxyprostaglandin dehydrogenase [NAD(+)] Enzyme C00000956 2 / 2
O15118 Niemann-Pick C1 protein Unclassified protein C00000269 1 / 1
Q01453 Peripheral myelin protein 22 Unclassified protein C00000956 5 / 2
O75030 Microphthalmia-associated transcription factor Unclassified protein C00000269 4 / 4
P35218 Carbonic anhydrase 5A, mitochondrial Lyase C00000956 0 / 0
P00374 Dihydrofolate reductase Oxidoreductase C00000956 1 / 1
P35372 Mu-type opioid receptor Opioid receptor C00000956 0 / 0
Q9Y2D0 Carbonic anhydrase 5B, mitochondrial Lyase C00000956 0 / 0
P16050 Arachidonate 15-lipoxygenase Enzyme C00000956 0 / 0
P33261 Cytochrome P450 2C19 Cytochrome P450 2C19 C00000956 1 / 1
P10253 Lysosomal alpha-glucosidase Hydrolase C00000956 1 / 1
Q13093 Platelet-activating factor acetylhydrolase Enzyme C00000956 3 / 0
Q6W5P4 Neuropeptide S receptor Neuropeptide receptor C00000956 1 / 0
P27695 DNA-(apurinic or apyrimidinic site) lyase Enzyme C00000956 0 / 0
P22309 UDP-glucuronosyltransferase 1-1 Enzyme C00000956 5 / 1
P35354 Prostaglandin G/H synthase 2 Oxidoreductase C00000956 0 / 3
P10635 Cytochrome P450 2D6 Cytochrome P450 2D6 C00000956 1 / 0
P05412 Transcription factor AP-1 Transcription Factor C00000273 0 / 0
P02768 Serum albumin Secreted protein C00000956 0 / 0
P22748 Carbonic anhydrase 4 Lyase C00000956 1 / 1
P10415 Apoptosis regulator Bcl-2 Other cytosolic protein C00000956 0 / 7
Q9UBT6 DNA polymerase kappa Enzyme C00000956 0 / 0
B2RXH2 Lysine-specific demethylase 4E Enzyme C00000956 0 / 0
P46063 ATP-dependent DNA helicase Q1 Enzyme C00000956 0 / 0
Q96KQ7 Histone-lysine N-methyltransferase EHMT2 Enzyme C00000956 0 / 0
Q9NUW8 Tyrosyl-DNA phosphodiesterase 1 Enzyme C00000956 1 / 1
P04637 Cellular tumor antigen p53 Transcription Factor C00006494 7 / 37
Q8IUX4 DNA dC->dU-editing enzyme APOBEC-3F Enzyme C00000269 0 / 0
P18031 Tyrosine-protein phosphatase non-receptor type 1 Tyr C00000956 0 / 0
P22310 UDP-glucuronosyltransferase 1-4 Enzyme C00000956 3 / 0
Q05513 Protein kinase C zeta type Iota C00000956 0 / 0
Q04759 Protein kinase C theta type Delta C00000956 0 / 1
Q02156 Protein kinase C epsilon type Eta C00000956 0 / 0
O94806 Serine/threonine-protein kinase D3 Pkd C00000956 0 / 0
P17252 Protein kinase C alpha type Alpha C00000956 0 / 0
Q05655 Protein kinase C delta type Delta C00000956 0 / 0
P05129 Protein kinase C gamma type Alpha C00000956 1 / 1
P05771 Protein kinase C beta type Alpha C00000956 0 / 0
P24723 Protein kinase C eta type Eta C00000956 1 / 0
P41743 Protein kinase C iota type Iota C00000956 0 / 0
Q15139 Serine/threonine-protein kinase D1 Pkd C00000956 0 / 0
Q00653 Nuclear factor NF-kappa-B p100 subunit Transcription Factor C00000269 0 / 0
Q04206 Transcription factor p65 Transcription Factor C00000269 0 / 0
Q9H0H5 Rac GTPase-activating protein 1 Unclassified protein C00000956 0 / 0

Related Diseases

Diseases related to proteins in ChEMBL interactions

OMIM (89)

OMIM preferred title UniProt
#300438 17-beta-hydroxysteroid dehydrogenase x deficiency Q99714
#202300 Adrenocortical carcinoma, hereditary; adcc P04637
#103470 Albinism, ocular, with sensorineural deafness O75030
#600807 Asthma, susceptibility to Q13093
#608584 Asthma-related traits, susceptibility to, 2 Q6W5P4
#614740 Basal cell carcinoma, susceptibility to, 7; bcc7 P04637
#613985 Beta-thalassemia P68871
#603902 Beta-thalassemia, dominant inclusion body type P68871
#601816 Bilirubin, serum level of, quantitative trait locus 1; biliqtl1 P22309
#210900 Bloom syndrome; blm P54132
#115200 Cardiomyopathy, dilated, 1a; cmd1a P02545
#212112 Cardiomyopathy, dilated, with hypergonadotropic hypogonadism P02545
#118300 Charcot-marie-tooth disease and deafness Q01453
#605588 Charcot-marie-tooth disease, axonal, type 2b1; cmt2b1 P02545
#118220 Charcot-marie-tooth disease, demyelinating, type 1a; cmt1a Q01453
#114500 Colorectal cancer; crc P84022
#218800 Crigler-najjar syndrome, type i P22309
P22310
#606785 Crigler-najjar syndrome, type ii P22309
P22310
#119900 Digital clubbing, isolated congenital P15428
#609535 Drug metabolism, poor, cyp2c19-related P33261
#608902 Drug metabolism, poor, cyp2d6-related P10635
#181350 Emery-dreifuss muscular dystrophy 2, autosomal dominant; edmd2 P02545
#133239 Esophageal cancer P04637
#600274 Frontotemporal dementia; ftd P10636
#143500 Gilbert syndrome P22309
P22310
#137800 Glioma susceptibility 1; glm1 O75874
#232300 Glycogen storage disease ii P10253
#139393 Guillain-barre syndrome, familial; gbs Q01453
#605130 Hairy elbows, short stature, facial dysmorphism, and developmental delay Q03164
#610140 Heart-hand syndrome, slovenian type P02545
#140700 Heinz body anemias P68871
#114550 Hepatocellular carcinoma P08581
#143100 Huntington disease; hd P42858
#176670 Hutchinson-gilford progeria syndrome; hgps P02545
#237900 Hyperbilirubinemia, transient familial neonatal; hblrtfn P22309
#143860 Hyperchlorhidrosis, isolated O43570
#145000 Hyperparathyroidism 1; hrpt1 O00255
#603373 Hyperthyroidism, familial gestational P16473
#609152 Hyperthyroidism, nonautoimmune P16473
#145900 Hypertrophic neuropathy of dejerine-sottas Q01453
#259100 Hypertrophic osteoarthropathy, primary, autosomal recessive, 1; phoar1 P15428
#146300 Hypophosphatasia, adult P05186
#241510 Hypophosphatasia, childhood P05186
#241500 Hypophosphatasia, infantile P05186
#275200 Hypothyroidism, congenital, nongoitrous, 1; chng1 P16473
#147050 Ige responsiveness, atopic; iger Q13093
#151623 Li-fraumeni syndrome 1; lfs1 P04637
#151660 Lipodystrophy, familial partial, type 2; fpld2 P02545
#613795 Loeys-dietz syndrome, type 3; lds3 P84022
#211980 Lung cancer P04637
#248370 Mandibuloacral dysplasia with type a lipodystrophy; mada P02545
#613839 Megaloblastic anemia due to dihydrofolate reductase deficiency P00374
#614456 Melanoma, cutaneous malignant, susceptibility to, 8; cmm8 O75030
#300705 Mental retardation, x-linked 17; mrx17 Q99714
#300220 Mental retardation, x-linked, syndromic 10; mrxs10 Q99714
#131100 Multiple endocrine neoplasia, type i; men1 O00255
#613205 Muscular dystrophy, congenital, lmna-related P02545
#159001 Muscular dystrophy, limb-girdle, type 1b; lgmd1b P02545
#607948 Mycobacterium tuberculosis, susceptibility to P11473
#160900 Myotonic dystrophy 1; dm1 Q9NR56
#162500 Neuropathy, hereditary, with liability to pressure palsies; hnpp Q01453
#257220 Niemann-pick disease, type c1; npc1 O15118
#259730 Osteopetrosis, autosomal recessive 3; optb3 P00918
#260500 Papilloma of choroid plexus; cpp P04637
#260540 Parkinson-dementia syndrome P10636
#172700 Pick disease of brain P10636
#614278 Platelet-activating factor acetylhydrolase deficiency; pafad Q13093
#614390 Pregnancy loss, recurrent, susceptibility to, 2; rprgl2 P00734
#613679 Prothrombin deficiency, congenital P00734
#605074 Renal cell carcinoma, papillary, 1; rccp1 P08581
#275210 Restrictive dermopathy, lethal P02545
#600852 Retinitis pigmentosa 17; rp17 P22748
#603903 Sickle cell anemia P68871
#253300 Spinal muscular atrophy, type i; sma1 Q16637
#253550 Spinal muscular atrophy, type ii; sma2 Q16637
#253400 Spinal muscular atrophy, type iii; sma3 Q16637
#271150 Spinal muscular atrophy, type iv; sma4 Q16637
#605361 Spinocerebellar ataxia 14; sca14 P05129
#183090 Spinocerebellar ataxia 2; sca2 Q99700
#607250 Spinocerebellar ataxia, autosomal recessive, with axonal neuropathy; scan1 Q9NUW8
#275355 Squamous cell carcinoma, head and neck; hnscc P04637
#601367 Stroke, ischemic P00734
P24723
#601104 Supranuclear palsy, progressive, 1; psnp1 P10636
#188050 Thrombophilia due to thrombin defect; thph1 P00734
#103500 Tietz syndrome O75030
#277440 Vitamin d-dependent rickets, type 2a; vddr2a P11473
#193510 Waardenburg syndrome, type 2a; ws2a O75030
#278300 Xanthinuria, type i P47989
#278750 Xeroderma pigmentosum, variant type; xpv Q9Y253

KEGG DISEASE (96)

KEGG name UniProt
H00033 Adrenal carcinoma O00255 (related)
P04637 (related)
H00034 Carcinoid O00255 (related)
H00045 Malignant islet cell carcinoma O00255 (related)
H00246 Primary hyperparathyroidism O00255 (related)
H01102 Pituitary adenomas O00255 (related)
H00136 Niemann-Pick disease type C (NPC) O15118 (related)
H01302 Hyperchlorhidrosis isolated (HCHLH) O43570 (related)
H00021 Renal cell carcinoma O43570 (marker)
P04637 (marker)
P08581 (related)
Q16790 (marker)
H00038 Malignant melanoma O75030 (related)
O75030 (marker)
P04637 (related)
H00169 Ocular albinism O75030 (related)
H00759 Waardenburg syndrome (WS) O75030 (related)
H01187 Tietz syndrome O75030 (related)
H01197 Dihydrofolate reductase (DHFR) deficiency P00374 (related)
H00223 Inherited thrombophilia P00734 (related)
H01254 Congenital prothrombin deficiency P00734 (related)
H00241 Combined proximal and distal renal tubular acidosis (RTA type 3) P00918 (related)
H00436 Osteopetrosis P00918 (related)
H00264 Charcot-Marie-Tooth disease (CMT) P02545 (related)
Q01453 (related)
H00294 Dilated cardiomyopathy (DCM) P02545 (related)
H00420 Familial partial lipodystrophy (FPL) P02545 (related)
H00563 Emery-Dreifuss muscular dystrophy P02545 (related)
H00590 Congenital muscular dystrophies (CMD/MDC) P02545 (related)
H00593 Limb-girdle muscular dystrophy (LGMD) P02545 (related)
H00601 Hutchinson-Gilford progeria syndrome P02545 (related)
H00663 Restrictive dermopathy P02545 (related)
H00665 Mandibuloacral dysplasia P02545 (related)
H01216 Left ventricular noncompaction (LVNC) P02545 (related)
H00004 Chronic myeloid leukemia (CML) P04637 (related)
H00005 Chronic lymphocytic leukemia (CLL) P04637 (related)
P10415 (related)
P28907 (marker)
H00006 Hairy-cell leukemia P04637 (related)
H00008 Burkitt lymphoma P04637 (related)
H00009 Adult T-cell leukemia P04637 (related)
H00010 Multiple myeloma P04637 (related)
H00013 Small cell lung cancer P04637 (related)
P10415 (related)
H00014 Non-small cell lung cancer P04637 (related)
H00015 Malignant pleural mesothelioma P04637 (related)
H00016 Oral cancer P04637 (related)
P04637 (marker)
H00017 Esophageal cancer P04637 (related)
P04637 (marker)
P35354 (related)
H00018 Gastric cancer P04637 (related)
P08581 (related)
P10415 (related)
H00019 Pancreatic cancer P04637 (related)
P04637 (marker)
H00020 Colorectal cancer P04637 (related)
P04637 (marker)
P68871 (marker)
H00022 Bladder cancer P04637 (related)
P68871 (marker)
H00025 Penile cancer P04637 (related)
P04637 (marker)
P35354 (related)
H00026 Endometrial Cancer P04637 (related)
H00027 Ovarian cancer P04637 (related)
H00028 Choriocarcinoma P04637 (related)
P10415 (related)
H00029 Vulvar cancer P04637 (related)
H00031 Breast cancer P04637 (related)
H00032 Thyroid cancer P04637 (related)
H00036 Osteosarcoma P04637 (related)
P08684 (marker)
H00039 Basal cell carcinoma P04637 (related)
H00040 Squamous cell carcinoma P04637 (related)
H00041 Kaposi's sarcoma P04637 (related)
P10415 (related)
H00042 Glioma P04637 (related)
P04637 (marker)
H00044 Cancer of the anal canal P04637 (related)
H00046 Cholangiocarcinoma P04637 (related)
P08581 (related)
P35354 (related)
H00047 Gallbladder cancer P04637 (related)
H00048 Hepatocellular carcinoma P04637 (related)
H00055 Laryngeal cancer P04637 (related)
P04637 (marker)
H00881 Li-Fraumeni syndrome P04637 (related)
H01007 Choroid plexus papilloma P04637 (related)
H00063 Spinocerebellar ataxia (SCA) P05129 (related)
Q99700 (related)
Q9NUW8 (related)
H00213 Hypophosphatasia P05186 (related)
H00069 Glycogen storage diseases (GSD) P10253 (related)
H00030 Cervical cancer P10415 (related)
H00054 Nasopharyngeal cancer P10415 (related)
H00058 Amyotrophic lateral sclerosis (ALS) P10636 (related)
H00077 Progressive supranuclear palsy (PSP) P10636 (related)
H00078 Frontotemporal lobar degeneration (FTLD) P10636 (related)
H00023 Testicular cancer P10696 (marker)
H00342 Tuberculosis P11473 (related)
H00784 Localized autosomal recessive hypotrichosis P11473 (related)
H01143 Vitamin D-dependent rickets P11473 (related)
H01205 Coumarin resistance P11712 (related)
H00457 Primary hypertrophic osteoarthropathy (PHO) P15428 (related)
H01246 Isolated congenital nail clubbing (ICNC) P15428 (related)
H00250 Congenital nongoitrous hypothyroidism (CHNG) P16473 (related)
H01269 Congenital hyperthyroidism P16473 (related)
H00208 Hyperbilirubinemia P22309 (related)
H00527 Retinitis pigmentosa (RP) P22748 (related)
H01171 Poor drug metabolism (PM) P33261 (related)
H00059 Huntington's disease (HD) P42858 (related)
H00192 Xanthinuria P47989 (related)
H00094 DNA repair defects P54132 (related)
H00296 Defects in RecQ helicases P54132 (related)
H00228 Thalassemia P68871 (related)
H00229 Sickle cell anemia (SCA) P68871 (related)
H01296 Hereditary neuropathy with liability to pressure palsies (HNPP) Q01453 (related)
H00001 Acute lymphoblastic leukemia (ALL) (precursor B lymphoblastic leukemia) Q03164 (related)
Q03164 (marker)
H00002 Acute lymphoblastic leukemia (ALL) (precursor T lymphoblastic leukemia) Q03164 (related)
H00408 Type I diabetes mellitus Q04759 (related)
H00455 Spinal muscular atrophy (SMA) Q16637 (related)
H00480 Non-syndromic X-linked mental retardation Q99714 (related)
H00658 Syndromic X-linked mental retardation Q99714 (related)
H00925 2-Methyl-3-hydroxybutyryl-CoA dehydrogenase (MHBD) deficiency Q99714 (related)
H00403 Disorders of nucleotide excision repair Q9Y253 (related)