Species

KNApSAcK Entry

Organism name Verbena littoralis
Genus Verbena
Family Verbenaceae
Kingdom Plantae

NCBI taxonomy

Entry

Linked NCBI taxonomy name Verbena
Linked NCBI taxonomy ID 22002
Linked level genus

Family

Family in NCBI taxonomy Verbenaceae
ID 21910

Kingdom (Superkingdom)

Kingdom (Superkingdom) in NCBI taxonomy Viridiplantae
ID 33090

Plant class

Plant class asterids
ID 71274

Metabolite list (9)

KNApSAcK ID name ChEMBL link CTD link # of proteins in
ChEMBL interaction
/ related OMIM
/ related KEGG DISEASE
# of genes in
CTD interaction
/ related diseases
KCF-S
cluster
phytochemical
cluster
figure
C00013321 External link 512 8,3'-Dihydroxy-5,7,4'-trimethoxyflavone
/ 8-Hydroxy-2-(3-hydroxy-4-methoxyphenyl)-5,7-dimethoxy-4H-1-benzopyran-4-one
No. 3 No. 15
C00003850 External link 512 8-Methoxyapigenin
/ 4'-Hydroxywogonin
/ Isoscutellarein 8-methyl ether
/ 5,7,4'-Trihydroxy-8-methoxyflavone
CHEMBL245712
C093385
No. 3 No. 15
C00019064 External link 512 Oleanolic acid
/ Astrantiagenin C
/ Virgaureagenin B
/ 3beta-Hydroxyolean-12-en-28-oic acid
CHEMBL56615
CHEMBL168
CHEMBL180553
CHEMBL365375
CHEMBL486382
CHEMBL1413646
CHEMBL1436454
D009828
30 / 8 / 12 21 / 15 No. 13 No. 51
C00030516 External link 512 Isoacteoside
/ Isoverbascoside
CHEMBL504873
C064683
6 / 5 / 4 No. 33
C00002783 External link 512 Kusaginin
/ Acteoside
/ Verbascoside
CHEMBL231853
CHEMBL444478
CHEMBL1364101
C058956
12 / 1 / 1 34 / 3 No. 33
C00045086 External link 512 Stigmast-5-ene 3beta,4beta,7alpha,22alpha-tetraol
CHEMBL468236
No. 53 No. 11
C00029633 External link 512 Ursolic acid
/ Acetylursolic acid
CHEMBL55086
CHEMBL410525
4 / 2 / 2 No. 177
C00014636 External link 512 Littorachalcone
No. 375
C00014637 External link 512 Verbenachalcone
CHEMBL519611
No. 375

Human Protein / Gene in interactions

46 ChEMBL Protein in interactions

accession description class description KNApSAcK metabolite in interactions # of diseases
(OMIM / KEGG)
P83916 Chromobox protein homolog 1 Unclassified protein C00002783 C00019064 0 / 0
P27695 DNA-(apurinic or apyrimidinic site) lyase Enzyme C00019064 C00029633 0 / 0
Q9UNA4 DNA polymerase iota Enzyme C00002783 C00019064 0 / 0
P11511 Cytochrome P450 19A1 Cytochrome P450 19A1 C00019064 C00029633 2 / 2
O75496 Geminin Unclassified protein C00002783 C00019064 0 / 0
P06746 DNA polymerase beta Enzyme C00019064 C00029633 0 / 0
P18031 Tyrosine-protein phosphatase non-receptor type 1 Tyr C00019064 0 / 0
P17252 Protein kinase C alpha type Alpha C00002783 0 / 0
P39900 Macrophage metalloelastase M10A C00030516 0 / 0
P14780 Matrix metalloproteinase-9 M10A C00030516 2 / 2
P24666 Low molecular weight phosphotyrosine protein phosphatase Tyr C00019064 0 / 0
Q8TDU6 G-protein coupled bile acid receptor 1 Steroid-like ligand receptor C00019064 0 / 0
O75604 Ubiquitin carboxyl-terminal hydrolase 2 Enzyme C00019064 0 / 0
P51452 Dual specificity protein phosphatase 3 Ser_Thr_Tyr C00019064 0 / 0
P10586 Receptor-type tyrosine-protein phosphatase F Receptor tyrosine-protein phosphatase C00019064 0 / 0
P23219 Prostaglandin G/H synthase 1 Oxidoreductase C00019064 0 / 0
P39748 Flap endonuclease 1 Enzyme C00002783 0 / 0
Q92830 Histone acetyltransferase KAT2A Enzyme C00019064 0 / 0
P35354 Prostaglandin G/H synthase 2 Oxidoreductase C00019064 0 / 3
P15121 Aldose reductase Enzyme C00019064 0 / 0
P49841 Glycogen synthase kinase-3 beta Gsk C00019064 0 / 0
P03956 Interstitial collagenase M10A C00030516 0 / 1
Q9Y468 Lethal(3)malignant brain tumor-like protein 1 Unclassified protein C00002783 0 / 0
Q06124 Tyrosine-protein phosphatase non-receptor type 11 Tyr C00019064 4 / 2
O60218 Aldo-keto reductase family 1 member B10 Enzyme C00019064 0 / 0
P45452 Collagenase 3 M10A C00030516 1 / 1
Q96RI1 Bile acid receptor NR1H4 C00019064 0 / 0
P18433 Receptor-type tyrosine-protein phosphatase alpha Receptor tyrosine-protein phosphatase C00019064 0 / 0
P35236 Tyrosine-protein phosphatase non-receptor type 7 Tyr C00019064 0 / 0
P08253 72 kDa type IV collagenase M10A C00030516 1 / 3
Q96QE3 ATPase family AAA domain-containing protein 5 Unclassified protein C00019064 0 / 0
P35228 Nitric oxide synthase, inducible Enzyme C00019064 1 / 1
Q99700 Ataxin-2 Unclassified protein C00002783 1 / 1
O75164 Lysine-specific demethylase 4A Enzyme C00002783 0 / 0
Q9UIF8 Bromodomain adjacent to zinc finger domain protein 2B Unclassified protein C00002783 0 / 0
P17706 Tyrosine-protein phosphatase non-receptor type 2 Tyr C00019064 0 / 1
P08254 Stromelysin-1 M10A C00030516 1 / 0
P29350 Tyrosine-protein phosphatase non-receptor type 6 Tyr C00019064 0 / 0
P04054 Phospholipase A2 Enzyme C00019064 0 / 0
P23469 Receptor-type tyrosine-protein phosphatase epsilon Receptor tyrosine-protein phosphatase C00019064 0 / 0
Q9UBT6 DNA polymerase kappa Enzyme C00002783 0 / 0
P46063 ATP-dependent DNA helicase Q1 Enzyme C00029633 0 / 0
Q96KQ7 Histone-lysine N-methyltransferase EHMT2 Enzyme C00002783 0 / 0
Q13951 Core-binding factor subunit beta Unclassified protein C00019064 0 / 1
Q01196 Runt-related transcription factor 1 Unclassified protein C00019064 1 / 4
O94925 Glutaminase kidney isoform, mitochondrial Enzyme C00002783 0 / 0

49 Gene in CTD interactions

gene gene name gene description KNApSAcK metabolite in interactions
595 CCND1, BCL1, D11S287E, PRAD1, U21B31 cyclin D1 C00002783 C00019064
7412 VCAM1, CD106, INCAM-100 vascular cell adhesion molecule 1 C00002783 C00019064
7124 TNF, DIF, TNF-alpha, TNFA, TNFSF2 tumor necrosis factor C00002783 C00019064
5595 MAPK3, ERK-1, ERK1, ERT2, HS44KDAP, HUMKER1A, P44ERK1, P44MAPK, PRKM3, p44-ERK1, p44-MAPK mitogen-activated protein kinase 3 (EC:2.7.11.24) C00002783 C00019064
5594 MAPK1, ERK, ERK2, ERT1, MAPK2, P42MAPK, PRKM1, PRKM2, p38, p40, p41, p41mapk mitogen-activated protein kinase 1 (EC:2.7.11.24) C00002783 C00019064
3383 ICAM1, BB2, CD54, P3.58 intercellular adhesion molecule 1 C00002783 C00019064
5743 PTGS2, COX-2, COX2, GRIPGHS, PGG/HS, PGHS-2, PHS-2, hCox-2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) (EC:1.14.99.1) C00002783
1017 CDK2, p33(CDK2) cyclin-dependent kinase 2 (EC:2.7.11.22) C00002783
1019 CDK4, CMM3, PSK-J3 cyclin-dependent kinase 4 (EC:2.7.11.22) C00002783
1021 CDK6, PLSTIRE cyclin-dependent kinase 6 (EC:2.7.11.22) C00002783
1026 CDKN1A, CAP20, CDKN1, CIP1, MDA-6, P21, SDI1, WAF1, p21CIP1 cyclin-dependent kinase inhibitor 1A (p21, Cip1) C00002783
1027 CDKN1B, CDKN4, KIP1, MEN1B, MEN4, P27KIP1 cyclin-dependent kinase inhibitor 1B (p27, Kip1) C00002783
3627 CXCL10, C7, IFI10, INP10, IP-10, SCYB10, crg-2, gIP-10, mob-1 chemokine (C-X-C motif) ligand 10 C00002783
1543 CYP1A1, AHH, AHRR, CP11, CYP1, P1-450, P450-C, P450DX cytochrome P450, family 1, subfamily A, polypeptide 1 (EC:1.14.14.1) C00002783
1869 E2F1, E2F-1, RBAP1, RBBP3, RBP3 E2F transcription factor 1 C00002783
1956 EGFR, ERBB, ERBB1, HER1, PIG61, mENA epidermal growth factor receptor (EC:2.7.10.1) C00002783
896 CCND3 cyclin D3 C00002783
3458 IFNG, IFG, IFI interferon, gamma C00002783
3569 IL6, BSF2, HGF, HSF, IFNB2, IL-6 interleukin 6 (interferon, beta 2) C00002783
3576 IL8, CXCL8, GCP-1, GCP1, LECT, LUCT, LYNAP, MDNCF, MONAP, NAF, NAP-1, NAP1 interleukin 8 C00002783
3689 ITGB2, CD18, LAD, LCAMB, LFA-1, MAC-1, MF17, MFI7 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) C00002783
894 CCND2, KIAK0002 cyclin D2 C00002783
196 AHR, bHLHe76 aryl hydrocarbon receptor C00002783
27035 NOX1, GP91-2, MOX1, NOH-1, NOH1 NADPH oxidase 1 C00002783
898 CCNE1, CCNE cyclin E1 C00002783
5925 RB1, OSRC, RB, p105-Rb, pRb, pp110 retinoblastoma 1 C00002783
5970 RELA, NFKB3, p65 v-rel avian reticuloendotheliosis viral oncogene homolog A C00002783
4087 SMAD2, JV18, JV18-1, MADH2, MADR2, hMAD-2, hSMAD2 SMAD family member 2 C00002783
4088 SMAD3, HSPC193, HsT17436, JV15-2, LDS1C, LDS3, MADH3 SMAD family member 3 C00002783
6648 SOD2, IPOB, MNSOD, MVCD6 superoxide dismutase 2, mitochondrial (EC:1.15.1.1) C00002783
7039 TGFA, TFGA transforming growth factor, alpha C00002783
7040 TGFB1, CED, DPD1, LAP, TGFB, TGFbeta transforming growth factor, beta 1 C00002783
6347 CCL2, GDCF-2, HC11, HSMCR30, MCAF, MCP-1, MCP1, SCYA2, SMC-CF chemokine (C-C motif) ligand 2 C00002783
405 ARNT, HIF-1-beta, HIF-1beta, HIF1-beta, HIF1B, HIF1BETA, TANGO, bHLHe2 aryl hydrocarbon receptor nuclear translocator C00002783
177 AGER, RAGE advanced glycosylation end product-specific receptor C00019064
836 CASP3, CPP32, CPP32B, SCA-1 caspase 3, apoptosis-related cysteine peptidase (EC:3.4.22.56) C00019064
841 CASP8, ALPS2B, CAP4, Casp-8, FLICE, MACH, MCH5 caspase 8, apoptosis-related cysteine peptidase (EC:3.4.22.61) C00019064
847 CAT catalase (EC:1.11.1.6) C00019064
1544 CYP1A2, CP12, P3-450, P450(PA) cytochrome P450, family 1, subfamily A, polypeptide 2 (EC:1.14.14.1) C00019064
1576 CYP3A4, CP33, CP34, CYP3A, CYP3A3, CYPIIIA3, CYPIIIA4, HLP, NF-25, P450C3, P450PCN1 cytochrome P450, family 3, subfamily A, polypeptide 4 (EC:1.14.13.67 1.14.13.97 1.14.13.32 1.14.13.157) C00019064
3065 HDAC1, GON-10, HD1, RPD3, RPD3L1 histone deacetylase 1 (EC:3.5.1.98) C00019064
3146 HMGB1, HMG1, HMG3, SBP-1 high mobility group box 1 C00019064
4233 MET, AUTS9, HGFR, RCCP2, c-Met met proto-oncogene (EC:2.7.10.1) C00019064
4780 NFE2L2, NRF2 nuclear factor, erythroid 2-like 2 C00019064
5052 PRDX1, MSP23, NKEF-A, NKEFA, PAG, PAGA, PAGB, PRX1, PRXI, TDPX2 peroxiredoxin 1 (EC:1.11.1.15) C00019064
5728 PTEN, 10q23del, BZS, CWS1, DEC, GLM2, MHAM, MMAC1, PTEN1, TEP1 phosphatase and tensin homolog (EC:3.1.3.67 3.1.3.16 3.1.3.48) C00019064
6401 SELE, CD62E, ELAM, ELAM1, ESEL, LECAM2 selectin E C00019064
7150 TOP1, TOPI topoisomerase (DNA) I (EC:5.99.1.2) C00019064
7153 TOP2A, TOP2, TP2A topoisomerase (DNA) II alpha 170kDa (EC:5.99.1.3) C00019064

Related Diseases

Diseases related to proteins in ChEMBL interactions

OMIM (14)

OMIM preferred title UniProt
#613546 Aromatase deficiency P11511
#139300 Aromatase excess syndrome; aexs P11511
#614466 Coronary heart disease, susceptibility to, 6; chds6 P08254
#603932 Intervertebral disc disease; idd P14780
#607785 Juvenile myelomonocytic leukemia; jmml Q06124
#151100 Leopard syndrome 1 Q06124
#611162 Malaria, susceptibility to P35228
#156250 Metachondromatosis; metcds Q06124
#613073 Metaphyseal anadysplasia 2; mandp2 P14780
#259600 Multicentric osteolysis, nodulosis, and arthropathy; mona P08253
#163950 Noonan syndrome 1; ns1 Q06124
#601399 Platelet disorder, familial, with associated myeloid malignancy Q01196
#183090 Spinocerebellar ataxia 2; sca2 Q99700
#602111 Spondyloepimetaphyseal dysplasia, missouri type P45452

KEGG DISEASE (16)

KEGG name UniProt
H00028 Choriocarcinoma P03956 (related)
P08253 (related)
H00025 Penile cancer P08253 (related)
P14780 (related)
P35354 (related)
H00472 Torg-Winchester syndrome P08253 (related)
H00599 46,XX disorders of sex development (Disorders related to androgen excess) P11511 (related)
H00794 Aromatase excess syndrome P11511 (related)
H00479 Metaphyseal dysplasias P14780 (related)
P45452 (related)
H00408 Type I diabetes mellitus P17706 (related)
H00017 Esophageal cancer P35228 (related)
P35354 (related)
H00046 Cholangiocarcinoma P35354 (related)
H00001 Acute lymphoblastic leukemia (ALL) (precursor B lymphoblastic leukemia) Q01196 (related)
Q01196 (marker)
H00003 Acute myeloid leukemia (AML) Q01196 (related)
Q01196 (marker)
Q13951 (marker)
H00004 Chronic myeloid leukemia (CML) Q01196 (related)
H00978 Thrombocytopenia (THC) Q01196 (related)
H00523 Noonan syndrome and related disorders Q06124 (related)
H01018 Metachondromatosis Q06124 (related)
H00063 Spinocerebellar ataxia (SCA) Q99700 (related)

Diseases related to CTD interactions

17 disease in interactions with metabolites

MESH or OMIM name KNApSAcK
metabolite
D007249 Inflammation C00002783
C00019064
D007674 Kidney Diseases C00019064
D014947 Wounds and Injuries C00002783
D002252 Carbon Tetrachloride Poisoning C00019064
D056486 Drug-Induced Liver Injury C00019064
D050171 Dyslipidemias C00019064
D018149 Glucose Intolerance C00019064
D006949 Hyperlipidemias C00019064
D007938 Leukemia C00002783
D008103 Liver Cirrhosis C00019064
D008106 Liver Cirrhosis, Experimental C00019064
D008107 Liver Diseases C00019064
D017202 Myocardial Ischemia C00019064
D009369 Neoplasms C00019064
D009765 Obesity C00019064
D011041 Poisoning C00019064
D011230 Precancerous Conditions C00019064