KEGG   Caenorhabditis elegans (nematode): CELE_W03C9.3
Entry
CELE_W03C9.3      CDS       T00019                                 
Symbol
rab-7
Name
(RefSeq) Ras-related protein Rab-7a
  KO
K07897  Ras-related protein Rab-7A
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel04137  Mitophagy - animal
cel04140  Autophagy - animal
cel04144  Endocytosis
cel04145  Phagosome
cel04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cel00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CELE_W03C9.3 (rab-7)
   04145 Phagosome
    CELE_W03C9.3 (rab-7)
   04140 Autophagy - animal
    CELE_W03C9.3 (rab-7)
   04137 Mitophagy - animal
    CELE_W03C9.3 (rab-7)
   04148 Efferocytosis
    CELE_W03C9.3 (rab-7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cel04131]
    CELE_W03C9.3 (rab-7)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cel04147]
    CELE_W03C9.3 (rab-7)
   04031 GTP-binding proteins [BR:cel04031]
    CELE_W03C9.3 (rab-7)
Membrane trafficking [BR:cel04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    CELE_W03C9.3 (rab-7)
Exosome [BR:cel04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CELE_W03C9.3 (rab-7)
  Exosomal proteins of other body fluids (saliva and urine)
   CELE_W03C9.3 (rab-7)
  Exosomal proteins of colorectal cancer cells
   CELE_W03C9.3 (rab-7)
  Exosomal proteins of bladder cancer cells
   CELE_W03C9.3 (rab-7)
GTP-binding proteins [BR:cel04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    CELE_W03C9.3 (rab-7)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU RsgA_GTPase cobW AAA_16 nSTAND3 Septin AAA_22 AAA_24 PduV-EutP AAA_7 NTP_transf_9 ATPase_2 DAP3 MCM NACHT AAA_5 SRPRB
Other DBs
NCBI-GeneID: 174834
NCBI-ProteinID: NP_496549
WormBase: WBGene00004271
Ensembl: WBGene00004271
UniProt: Q23146
Position
II:complement(11965523..11966931)
AA seq 209 aa
MSGTRKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTL
QIWDTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFP
FVLLGNKVDLESQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALARES
QETNDFPEFPDQIRLNPNQQNQQNSGCNC
NT seq 630 nt   +upstreamnt  +downstreamnt
atgtcgggaaccagaaagaaggcgctgctcaaagtgatcattctcggagattcgggcgtt
ggaaaaacatctttgatgaatcaatatgtaaatcggcgatttagtaatcaatataaggca
acgattggagccgacttcctcacacgcgacgtaaacattgacgacagaaccgtcactctt
cagatctgggatacagccggccaggaacgtttccaatcgctcggagtcgctttttatcgt
ggagccgattgctgtgtgctggcttttgacgtcacaaatgccgcctcgttcaaatcgctt
gactcgtggcgtgacgagtttctgattcaggctagcccccgcgatccagaccatttcccg
tttgtcctgctcggaaacaaggtggatttggagtcacagcgtgccgtttcgtcaaaacgt
gctcaatcttggtgccagacgaagggaaatattccgtattacgaggtttctgccaaggaa
gctctcaacgttgaagccgcatttttggcaattgctcgtgatgcgttggctagagaatct
caggaaaccaacgatttcccagagtttcccgaccaaatccgtctcaacccaaatcaacag
aaccagcagaattcgggatgcaattgttaa

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