KEGG   Exiguobacterium sibiricum: Exig_2416
Entry
Exig_2416         CDS       T00687                                 
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
esi  Exiguobacterium sibiricum
Pathway
esi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:esi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Exig_2416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:esi03400]
    Exig_2416
DNA repair and recombination proteins [BR:esi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Exig_2416
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Exig_2416
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD UB2H AAA_16 AAA P-loop_SecA AAA_30 DUF87 AAA_19 TrwB_AAD_bind HerA_C AAA_25 AAA_7 Ish1 AAA_22 HEM4 UvrD-helicase Phage_int_SAM_5 DUF3071
Other DBs
NCBI-ProteinID: ACB61866
UniProt: B1YLG1
Position
complement(2376363..2378330)
AA seq 655 aa
MDFELVSPFEPGGDQPEAIKKLIAGVKNGERHQTLLGATGTGKTFTVSNVIKEIKKPTLV
LAHNKTLAGQLYSEFKEFFPNNAVEYFVSFYDYYQPEAYVPSTDTFIEKDSSINDEIDKL
RHSATASLFEREDVLIVASVSCIYGLGNPEEYNNHVLSLRVGNEMGRNEMLRRLIDIQYE
RNDIDFQRGRFRVRGDVVEIFPASRDEQCVRIEFFGDEIERIRDMDPLTGEIIADREHIS
IFPASHFVTGDTRLQKAITNIEAELETQLAKMREDGMLLEAQRLEQRTNYDLEMMREMGY
CSGIENYSRHLNLMPPGSTPYTLIDYFPKDFLLVADESHVTLPQIRGMYNGDQARKQVLV
DHGFRLPSAKDNRPLRFEEFEEKVSQAIYISATPGPYEIEHTKEMVEQIIRPTGLVDPTI
EIHPITGQIDYLMDNIRERVAKNERVLVTTLTKKMSEDLTDYLKEHGVKVNYMHSEIKTL
ERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVTILDADKEGFLRSERSLIQTIGRAA
RNSEGHVILFADKMTDSMQRAIDETERRRNIQLAFNKEHGITPKTIQKDVRGVISTTIES
DDTVEKLEKFNKLKKPERETLLEQLDQEMRQAAKDMQFERAAELRDLILELKAGA
NT seq 1968 nt   +upstreamnt  +downstreamnt
atggattttgagttagtatcaccatttgaaccgggtggcgatcagccggaagcgattaaa
aaattgattgcaggcgtcaagaacggtgaacgccatcagacgttgctcggcgcgacaggg
acagggaaaacctttaccgtctcgaacgtcatcaaagagattaagaagccgacgctggtc
ttggcacacaataagacgcttgctggtcagctgtattcggagttcaaagagttcttccca
aataacgcggtcgaatatttcgtcagcttttatgattattaccaaccggaagcctatgta
ccgtcgacagatacgttcatcgaaaaagactcatcaatcaacgatgagattgacaagctg
cgtcactcagcgacagcttccctgttcgaacgggaagacgtcctgattgtcgcgtcggtg
tcgtgtatctatggtctcggtaatccggaagagtacaacaaccacgtgctgtcgctccgt
gtcggaaacgagatgggacgaaacgagatgttgcgtcgtctgatcgacattcaatatgaa
cgaaatgatatcgatttccagcgcgggcggttccgtgttcggggggatgtcgttgaaatc
ttcccggcgtcccgcgatgaacagtgtgtccggatcgaatttttcggagatgagattgaa
cgaatccgtgatatggacccattgacaggggaaatcattgccgaccgggaacacatatcg
attttcccggcatcccacttcgtgacgggggatacccgtctgcaaaaagcgattacgaac
attgaggctgagctcgaaacgcaactcgcgaagatgcgggaagacggtatgctgctcgaa
gcccagcggctcgaacagcggacgaattatgaccttgagatgatgcgcgagatgggttac
tgctcggggatcgaaaactattcccgtcacttgaacttaatgcccccgggctcgacaccg
tacacgttgatcgattacttcccgaaagactttttactggtcgccgatgagtcgcacgtg
acgttgccgcaaatccgcgggatgtacaacggggaccaggcccggaaacaagtcctcgtc
gaccacggcttccgtctgccgtcagcgaaggacaaccggccgctccggttcgaggaattt
gaggaaaaggtcagccaagcgatttatatctcggcgacacccggtccttacgaaatcgaa
catacaaaagagatggtcgaacaaatcatccgtccgaccggactcgttgatccgacgatc
gagattcatccgattaccggtcaaatcgactacttgatggataacatccgcgaacgtgtc
gcgaaaaatgaacgagtgctcgtgacgacattgacgaaaaaaatgtcggaggatttgacg
gattatctgaaggagcatggcgttaaggtcaactacatgcactcggaaatcaagacgctt
gagcggattgaaatcatccgcgatttacggctcgggaaatacgatgtcctcgtcgggatc
aacctgttgcgggaaggactggatattccggaagtctcactcgtgacgatacttgatgcc
gacaaggaaggattcctgcgttcggaacggtcactgattcagacgatcggtcgggcagcc
cgaaactcggaagggcacgtcattctgtttgccgataagatgaccgactcgatgcagcga
gcgattgatgaaacggaacggcggcgcaacattcagctcgcctttaataaagaacacggt
atcacgccgaaaacgattcaaaaggatgtccgtggtgtcatcagtacgacgatcgagagc
gacgatacagtcgaaaaactcgaaaagttcaacaaactgaaaaaaccggaacgcgaaacg
ttgctcgagcagctcgaccaagagatgcgtcaagcggcgaaagacatgcagtttgaacgg
gcagcagaattgcgtgaccttatcttagaattgaaagcaggtgcctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (34)   

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