KEGG   Candidatus Promineifilum breve: CFX0092_A1051
Entry
CFX0092_A1051     CDS       T05438                                 
Name
(GenBank) Helicase RecD/TraA family protein
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
pbf  Candidatus Promineifilum breve
Pathway
pbf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CFX0092_A1051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbf03400]
    CFX0092_A1051
Enzymes [BR:pbf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CFX0092_A1051
DNA repair and recombination proteins [BR:pbf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CFX0092_A1051
SSDB
Motif
Pfam: AAA_19 HHH_4 AAA_30 SH3_13 UvrD_C_2 HHH_5 Viral_helicase1 AAA_11 AAA_22 SLFN-g3_helicase T2SSE UvrD-helicase PhoH nSTAND3 AAA_28 AAA_16 NTPase_1 TrwB_AAD_bind DEAD AAA_7 Helicase_RecD RsgA_GTPase AAA_29 TrmB AAA Mg_chelatase UvrD_C TsaE AAA_18 cobW SRP54 ABC_tran AAA_5
Other DBs
NCBI-ProteinID: CUS02929
UniProt: A0A160T1A9
Position
I:complement(1209918..1212206)
AA seq 762 aa
MGDRAEVSGSIERVTYYNEESGYTVLRLRPDTRGMLPYAYGEQLLTVVGNLPEVNPGEWL
KLTGQWLMHPKHGRQFQVEQCEQSVPASVEGIKRYLGSGMVRGVGKVMAERIVNRFGADT
LTIIDENPQRLGEVLGIGRKRVDNVIKAWAEQRAIKDVMIFLQGHGISTHLAVKIYKQYG
DASLAVVQATPYRLVQDIHGIGFKTADKIAQALGLSPDDPARIEAGIHYTLSKMADDGHV
YAPQDELEPEAAEILQLPAERVTAVLESLENSELVRRETIVYQTADDRRQTTAGKSTNGG
DAVMREERAVYLPALYHSETGLTRQVKRLVEHPTSRLSGLRGGFVQAPLLDKGAGGRVAT
NPLTPQQEQAVNAAVSHKLTILTGGPGTGKTTTLNNLLNLLDATGHTYALASPTGRAAKR
MTEATGREARTIHRLLEFKPGEGFGRNENHPIDADLIVIDESSMLDLVLAYNLLRAIGSD
SHLLLVGDVDQLPSVGAGDVLRDLIESGVAAVVRLETIFRQAADSLIIRNAHRINRGLMP
ETTADGADSLPSDFYIFIKEDPGETADLLVDIVAKRAPTKFGLDPFDDIQVLAPMYNGLA
GVTRLNGLLQEALNPPGGRKIERRISGRTFRVGDKVMQTVNNYDKSVYNGDIGRITAIDV
IEQTMTVAIDGAPVVYSFLEVDELIHAYAVSVHKSQGSEYPCVVIPVVVQHYLMLQRNLL
YTAITRARKLVILVGTRRAIQIAVRTNPVVERHTALDWRLKK
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgggcgatcgcgcggaagtgagcggctccatcgagcgcgtcacgtactataacgaggag
agcggctacaccgtgttgcggctgcggcccgacacgcgcgggatgctgccctacgcttac
ggcgagcaactgctgaccgtcgtcggcaatctgcccgaagtgaaccccggcgaatggctg
aagctgaccgggcaatggctgatgcaccccaaacacggccgccagttccaggtggaacag
tgcgagcaatccgtgccggcctcggtcgagggcatcaagcgctatctcggttcgggcatg
gtgcgcggcgtgggcaaggtgatggccgagcgcatcgtcaaccgcttcggggccgacacg
ctgaccatcatcgatgagaatccgcaacggctgggcgaggtgctgggcatcggccgcaag
cgggtcgataacgtcatcaaagcctgggccgagcagcgggccatcaaggacgtgatgatt
ttcctgcaaggtcacggcatctccacccatttggcagtcaagatctacaagcaatacggc
gacgcgtcgctggccgtcgtccaggccacgccctaccggctggtgcaggacatccacggc
atcggcttcaagacggccgacaagatcgcccaggccctggggctctcgcccgacgacccg
gcgcgcatcgaggccggcatccactacaccctgagcaagatggccgacgacggccacgtc
tacgcgccgcaggacgaactggagccggaagcggccgaaattctgcaactgccggccgaa
cgggtgacggccgtgctggaatcgctggagaacagcgaattggtgcggcgggagacgatt
gtgtatcagaccgcggacgacagacggcagaccacggccggaaaatcaacgaatggcggg
gacgccgttatgcgcgaggagcgggcggtgtatctgccggccctctaccactccgagacg
gggctgacgcggcaggtgaagcggctggtggagcatccgacgagccgcctcagtggattg
aggggcggctttgtccaggcccctttgctcgacaagggcgcgggcggccgggtcgccacg
aacccgctgaccccccagcaggagcaggccgtcaacgccgccgtcagccacaagctgact
atcctgaccggcgggccgggcacgggcaagacgacgacgcttaacaacctgctcaacctg
ctggacgccaccggccatacctacgccctggcctcgcccaccggccgcgcggccaaacgc
atgaccgaggccaccgggcgcgaggcccgcaccatccaccgcctgctggagttcaagccg
ggcgagggcttcggccgcaacgaaaaccaccccatcgacgccgatctgatcgtcatcgat
gagtcgtcgatgctcgatctggtgctggcctataacctgctgcgggccatcggttccgac
agccacctgctgctggtgggcgacgtggatcagttgccgtccgtcggcgcgggtgacgtg
ctgcgcgacctgatcgagtcgggcgtggccgccgtggtgcggctggagacgatcttccgc
caggcggccgactcgctcatcatccgcaacgcccaccgcatcaatcgcggcctgatgccg
gagacgacggccgatggggcggactctttgccgagcgacttctacatcttcatcaaggaa
gaccccggcgagacggccgacctgctggtcgacatcgtcgccaagcgcgccccgaccaag
ttcggcctggatccgttcgacgacatccaggtgctggccccgatgtacaacgggctggcc
ggcgtcacgcgcctgaacgggctattgcaggaggcgctcaacccgcccggtgggcgcaag
atcgagcggcgcatcagcggccggacgtttcgcgtcggtgacaaggtgatgcaaacggtg
aacaattatgataaaagcgtttataatggggacatcggccgcatcaccgccatcgacgtc
atcgaacagacgatgactgtcgccatcgacggcgcgccggtagtctatagctttctggag
gtagacgaactgatccacgcctatgccgtcagcgttcacaagtcgcagggatcggagtat
ccgtgtgtggtcatcccggtggtggtgcagcattatctgatgctccagcgcaacctgctc
tacacggccatcacccgcgcccgcaagctggtgatcctggtcggcacgcgccgcgccatc
cagatcgccgtgcgcaccaaccccgtcgtcgagcggcatacggccctcgattggcggttg
aagaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (33)   
   Pfam (33)   
All databases (43)   

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