KEGG   Pseudomonas chlororaphis PCL1606: PCL1606_04930
Entry
PCL1606_04930     CDS       T03768                                 
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
pcz  Pseudomonas chlororaphis PCL1606
Pathway
pcz02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pcz00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PCL1606_04930
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcz02044]
    PCL1606_04930
Enzymes [BR:pcz01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     PCL1606_04930
Secretion system [BR:pcz02044]
 Type IV secretion system
  Trb secretion system protein
   PCL1606_04930
SSDB
Motif
Pfam: T2SSE TrwB_AAD_bind nSTAND3 AAA_16 FtsK_SpoIIIE Zeta_toxin AAA_30 AAA_28 DEAD ResIII IstB_IS21 AAA_25 CbiA ATPase AAA_7 ABC_tran MMR_HSR1 Phosphatase MobB AAA_19 GTP_EFTU Sigma54_activat AAA_29 Parvo_NS1 TsaE AAA_22 CLP1_P
Other DBs
NCBI-ProteinID: AKA21948
UniProt: A0A0D5XSA0
Position
520208..521254
AA seq 348 aa
MSAVPQFPPEPRSSAATSLDRRIQMLRTAMGPVIAAALEDPDVVEVMLNPDRTLWVDRLS
SGRAPLGVELPEADGERIIRLVAAHVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPA
FALRKRAVNIIGLDQYVADGILTAGQAEFLRRAVRERQNILIAGGTSTGKTTLANALLAE
IAATGDRVLVLEDTIELQCAARDHVPLRTRAGVVSMTELVRATMRLRPDRVIVGEVRGGE
ALDLIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALIAEAVNVVIHIAGR
GRKRHVESIARLNGFDAAGYRLADAMETPFPALPPPSSPSPDHPGELP
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgagtgccgttccgcagttcccgcccgagcctcgttcgtccgccgcgacctcgctggat
cgccgcatccagatgctgcgtaccgccatggggccggtgatcgccgccgcgctcgaagac
ccggacgtggtggaagtgatgctcaaccccgaccgcacactatgggtcgatcggctgtcg
tcgggccgtgcgccgttgggcgtggagctgcccgaagccgatggcgaacgcatcatccgg
ctggtcgcggcccacgtcggcgcggaagtgcatcgcggccaaccgctcctgaccgccgag
ctgccggaaaccggcgaacgcttcgagggcatcctgccgccggccgcgccaggcccggcg
ttcgcgctgcgcaagcgcgccgtgaacatcatcggcctggatcagtatgtggccgacggc
atcctcaccgccgggcaggccgagttcctgcgccgcgccgtgcgcgagcggcagaacatc
ctgatcgccggcggcaccagcaccggcaagaccacgctggcgaacgcgctgttggccgag
atcgccgccaccggcgatcgcgtgctggtgctcgaagacaccatcgagctgcaatgcgcg
gcccgcgaccatgtaccgctgcgcacccgcgccggcgtggtgtccatgaccgagctggtg
cgcgccacgatgcgcctgcgccccgaccgcgtgatcgtcggcgaagtgcgcggcggcgaa
gccctcgacctcatcaaagtgtggggcacggggcatccgggcggcatcgccacgatccac
gccggttccgcgctgggcgcgctgctgcgactcgaacagttgattctcgaagtcgcggtg
aatccgccgcgggcgctgatcgccgaagcggtcaacgtcgtcatccacatcgccggtcgt
ggccgcaagcgccacgtcgaaagcattgcccgcctcaatggcttcgacgccgccggctac
cgcctggcggacgcgatggaaacgccgtttcccgcgctgccgccgccttcttccccgtcc
cctgaccaccctggagaactgccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system