KEGG   Pectobacterium polaris: BJK05_21615
Entry
BJK05_21615       CDS       T05195                                 
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
ppoa  Pectobacterium polaris
Pathway
ppoa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppoa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BJK05_21615
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppoa03400]
    BJK05_21615
Enzymes [BR:ppoa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BJK05_21615
DNA repair and recombination proteins [BR:ppoa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BJK05_21615
SSDB
Motif
Pfam: RecD_N AAA_19 AAA_30 UvrD_C_2 Viral_helicase1 Helicase_RecD AAA_11 SH3_13 AAA_22 UvrD-helicase SLFN-g3_helicase AAA_16 nSTAND3 Herpes_Helicase DEAD PhoH MukB AAA_28 UvrD_C T2SSE CbiA FtsK_SpoIIIE ResIII AAA DUF87 SRP54 Flavi_DEAD Bcl-2 AAA_17 TrwB_AAD_bind AAA_14 ATPase NTPase_1 AAA_24
Other DBs
NCBI-ProteinID: ASY82429
Position
4948433..4950298
AA seq 621 aa
MIALLETALTRRLLRPLDVQFARMLADETKPDLLLAAACLSAHSGAGHVCLPLENLQAQT
LFDGREPELAQQLLTEAGLNTVAAWQQRLLASDAVSDGSQPTPLVLQGEKLYLQRSWQSE
GRVARFIASERDTIPVDESAIRAVLDRLFPDAGEEVNWQKVAAAVALTRRIAVISGGPGT
GKTTTVAKLLAALIELNTGETLRIQLAAPTGKAAARLTESLGQALHRLAVDPLLRDAFPQ
EATTLHRLLGAVTDSQRLRHHQDNPLHLDVLIVDEASMVDLPMMANVIAALPPHARIIFL
GDRDQLASVEAGAVLGDICRFAEAGYSRARAQQLQRLTGCQLDESGPEGQTTVSDSICLL
RRSYRFDPHSGIGQLALAVNGGDDARVRAVLNGEFADITCSPLTEAEEYQAMLAQCVEGY
RDYLQLVATGSTPDAVLLAFQRYRQLCALREGPFGVAGLNQRIEQALHQAGLIQRSRNPL
NRWYPGRPVMIERNDAALGLFNGDIGIAMLGESGELRVFFPLPNGETKDVTPSRLPPHET
AYAMTVHKSQGSEFDHTALVLPNHYLPVLTRELVYTAITRARQRLSLYTDVRILCRAVKT
PTQRYSGLEERISALMKGDTP
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgattgcgttacttgaaacggcactgacgcggcggttgctacgcccgctggatgttcag
ttcgccagaatgctggcagatgagacaaagcccgatttgctgttggccgctgcctgcctg
agcgctcattcgggggcggggcatgtgtgtttaccgctggagaacttgcaggcgcagacg
ctgtttgatggccgcgagcctgaactggcgcaacagctgctcacggaagcagggctcaat
acggttgccgcatggcagcagcgcttactggcgtctgatgccgtcagcgatggcagccag
ccgacgccgctagtgctgcaaggagaaaagctgtatttacagcgtagctggcagagtgaa
ggccgcgtggcgcggtttattgccagcgagcgcgatacgatccctgtcgatgaatctgcg
atccgagcggttctggatcggctgtttcctgacgctggcgaagaggttaactggcagaag
gtggccgcggctgtcgccttgacgcgccgtattgcggttatttccggcgggccggggacg
gggaaaaccacgacggtggccaaattgctggcggcgctaattgagctgaatacgggagaa
acgttacgtattcaactggctgcaccgaccgggaaagcggctgcacggctcacggagtcg
ctggggcaggcgctgcaccgtcttgcggtagaccctctgctgcgggatgcgtttccgcag
gaagcgacaacgctgcatcggcttttgggtgcggtgacagatagccaacgtctgcgtcac
catcaggacaacccgctgcatttggatgtgctgattgtggatgaggcgtctatggtcgat
ctgccgatgatggcaaatgtgatcgccgcgcttccgccacatgccagaattatctttctg
ggcgatcgcgatcagttggcgtccgtcgaggcgggggcggtgttgggcgatatctgtcgg
tttgcggaggctggctatagccgtgcgcgggcgcagcagttgcagcggctgacgggctgt
caactggatgaaagcggccctgaagggcagacgacggtcagtgacagtatttgtctgtta
cgccggagctaccgtttcgatccgcattccgggattgggcaactggcgctggcggttaac
ggcggtgatgatgcgcgtgtgcgtgcggtgctgaacggcgagtttgccgatatcacctgt
agcccgttaaccgaggctgaagagtatcaggccatgctggcacagtgcgtcgaagggtat
cgtgattatctacagcttgttgcgacgggatccacgccggatgctgtgctgcttgccttc
cagcgctatcgccagctgtgcgcattgcgcgaagggccatttggcgtagcagggctgaat
cagcgcattgagcaggctttgcatcaggctggactgattcagcgcagccgtaatccgctt
aaccgctggtatcccggccgaccggtcatgattgaacgtaacgatgccgcattgggtctg
ttcaatggggatatcggtatcgccatgctgggagaaagcggggaactgcgcgtatttttc
ccgttgccgaatggcgaaaccaaagacgttacgccaagccgtctgccgccgcatgaaacg
gcctatgcgatgacggtgcataaatcacagggatcggagttcgatcataccgcgctggtg
ctgccgaaccactatttacccgtgctgacgcgggagctggtatataccgccatcacgcgt
gcgcgccagcgtttgtcactctataccgatgtccgtattctctgccgagcggtgaaaacg
ccaacgcagcgctatagcggcctggaagagagaattagcgcactgatgaaaggtgacaca
ccttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (34)   
   Pfam (34)   
All databases (43)   

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