KEGG   Synechocystis sp. PCC 6803: sll0459
Entry
sll0459           CDS       T00004                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
syn  Synechocystis sp. PCC 6803
Pathway
syn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:syn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    sll0459 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syn03400]
    sll0459 (uvrB)
DNA repair and recombination proteins [BR:syn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     sll0459 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      sll0459 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 AAA_19 DEAD_2 AAA_25 AAA DUF2009 AAA_7 Lipoprotein_7 Kinesin DUF5761 DUF87
Other DBs
NCBI-ProteinID: BAA10309
CyanoBase: sll0459
UniProt: Q55170
Position
complement(2610706..2612715)
AA seq 669 aa
MTSDLFSLHAPFRPTGDQPTAIASLIESLQGEHKFQTLLGATGTGKTFTMASVIAELGRP
TLVLAHNKTLAAQLCNELRQFFPENAVEYFISYYDYYQPEAYIPVTDTYIEKTASINDEI
DMLRHSATRSLFERRDVIVVASISCIYGLGIPSQYLKAAVPLQVGAEYDPRLVIRDLVNV
QYSRNDVELQRGRFRLKGDVLEIVPAYEDRVIRIEFFGDEVEALRLIDPVSGEILQSLDR
ISIYPARHFVTPEETLEKACQQIQTEMEQQVAFLEKNNLLVEAQRLSQRTRYDLEMLREV
GYCNGVENYSRYLADRQAGEPPECLVDYFPEDWLLVIDESHVTIPQLRGMYNGDQARKKV
LIDHGFRLPSAADNRPLKAEEFWQKVKQCVFVSATPGVWEIEQSEARVIEQVIRPTGVLD
PEIFVRPTTGQVDDLYGEIQTRVKLKERVLITTLTKRMAEDLTDYFSERGIKVQYLHSEI
QSIQRIEILQALRDGEFDVLIGVNLLREGLDLPEVSLVAIMDADKEGFLRAERSLIQTIG
RAARHIRGQAILYADNFTDSMQKAIAETERRRKIQQEYNEKHGITPQPINKRANNAILQF
LDISRRLNSQQLEEVYEQAQDLPLEKIPDLIQQLEEKMQEAAKKQEFEVAAIYRDRIQHL
RDRLLGHKK
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgacttctgacctcttttccctccatgcgccctttcgtcctaccggagatcaacccacg
gcgatcgccagtttgatcgagtctttgcagggagagcacaagtttcaaaccctgctgggg
gcaacgggaacggggaaaaccttcaccatggcttcggttattgcggagttgggacgacca
acattggtattagcccacaataaaaccttggcggcccaattatgtaatgaattgcggcaa
ttttttcccgaaaacgcggttgaatacttcattagttattacgactattaccagccagaa
gcctatattcccgtcaccgatacctatatcgaaaaaacggcttctatcaacgatgagatt
gatatgttgcgtcactccgccacccgttctctgtttgaacgacgggatgtaattgtggta
gcttccatcagttgcatttacggtttgggtattcccagccaatatctcaaagcggccgtt
cctctgcaagtgggtgccgaatatgatccccgcctagtaattcgggatttggtcaatgtg
caatatagccgcaacgatgtggaattacaacggggacgatttcgcctcaaaggagatgtg
ttggaaattgtgccggcctatgaagatcgggtgattcgcatcgaattttttggtgacgaa
gtggaagctctacggttaattgatccggtcagcggcgaaattttgcaaagtttagacaga
atcagcatttatcccgcccgtcactttgtcaccccagaagaaaccctagaaaaagcctgt
cagcaaattcaaacggaaatggaacaacaggtagcttttttagaaaaaaataatctgttg
gtagaagctcaaagattaagtcaacgcacccgttatgacttggaaatgctccgagaagtg
ggctattgcaacggagtagaaaattattcccgctatctagccgatcgccaggcgggggaa
ccaccggaatgtttagtggattattttcccgaagattggttattagtaattgatgaatcc
catgtgactattccccaattgcggggtatgtataatggcgaccaggccagaaaaaaagtt
ttaattgaccatggctttcgtctgcccagtgcggcggataatcgccccctaaaagcagaa
gaattttggcaaaaagttaaacagtgtgtgtttgtttctgccactccgggagtttgggaa
atagagcaatcggaagcaagggtaattgagcaggtaattcgccccactggagttcttgat
ccggaaatttttgtccgtcccaccaccggccaggtggatgatttatacggggaaattcaa
accagggtaaagctgaaagaacgggtattaatcacaactttaactaaacggatggcggag
gatttaaccgattatttttctgaacggggcatcaaggttcaatatctccattccgagatt
caatctattcaacgtattgagattttacaagctttacgagacggggaatttgatgtgtta
attggggtaaatttattgcgggaagggttagatttaccggaagtttccctagtagctatt
atggatgcagataaagaaggctttttgcgggcagagcgttctttaattcaaaccattggc
cgggccgcccgtcatattcggggacaggcgattttatatgctgataatttcaccgacagt
atgcaaaaggcaatcgccgaaacggaaaggaggcggaaaatccaacaagaatataacgaa
aagcacggtattacccctcaaccgattaataaacgggctaacaatgccattttgcaattt
cttgatatttcccgtcgtttaaacagtcaacagttggaggaagtatatgaacaagcccag
gatttacccctagaaaaaatccccgatttaattcaacaattggaggaaaaaatgcaagaa
gcggccaaaaaacaggaatttgaagtagctgccatctaccgagaccgcattcaacatttg
cgtgatcggcttttgggccacaaaaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (18)   
   Pfam (18)   
All databases (31)   

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