KEGG   Thermosulfidibacter takaii: TST_1391
Entry
TST_1391          CDS       T04192                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
ttk  Thermosulfidibacter takaii
Pathway
ttk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ttk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    TST_1391 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ttk03400]
    TST_1391 (uvrB)
DNA repair and recombination proteins [BR:ttk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     TST_1391 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      TST_1391 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_22 Kinesin AAA_16 Oxidored_nitro AAA_33 AAA_30 Microtub_bd AAA DUF87 SWI2_SNF2 SLFN-g3_helicase AAA_5 AAA_7 Cauli_AT
Other DBs
NCBI-ProteinID: BAT72178
UniProt: A0A0S3QV18
Position
complement(1429965..1431974)
AA seq 669 aa
MKSFKLVSSYKPAGDQPKAIESLVRWVREGVPYMTLVGVTGSGKTFTMANVIAQLNRPTL
VISHNKTLAAQLYSEFKEFFPENAVEYFVSYYDYYQPEAYIPQRDLYIEKDCAINEDIDR
MRHSATSALLERRDVIIVATVSCIYGLGSPEAYYGMVLTLDVGEEISREEVIRRLVRILY
KRNDYDFTRGTFRVRGDVVEVYPSHLEDLALRIEFWGDEIEVLFLIDPLTGAVVDTVERF
TVYPASHYISTEDRMKKALLSIRLELEERVKELKEQGKHLEAQRLWQRTVFDLEMIQEVG
YCKGIENYSRHFTGRAPGEPPPTLIDYLPKDALIIIDESHVTVPQLRGMYEGDRSRKMNL
VEYGFRLPSALDNRPLTFDEFLSMVNQIIFVSATPGDWELEVSKPHIVEQIIRPTGLMDP
KVIVKPAKNQVEDLYLEIRKRVDRGERVLVTTLTKRMAEELTDYLLDLGIKVAYLHSEID
TIERTRIIRDLRKGVYDVIVGVNLLREGLDIPEVSLVAILDADKEGFLRSERSIIQTAGR
AARNVNGTVILYADTITGSMERAIREMERRRELQMEYNKKHGITPQTIKKSIRDILTSVY
EKDYYTVPIEEELVAQEDNPWEIEEKIKKLEKEMKQAANELAFEKAAVLRDEIKALKKRL
EQLLEARAN
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgaaaagttttaaactagtttcaagttacaaacccgctggagatcagccaaaagcgatt
gagagtttggtgagatgggtaagagaaggtgtgccatatatgacccttgtaggggttact
ggttcaggaaaaaccttcaccatggcaaatgtgatagcccagttgaacagacccactttg
gtgatttctcacaacaagactctggcggctcagctttactcagagttcaaggaattcttt
ccggaaaacgctgttgaatattttgtttcctattacgactactatcagccggaggcttac
atacctcagagggatctctatatagaaaaagactgtgctatcaatgaggatatagatcgt
atgagacattctgcgaccagtgctcttcttgagagaagggatgtcataattgtggctacc
gtatcctgtatttacggtttgggttctccggaagcttattacggaatggtgcttaccttg
gatgttggtgaagaaatatcccgagaagaggttataaggcgccttgttaggatattgtac
aaaagaaacgattacgattttacccgcggcactttccgagtgagaggagacgtcgtggaa
gtttatccaagtcatcttgaggatcttgctctgagaattgagttctggggtgacgagata
gaagtactatttcttatcgaccctctcacaggggcggtagtggacacggttgaaaggttt
actgtttacccagcaagtcactacatctctaccgaagataggatgaaaaaagcgttgctt
tccataagacttgagcttgaagaaagggtaaaggagctaaaagagcagggcaagcacctt
gaggctcaaagactttggcagcgtactgtgtttgaccttgagatgatacaggaggtgggg
tactgcaagggaattgagaattactcgcgccattttacaggcagagctccaggtgagcct
cctcccacactaatagattacctgccaaaggatgcccttattataattgatgaatctcac
gtaacagtaccccagcttagaggtatgtatgaaggagatagatccaggaaaatgaatctt
gtggagtatggattcaggttaccctctgccttggacaacaggccattaacctttgatgag
tttctctccatggtgaaccagattatctttgtgtccgccacccctggggactgggagctt
gaggtttcaaaacctcacatagtggagcagataatcagacccactggccttatggatcca
aaggtaattgttaagcctgccaagaaccaggtggaggatctctaccttgagattagaaag
agggtagataggggagagagggtgctggtaaccaccttgaccaaaaggatggccgaggag
ttaaccgactatcttttggatcttgggataaaggttgcgtatcttcattcagaaatagat
accatagagagaacccgtatcataagggatctcagaaaaggtgtatacgacgttatagtt
ggcgtaaatctcctcagggaagggctggatattcctgaggtttcacttgtggcaatactt
gatgctgataaggagggtttcttgagatcagaacggtcaatcattcagactgcaggaaga
gctgctagaaacgtcaatggaactgttattctttatgcagataccatcactggttctatg
gagagagccattagagagatggaaagaaggagagaactacaaatggagtacaacaagaaa
catggaatcacacctcaaaccattaaaaaatctattagagatatcctcacctctgtttac
gaaaaggattactataccgttcctattgaagaggagctggtggcacaagaggacaatcct
tgggagattgaagagaagattaaaaagctggaaaaagagatgaaacaggcagctaatgag
ctggcttttgaaaaggcggcagttttaagagatgagattaaagctttaaagaaacgtttg
gaacagctgcttgaggcaagggctaactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (48)   

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