KEGG   Trichosurus vulpecula (common brushtail): 118853553
Entry
118853553         CDS       T10126                                 
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp04010  MAPK signaling pathway
tvp04064  NF-kappa B signaling pathway
tvp04120  Ubiquitin mediated proteolysis
tvp04140  Autophagy - animal
tvp04144  Endocytosis
tvp04380  Osteoclast differentiation
tvp04620  Toll-like receptor signaling pathway
tvp04621  NOD-like receptor signaling pathway
tvp04622  RIG-I-like receptor signaling pathway
tvp04657  IL-17 signaling pathway
tvp04722  Neurotrophin signaling pathway
tvp04936  Alcoholic liver disease
tvp05132  Salmonella infection
tvp05133  Pertussis
tvp05135  Yersinia infection
tvp05140  Leishmaniasis
tvp05142  Chagas disease
tvp05145  Toxoplasmosis
tvp05152  Tuberculosis
tvp05160  Hepatitis C
tvp05161  Hepatitis B
tvp05162  Measles
tvp05168  Herpes simplex virus 1 infection
tvp05169  Epstein-Barr virus infection
tvp05170  Human immunodeficiency virus 1 infection
tvp05171  Coronavirus disease - COVID-19
tvp05200  Pathways in cancer
tvp05222  Small cell lung cancer
tvp05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
tvp05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118853553 (TRAF6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    118853553 (TRAF6)
   04064 NF-kappa B signaling pathway
    118853553 (TRAF6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118853553 (TRAF6)
   04140 Autophagy - animal
    118853553 (TRAF6)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    118853553 (TRAF6)
   04621 NOD-like receptor signaling pathway
    118853553 (TRAF6)
   04622 RIG-I-like receptor signaling pathway
    118853553 (TRAF6)
   04657 IL-17 signaling pathway
    118853553 (TRAF6)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    118853553 (TRAF6)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    118853553 (TRAF6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    118853553 (TRAF6)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    118853553 (TRAF6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    118853553 (TRAF6)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    118853553 (TRAF6)
   05161 Hepatitis B
    118853553 (TRAF6)
   05160 Hepatitis C
    118853553 (TRAF6)
   05171 Coronavirus disease - COVID-19
    118853553 (TRAF6)
   05162 Measles
    118853553 (TRAF6)
   05168 Herpes simplex virus 1 infection
    118853553 (TRAF6)
   05169 Epstein-Barr virus infection
    118853553 (TRAF6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118853553 (TRAF6)
   05135 Yersinia infection
    118853553 (TRAF6)
   05133 Pertussis
    118853553 (TRAF6)
   05152 Tuberculosis
    118853553 (TRAF6)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    118853553 (TRAF6)
   05140 Leishmaniasis
    118853553 (TRAF6)
   05142 Chagas disease
    118853553 (TRAF6)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    118853553 (TRAF6)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    118853553 (TRAF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tvp04131]
    118853553 (TRAF6)
   04121 Ubiquitin system [BR:tvp04121]
    118853553 (TRAF6)
Enzymes [BR:tvp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118853553 (TRAF6)
Membrane trafficking [BR:tvp04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    118853553 (TRAF6)
Ubiquitin system [BR:tvp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    118853553 (TRAF6)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 SlyX zf-RING_5 zf-TRAF_2 Sina_ZnF TRAF3_RING RING_XB3-XBAT31 zf-RING_11 PUMA_CC Med21 U-box DUF4455 PspA_IM30 DUF7310 zf-U1 DUF16 Spc29 ATG16 CEP104_ZnF CENP-Q Rhabdo_ncap_2 CENP-F_leu_zip zf-C2H2_4 Tropomyosin
Other DBs
NCBI-GeneID: 118853553
NCBI-ProteinID: XP_036619580
Position
6:complement(247907133..247927844)
AA seq 543 aa
MSLVNCEDSCGANQPDSDCCAAMASACSTGAKEDSVNGSTIPGNLSSSLMDEIQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLTVKCPNEGCLLKMELRHLEDHQTHCEFALAECPQCHLSFRKYLLHNHMLM
ECPRRQVSCVNCAAPMPFEEKEFHDQNCPLATVFCEYCNTMLIREQMPNHYDIDCPIAPI
PCTFSTFGCREKMQRNHLARHLQEDTLAHMRMMAQAIENISIAAFNSGLPPRETPPYDGS
SISRTSSGCPLDVQNFQETIQQLESRLVIQDHQIRELTAKMETQSACVGDLKRTIRTLED
RIAEMEAQQCNGIYIWKINNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPS
AQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAKPELLAF
QRPTIPRNPKGFGYVTFMHLQALRQRTFIKDDTLLVRCEVLTRLDMSSLRREGFQPRSTD
AGV
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgagtctggtaaactgtgaagacagctgcggtgccaaccagccagacagcgactgttgt
gctgccatggccagtgcctgtagcaccggcgcaaaggaggacagtgtgaatgggagcacc
attcctgggaacctttctagctccctgatggatgagattcaaggctatgatgtggagttt
gatccaccccttgaaagcaaatatgagtgtcccatctgtctgatggctttgcgggaagct
gtgcaaaccccatgtggccatcggttctgcaaagcctgcatcgtcaagtcaataagagat
gcaggtcacaaatgccctgtagacaatgaaatactgctggaaaatcagctatttcctgac
aactttgctaaacgggaaatcctctcacttacggtgaaatgtccgaatgaaggttgcctg
ctgaagatggaactgaggcatctagaggatcaccagacacattgtgagtttgcccttgca
gaatgcccacagtgccacctttcctttcggaaatatctccttcacaatcatatgctcatg
gaatgtccaaggagacaagtgtcatgtgtgaattgtgctgctccaatgccctttgaagag
aaagagttccatgaccagaactgcccattggcaacagtcttctgtgaatactgcaacacc
atgcttatccgggaacagatgcctaatcactatgatatagactgccccatagctccaatt
ccatgtactttcagtacatttgggtgtcgtgagaagatgcagaggaatcatttggcacgc
cacctgcaagaggacactctggcccacatgcgaatgatggcccaggccatcgagaatatc
agcattgcagctttcaattctgggctccccccccgggagacccctccctacgatggcagc
tccatatcccggacctcctcgggatgccccctggatgttcagaacttccaagaaaccatc
cagcagttggagagtcgccttgtgatacaagaccatcaaatccgagagctgactgctaag
atggaaacgcagagcgcttgtgtgggggacctcaaacggaccattcgaacccttgaggac
agaattgctgagatggaggcgcagcagtgcaatggcatttacatctggaagattaacaac
tttgggatgcacttgaaatctcaagaagaagagaagcctgtcgtcatccatagccctgga
ttctatactggcaaacctggctacaagctctgcatgcgccttcacctgcagctgccaagc
gctcagcgctgcgctaactatatttccctttttgtccacacgatgcaaggtgagtatgac
agccatcttccctggcccttccagggcacaatacgccttactattctcgatcagtctgaa
gcacctgtgaggcagaatcatgaagagatcatggatgccaaaccagagctgcttgccttc
cagaggcccaccatcccccggaaccccaaaggttttggctatgtgactttcatgcacttg
caagccctccggcaaaggaccttcattaaagatgatactttacttgttcgttgtgaggtt
ttgacacgcctggacatgagtagcctaaggagggagggctttcagccacgaagtactgat
gcaggggtatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (33)   
   Pfam (33)   
All databases (37)   

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