Anas platyrhynchos

Anas platyrhynchos

Scientific Name	Anas platyrhynchos [TAX:8839]
Lineage	cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
DBLINKS	KEGG GENOME: T02816

Known viruses (41)

Scientific Name	aalivirus A1 [TAX:1482734]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Aalivirus; Aalivirus apekidu
RefSeq	NC_023985 Duck picornavirus GL/12, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 24659102
Authors	Wang X, Liu N, Wang F, Ning K, Li Y, Zhang D
Title	Genetic characterization of a novel duck-origin picornavirus with six 2A proteins.
Journal	J Gen Virol. 2014 Jun;95(Pt 6):1289-1296.
DBLINKS	KEGG BRITE: NC_023985 ICTV: 202305589 ViralZone: family

Scientific Name	anativirus A1 [TAX:2870363]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Anativirus; Anativirus aductai
RefSeq	NC_006553 Anativirus A1 isolate TW90A, complete genome.
Evidence	Literature
Reference	PMID: 17686542
Authors	Tseng CH, Tsai HJ
Title	Sequence analysis of a duck picornavirus isolate indicates that it together with porcine enterovirus type 8 and simian picornavirus type 2 should be assigned to a new picornavirus genus.
Journal	Virus Res. 2007 Nov;129(2):104-14.
Comment	Culture cell line: DK cells
DBLINKS	KEGG BRITE: NC_006553 ICTV: 202302057 ViralZone: family

和名	水鳥ボルナウイルス1型
Scientific Name	Aquatic bird bornavirus 1 [TAX:1715293]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Bornaviridae; Orthobornavirus; Orthobornavirus avisaquaticae
RefSeq	NC_029642 Aquatic bird bornavirus 1, complete genome.
Evidence	Literature
Reference	PMID: 24158553
Authors	Guo J, Baroch J, Randall A, Tizard I
Title	Complete Genome Sequence of an Avian Bornavirus Isolated from a Healthy Canadian Goose (Branta canadensis).
Journal	Genome Announc. 2013 Oct 24;1(5).
Comment	Culture cell line: Duck embryo fibroblasts
DBLINKS	KEGG BRITE: NC_029642 ICTV: 202301559 ViralZone: family, genus

和名	水鳥ボルナウイルス2型
Scientific Name	Aquatic bird bornavirus 2 [TAX:1884917]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Bornaviridae; Orthobornavirus; Orthobornavirus avisaquaticae
RefSeq	NC_030691 Aquatic bird bornavirus 2, complete cds.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 25408146
Authors	Guo J, Shivaprasad HL, Rech RR, Heatley JJ, Tizard I, Payne S
Title	Characterization of a new genotype of avian bornavirus from wild ducks.
Journal	Virol J. 2014 Nov 19;11:197.
Comment	Culture cell line: Duck embryo fibroblasts
DBLINKS	KEGG BRITE: NC_030691 ICTV: 202301559 ViralZone: family, genus

和名	鳥アストロウイルス３型
Scientific Name	Avastrovirus 3 [TAX:1239439]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; Avastrovirus; Avastrovirus intestini
GenBank	FJ434664 Avastrovirus 3 strain C-NGB, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 19264607
Authors	Fu Y, Pan M, Wang X, Xu Y, Xie X, Knowles NJ, Yang H, Zhang D
Title	Complete sequence of a duck astrovirus associated with fatal hepatitis in ducklings.
Journal	J Gen Virol. 2009 May;90(Pt 5):1104-1108.
DBLINKS	ViralZone: genus, family

Scientific Name	avian paramyxovirus 1 [TAX:2560319]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Orthoavulavirus; Orthoavulavirus javaense
RefSeq	NC_039223 Newcastle disease virus isolate JSD0812, complete genome.
Evidence	Literature
Reference	PMID: 26634760
Authors	Liu M, Shen X, Cheng X, Li J, Dai Y
Title	Characterization and Sequencing of a Genotype VIId Newcastle Disease Virus Isolated from Laying Ducks in Jiangsu, China.
Journal	Genome Announc. 2015 Dec 3;3(6).
	Isolation and preliminary identification of a virulent Newcastle disease virus isolate of duck origin M Liu, YY Wei, YB Dai, X Cheng, S Zhou… - Chin J Anim Infect …, 2010 - en.cnki.com.cn
Comment	Laboratory host: Gallus gallus
DBLINKS	KEGG BRITE: NC_039223 ViralZone: family, genus

Scientific Name	avian paramyxovirus 16 [TAX:2560322]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Orthoavulavirus; Orthoavulavirus upoense
RefSeq	NC_039016 Avian paramyxovirus UPO216 isolate APMV-15/WB/Kr/UPO216/2014, complete genome.
Evidence	Literature
Reference	PMID: 28529504
Authors	Lee HJ, Kim JY, Lee YJ, Lee EK, Song BM, Lee HS, Choi KS
Title	A Novel Avian Paramyxovirus (Putative Serotype 15) Isolated from Wild Birds.
Journal	Front Microbiol. 2017;8:786.
Comment	Culture cell line: embryonated chicken eggs
DBLINKS	KEGG BRITE: NC_039016 ICTV: 202305576 ViralZone: family, genus

Scientific Name	avian paramyxovirus 9 [TAX:2560326]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Orthoavulavirus; Orthoavulavirus newyorkense
RefSeq	NC_025390 Avian paramyxovirus 9 strain duck/New York/22/1978, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 19185593
Authors	Samuel AS, Kumar S, Madhuri S, Collins PL, Samal SK
Title	Complete sequence of the genome of avian paramyxovirus type 9 and comparison with other paramyxoviruses.
Journal	Virus Res. 2009 Jun;142(1-2):10-8.
Comment	Culture cell line: SPF embryonated chicken eggs, CEK, DF-1, Vero, BHK21 cells
DBLINKS	KEGG BRITE: NC_025390 ICTV: 202301599 ViralZone: family, genus

和名	あひるA型肝炎ウイルス
Scientific Name	Avihepatovirus A [TAX:691956]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Avihepatovirus; Avihepatovirus ahepati
GenBank	HQ654774 Duck hepatitis A virus strain JS2010, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 29186963
Authors	Zhang R, Xia L, Chen J, Gong Y, Zhang L, Li P, Liu H, Xie Z, Jiang S
Title	Molecular epidemiology and genetic diversity of duck hepatitis A virus type 3 in Shandong province of China, 2012-2014.
Journal	Acta Virol. 2017;61(4):463-472.
DBLINKS	ViralZone: genus, family

Scientific Name	Cabassou virus [TAX:60879]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus; Alphavirus cabassou
RefSeq	NC_038670 Cabassou virus strain CaAr 508, complete genome.
Evidence	Literature
Reference	PMID: 9886206
Authors	Kinney RM, Pfeffer M, Tsuchiya KR, Chang GJ, Roehrig JT
Title	Nucleotide sequences of the 26S mRNAs of the viruses defining the Venezuelan equine encephalitis antigenic complex.
Journal	Am J Trop Med Hyg. 1998 Dec;59(6):952-64.
Comment	Culture cell line: Pekin duck embryo cell
DBLINKS	KEGG BRITE: NC_038670 ICTV: 202305086 ViralZone: family, genus

Scientific Name	Duck adenovirus 1 [TAX:130329]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Barthadenovirus; Barthadenovirus galloanserae; Duck atadenovirus A
GenBank	Y09598 Avian adenovirus EDS complete genome.
Evidence	Literature
Reference	PMID: 9375018
Authors	Hess M, Blöcker H, Brandt P
Title	The complete nucleotide sequence of the egg drop syndrome virus: an intermediate between mastadenoviruses and aviadenoviruses.
Journal	Virology. 1997 Nov 10;238(1):145-56.
DBLINKS	ViralZone: genus, family

Scientific Name	Duck astrovirus [TAX:1239441]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; Avastrovirus; Avastrovirus intestini; Avastrovirus 3
GenBank	KF753804 Duck astrovirus strain SL1, complete genome.
Evidence	Literature
Reference	PMID: 26814629
Authors	Liu N, Jiang M, Wang M, Wang F, Zhang B, Zhang D
Title	Isolation and detection of duck astrovirus CPH: implications for epidemiology and pathogenicity.
Journal	Avian Pathol. 2016;45(2):221-7.
DBLINKS	ViralZone: genus, family

Scientific Name	Duck astrovirus 1 [TAX:707882]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; Avastrovirus; unclassified Avastrovirus; Duck astrovirus GII.A
GenBank	FJ919226 Duck astrovirus 1 strain DA07, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 23166244
Authors	Chen L, Xu Q, Zhang R, Li J, Xie Z, Wang Y, Zhu Y, Jiang S
Title	Complete genome sequence of a duck astrovirus discovered in eastern China.
Journal	J Virol. 2012 Dec;86(24):13833-4.
DBLINKS	ViralZone: genus, family

Scientific Name	Duck astrovirus C-NGB [TAX:622438]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; Avastrovirus; unclassified Avastrovirus; Duck astrovirus GII.A
RefSeq	NC_012437 Duck astrovirus C-NGB, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_012437 ViralZone: genus, family

Scientific Name	Duck atadenovirus A [TAX:130328]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Barthadenovirus; Barthadenovirus galloanserae
RefSeq	AC_000004 Duck adenovirus A, complete genome. NC_001813 Duck adenovirus A, complete genome.
Evidence	Literature
Reference	PMID: 31814632
Authors	Chénier S, Desroches M, Provost C, Bournival V, St-Sauveur VG, Koszegi M, Gagnon CA
Title	First reported outbreak of Duck atadenovirus A tracheobronchitis in 3-week-old ducklings in Québec including whole genome sequence of the virus.
Journal	Can Vet J. 2019 Dec;60(12):1285-1288.
DBLINKS	KEGG BRITE: AC_000004 NC_001813 ICTV: 202302391 ViralZone: genus, family

Scientific Name	Duck circovirus [TAX:324685]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus duck
RefSeq	NC_007220 Duck circovirus, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_007220 ViralZone: genus, family

Scientific Name	Duck coronavirus [TAX:300188]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus; Gammacoronavirus galli; Avian coronavirus
RefSeq	NC_048214 Duck coronavirus isolate DK/GD/27/2014, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 26053682
Authors	Zhuang QY, Wang KC, Liu S, Hou GY, Jiang WM, Wang SC, Li JP, Yu JM, Chen JM
Title	Genomic Analysis and Surveillance of the Coronavirus Dominant in Ducks in China.
Journal	PLoS One. 2015;10(6):e0129256.
DBLINKS	KEGG BRITE: NC_048214 ICTV: 202307499 ViralZone: genus, family

Scientific Name	Duck egg-drop syndrome virus [TAX:1207926]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus tembusu; Tembusu virus
GenBank	JQ920421 Duck egg-drop syndrome virus strain duan, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Duck faeces associated circular DNA virus 1 [TAX:1843768]
Lineage	Viruses; unclassified viruses
RefSeq	NC_030131 Duck faeces associated circular DNA virus 1 isolate 7_Fec4_duck, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27211884
Authors	Steel O, Kraberger S, Sikorski A, Young LM, Catchpole RJ, Stevens AJ, Ladley JJ, Coray DS, Stainton D, Dayaram A, Julian L, van Bysterveldt K, Varsani A
Title	Circular replication-associated protein encoding DNA viruses identified in the faecal matter of various animals in New Zealand.
Journal	Infect Genet Evol. 2016 Sep;43:151-64.
DBLINKS	KEGG BRITE: NC_030131

Scientific Name	Duck faeces associated circular DNA virus 2 [TAX:1843769]
Lineage	Viruses; unclassified viruses
RefSeq	NC_030133 Duck faeces associated circular DNA virus 2 isolate 4_Fec60467_duck, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27211884
Authors	Steel O, Kraberger S, Sikorski A, Young LM, Catchpole RJ, Stevens AJ, Ladley JJ, Coray DS, Stainton D, Dayaram A, Julian L, van Bysterveldt K, Varsani A
Title	Circular replication-associated protein encoding DNA viruses identified in the faecal matter of various animals in New Zealand.
Journal	Infect Genet Evol. 2016 Sep;43:151-64.
DBLINKS	KEGG BRITE: NC_030133

Scientific Name	Duck faeces associated circular DNA virus 3 [TAX:1843770]
Lineage	Viruses; unclassified viruses
RefSeq	NC_030134 Duck faeces associated circular DNA virus 3 isolate 4_Fec60467_duck2, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27211884
Authors	Steel O, Kraberger S, Sikorski A, Young LM, Catchpole RJ, Stevens AJ, Ladley JJ, Coray DS, Stainton D, Dayaram A, Julian L, van Bysterveldt K, Varsani A
Title	Circular replication-associated protein encoding DNA viruses identified in the faecal matter of various animals in New Zealand.
Journal	Infect Genet Evol. 2016 Sep;43:151-64.
DBLINKS	KEGG BRITE: NC_030134

Scientific Name	Duck flavivirus TA [TAX:1150860]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus tembusu; Tembusu virus
GenBank	JQ289550 Duck flavivirus TA, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 22354941
Authors	Liu M, Liu C, Li G, Li X, Yin X, Chen Y, Zhang Y
Title	Complete genomic sequence of duck flavivirus from china.
Journal	J Virol. 2012 Mar;86(6):3398-9.
DBLINKS	ViralZone: family, genus

和名	あひるウイルス性肝炎ウイルス3型
Scientific Name	Duck hepatitis A virus 3 [TAX:1006063]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Avihepatovirus; Avihepatovirus ahepati; Avihepatovirus A
GenBank	DQ256132 Duck hepatitis A virus 3 isolate AP-03337, complete genome. DQ256133 Duck hepatitis A virus 3 isolate AP-04009, complete genome. DQ256134 Duck hepatitis A virus 3 isolate AP-04203, complete genome. DQ812093 Duck hepatitis A virus 3 isolate AP-04114, complete genome. GQ122332 Duck hepatitis A virus 3 strain GD, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 17626480
Authors	Kim MC, Kwon YK, Joh SJ, Kwon JH, Kim JH, Kim SJ
Title	Development of one-step reverse transcriptase-polymerase chain reaction to detect duck hepatitis virus type 1.
Journal	Avian Dis. 2007 Jun;51(2):540-5.
Comment	Strain:DRL-62 and R85952
DBLINKS	ICTV: 202301965 ViralZone: genus, family

Scientific Name	Duck hepatitis virus 2 strain 04G [TAX:427748]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Avihepatovirus; Avihepatovirus ahepati; Avihepatovirus A; Duck hepatitis A virus 2
GenBank	EF067923 Duck hepatitis virus 1 strain 04G, complete genome.
Evidence	Literature
Reference	PMID: 17292992
Authors	Tseng CH, Tsai HJ
Title	Molecular characterization of a new serotype of duck hepatitis virus.
Journal	Virus Res. 2007 Jun;126(1-2):19-31.
Comment	Culture cell line:duckling primary kidney (DK)
DBLINKS	ViralZone: genus, family

Scientific Name	Duck hepatitis virus 2 strain 90D [TAX:427749]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Avihepatovirus; Avihepatovirus ahepati; Avihepatovirus A; Duck hepatitis A virus 2
GenBank	EF067924 Duck hepatitis virus 1 strain 90D, complete genome.
Evidence	Literature
Reference	PMID: 21708221
Authors	Wang M, Zhang J, Zhou JH, Chen HT, Ma LN, Ding YZ, Liu WQ, Gu YX, Zhao F, Liu YS
Title	Analysis of codon usage in type 1 and the new genotypes of duck hepatitis virus.
Journal	Biosystems. 2011 Oct;106(1):45-50.
DBLINKS	ICTV: 202301965 ViralZone: genus, family

Scientific Name	Duck hepatitis virus DHV-HSS [TAX:398066]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Avihepatovirus; Avihepatovirus ahepati; Avihepatovirus A; avihepatovirus A1
GenBank	DQ812092 Duck hepatitis virus DHV-HSS, complete genome.
Evidence	Literature
Reference	PMID: 21708221
Authors	Wang M, Zhang J, Zhou JH, Chen HT, Ma LN, Ding YZ, Liu WQ, Gu YX, Zhao F, Liu YS
Title	Analysis of codon usage in type 1 and the new genotypes of duck hepatitis virus.
Journal	Biosystems. 2011 Oct;106(1):45-50.
DBLINKS	ViralZone: genus, family

Scientific Name	Duck hepatitis virus G [TAX:542654]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Avihepatovirus; Avihepatovirus ahepati; Avihepatovirus A; Duck hepatitis A virus 3
GenBank	EU755009 Duck hepatitis virus G, complete genome.
Evidence	Literature
Reference	PMID: 21708221
Authors	Wang M, Zhang J, Zhou JH, Chen HT, Ma LN, Ding YZ, Liu WQ, Gu YX, Zhao F, Liu YS
Title	Analysis of codon usage in type 1 and the new genotypes of duck hepatitis virus.
Journal	Biosystems. 2011 Oct;106(1):45-50.
DBLINKS	ViralZone: genus, family

Scientific Name	Duck hepatitis virus SD01 [TAX:673840]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Avihepatovirus; Avihepatovirus ahepati; Avihepatovirus A; Duck hepatitis A virus 3
GenBank	GQ485310 Duck hepatitis virus SD01, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 21708221
Authors	Wang M, Zhang J, Zhou JH, Chen HT, Ma LN, Ding YZ, Liu WQ, Gu YX, Zhao F, Liu YS
Title	Analysis of codon usage in type 1 and the new genotypes of duck hepatitis virus.
Journal	Biosystems. 2011 Oct;106(1):45-50.
DBLINKS	ViralZone: genus, family

Scientific Name	Duck hepatitis virus SD02 [TAX:673841]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Avihepatovirus; Avihepatovirus ahepati; Avihepatovirus A; Duck hepatitis A virus 3
GenBank	GQ485311 Duck hepatitis virus SD02, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Duck infectious anemia virus [TAX:1400257]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Reticuloendotheliosis virus group; unclassified Reticuloendotheliosis virus group
GenBank	KF313137 Duck infectious anemia virus strain ATCC-VR775, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 24013706
Authors	Niewiadomska AM, Gifford RJ
Title	The extraordinary evolutionary history of the reticuloendotheliosis viruses.
Journal	PLoS Biol. 2013;11(8):e1001642.
DBLINKS	ViralZone: family, genus

Scientific Name	Duck Tembusu virus [TAX:1399582]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus tembusu; Tembusu virus
GenBank	KC990542 Duck Tembusu virus strain GX_2011, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 23990944
Authors	Yu K, Sheng ZZ, Huang B, Ma X, Li Y, Yuan X, Qin Z, Wang D, Chakravarty S, Li F, Song M, Sun H
Title	Structural, antigenic, and evolutionary characterizations of the envelope protein of newly emerging Duck Tembusu Virus.
Journal	PLoS One. 2013;8(8):e71319.
DBLINKS	ViralZone: family, genus

Scientific Name	Everglades virus [TAX:2083198]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus; Alphavirus everglades
RefSeq	NC_038671 Everglades virus, complete sequence.
Evidence	Literature
Reference	PMID: 9886206
Authors	Kinney RM, Pfeffer M, Tsuchiya KR, Chang GJ, Roehrig JT
Title	Nucleotide sequences of the 26S mRNAs of the viruses defining the Venezuelan equine encephalitis antigenic complex.
Journal	Am J Trop Med Hyg. 1998 Dec;59(6):952-64.
Comment	Culture cell line: Vero, Peikin duck embryo, BHK-21 cells
DBLINKS	KEGG BRITE: NC_038671 ICTV: 202305090 ViralZone: family, genus

Scientific Name	Faeces associated gemycircularvirus 14 [TAX:1843734]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemygorvirus; Gemygorvirus malas1; Mallard associated gemygorvirus 1
RefSeq	NC_030138 Faeces associated gemycircularvirus 14 isolate 4_Fec7_duck, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_030138 ICTV: 202303600 ViralZone: family, genus

Scientific Name	Flavivirus White Kaiya duck/WR/China/2010 [TAX:1231621]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus tembusu; Tembusu virus
GenBank	JX196334 Flavivirus White Kaiya duck/WR/China/2010, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Goose paramyxovirus SF02 [TAX:204987]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; unclassified Avulavirinae
RefSeq	NC_005036 Goose paramyxovirus SF02, complete genome.
Evidence	Literature
Reference	PMID: 15744558
Authors	Zou J, Shan S, Yao N, Gong Z
Title	Complete genome sequence and biological characterizations of a novel goose paramyxovirus-SF02 isolated in China.
Journal	Virus Genes. 2005 Jan;30(1):13-21.
Comment	Duck
DBLINKS	KEGG BRITE: NC_005036 ViralZone: family

Scientific Name	Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) [TAX:370213]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Alphainfluenzavirus; Alphainfluenzavirus influenzae; Influenza A virus; H6N2 subtype
GenBank	CY011112 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 4, complete sequence. CY011113 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 7, complete sequence. CY011114 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 6, complete sequence. CY011115 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 5, complete sequence. CY011116 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 8, complete sequence. CY011117 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 3, complete sequence. CY011118 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 2, complete sequence. CY011119 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 1, complete sequence.
Evidence	GenBank
DBLINKS	ViralZone: genus

Scientific Name	Mallard associated gemycircularvirus 1 [TAX:1985386]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemycircularvirus; Gemycircularvirus malas1
RefSeq	NC_025733 Mallard associated gemycircularvirus 1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_025733 ICTV: 202303568 ViralZone: family, genus

Scientific Name	megrivirus A2 [TAX:2902768]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Kodimesavirinae; Megrivirus; Megrivirus aturhepa; Megrivirus A
RefSeq	NC_024120 Megrivirus A2 strain LY, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 24933161
Authors	Liao Q, Zheng L, Yuan Y, Shi J, Zhang D
Title	Genomic characterization of a novel picornavirus in Pekin ducks.
Journal	Vet Microbiol. 2014 Aug 6;172(1-2):78-91.
DBLINKS	KEGG BRITE: NC_024120 ICTV: 202302028 ViralZone: family, genus

Scientific Name	Mosso das Pedras virus [TAX:2083199]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus; Alphavirus mossopedras
RefSeq	NC_038857 Mosso das Pedras virus, complete sequence.
Evidence	Literature
Reference	PMID: 9886206
Authors	Kinney RM, Pfeffer M, Tsuchiya KR, Chang GJ, Roehrig JT
Title	Nucleotide sequences of the 26S mRNAs of the viruses defining the Venezuelan equine encephalitis antigenic complex.
Journal	Am J Trop Med Hyg. 1998 Dec;59(6):952-64.
Comment	Culture cell line: Vero cells, Pekin duck embryo cell monolayers, baby hamster kidney-21 cells
Evidence	Literature
Reference	PMID: 14680121
Authors	Fernández Z, Moncayo AC, Carrara AS, Forattini OP, Weaver SC
Title	Vector competence of rural and urban strains of Aedes (Stegomyia) albopictus (Diptera: Culicidae) from São Paulo State, Brazil for IC, ID, and IF subtypes of Venezuelan equine encephalitis virus.
Journal	J Med Entomol. 2003 Jul;40(4):522-7.
Comment	Culture cell line: Vero cells, Pekin duck embryo cell monolayers, baby hamster kidney-21 cells
DBLINKS	KEGG BRITE: NC_038857 ICTV: 202305097 ViralZone: family, genus

Scientific Name	Mulard duck circovirus [TAX:232802]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus duck; Duck circovirus
RefSeq	NC_005053 Mulard duck circovirus, complete genome.
Evidence	Literature
Reference	PMID: 14648300
Authors	Hattermann K, Schmitt C, Soike D, Mankertz A
Title	Cloning and sequencing of Duck circovirus (DuCV).
Journal	Arch Virol. 2003 Dec;148(12):2471-80.
Evidence	Literature
Reference	PMID: 39143430
Authors	Varsani A, Harrach B, Roumagnac P, Benkő M, Breitbart M, Delwart E, Franzo G, Kazlauskas D, Rosario K, Segalés J, Dunay E, Rukundo J, Goldberg TL, Fehér E, Kaszab E, Bányai K, Krupovic M
Title	2024 taxonomy update for the family Circoviridae.
Journal	Arch Virol. 2024 Aug 14;169(9):176.
DBLINKS	KEGG BRITE: NC_005053 ICTV: 202302916 ViralZone: genus, family

Scientific Name	Turlock virus [TAX:35320]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Bunyaviricetes; Elliovirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus turlockense
RefSeq	NC_078888 Turlock orthobunyavirus segment S, complete sequence. NC_078889 Turlock orthobunyavirus segment L, complete sequence. NC_078890 Turlock orthobunyavirus segment M, complete sequence.
Evidence	Literature
Reference	PMID: 6411942
Authors	Scott TW, McLean RG, Francy DB, Mitchell CJ, Card CS
Title	Experimental infections of birds with Turlock virus.
Journal	J Wildl Dis. 1983 Apr;19(2):82-5.
Comment	Culture cell line: Pekin duck embryo cells Culture cell line: Pekin duck embryo cells
DBLINKS	KEGG BRITE: NC_078888 NC_078889 NC_078890 ICTV: 202300134 ViralZone: genus, family