Bos taurus

Scientific Name	Bos taurus [TAX:9913]
Lineage	cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
DBLINKS	KEGG GENOME: T01008

Known viruses (200)

Scientific Name	Adelaide River virus [TAX:31612]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Ephemerovirus; Ephemerovirus adelaide
RefSeq	NC_028246 Adelaide River virus isolate DPP61, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 9049348
Authors	Wang Y, Cowley JA, Walker PJ
Title	Adelaide River virus nucleoprotein gene: analysis of phylogenetic relationships of ephemeroviruses and other rhabdoviruses.
Journal	J Gen Virol. 1995 Apr;76 ( Pt 4):995-9.
DBLINKS	KEGG BRITE: NC_028246 ICTV: 202301682 ViralZone: genus, family

Scientific Name	Aino virus [TAX:11582]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus ainoense
RefSeq	NC_018459 Aino virus Gn-Gc-NSm gene for M polyprotein, segment M, genomic RNA, isolate 38K. NC_018460 Aino virus N and NSs genes, segment S, genomic RNA, isolate 38K. NC_018465 Aino virus RdRp gene for RNA-dependent RNA polymerase, segment L, genomic RNA, isolate 38K.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 9819769
Authors	Uchinuno Y, Noda Y, Ishibashi K, Nagasue S, Shirakawa H, Nagano M, Ohe R
Title	Isolation of Aino virus from an aborted bovine fetus.
Journal	J Vet Med Sci. 1998 Oct;60(10):1139-40.
Evidence	Literature
Reference	PMID: 23017842
Authors	Goller KV, Höper D, Schirrmeier H, Mettenleiter TC, Beer M
Title	Schmallenberg virus as possible ancestor of Shamonda virus.
Journal	Emerg Infect Dis. 2012 Oct;18(10):1644-6.
DBLINKS	KEGG BRITE: NC_018459 NC_018460 NC_018465 ICTV: 202306382 ViralZone: genus, family

Scientific Name	Akabane virus [TAX:70566]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus akabaneense
RefSeq	NC_009894 Akabane virus segment L, complete sequence. NC_009895 Akabane virus segment M, complete sequence. NC_009896 Akabane virus segment S, complete sequence.
Evidence	Literature
Reference	PMID: 17216138
Authors	Ogawa Y, Kato K, Tohya Y, Akashi H
Title	Sequence determination and functional analysis of the Akabane virus (family Bunyaviridae) L RNA segment.
Journal	Arch Virol. 2007;152(5):971-9.
DBLINKS	KEGG BRITE: NC_009894 NC_009895 NC_009896 ICTV: 202300090 ViralZone: genus, family

Scientific Name	Alcelaphine gammaherpesvirus 1 [TAX:35252]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Gammaherpesvirinae; Macavirus; Macavirus alcelaphinegamma1
RefSeq	NC_002531 Alcelaphine herpesvirus 1, complete genome.
Evidence	Other
Comment	Culture cell line: MDBK bovine epithelial kidney cells
DBLINKS	KEGG BRITE: NC_002531 ICTV: 202301492 ViralZone: family, genus

Scientific Name	Almpiwar virus [TAX:318843]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Sripuvirus; Sripuvirus almpiwar
RefSeq	NC_025391 Almpiwar virus isolate MRM4059, complete genome.
Evidence	Literature
Reference	McAllister, J., Gauci, P. J., Mitchell, I. R., Boyle, D. B., Bulach, D. M., Weir, R. P., ... & Gubala, A. J. (2014). Genomic characterisation of Almpiwar virus, Harrison Dam virus and Walkabout Creek virus; three novel rhabdoviruses from northern Australia. Virology Reports, 3, 1-17.
Comment	Laboratory host: Culex quinquefasciatus Culture cell line: BSR cells
DBLINKS	KEGG BRITE: NC_025391 ICTV: 202301768 ViralZone: family, genus

Scientific Name	Alston virus [TAX:2495433]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Rubulavirinae; Orthorubulavirus; Orthorubulavirus alstonvillense
RefSeq	NC_055508 Alston virus isolate Alstonville, complete genome.
Evidence	Literature
Reference	PMID: 30487438
Authors	Johnson RI, Tachedjian M, Rowe B, Clayton BA, Layton R, Bergfeld J, Wang LF, Marsh GA
Title	Alston Virus, a Novel Paramyxovirus Isolated from Bats Causes Upper Respiratory Tract Infection in Experimentally Challenged Ferrets.
Journal	Viruses. 2018 Nov 28;10(12).
Comment	Culture cell line: MDBK, MDCK, PK15a, HeLa, Paki, and Vero cells
DBLINKS	KEGG BRITE: NC_055508 ViralZone: family, genus

Scientific Name	Anaconda paramyxovirus [TAX:1529450]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Feraresvirinae; Ferlavirus; Ferlavirus reptilis
GenBank	KJ956407 Anaconda paramyxovirus isolate RF111111, complete genome.
Evidence	Literature
Reference	PMID: 25078906
Authors	Woo PC, Lau SK, Martelli P, Hui SW, Lau CC, Fan RY, Groff JM, Tam EW, Chan KH, Yuen KY
Title	Fatal systemic necrotizing infections associated with a novel paramyxovirus, anaconda paramyxovirus, in green anaconda juveniles.
Journal	J Clin Microbiol. 2014 Oct;52(10):3614-23.
Comment	Culture cell line: BHK21, HF, Calu-3, A549, Hep-2, Caco-2, HRT-18G, Huh-7, Hela, HEK, NT2, RD, SF268, His-1, MDCK, MDBK, RK13, 3T3, Dubca, LLC-MK2, Vero, VeroE6, CRFK, PK-15, RK3E, RMC,DF-1, C6/36 cells
DBLINKS	ViralZone: family, genus

Scientific Name	Antarctic penguin virus A [TAX:2006072]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Orthoavulavirus; Orthoavulavirus borisense; Avian orthoavulavirus 17
RefSeq	NC_039017 Antarctic penguin virus A, complete genome.
Evidence	Literature
Reference	PMID: 28628443
Authors	Neira V, Tapia R, Verdugo C, Barriga G, Mor S, Ng TFF, García V, Del Río J, Rodrigues P, Briceño C, Medina RA, González-Acuña D
Title	Novel Avulaviruses in Penguins, Antarctica.
Journal	Emerg Infect Dis. 2017 Jul;23(7):1212-1214.
Comment	Culture cell line: MDBK cells, Vero cells
DBLINKS	KEGG BRITE: NC_039017 ICTV: 202305577 ViralZone: family, genus

Scientific Name	Antarctic penguin virus B [TAX:2006073]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Orthoavulavirus; Orthoavulavirus kopaiticense; Avian orthoavulavirus 18
RefSeq	NC_039018 Antarctic penguin virus B, complete genome.
Evidence	Literature
Reference	PMID: 28628443
Authors	Neira V, Tapia R, Verdugo C, Barriga G, Mor S, Ng TFF, García V, Del Río J, Rodrigues P, Briceño C, Medina RA, González-Acuña D
Title	Novel Avulaviruses in Penguins, Antarctica.
Journal	Emerg Infect Dis. 2017 Jul;23(7):1212-1214.
Comment	Culture cell line: MDBK cells, Vero cells
DBLINKS	KEGG BRITE: NC_039018 ICTV: 202305578 ViralZone: family, genus

Scientific Name	Antarctic penguin virus C [TAX:2006074]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Orthoavulavirus; Orthoavulavirus oneillense; Avian orthoavulavirus 19
RefSeq	NC_039019 Antarctic penguin virus C, complete genome.
Evidence	Literature
Reference	PMID: 28628443
Authors	Neira V, Tapia R, Verdugo C, Barriga G, Mor S, Ng TFF, García V, Del Río J, Rodrigues P, Briceño C, Medina RA, González-Acuña D
Title	Novel Avulaviruses in Penguins, Antarctica.
Journal	Emerg Infect Dis. 2017 Jul;23(7):1212-1214.
Comment	Culture cell line: MDBK cells, Vero cells
DBLINKS	KEGG BRITE: NC_039019 ICTV: 202305579 ViralZone: family, genus

Scientific Name	avian paramyxovirus 13 [TAX:2560321]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Orthoavulavirus; Orthoavulavirus japanense
RefSeq	NC_030231 Avian paramyxovirus goose/Shimane/67/2000 viral cRNA, complete genome.
Evidence	Literature
Reference	PMID: 25866408
Authors	Yamamoto E, Ito H, Tomioka Y, Ito T
Title	Characterization of novel avian paramyxovirus strain APMV/Shimane67 isolated from migratory wild geese in Japan.
Journal	J Vet Med Sci. 2015 Sep;77(9):1079-85.
Comment	Culture cell line: DF-1, MDCK, MDBK, BHK, Vero, 293 cells
DBLINKS	KEGG BRITE: NC_030231 ICTV: 202301603 ViralZone: family, genus

Scientific Name	avian paramyxovirus 2 [TAX:2560313]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Metaavulavirus; Metaavulavirus procarduelis; Metaavulavirus yucaipaense
RefSeq	NC_039230 Avian paramyxovirus 2 strain APMV-2/Chicken/California/Yucaipa/56, complete genome.
Evidence	Literature
Reference	PMID: 18603323
Authors	Subbiah M, Xiao S, Collins PL, Samal SK
Title	Complete sequence of the genome of avian paramyxovirus type 2 (strain Yucaipa) and comparison with other paramyxoviruses.
Journal	Virus Res. 2008 Oct;137(1):40-8.
Comment	Culture cell line: BHK21, BT, DF-1, HEp2, MDCK, PK15, QT35, RK13, Vero cells
DBLINKS	KEGG BRITE: NC_039230 ICTV: 202301592 ViralZone: family, genus

Scientific Name	Berrimah virus [TAX:318834]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Ephemerovirus; Ephemerovirus berrimah
RefSeq	NC_025358 Berrimah virus strain DPP 63, complete genome.
Evidence	Literature
Reference	PMID: 1629617
Authors	Zakrzewski H, Cybinski DH, Walker PJ
Title	A blocking ELISA for the detection of specific antibodies to bovine ephemeral fever virus.
Journal	J Immunol Methods. 1992 Jul 6;151(1-2):289-97.
DBLINKS	KEGG BRITE: NC_025358 ICTV: 202301683 ViralZone: genus, family

Scientific Name	Bluetongue virus [TAX:40051]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus; Orbivirus caerulinguae
RefSeq	NC_006007 Bluetongue virus segment 8, complete sequence. NC_006008 Bluetongue virus gene for VP6 protein, complete cds. NC_006010 Bluetongue virus segment 6, complete sequence. NC_006013 Bluetongue virus VP2 gene, complete cds. NC_006014 Bluetongue virus segment 3, complete sequence. NC_006015 Bluetongue virus segment 10, complete sequence. NC_006022 Bluetongue virus segment 7, complete sequence. NC_006023 Bluetongue virus segment 1, complete sequence. NC_006024 Bluetongue virus segment 4, complete sequence. NC_006025 Bluetongue virus segment 5, complete sequence.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 25215598
Authors	Mayo CE, Mullens BA, Reisen WK, Osborne CJ, Gibbs EP, Gardner IA, MacLachlan NJ
Title	Seasonal and interseasonal dynamics of bluetongue virus infection of dairy cattle and Culicoides sonorensis midges in northern California--implications for virus overwintering in temperate zones.
Journal	PLoS One. 2014;9(9):e106975.
DBLINKS	KEGG BRITE: NC_006007 NC_006008 NC_006010 NC_006013 NC_006014 NC_006015 NC_006022 NC_006023 NC_006024 NC_006025 ICTV: 202304879 ViralZone: family, genus

Scientific Name	Border disease virus [TAX:358764]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pestivirus; Pestivirus ovis
RefSeq	NC_003679 Border disease virus X818, complete genome.
Evidence	Literature
Reference	PMID: 25889936
Authors	Braun U, Hilbe M, Janett F, Hässig M, Zanoni R, Frei S, Schweizer M
Title	Transmission of border disease virus from a persistently infected calf to seronegative heifers in early pregnancy.
Journal	BMC Vet Res. 2015 Feb 22;11:43.
DBLINKS	KEGG BRITE: NC_003679 ICTV: 202303152 ViralZone: genus

Scientific Name	Bos taurus papillomavirus 1 [TAX:3085316]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Deltapapillomavirus; Deltapapillomavirus 4
RefSeq	NC_001522 Bovine papillomavirus - 1, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 3036488
Authors	Baker CC, Howley PM
Title	Differential promoter utilization by the bovine papillomavirus in transformed cells and productively infected wart tissues.
Journal	EMBO J. 1987 Apr;6(4):1027-35.
DBLINKS	KEGG BRITE: NC_001522 ICTV: 202304003 ViralZone: family, genus

Scientific Name	Bos taurus papillomavirus 10 [TAX:453461]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Xipapillomavirus; Xipapillomavirus 1
GenBank	AB331651 Bovine papillomavirus-10 DNA, complete genome.
Evidence	Literature
Reference	PMID: 18089739
Authors	Hatama S, Nobumoto K, Kanno T
Title	Genomic and phylogenetic analysis of two novel bovine papillomaviruses, BPV-9 and BPV-10.
Journal	J Gen Virol. 2008 Jan;89(Pt 1):158-163.
DBLINKS	ICTV: 202304133 ViralZone: genus, family

Scientific Name	Bos taurus papillomavirus 11 [TAX:714200]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Xipapillomavirus; Xipapillomavirus 1
GenBank	AB543507 Bovine papillomavirus type 11 DNA, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 21424729
Authors	Hatama S, Ishihara R, Ueda Y, Kanno T, Uchida I
Title	Detection of a novel bovine papillomavirus type 11 (BPV-11) using xipapillomavirus consensus polymerase chain reaction primers.
Journal	Arch Virol. 2011 Jul;156(7):1281-5.
DBLINKS	ICTV: 202304133 ViralZone: genus, family

Scientific Name	Bos taurus papillomavirus 12 [TAX:1070324]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Xipapillomavirus; Xipapillomavirus 2
RefSeq	NC_028126 Bovine papillomavirus type 12 isolate PR000001, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 22033594
Authors	Zhu W, Dong J, Shimizu E, Hatama S, Kadota K, Goto Y, Haga T
Title	Characterization of novel bovine papillomavirus type 12 (BPV-12) causing epithelial papilloma.
Journal	Arch Virol. 2012 Jan;157(1):85-91.
DBLINKS	KEGG BRITE: NC_028126 ICTV: 202304134 ViralZone: genus, family

Scientific Name	Bos taurus papillomavirus 13 [TAX:1887213]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Deltapapillomavirus; Deltapapillomavirus 4
RefSeq	NC_030795 Bos taurus papillomavirus 13 strain 14RO12, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_030795 ViralZone: family, genus

Scientific Name	Bos taurus papillomavirus 15 [TAX:1969700]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Xipapillomavirus; Xipapillomavirus 1
GenBank	KM983393 Bos taurus papillomavirus 15 strain Aks-02, complete genome.
Evidence	GenBank
DBLINKS	ICTV: 202304133 ViralZone: genus, family

Scientific Name	Bos taurus papillomavirus 16 [TAX:1887214]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyokappapapillomavirus; Dyokappapapillomavirus 3
RefSeq	NC_030796 Bos taurus papillomavirus 16, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_030796 ICTV: 202305865 ViralZone: genus, family

Scientific Name	Bos taurus papillomavirus 17 [TAX:1887215]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Xipapillomavirus; Xipapillomavirus 4
RefSeq	NC_030797 Bos taurus papillomavirus 17, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_030797 ICTV: 202305881 ViralZone: genus, family

Scientific Name	Bos taurus papillomavirus 18 [TAX:1887216]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyokappapapillomavirus; Dyokappapapillomavirus 4
RefSeq	NC_030798 Bos taurus papillomavirus 18, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_030798 ICTV: 202305866 ViralZone: genus, family

Scientific Name	Bos taurus papillomavirus 19 [TAX:1887217]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyoxipapillomavirus; Dyoxipapillomavirus 2
RefSeq	NC_030799 Bos taurus papillomavirus 19, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_030799 ICTV: 202305868 ViralZone: family, genus

Scientific Name	Bos taurus papillomavirus 2 [TAX:2758382]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Deltapapillomavirus; Deltapapillomavirus 4
GenBank	M20219 Bovine papillomavirus type 2, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 1333885
Authors	Campo MS, Jarrett WF, Barron R, O'Neil BW, Smith KT
Title	Association of bovine papillomavirus type 2 and bracken fern with bladder cancer in cattle.
Journal	Cancer Res. 1992 Dec 15;52(24):6898-904.
DBLINKS	ICTV: 202304003 ViralZone: family, genus

Scientific Name	Bos taurus papillomavirus 20 [TAX:1887218]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; unclassified Papillomaviridae; non-primate mammal papillomaviruses
RefSeq	NC_030800 Bos taurus papillomavirus 20, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_030800 ViralZone: family

Scientific Name	Bos taurus papillomavirus 21 [TAX:1887219]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyoxipapillomavirus; Dyoxipapillomavirus 2
RefSeq	NC_030801 Bos taurus papillomavirus 21, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_030801 ICTV: 202305868 ViralZone: family, genus

Scientific Name	Bos taurus papillomavirus 4 [TAX:10562]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Xipapillomavirus; Xipapillomavirus 1
GenBank	X05817 Bovine papillomavirus type 4 (BPV-4) genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 1849970
Authors	Jackson ME, Campo MS
Title	Positive and negative E2-independent regulatory elements in the long control region of bovine papillomavirus type 4.
Journal	J Gen Virol. 1991 Apr;72 ( Pt 4):877-83.
DBLINKS	ICTV: 202304133 ViralZone: genus, family

Scientific Name	Bos taurus papillomavirus 6 [TAX:10563]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Xipapillomavirus; Xipapillomavirus 1
GenBank	AJ620208 Bovine papillomavirus type 6 complete genome.
Evidence	GenBank
Evidence	UniProt
Evidence	Literature
Reference	PMID: 21424729
Authors	Hatama S, Ishihara R, Ueda Y, Kanno T, Uchida I
Title	Detection of a novel bovine papillomavirus type 11 (BPV-11) using xipapillomavirus consensus polymerase chain reaction primers.
Journal	Arch Virol. 2011 Jul;156(7):1281-5.
DBLINKS	ICTV: 202304133 ViralZone: genus, family

Scientific Name	Bos taurus papillomavirus 7 [TAX:1001533]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyoxipapillomavirus; Dyoxipapillomavirus 1
RefSeq	NC_007612 Bovine papillomavirus 7, complete genome.
Evidence	Literature
Reference	PMID: 17554025
Authors	Ogawa T, Tomita Y, Okada M, Shirasawa H
Title	Complete genome and phylogenetic position of bovine papillomavirus type 7.
Journal	J Gen Virol. 2007 Jul;88(Pt 7):1934-8.
Comment	cattle
DBLINKS	KEGG BRITE: NC_007612 ICTV: 202304047 ViralZone: family, genus

Scientific Name	Bos taurus papillomavirus 9 [TAX:453460]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Xipapillomavirus; Xipapillomavirus 1
GenBank	AB331650 Bovine papillomavirus-9 DNA, complete genome.
Evidence	Literature
Reference	PMID: 18089739
Authors	Hatama S, Nobumoto K, Kanno T
Title	Genomic and phylogenetic analysis of two novel bovine papillomaviruses, BPV-9 and BPV-10.
Journal	J Gen Virol. 2008 Jan;89(Pt 1):158-163.
DBLINKS	ICTV: 202304133 ViralZone: genus, family

Scientific Name	Bosavirus MS-2016a [TAX:1917013]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Copiparvovirus; Copiparvovirus ungulate5
RefSeq	NC_031959 Bosavirus MS-2016a, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 28100412
Authors	Sadeghi M, Kapusinszky B, Yugo DM, Phan TG, Deng X, Kanevsky I, Opriessnig T, Woolums AR, Hurley DJ, Meng XJ, Delwart E
Title	Virome of US bovine calf serum.
Journal	Biologicals. 2017 Mar;46:64-67.
Comment	Culture cell line: fetal bovine serum
DBLINKS	KEGG BRITE: NC_031959 ICTV: 202307342 ViralZone: family, genus

Scientific Name	Bovine adeno-associated virus [TAX:256548]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Dependoparvovirus; Dependoparvovirus mammalian1
RefSeq	NC_005889 Bovine adeno-associated virus, complete genome.
Evidence	Literature
Reference	PMID: 15163744
Authors	Schmidt M, Katano H, Bossis I, Chiorini JA
Title	Cloning and characterization of a bovine adeno-associated virus.
Journal	J Virol. 2004 Jun;78(12):6509-16.
Comment	Culture cell line: 293T cells, HeLa cells, SkOV3 cells, SNB75 cells, MDBK cells Laboratory host: Mus musculus
DBLINKS	KEGG BRITE: NC_005889 ViralZone: genus, family

Scientific Name	Bovine adenovirus 1 [TAX:10546]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus bosprimum; Bovine mastadenovirus A
RefSeq	NC_044934 Recombinant adenovirus and mutant adenovirus induced from bovine adenovirus type 1.
Evidence	Literature
Reference	PMID: 9581789
Authors	Evans PS, Benkö M, Harrach B, Letchworth GJ
Title	Sequence, transcriptional analysis, and deletion of the bovine adenovirus type 1 E3 region.
Journal	Virology. 1998 Apr 25;244(1):173-85.
Comment	Culture cell line: MDBK cells
DBLINKS	KEGG BRITE: NC_044934 ICTV: 202302415 ViralZone: genus, family

Scientific Name	Bovine adenovirus 2 [TAX:114429]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus bovidae; Ovine mastadenovirus A
RefSeq	NC_002513 Bovine adenovirus type 2, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_002513 ICTV: 202302432 ViralZone: genus, family

Scientific Name	Bovine adenovirus 3 [TAX:10510]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus bostertium; Bovine mastadenovirus B
RefSeq	NC_001876 Bovine adenovirus 3 complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001876 ICTV: 202302416 ViralZone: genus, family

Scientific Name	Bovine adenovirus 4 [TAX:70333]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Barthadenovirus; Barthadenovirus bosquartum; Bovine atadenovirus D
GenBank	AF036092 Bovine adenovirus 4 strain THT/62, complete genome.
Evidence	GenBank
Evidence	UniProt
DBLINKS	ViralZone: genus, family

Scientific Name	Bovine adenovirus 6 [TAX:111167]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Barthadenovirus; Barthadenovirus bossextum; Bovine atadenovirus E
RefSeq	NC_020074 Bovine adenovirus 6 strain 671130, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_020074 ICTV: 202309160 ViralZone: genus, family

Scientific Name	Bovine alphaherpesvirus 2 [TAX:10295]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Alphaherpesvirinae; Simplexvirus; Simplexvirus bovinealpha2
RefSeq	NC_076512 Bovine alphaherpesvirus 2 strain C1Z FZR, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_076512 ICTV: 202301426 ViralZone: family, genus

Scientific Name	Bovine alphaherpesvirus 5 [TAX:35244]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Alphaherpesvirinae; Varicellovirus; Varicellovirus bovinealpha5
RefSeq	NC_005261 Bovine herpesvirus 5 strain SV507/99, complete genome.
DBLINKS	KEGG BRITE: NC_005261 ICTV: 202301441 ViralZone: family, genus

Scientific Name	Bovine associated gemykibivirus 1 [TAX:2004486]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemykibivirus; Gemykibivirus bovas1
RefSeq	NC_024689 HCBI8.215 virus complete sequence.
Evidence	Literature
Reference	PMID: 25169858
Authors	Lamberto I, Gunst K, Müller H, Zur Hausen H, de Villiers EM
Title	Mycovirus-like DNA virus sequences from cattle serum and human brain and serum samples from multiple sclerosis patients.
Journal	Genome Announc. 2014 Aug 28;2(4).
DBLINKS	KEGG BRITE: NC_024689 ICTV: 202303608 ViralZone: family, genus

Scientific Name	Bovine astrovirus [TAX:1435485]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; Mamastrovirus; unclassified Mamastrovirus
RefSeq	NC_024297 Bovine astrovirus strain BAstV-GX7/CHN/2014, complete genome.
DBLINKS	KEGG BRITE: NC_024297 ViralZone: family, genus

Scientific Name	Bovine astrovirus B170/HK [TAX:1027244]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; Mamastrovirus; unclassified Mamastrovirus
RefSeq	NC_023632 Bovine astrovirus B170/HK, complete genome.
DBLINKS	KEGG BRITE: NC_023632 ViralZone: family, genus

Scientific Name	Bovine astrovirus B18/HK [TAX:1027245]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; Mamastrovirus; unclassified Mamastrovirus
RefSeq	NC_023631 Bovine astrovirus B18/HK, complete genome.
DBLINKS	KEGG BRITE: NC_023631 ViralZone: family, genus

Scientific Name	Bovine astrovirus B76-2/HK [TAX:1027247]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; Mamastrovirus; unclassified Mamastrovirus
RefSeq	NC_023630 Bovine astrovirus B76-2/HK, complete genome.
DBLINKS	KEGG BRITE: NC_023630 ViralZone: family, genus

Scientific Name	Bovine astrovirus B76/HK [TAX:1027248]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; Mamastrovirus; unclassified Mamastrovirus
RefSeq	NC_023629 Bovine astrovirus B76/HK, complete genome.
DBLINKS	KEGG BRITE: NC_023629 ViralZone: family, genus

Scientific Name	Bovine astrovirus CH13 [TAX:1522059]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; unclassified Astroviridae
RefSeq	NC_024498 Bovine astrovirus CH13, complete genome.
DBLINKS	KEGG BRITE: NC_024498 ViralZone: family

Scientific Name	Bovine atadenovirus D [TAX:130499]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Barthadenovirus; Barthadenovirus bosquartum
RefSeq	NC_002685 Bovine adenovirus D, complete genome.
Evidence	RefSeq
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_002685 ICTV: 202302390 ViralZone: genus, family

Scientific Name	bovine bocaparvovirus 2 [TAX:1864484]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Bocaparvovirus; Bocaparvovirus ungulate6
RefSeq	NC_030402 Ungulate bocaparvovirus 6 strain Ungulate bocaparvovirus 6 strain USII/03, complete genome.
Evidence	Literature
Reference	PMID: 27154756
Authors	Mitra N, Cernicchiaro N, Torres S, Li F, Hause BM
Title	Metagenomic characterization of the virome associated with bovine respiratory disease in feedlot cattle identified novel viruses and suggests an etiologic role for influenza D virus.
Journal	J Gen Virol. 2016 Aug;97(8):1771-1784.
DBLINKS	KEGG BRITE: NC_030402 ICTV: 202305897 ViralZone: family, genus

Scientific Name	Bovine calicivirus strain Kirklareli [TAX:1812179]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Nebovirus; unclassified Nebovirus
RefSeq	NC_030793 Bovine calicivirus strain Kirklareli, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 26292294
Authors	Alkan F, Karayel İ, Catella C, Bodnar L, Lanave G, Bányai K, Di Martino B, Decaro N, Buonavoglia C, Martella V
Title	Identification of a Bovine Enteric Calicivirus, Kırklareli Virus, Distantly Related to Neboviruses, in Calves with Enteritis in Turkey.
Journal	J Clin Microbiol. 2015 Nov;53(11):3614-7.
DBLINKS	KEGG BRITE: NC_030793 ViralZone: genus, family

Scientific Name	Bovine circovirus [TAX:85542]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine2; Porcine circovirus 2
GenBank	AF109397 Bovine circovirus, complete genome.
Evidence	Literature
Reference	PMID: 10200889
Authors	Nayar GP, Hamel AL, Lin L, Sachvie C, Grudeski E, Spearman G
Title	Evidence for circovirus in cattle with respiratory disease and from aborted bovine fetuses.
Journal	Can Vet J. 1999 Apr;40(4):277-8.
DBLINKS	ViralZone: genus, family

Scientific Name	Bovine coronavirus [TAX:11128]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Betacoronavirus gravedinis; Betacoronavirus 1
RefSeq	NC_003045 Bovine coronavirus isolate BCoV-ENT, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_003045 ViralZone: family, genus

Scientific Name	Bovine coronavirus E-AH187 [TAX:422220]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Betacoronavirus gravedinis; Betacoronavirus 1; Bovine coronavirus
GenBank	EF424619 Bovine coronavirus E-AH187, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Bovine coronavirus E-AH187-TC [TAX:454963]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Betacoronavirus gravedinis; Betacoronavirus 1; Bovine coronavirus; Bovine coronavirus E-AH187
GenBank	FJ938064 Bovine coronavirus E-AH187-TC, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Bovine coronavirus E-AH65 [TAX:422217]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Betacoronavirus gravedinis; Betacoronavirus 1; Bovine coronavirus
GenBank	EF424615 Bovine coronavirus E-AH65, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Bovine coronavirus E-AH65-TC [TAX:422218]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Betacoronavirus gravedinis; Betacoronavirus 1; Bovine coronavirus; Bovine coronavirus E-AH65
GenBank	EF424616 Bovine coronavirus E-AH65-TC, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Bovine coronavirus E-DB2-TC [TAX:422216]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Betacoronavirus gravedinis; Betacoronavirus 1; Bovine coronavirus
GenBank	FJ938063 Bovine coronavirus E-DB2-TC, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Bovine coronavirus R-AH187 [TAX:422219]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Betacoronavirus gravedinis; Betacoronavirus 1; Bovine coronavirus
GenBank	EF424620 Bovine coronavirus R-AH187, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 17434558
Authors	Zhang X, Hasoksuz M, Spiro D, Halpin R, Wang S, Vlasova A, Janies D, Jones LR, Ghedin E, Saif LJ
Title	Quasispecies of bovine enteric and respiratory coronaviruses based on complete genome sequences and genetic changes after tissue culture adaptation.
Journal	Virology. 2007 Jun 20;363(1):1-10.
DBLINKS	ViralZone: family, genus

Scientific Name	Bovine coronavirus R-AH65 [TAX:422214]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Betacoronavirus gravedinis; Betacoronavirus 1; Bovine coronavirus
GenBank	EF424617 Bovine coronavirus R-AH65, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 17434558
Authors	Zhang X, Hasoksuz M, Spiro D, Halpin R, Wang S, Vlasova A, Janies D, Jones LR, Ghedin E, Saif LJ
Title	Quasispecies of bovine enteric and respiratory coronaviruses based on complete genome sequences and genetic changes after tissue culture adaptation.
Journal	Virology. 2007 Jun 20;363(1):1-10.
DBLINKS	ViralZone: family, genus

Scientific Name	Bovine coronavirus R-AH65-TC [TAX:422215]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Betacoronavirus gravedinis; Betacoronavirus 1; Bovine coronavirus; Bovine coronavirus R-AH65
GenBank	EF424618 Bovine coronavirus R-AH65-TC, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Bovine cyclovirus [TAX:1455632]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; Cyclovirus gaaye
GenBank	HQ738634 Bovine cyclovirus isolate PKbeef23, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Bovine enterovirus strain K2577 [TAX:106607]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus eibovi; Enterovirus E
GenBank	AF123432 Bovine enterovirus isolate K2577, complete genome.
Evidence	Literature
Reference	PMID: 10501163
Authors	McCarthy FM, Smith GA, Mattick JS
Title	Molecular characterisation of Australian bovine enteroviruses.
Journal	Vet Microbiol. 1999 Aug 16;68(1-2):71-81.
Comment	Culture cell line: MDBK cells
DBLINKS	ViralZone: genus, family

Scientific Name	Bovine enterovirus strain SL305 [TAX:106608]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus eibovi; Enterovirus E
GenBank	AF123433 Bovine enterovirus isolate SL305, complete genome.
Evidence	Literature
Reference	PMID: 10501163
Authors	McCarthy FM, Smith GA, Mattick JS
Title	Molecular characterisation of Australian bovine enteroviruses.
Journal	Vet Microbiol. 1999 Aug 16;68(1-2):71-81.
Comment	Culture cell line: MDBK cells
DBLINKS	ViralZone: genus, family

Scientific Name	Bovine enterovirus type 2 [TAX:269638]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus fitauri; Enterovirus F
GenBank	AY508697 Bovine enterovirus type 2 strain 3A, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 15483232
Authors	Goens SD, Botero S, Zemla A, Zhou CE, Perdue ML
Title	Bovine enterovirus 2: complete genomic sequence and molecular modelling of a reference strain and a wild-type isolate from endemically infected US cattle.
Journal	J Gen Virol. 2004 Nov;85(Pt 11):3195-3203.
Comment	Culture cell line: MDBK cells
DBLINKS	ViralZone: genus, family

Scientific Name	Bovine ephemeral fever virus [TAX:11303]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Ephemerovirus; Ephemerovirus febris
RefSeq	NC_002526 Bovine ephemeral fever virus, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 8046391
Authors	Walker PJ, Wang Y, Cowley JA, McWilliam SM, Prehaud CJ
Title	Structural and antigenic analysis of the nucleoprotein of bovine ephemeral fever rhabdovirus.
Journal	J Gen Virol. 1994 Aug;75 ( Pt 8):1889-99.
Evidence	Literature
Reference	PMID: 11074128
Authors	Dhillon J, Cowley JA, Wang Y, Walker PJ
Title	RNA polymerase (L) gene and genome terminal sequences of ephemeroviruses bovine ephemeral fever virus and Adelaide River virus indicate a close relationship to vesiculoviruses.
Journal	Virus Res. 2000 Sep;70(1-2):87-95.
DBLINKS	KEGG BRITE: NC_002526 ICTV: 202301684 ViralZone: genus, family

Scientific Name	Bovine faeces associated circular DNA virus 1 [TAX:1843764]
Lineage	Viruses; unclassified viruses
RefSeq	NC_030130 Bovine faeces associated circular DNA virus 1 isolate GP3-46075_cow2, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27211884
Authors	Steel O, Kraberger S, Sikorski A, Young LM, Catchpole RJ, Stevens AJ, Ladley JJ, Coray DS, Stainton D, Dayaram A, Julian L, van Bysterveldt K, Varsani A
Title	Circular replication-associated protein encoding DNA viruses identified in the faecal matter of various animals in New Zealand.
Journal	Infect Genet Evol. 2016 Sep;43:151-64.
DBLINKS	KEGG BRITE: NC_030130 ICTV: 202318406

Scientific Name	Bovine faeces associated circular DNA virus 2 [TAX:1843765]
Lineage	Viruses; unclassified viruses
RefSeq	NC_030137 Bovine faeces associated circular DNA virus 2 isolate 48_Fec10_cow, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27211884
Authors	Steel O, Kraberger S, Sikorski A, Young LM, Catchpole RJ, Stevens AJ, Ladley JJ, Coray DS, Stainton D, Dayaram A, Julian L, van Bysterveldt K, Varsani A
Title	Circular replication-associated protein encoding DNA viruses identified in the faecal matter of various animals in New Zealand.
Journal	Infect Genet Evol. 2016 Sep;43:151-64.
DBLINKS	KEGG BRITE: NC_030137

Scientific Name	Bovine faeces associated smacovirus 1 [TAX:1843749]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Bonzesmacovirus; Bonzesmacovirus bovas1
RefSeq	NC_030124 Bovine faeces associated smacovirus 1 isolate 48_Fec59973_cow, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27211884
Authors	Steel O, Kraberger S, Sikorski A, Young LM, Catchpole RJ, Stevens AJ, Ladley JJ, Coray DS, Stainton D, Dayaram A, Julian L, van Bysterveldt K, Varsani A
Title	Circular replication-associated protein encoding DNA viruses identified in the faecal matter of various animals in New Zealand.
Journal	Infect Genet Evol. 2016 Sep;43:151-64.
DBLINKS	KEGG BRITE: NC_030124 ICTV: 202305957 ViralZone: family

Scientific Name	Bovine faeces associated smacovirus 2 [TAX:1843750]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; Porprismacovirus bovas1
RefSeq	NC_030119 Bovine faeces associated smacovirus 2 isolate 23_Fec30587_cow, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27211884
Authors	Steel O, Kraberger S, Sikorski A, Young LM, Catchpole RJ, Stevens AJ, Ladley JJ, Coray DS, Stainton D, Dayaram A, Julian L, van Bysterveldt K, Varsani A
Title	Circular replication-associated protein encoding DNA viruses identified in the faecal matter of various animals in New Zealand.
Journal	Infect Genet Evol. 2016 Sep;43:151-64.
DBLINKS	KEGG BRITE: NC_030119 ICTV: 202305965 ViralZone: family

Scientific Name	Bovine faeces associated smacovirus 3 [TAX:1843751]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Bovismacovirus; Bovismacovirus bovas2
RefSeq	NC_030123 Bovine faeces associated smacovirus 3 isolate 48_Fec5_cow, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27211884
Authors	Steel O, Kraberger S, Sikorski A, Young LM, Catchpole RJ, Stevens AJ, Ladley JJ, Coray DS, Stainton D, Dayaram A, Julian L, van Bysterveldt K, Varsani A
Title	Circular replication-associated protein encoding DNA viruses identified in the faecal matter of various animals in New Zealand.
Journal	Infect Genet Evol. 2016 Sep;43:151-64.
DBLINKS	KEGG BRITE: NC_030123 ICTV: 202305946 ViralZone: family

Scientific Name	Bovine faeces associated smacovirus 4 [TAX:1843752]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Cosmacovirus; Cosmacovirus bovas1
RefSeq	NC_030128 Bovine faeces associated smacovirus 4 isolate GP3_45917_cow, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27211884
Authors	Steel O, Kraberger S, Sikorski A, Young LM, Catchpole RJ, Stevens AJ, Ladley JJ, Coray DS, Stainton D, Dayaram A, Julian L, van Bysterveldt K, Varsani A
Title	Circular replication-associated protein encoding DNA viruses identified in the faecal matter of various animals in New Zealand.
Journal	Infect Genet Evol. 2016 Sep;43:151-64.
DBLINKS	KEGG BRITE: NC_030128 ICTV: 202305949 ViralZone: family

Scientific Name	Bovine faeces associated smacovirus 5 [TAX:1843753]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Drosmacovirus; Drosmacovirus bovas1
RefSeq	NC_030125 Bovine faeces associated smacovirus 5 isolate 48_Fec9_cow, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27211884
Authors	Steel O, Kraberger S, Sikorski A, Young LM, Catchpole RJ, Stevens AJ, Ladley JJ, Coray DS, Stainton D, Dayaram A, Julian L, van Bysterveldt K, Varsani A
Title	Circular replication-associated protein encoding DNA viruses identified in the faecal matter of various animals in New Zealand.
Journal	Infect Genet Evol. 2016 Sep;43:151-64.
DBLINKS	KEGG BRITE: NC_030125 ICTV: 202305953 ViralZone: family

Scientific Name	Bovine faeces associated smacovirus 6 [TAX:1843754]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Bostasmacovirus; Bostasmacovirus bovas1
RefSeq	NC_030129 Bovine faeces associated smacovirus 6 isolate GP3_46075_cow, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27211884
Authors	Steel O, Kraberger S, Sikorski A, Young LM, Catchpole RJ, Stevens AJ, Ladley JJ, Coray DS, Stainton D, Dayaram A, Julian L, van Bysterveldt K, Varsani A
Title	Circular replication-associated protein encoding DNA viruses identified in the faecal matter of various animals in New Zealand.
Journal	Infect Genet Evol. 2016 Sep;43:151-64.
DBLINKS	KEGG BRITE: NC_030129 ICTV: 202305958 ViralZone: family

Scientific Name	Bovine foamy virus [TAX:207343]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Spumaretrovirinae; Bovispumavirus; Bovispumavirus bostau
RefSeq	NC_001831 Bovine foamy virus, complete genome.
Evidence	Literature
Reference	PMID: 8289332
Authors	Renshaw RW, Casey JW
Title	Transcriptional mapping of the 3' end of the bovine syncytial virus genome.
Journal	J Virol. 1994 Feb;68(2):1021-8.
Comment	cattle
DBLINKS	KEGG BRITE: NC_001831 ICTV: 202305039 ViralZone: genus, family

Scientific Name	Bovine gammaherpesvirus 4 [TAX:10385]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Gammaherpesvirinae; Rhadinovirus; Rhadinovirus bovinegamma4
RefSeq	NC_002665 Bovine herpesvirus 4 long unique region, complete sequence.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_002665 ICTV: 202301508 ViralZone: family, genus

Scientific Name	Bovine gammaherpesvirus 6 [TAX:1504288]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Gammaherpesvirinae; Macavirus; Macavirus bovinegamma6
RefSeq	NC_024303 Bovine herpesvirus 6 isolate Pennsylvania 47, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_024303 ICTV: 202301494 ViralZone: family, genus

Scientific Name	Bovine hepacivirus [TAX:1633878]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Hepacivirus; Hepacivirus bovis
RefSeq	NC_026797 Bovine hepacivirus polyprotein (POLY) gene, complete cds.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_026797 ViralZone: genus

Scientific Name	Bovine herpesvirus type 1.1 [TAX:79889]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Alphaherpesvirinae; Varicellovirus; Varicellovirus bovinealpha1; bovine alphaherpesvirus 1
RefSeq	NC_063268 Bovine herpesvirus type 1.1 isolate NVSL challenge 97-11, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 1313901
Authors	Wirth UV, Fraefel C, Vogt B, Vlcek C, Paces V, Schwyzer M
Title	Immediate-early RNA 2.9 and early RNA 2.6 of bovine herpesvirus 1 are 3' coterminal and encode a putative zinc finger transactivator protein.
Journal	J Virol. 1992 May;66(5):2763-72.
Comment	Culture cell line: MDBK cells
Evidence	Literature
Reference	PMID: 23254967
Authors	d'Offay JM, Fulton RW, Eberle R
Title	Complete genome sequence of the NVSL BoHV-1.1 Cooper reference strain.
Journal	Arch Virol. 2013 May;158(5):1109-13.
Comment	Culture cell line: MDBK cells
DBLINKS	KEGG BRITE: NC_063268 ICTV: 202301440 ViralZone: family, genus

Scientific Name	Bovine herpesvirus type 1.2 strain B589 [TAX:1548190]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Alphaherpesvirinae; Varicellovirus; Varicellovirus bovinealpha1; bovine alphaherpesvirus 1; Bovine herpesvirus type 1.2
GenBank	KM258881 Bovine herpesvirus type 1.2 strain B589, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 27568014
Authors	d'Offay JM, Eberle R, Fulton RW, Kirkland PD
Title	Complete genomic sequence and comparative analysis of four genital and respiratory isolates of bovine herpesvirus subtype 1.2b (BoHV-1.2b), including the prototype virus strain K22.
Journal	Arch Virol. 2016 Nov;161(11):3269-74.
DBLINKS	ViralZone: family, genus

Scientific Name	Bovine herpesvirus type 1.2 strain K22 [TAX:31519]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Alphaherpesvirinae; Varicellovirus; Varicellovirus bovinealpha1; bovine alphaherpesvirus 1; Bovine herpesvirus type 1.2
GenBank	KM258880 Bovine herpesvirus type 1.2 strain K22, complete genome.
Evidence	GenBank
Evidence	UniProt
Evidence	Literature
Reference	PMID: 1313901
Authors	Wirth UV, Fraefel C, Vogt B, Vlcek C, Paces V, Schwyzer M
Title	Immediate-early RNA 2.9 and early RNA 2.6 of bovine herpesvirus 1 are 3' coterminal and encode a putative zinc finger transactivator protein.
Journal	J Virol. 1992 May;66(5):2763-72.
Comment	Culture cell line: Madin-Darby bovine kidney (MDBK) cells
DBLINKS	ViralZone: family, genus

Scientific Name	Bovine herpesvirus type 1.2 strain SM023 [TAX:1548191]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Alphaherpesvirinae; Varicellovirus; Varicellovirus bovinealpha1; bovine alphaherpesvirus 1; Bovine herpesvirus type 1.2
GenBank	KM258882 Bovine herpesvirus type 1.2 strain SM023, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 27568014
Authors	d'Offay JM, Eberle R, Fulton RW, Kirkland PD
Title	Complete genomic sequence and comparative analysis of four genital and respiratory isolates of bovine herpesvirus subtype 1.2b (BoHV-1.2b), including the prototype virus strain K22.
Journal	Arch Virol. 2016 Nov;161(11):3269-74.
DBLINKS	ViralZone: family, genus

Scientific Name	Bovine herpesvirus type 1.2 strain SP1777 [TAX:1548192]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Alphaherpesvirinae; Varicellovirus; Varicellovirus bovinealpha1; bovine alphaherpesvirus 1; Bovine herpesvirus type 1.2
GenBank	KM258883 Bovine herpesvirus type 1.2 strain SP1777, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 27568014
Authors	d'Offay JM, Eberle R, Fulton RW, Kirkland PD
Title	Complete genomic sequence and comparative analysis of four genital and respiratory isolates of bovine herpesvirus subtype 1.2b (BoHV-1.2b), including the prototype virus strain K22.
Journal	Arch Virol. 2016 Nov;161(11):3269-74.
DBLINKS	ViralZone: family, genus

Scientific Name	Bovine immunodeficiency virus [TAX:11657]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus; Lentivirus bovimdef
RefSeq	NC_001413 Bovine immunodeficiency-like virus, complete proviral genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001413 ICTV: 202305026 ViralZone: genus, family

Scientific Name	Bovine leukemia virus [TAX:11901]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Deltaretrovirus; Deltaretrovirus bovleu
RefSeq	NC_001414 Bovine leukemia virus, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 25474884
Authors	Ruzina MN, Andrianov BV, Suprovich TM, Sulimova GE
Title	[Specific genetic features of the Russian forms of bovine leukemia virus].
Journal	Genetika. 2013 Aug;49(8):975-80.
Evidence	Literature
Reference	PMID: 32824449
Authors	Suzuki A, Chapman R, Douglass N, Carulei O, van Rensburg J, Williamson AL
Title	Phylogenetic Analysis of South African Bovine Leukaemia Virus (BLV) Isolates.
Journal	Viruses. 2020 Aug 17;12(8).
DBLINKS	KEGG BRITE: NC_001414 ICTV: 202304998 ViralZone: no rank, genus, family

Scientific Name	Bovine mastadenovirus A [TAX:129953]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus bosprimum
RefSeq	AC_000191 Bovine adenovirus A, complete genome.
Evidence	Literature
Reference	PMID: 9581789
Authors	Evans PS, Benkö M, Harrach B, Letchworth GJ
Title	Sequence, transcriptional analysis, and deletion of the bovine adenovirus type 1 E3 region.
Journal	Virology. 1998 Apr 25;244(1):173-85.
DBLINKS	KEGG BRITE: AC_000191 ViralZone: genus, family

Scientific Name	Bovine mastadenovirus B [TAX:129950]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus bostertium
RefSeq	AC_000002 Bovine adenovirus B, complete genome.
Evidence	Literature
Reference	PMID: 9918888
Authors	Reddy PS, Chen Y, Idamakanti N, Pyne C, Babiuk LA, Tikoo SK
Title	Characterization of early region 1 and pIX of bovine adenovirus-3.
Journal	Virology. 1999 Jan 20;253(2):299-308.
Comment	Culture cell line: MDBK cells
DBLINKS	KEGG BRITE: AC_000002 ViralZone: genus, family

Scientific Name	Bovine nidovirus TCH5 [TAX:1631554]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Tornidovirineae; Tobaniviridae; Remotovirinae; Bostovirus; Bosnitovirus; Bostovirus bovis; Bovine nidovirus 1
RefSeq	NC_027199 Bovine nidovirus TCH5, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_027199 ICTV: 202301893 ViralZone: family

Scientific Name	Bovine papillomavirus [TAX:10571]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; unclassified Papillomaviridae; non-primate mammal papillomaviruses
RefSeq	NC_035208 Bovine papillomavirus isolate NY-8385, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_035208 ViralZone: family

Scientific Name	Bovine papillomavirus BAA5-Japan [TAX:508418]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Xipapillomavirus; Xipapillomavirus 1; Bos taurus papillomavirus 10
GenBank	EU360723 Bovine papillomavirus BAA5-Japan, complete genome.
DBLINKS	ViralZone: genus, family

Scientific Name	Bovine papular stomatitis virus [TAX:129727]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Parapoxvirus; Parapoxvirus bovinestomatitis
RefSeq	NC_005337 Bovine papular stomatitis virus, complete genome.
Evidence	Literature
Reference	PMID: 14671098
Authors	Delhon G, Tulman ER, Afonso CL, Lu Z, de la Concha-Bermejillo A, Lehmkuhl HD, Piccone ME, Kutish GF, Rock DL
Title	Genomes of the parapoxviruses ORF virus and bovine papular stomatitis virus.
Journal	J Virol. 2004 Jan;78(1):168-77.
DBLINKS	KEGG BRITE: NC_005337 ICTV: 202304779 ViralZone: family, genus

Scientific Name	Bovine parvovirus [TAX:10784]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Bocaparvovirus; Bocaparvovirus ungulate1
RefSeq	NC_001540 Bovine parvovirus, complete genome.
Evidence	RefSeq
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001540 ViralZone: family, genus

Scientific Name	Bovine parvovirus 1 [TAX:2839036]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Bocaparvovirus; Bocaparvovirus ungulate1
RefSeq	NC_038895 Bovine parvovirus-1 strain Abinanti, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 17715221
Authors	Qiu J, Cheng F, Johnson FB, Pintel D
Title	The transcription profile of the bocavirus bovine parvovirus is unlike those of previously characterized parvoviruses.
Journal	J Virol. 2007 Nov;81(21):12080-5.
DBLINKS	KEGG BRITE: NC_038895 ICTV: 202304249 ViralZone: family, genus

Scientific Name	bovine parvovirus 2 [TAX:172296]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Copiparvovirus; Copiparvovirus ungulate1
RefSeq	NC_006259 Bovine parvovirus 2, complete genome.
Evidence	Literature
Reference	PMID: 11562506
Authors	Allander T, Emerson SU, Engle RE, Purcell RH, Bukh J
Title	A virus discovery method incorporating DNase treatment and its application to the identification of two bovine parvovirus species.
Journal	Proc Natl Acad Sci U S A. 2001 Sep 25;98(20):11609-14.
Comment	bovine, cattle
DBLINKS	KEGG BRITE: NC_006259 ICTV: 202304255 ViralZone: family, genus

Scientific Name	Bovine parvovirus 3 [TAX:172297]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Erythroparvovirus; Erythroparvovirus ungulate1
RefSeq	NC_037053 Bovine parvovirus 3 isolate ujs1794 nonstructural protein and structural protein genes, complete cds. NC_074970 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds.
Evidence	Literature
Reference	PMID: 29334978
Authors	Wang H, Li S, Mahmood A, Yang S, Wang X, Shen Q, Shan T, Deng X, Li J, Hua X, Cui L, Delwart E, Zhang W
Title	Plasma virome of cattle from forest region revealed diverse small circular ssDNA viral genomes.
Journal	Virol J. 2018 Jan 15;15(1):11.
DBLINKS	KEGG BRITE: NC_037053 NC_074970 ICTV: 202304271 ViralZone: genus, family

Scientific Name	Bovine picornavirus [TAX:1564115]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Bopivirus; Bopivirus abovi; Bopivirus A
RefSeq	NC_026249 Bovine picornavirus isolate TCH6 polyprotein gene, complete cds. NC_076037 Bovine picornavirus genomic RNA, complete genome, strain: Bo-11-39/2009/JPN. NC_076038 Bovine picornavirus genomic RNA, complete genome, strain: Bo-12-3/2009/JPN.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_026249 NC_076037 NC_076038 ICTV: 202305591, 202308697, 202308698 ViralZone: family

Scientific Name	Bovine polyomavirus 1 [TAX:1561702]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; Epsilonpolyomavirus; Epsilonpolyomavirus bovis
GenBank	KM496323 Bovine polyomavirus 1 isolate 1S5, complete genome.
DBLINKS	ViralZone: family

Scientific Name	Bovine polyomavirus 2 [TAX:1578134]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; unclassified Polyomaviridae
RefSeq	NC_025811 Bovine polyomavirus 2 strain BPyV2-SF, complete genome.
Evidence	Literature
Reference	PMID: 25217712
Authors	Zhang W, Li L, Deng X, Kapusinszky B, Delwart E
Title	What is for dinner? Viral metagenomics of US store bought beef, pork, and chicken.
Journal	Virology. 2014 Nov;468-470:303-10.
Comment	beef
DBLINKS	KEGG BRITE: NC_025811 ViralZone: family

Scientific Name	Bovine polyomavirus 2a [TAX:1561703]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; unclassified Polyomaviridae; Bovine polyomavirus 2
GenBank	KM496324 Bovine polyomavirus-2a isolate 2aS11, complete genome.
DBLINKS	ViralZone: family

Scientific Name	Bovine polyomavirus 2b [TAX:1561704]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; unclassified Polyomaviridae; Bovine polyomavirus 2
GenBank	KM496325 Bovine polyomavirus-2b isolate 2bS5, complete genome.
DBLINKS	ViralZone: family

Scientific Name	Bovine polyomavirus 3 [TAX:1561705]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; unclassified Polyomaviridae
RefSeq	NC_025800 Bovine polyomavirus-3 isolate 3S5, complete genome.
Evidence	Other
Comment	beef
DBLINKS	KEGG BRITE: NC_025800 ViralZone: family

Scientific Name	Bovine respiratory coronavirus AH187 [TAX:502108]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Betacoronavirus gravedinis; Betacoronavirus 1; Bovine coronavirus
GenBank	FJ938065 Bovine respiratory coronavirus AH187, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 26268320
Authors	Lojkić I, Krešić N, Šimić I, Bedeković T
Title	Detection and molecular characterisation of bovine corona and toroviruses from Croatian cattle.
Journal	BMC Vet Res. 2015 Aug 13;11:202.
DBLINKS	ViralZone: family, genus

Scientific Name	Bovine respiratory coronavirus bovine/US/OH-440-TC/1996 [TAX:502105]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Betacoronavirus gravedinis; Betacoronavirus 1; Bovine coronavirus
GenBank	FJ938066 Bovine respiratory coronavirus bovine/US/OH-440-TC/1996, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 22443326
Authors	Izzo MM, Kirkland PD, Gu X, Lele Y, Gunn AA, House JK
Title	Comparison of three diagnostic techniques for detection of rotavirus and coronavirus in calf faeces in Australia.
Journal	Aust Vet J. 2012 Apr;90(4):122-9.
DBLINKS	ViralZone: family, genus

Scientific Name	bovine respiratory syncytial virus [TAX:3136119]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Pneumoviridae; Orthopneumovirus; Orthopneumovirus bovis
RefSeq	NC_001989 Bovine orthopneumovirus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001989 ViralZone: genus, family

Scientific Name	Bovine respiratory syncytial virus ATCC51908 [TAX:11247]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Pneumoviridae; Orthopneumovirus; Orthopneumovirus bovis; bovine respiratory syncytial virus
RefSeq	NC_038272 Bovine respiratory syncytial virus ATCC51908, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_038272 ICTV: 202301650 ViralZone: genus, family

Scientific Name	Bovine retrovirus CH15 [TAX:1822365]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Betaretrovirus; unclassified Betaretrovirus
RefSeq	NC_029852 Bovine retrovirus CH15 putative group-specific antigen, putative protease, putative viral DNA polymerase, and putative envelope protein genes, complete cds.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 26994586
Authors	Wüthrich D, Boujon CL, Truchet L, Selimovic-Hamza S, Oevermann A, Bouzalas IG, Bruggmann R, Seuberlich T
Title	Exploring the virome of cattle with non-suppurative encephalitis of unknown etiology by metagenomics.
Journal	Virology. 2016 Jun;493:22-30.
DBLINKS	KEGG BRITE: NC_029852 ViralZone: genus, family

Scientific Name	Bovine rhinitis A virus [TAX:1155188]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Aphthovirus bogeli
RefSeq	NC_038303 Bovine rhinitis A virus strain Sd-1 polyprotein gene, complete cds.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 25789939
Authors	Hause BM, Collin EA, Anderson J, Hesse RA, Anderson G
Title	Bovine rhinitis viruses are common in U.S. cattle with bovine respiratory disease.
Journal	PLoS One. 2015;10(3):e0121998.
Comment	Culture cell line: EBK cells
DBLINKS	KEGG BRITE: NC_038303 ICTV: 202301958 ViralZone: family, genus

Scientific Name	bovine rhinitis B virus 1 [TAX:2758977]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Aphthovirus reedi; Bovine rhinitis B virus
RefSeq	NC_010354 Bovine rhinitis B virus 1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_010354 ICTV: 202301959 ViralZone: family, genus

Scientific Name	Bovine rhinovirus 1 [TAX:1606765]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; unclassified Aphthovirus
RefSeq	NC_034245 Bovine rhinovirus 1 strain SD-1, complete genome.
Evidence	Literature
Reference	PMID: 2982346
Authors	Yamashita H, Akashi H, Inaba Y
Title	Isolation of a new serotype of bovine rhinovirus from cattle. Brief report.
Journal	Arch Virol. 1985;83(1-2):113-6.
Comment	Culture cell line: MDBK cell
DBLINKS	KEGG BRITE: NC_034245 ViralZone: family, genus

Scientific Name	Bovine serum-associated circular virus [TAX:2340909]
Lineage	Viruses; unclassified viruses
RefSeq	NC_040648 Bovine serum-associated circular virus strain 349 hypothetical protein gene, complete cds. NC_040718 Bovine serum-associated circular virus strain 281 hypothetical protein gene, complete cds.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 30218293
Authors	Weber MN, Cibulski SP, Silveira S, Siqueira FM, Mósena ACS, da Silva MS, Olegário JC, Varela APM, Teixeira TF, Bianchi MV, Driemeier D, Pavarini SP, Mayer FQ, Roehe PM, Canal CW
Title	Evaluation of the serum virome in calves persistently infected with Pestivirus A, presenting or not presenting mucosal disease.
Journal	Virus Genes. 2018 Dec;54(6):768-778.
DBLINKS	KEGG BRITE: NC_040648 NC_040718

Scientific Name	Bovine viral diarrhea virus 1 [TAX:11099]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pestivirus; Pestivirus bovis
RefSeq	NC_001461 Bovine viral diarrhea virus 1, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 2838957
Authors	Colett MS, Larson R, Gold C, Strick D, Anderson DK, Purchio AF
Title	Molecular cloning and nucleotide sequence of the pestivirus bovine viral diarrhea virus.
Journal	Virology. 1988 Jul;165(1):191-9.
Comment	Culture cell line: MDBK cell
DBLINKS	KEGG BRITE: NC_001461 ICTV: 202303153 ViralZone: genus

Scientific Name	Bovine viral diarrhea virus 1-SD1 [TAX:31656]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pestivirus; Pestivirus bovis
RefSeq	NC_076029 Bovine viral diarrhea virus 1-SD1 polyprotein gene, complete cds.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_076029 ICTV: 202303153 ViralZone: genus

Scientific Name	Bovine viral diarrhea virus 1b [TAX:981676]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pestivirus; Pestivirus bovis
GenBank	JN704144 Bovine viral diarrhea virus type 1b isolate 3156, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 33582856
Authors	Tian B, Cai D, Li W, Bu Q, Wang M, Ye G, Liu J, Wang Y, Gou L, Yi J, Zuo Z
Title	Identification and genotyping of a new subtype of bovine viral diarrhea virus 1 isolated from cattle with diarrhea.
Journal	Arch Virol. 2021 Apr;166(4):1259-1262.
Comment	Culture cell line+ MDBK cells
DBLINKS	ViralZone: genus

Scientific Name	Bovine viral diarrhea virus 2 [TAX:54315]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pestivirus; Pestivirus tauri
RefSeq	NC_039237 Bovine viral diarrhea virus 2 polyprotein gene, complete cds. NC_076032 Bovine viral diarrhea virus 2 strain XJ-04, complete genome.
Evidence	Literature
Reference	PMID: 7676648
Authors	Ridpath JF, Bolin SR
Title	The genomic sequence of a virulent bovine viral diarrhea virus (BVDV) from the type 2 genotype: detection of a large genomic insertion in a noncytopathic BVDV.
Journal	Virology. 1995 Sep 10;212(1):39-46.
Comment	Culture cell line: BT cells
DBLINKS	KEGG BRITE: NC_039237 NC_076032 ICTV: 202303154 ViralZone: genus

Scientific Name	Bovine viral diarrhea virus 2 C413 [TAX:60869]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pestivirus; Pestivirus tauri; Bovine viral diarrhea virus 2
GenBank	AF002227 Border disease virus strain C413, complete genome.
Evidence	Literature
Reference	Molecular cloning and nucleotide sequencing of the genome of border disease virus strain C413, Y Chen - 1997 - search.proquest.com
Comment	Culture cell line: MDBK cells
DBLINKS	ViralZone: genus

Scientific Name	Bovine viral diarrhea virus 3 Th/04_KhonKaen [TAX:402584]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pestivirus; Pestivirus brazilense
RefSeq	NC_012812 Bovine viral diarrhea virus 3 Th/04_KhonKaen, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_012812 ICTV: 202305783 ViralZone: genus

Scientific Name	Bovine viral diarrhea virus strain Oregon C24V [TAX:82470]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pestivirus; Pestivirus bovis; Bovine viral diarrhea virus isolates and strains
GenBank	AF091605 Bovine viral diarrhea virus strain Oregon C24V, complete genome.
Evidence	Literature
Reference	PMID: 1381537
Authors	Paton DJ, Lowings JP, Barrett AD
Title	Epitope mapping of the gp53 envelope protein of bovine viral diarrhea virus.
Journal	Virology. 1992 Oct;190(2):763-72.
Comment	Culture cell line: CT,BT cells
DBLINKS	ViralZone: genus

Scientific Name	Breda virus [TAX:46473]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Tornidovirineae; Tobaniviridae; Torovirinae; Torovirus; Renitovirus; Torovirus bovis; Bovine torovirus
RefSeq	NC_007447 Breda virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_007447 ICTV: 202301887 ViralZone: genus, family

Scientific Name	Bubaline alphaherpesvirus 1 [TAX:202910]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Alphaherpesvirinae; Varicellovirus; Varicellovirus bubalinealpha1
RefSeq	NC_043054 Bubaline alphaherpesvirus 1 strain b6, complete genome.
Evidence	Literature
Reference	PMID: 28063080
Authors	Scheffer CM, Varela AP, Cibulski SP, Schmidt C, Campos FS, Paim WP, Dos Santos RN, Teixeira TF, Loiko MR, Tochetto C, Dos Santos HF, de Lima DA, Cerva C, Mayer FQ, Petzhold SA, Franco AC, George TS, Spilki FR, Roehe PM
Title	Genome sequence of bubaline alphaherpesvirus 1 (BuHV1) isolated in Australia in 1972.
Journal	Arch Virol. 2017 May;162(5):1169-1176.
Comment	Culture cell line:MDBK
DBLINKS	KEGG BRITE: NC_043054 ICTV: 202301442 ViralZone: family, genus

Scientific Name	Calicivirus isolate TCG [TAX:243550]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; unclassified Caliciviridae
RefSeq	NC_006875 Calicivirus isolate TCG, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_006875 ViralZone: family

Scientific Name	Circoviridae bovine stool/BK/KOR/2011 [TAX:1127491]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Bovismacovirus; Bovismacovirus bovas1
RefSeq	NC_039054 Circoviridae bovine stool/BK/KOR/2011 isolate CP11-49-3, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_039054 ICTV: 202305945 ViralZone: family

Scientific Name	Circoviridae SFBeef [TAX:1548712]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae
RefSeq	NC_025216 Circoviridae SFBeef, complete genome.
Evidence	Literature
Reference	PMID: 25217712
Authors	Zhang W, Li L, Deng X, Kapusinszky B, Delwart E
Title	What is for dinner? Viral metagenomics of US store bought beef, pork, and chicken.
Journal	Virology. 2014 Nov;468-470:303-10.
DBLINKS	KEGG BRITE: NC_025216 ViralZone: family

Scientific Name	Coastal Plains virus [TAX:764599]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Tibrovirus; Tibrovirus coastal
RefSeq	NC_025397 Coastal Plains virus strain DPP53, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_025397 ICTV: 202301775 ViralZone: family, genus

Scientific Name	Cocal virus [TAX:50713]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Vesiculovirus; Vesiculovirus cocal
RefSeq	NC_028255 Cocal virus Indiana 2, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 18512001
Authors	Pauszek SJ, Allende R, Rodriguez LL
Title	Characterization of the full-length genomic sequences of vesicular stomatitis Cocal and Alagoas viruses.
Journal	Arch Virol. 2008;153(7):1353-7.
Comment	Culture cell line: BHK-21 cells
DBLINKS	KEGG BRITE: NC_028255 ICTV: 202301793 ViralZone: genus, family

Scientific Name	Cowpox virus [TAX:10243]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus; Orthopoxvirus cowpox
RefSeq	NC_003663 Cowpox virus, complete genome.
KEGG DISEASE	H02351 Cowpox
Evidence	UniProt
Evidence	Literature
Reference	PMID: 19828265
Authors	Essbauer S, Pfeffer M, Meyer H
Title	Zoonotic poxviruses.
Journal	Vet Microbiol. 2010 Jan 27;140(3-4):229-36.
DBLINKS	KEGG BRITE: NC_003663 KEGG GENOME: T40359 ICTV: 202304769 ViralZone: family, genus

Scientific Name	Cyclovirus PKbeef23/PAK/2009 [TAX:942032]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; Cyclovirus gaaye
RefSeq	NC_038405 Cyclovirus PKbeef23/PAK/2009 isolate PKbeef23, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 21177928
Authors	Li L, Shan T, Soji OB, Alam MM, Kunz TH, Zaidi SZ, Delwart E
Title	Possible cross-species transmission of circoviruses and cycloviruses among farm animals.
Journal	J Gen Virol. 2011 Apr;92(Pt 4):768-72.
DBLINKS	KEGG BRITE: NC_038405 ICTV: 202302947 ViralZone: family, genus

Scientific Name	Deltapapillomavirus 4 [TAX:337052]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Deltapapillomavirus
GenBank	X02346 Bovine papillomavirus - 1 complete genome.
Evidence	UniProt
DBLINKS	ViralZone: family, genus

Scientific Name	Enterovirus AN12 [TAX:1929150]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; unclassified Enterovirus
RefSeq	NC_033695 Enterovirus AN12 genomic RNA, complete genome, strain: AN12.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 28095784
Authors	Tsuchiaka S, Rahpaya SS, Otomaru K, Aoki H, Kishimoto M, Naoi Y, Omatsu T, Sano K, Okazaki-Terashima S, Katayama Y, Oba M, Nagai M, Mizutani T
Title	Identification of a novel bovine enterovirus possessing highly divergent amino acid sequences in capsid protein.
Journal	BMC Microbiol. 2017 Jan 17;17(1):18.
DBLINKS	KEGG BRITE: NC_033695 ICTV: 202301988 ViralZone: genus, family

Scientific Name	enterovirus D70 [TAX:12090]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus deconjuncti; Enterovirus D
GenBank	D00820 Human enterovirus 70 genomic RNA, complete genome, strain: J670/71.
KEGG DISEASE	H01421 Acute hemorrhagic conjunctivitis
Evidence	Literature
Reference	PMID: 2172447
Authors	Ryan MD, Jenkins O, Hughes PJ, Brown A, Knowles NJ, Booth D, Minor PD, Almond JW
Title	The complete nucleotide sequence of enterovirus type 70: relationships with other members of the picornaviridae.
Journal	J Gen Virol. 1990 Oct;71 ( Pt 10):2291-9.
Comment	Culture cell line: HEp-2c cells
DBLINKS	KEGG GENOME: T40334 ViralZone: genus, family

Scientific Name	enterovirus D94 [TAX:2015550]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus deconjuncti; Enterovirus D
GenBank	EF107097 Human enterovirus 94 isolate 19/04 from Democratic Republic of the Congo, complete genome.
Evidence	Literature
Reference	PMID: 17325357
Authors	Smura TP, Junttila N, Blomqvist S, Norder H, Kaijalainen S, Paananen A, Magnius LO, Hovi T, Roivainen M
Title	Enterovirus 94, a proposed new serotype in human enterovirus species D.
Journal	J Gen Virol. 2007 Mar;88(Pt 3):849-58.
Comment	Culture cell line: RD cells, GMK cells, Vero cells, L20B cells, BYHK21 cells, RK13 cells, MDBK cells, MDCK cells
DBLINKS	ViralZone: genus, family

Scientific Name	Enterovirus E [TAX:12064]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus eibovi
RefSeq	NC_001859 Bovine enterovirus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001859 ICTV: 202301987 ViralZone: genus, family

Scientific Name	Enterovirus F [TAX:1330520]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus fitauri
RefSeq	NC_021220 Enterovirus F strain BEV-261 polyprotein gene, complete cds.
Evidence	Literature
Reference	PMID: 16432025
Authors	Zell R, Krumbholz A, Dauber M, Hoey E, Wutzler P
Title	Molecular-based reclassification of the bovine enteroviruses.
Journal	J Gen Virol. 2006 Feb;87(Pt 2):375-85.
DBLINKS	KEGG BRITE: NC_021220 ICTV: 202301988 ViralZone: genus, family

Scientific Name	Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) [TAX:449133]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus; Orbivirus ruminantium; Epizootic hemorrhagic disease virus; Epizootic hemorrhagic disease virus 1
RefSeq	NC_013396 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 1. NC_013397 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 2. NC_013398 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 3. NC_013399 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 4. NC_013400 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 5. NC_013401 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 6. NC_013402 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 7. NC_013403 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 8. NC_013404 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 9. NC_013405 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 10.
Evidence	Literature
Reference	PMID: 19632280
Authors	Anthony SJ, Maan N, Maan S, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the core proteins VP1, VP3, VP4, VP6 and VP7 of epizootic haemorrhagic disease virus (EHDV).
Journal	Virus Res. 2009 Nov;145(2):187-99.
DBLINKS	KEGG BRITE: NC_013396 NC_013397 NC_013398 NC_013399 NC_013400 NC_013401 NC_013402 NC_013403 NC_013404 NC_013405 ICTV: 202304884 ViralZone: family, genus

Scientific Name	Epizootic hemorrhagic disease virus (serotype 2 / strain 439) [TAX:449134]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus; Orbivirus ruminantium; Epizootic hemorrhagic disease virus; Epizootic hemorrhagic disease virus 2
GenBank	AM744987 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 1. AM744988 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 2. AM744989 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 3. AM744990 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 4. AM744991 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 5. AM744992 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 6. AM744993 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 7. AM744994 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 8. AM744995 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 9. AM744996 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 10.
Evidence	Literature
Reference	PMID: 19632280
Authors	Anthony SJ, Maan N, Maan S, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the core proteins VP1, VP3, VP4, VP6 and VP7 of epizootic haemorrhagic disease virus (EHDV).
Journal	Virus Res. 2009 Nov;145(2):187-99.
Evidence	Literature
Reference	PMID: 19632281
Authors	Anthony SJ, Maan S, Maan N, Kgosana L, Bachanek-Bankowska K, Batten C, Darpel KE, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the outer-coat proteins VP2 and VP5 of epizootic haemorrhagic disease virus (EHDV): comparison of genetic and serological data to characterise the EHDV serogroup.
Journal	Virus Res. 2009 Nov;145(2):200-10.
Evidence	Literature
Reference	PMID: 19665508
Authors	Anthony SJ, Maan N, Maan S, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the non-structural proteins NS1, NS2 and NS3 of epizootic haemorrhagic disease virus (EHDV).
Journal	Virus Res. 2009 Nov;145(2):211-9.
DBLINKS	ViralZone: family, genus

Scientific Name	Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) [TAX:449142]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus; Orbivirus ruminantium; Epizootic hemorrhagic disease virus; Epizootic hemorrhagic disease virus 2
GenBank	AM745077 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 1. AM745078 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 2. AM745079 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 3. AM745080 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 4. AM745081 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 5. AM745082 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 6. AM745083 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 7. AM745084 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 8. AM745085 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 9. AM745086 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 10.
Evidence	Literature
Reference	PMID: 19632280
Authors	Anthony SJ, Maan N, Maan S, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the core proteins VP1, VP3, VP4, VP6 and VP7 of epizootic haemorrhagic disease virus (EHDV).
Journal	Virus Res. 2009 Nov;145(2):187-99.
Evidence	Literature
Reference	PMID: 19632281
Authors	Anthony SJ, Maan S, Maan N, Kgosana L, Bachanek-Bankowska K, Batten C, Darpel KE, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the outer-coat proteins VP2 and VP5 of epizootic haemorrhagic disease virus (EHDV): comparison of genetic and serological data to characterise the EHDV serogroup.
Journal	Virus Res. 2009 Nov;145(2):200-10.
Evidence	Literature
Reference	PMID: 19665508
Authors	Anthony SJ, Maan N, Maan S, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the non-structural proteins NS1, NS2 and NS3 of epizootic haemorrhagic disease virus (EHDV).
Journal	Virus Res. 2009 Nov;145(2):211-9.
DBLINKS	ViralZone: family, genus

Scientific Name	Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) [TAX:449137]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus; Orbivirus ruminantium; Epizootic hemorrhagic disease virus; Epizootic hemorrhagic disease virus 5
GenBank	AM745027 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 1. AM745028 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 2. AM745029 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 3. AM745030 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 4. AM745031 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 5. AM745032 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 6. AM745033 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 7. AM745034 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 8. AM745035 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 9. AM745036 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 10.
Evidence	Literature
Reference	PMID: 19632280
Authors	Anthony SJ, Maan N, Maan S, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the core proteins VP1, VP3, VP4, VP6 and VP7 of epizootic haemorrhagic disease virus (EHDV).
Journal	Virus Res. 2009 Nov;145(2):187-99.
Evidence	Literature
Reference	PMID: 19632281
Authors	Anthony SJ, Maan S, Maan N, Kgosana L, Bachanek-Bankowska K, Batten C, Darpel KE, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the outer-coat proteins VP2 and VP5 of epizootic haemorrhagic disease virus (EHDV): comparison of genetic and serological data to characterise the EHDV serogroup.
Journal	Virus Res. 2009 Nov;145(2):200-10.
Evidence	Literature
Reference	PMID: 19665508
Authors	Anthony SJ, Maan N, Maan S, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the non-structural proteins NS1, NS2 and NS3 of epizootic haemorrhagic disease virus (EHDV).
Journal	Virus Res. 2009 Nov;145(2):211-9.
DBLINKS	ViralZone: family, genus

Scientific Name	Epizootic hemorrhagic disease virus (serotype 6 / strain 318) [TAX:449141]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus; Orbivirus ruminantium; Epizootic hemorrhagic disease virus; Epizootic hemorrhagic disease virus 6
GenBank	AM745067 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 1. AM745068 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 2. AM745069 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 3. AM745070 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 4. AM745071 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 5. AM745072 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 6. AM745073 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 7. AM745074 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 8. AM745075 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 9. AM745076 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 10.
Evidence	Literature
Reference	PMID: 8972046
Authors	Mohammed ME, Aradaib IE, Mukhtar MM, Ghalib HW, Riemann HP, Oyejide A, Osburn BI
Title	Application of molecular biological techniques for detection of epizootic hemorrhagic disease virus (EHDV-318) recovered from a sentinel calf in central Sudan.
Journal	Vet Microbiol. 1996 Oct;52(3-4):201-8.
Evidence	Literature
Reference	PMID: 19632280
Authors	Anthony SJ, Maan N, Maan S, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the core proteins VP1, VP3, VP4, VP6 and VP7 of epizootic haemorrhagic disease virus (EHDV).
Journal	Virus Res. 2009 Nov;145(2):187-99.
Evidence	Literature
Reference	PMID: 19632281
Authors	Anthony SJ, Maan S, Maan N, Kgosana L, Bachanek-Bankowska K, Batten C, Darpel KE, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the outer-coat proteins VP2 and VP5 of epizootic haemorrhagic disease virus (EHDV): comparison of genetic and serological data to characterise the EHDV serogroup.
Journal	Virus Res. 2009 Nov;145(2):200-10.
Evidence	Literature
Reference	PMID: 19665508
Authors	Anthony SJ, Maan N, Maan S, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the non-structural proteins NS1, NS2 and NS3 of epizootic haemorrhagic disease virus (EHDV).
Journal	Virus Res. 2009 Nov;145(2):211-9.
DBLINKS	ViralZone: family, genus

Scientific Name	Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) [TAX:449138]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus; Orbivirus ruminantium; Epizootic hemorrhagic disease virus; Epizootic hemorrhagic disease virus 6
GenBank	AM745037 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 1. AM745038 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 2. AM745039 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 3. AM745040 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 4. AM745041 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 5. AM745042 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 6. AM745043 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 7. AM745044 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 8. AM745045 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 9. AM745046 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 10.
Evidence	Literature
Reference	PMID: 19632280
Authors	Anthony SJ, Maan N, Maan S, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the core proteins VP1, VP3, VP4, VP6 and VP7 of epizootic haemorrhagic disease virus (EHDV).
Journal	Virus Res. 2009 Nov;145(2):187-99.
Evidence	Literature
Reference	PMID: 19632281
Authors	Anthony SJ, Maan S, Maan N, Kgosana L, Bachanek-Bankowska K, Batten C, Darpel KE, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the outer-coat proteins VP2 and VP5 of epizootic haemorrhagic disease virus (EHDV): comparison of genetic and serological data to characterise the EHDV serogroup.
Journal	Virus Res. 2009 Nov;145(2):200-10.
Evidence	Literature
Reference	PMID: 19665508
Authors	Anthony SJ, Maan N, Maan S, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the non-structural proteins NS1, NS2 and NS3 of epizootic haemorrhagic disease virus (EHDV).
Journal	Virus Res. 2009 Nov;145(2):211-9.
DBLINKS	ViralZone: family, genus

Scientific Name	Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) [TAX:449139]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus; Orbivirus ruminantium; Epizootic hemorrhagic disease virus; Epizootic hemorrhagic disease virus 7
GenBank	AM745047 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 1. AM745048 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 2. AM745049 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 3. AM745050 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 4. AM745051 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 5. AM745052 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 6. AM745053 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 7. AM745054 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 8. AM745055 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 9. AM745056 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 10.
Evidence	Literature
Reference	PMID: 19632280
Authors	Anthony SJ, Maan N, Maan S, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the core proteins VP1, VP3, VP4, VP6 and VP7 of epizootic haemorrhagic disease virus (EHDV).
Journal	Virus Res. 2009 Nov;145(2):187-99.
Evidence	Literature
Reference	PMID: 19632281
Authors	Anthony SJ, Maan S, Maan N, Kgosana L, Bachanek-Bankowska K, Batten C, Darpel KE, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the outer-coat proteins VP2 and VP5 of epizootic haemorrhagic disease virus (EHDV): comparison of genetic and serological data to characterise the EHDV serogroup.
Journal	Virus Res. 2009 Nov;145(2):200-10.
Evidence	Literature
Reference	PMID: 19665508
Authors	Anthony SJ, Maan N, Maan S, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the non-structural proteins NS1, NS2 and NS3 of epizootic haemorrhagic disease virus (EHDV).
Journal	Virus Res. 2009 Nov;145(2):211-9.
DBLINKS	ViralZone: family, genus

Scientific Name	Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) [TAX:449140]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus; Orbivirus ruminantium; Epizootic hemorrhagic disease virus; Epizootic hemorrhagic disease virus 8
GenBank	AM745057 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 1. AM745058 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 2. AM745059 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 3. AM745060 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 4. AM745061 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 5. AM745062 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 6. AM745063 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 7. AM745064 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 8. AM745065 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 9. AM745066 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 10.
Evidence	Literature
Reference	PMID: 19632280
Authors	Anthony SJ, Maan N, Maan S, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the core proteins VP1, VP3, VP4, VP6 and VP7 of epizootic haemorrhagic disease virus (EHDV).
Journal	Virus Res. 2009 Nov;145(2):187-99.
Evidence	Literature
Reference	PMID: 19632281
Authors	Anthony SJ, Maan S, Maan N, Kgosana L, Bachanek-Bankowska K, Batten C, Darpel KE, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the outer-coat proteins VP2 and VP5 of epizootic haemorrhagic disease virus (EHDV): comparison of genetic and serological data to characterise the EHDV serogroup.
Journal	Virus Res. 2009 Nov;145(2):200-10.
Evidence	Literature
Reference	PMID: 19665508
Authors	Anthony SJ, Maan N, Maan S, Sutton G, Attoui H, Mertens PP
Title	Genetic and phylogenetic analysis of the non-structural proteins NS1, NS2 and NS3 of epizootic haemorrhagic disease virus (EHDV).
Journal	Virus Res. 2009 Nov;145(2):211-9.
DBLINKS	ViralZone: family, genus

Scientific Name	Epsilonpapillomavirus 1 [TAX:40537]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Epsilonpapillomavirus
RefSeq	NC_004195 Bovine papillomavirus type 5, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_004195 ICTV: 202304051 ViralZone: genus, family

Scientific Name	Epsilonpolyomavirus bovis [TAX:1891754]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; Epsilonpolyomavirus
RefSeq	NC_001442 Bovine polyomavirus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001442 ICTV: 202304493 ViralZone: family

Scientific Name	Eubenangee virus [TAX:40056]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus; Orbivirus eubenangeense
RefSeq	NC_038584 Eubenangee virus isolate AUS1963/01 segment 3, complete sequence. NC_038585 Eubenangee virus isolate AUS1963/01 segment 5, complete sequence. NC_038586 Eubenangee virus isolate AUS1963/01 segment 6, complete sequence. NC_038587 Eubenangee virus isolate AUS1963/01 segment 8, complete sequence. NC_038588 Eubenangee virus isolate AUS1963/01 segment 2, complete sequence. NC_038589 Eubenangee virus isolate AUS1963/01 segment 7, complete sequence. NC_038590 Eubenangee virus isolate AUS1963/01 segment 9, complete sequence. NC_038591 Eubenangee virus isolate AUS1963/01 segment 4, complete sequence. NC_038592 Eubenangee virus isolate AUS1963/01 segment 1, complete sequence. NC_038593 Eubenangee virus isolate AUS1963/01 segment 10, complete sequence.
Evidence	Literature
Reference	PMID: 22438872
Authors	Belaganahalli MN, Maan S, Maan NS, Nomikou K, Pritchard I, Lunt R, Kirkland PD, Attoui H, Brownlie J, Mertens PP
Title	Full genome sequencing and genetic characterization of Eubenangee viruses identify Pata virus as a distinct species within the genus Orbivirus.
Journal	PLoS One. 2012;7(3):e31911.
Comment	Source of isolation: mosquitoes and Culicoides Source of isolation: mosquitoes and Culicoides
DBLINKS	KEGG BRITE: NC_038584 NC_038585 NC_038586 NC_038587 NC_038588 NC_038589 NC_038590 NC_038591 NC_038592 NC_038593 ICTV: 202304886 ViralZone: family, genus

Scientific Name	Faeces associated gemycircularvirus 22 [TAX:1843742]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemycircularvirus; Gemycircularvirus bovas1; bovine associated gemycircularvirus 1
RefSeq	NC_030146 Faeces associated gemycircularvirus 22 isolate 52_Fec78023_cow, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_030146 ICTV: 202303554 ViralZone: family, genus

Scientific Name	Foot-and-mouth disease virus A [TAX:12111]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Aphthovirus vesiculae; Foot-and-mouth disease virus
GenBank	AY593765 Foot-and-mouth disease virus A isolate a22turkey iso66, complete genome.
Evidence	Literature
Reference	PMID: 15858032
Authors	Carrillo C, Tulman ER, Delhon G, Lu Z, Carreno A, Vagnozzi A, Kutish GF, Rock DL
Title	Comparative genomics of foot-and-mouth disease virus.
Journal	J Virol. 2005 May;79(10):6487-504.
Comment	Culture cell line: BTT, bovine tongue tissue
DBLINKS	ViralZone: family, genus

Scientific Name	Foot-and-mouth disease virus Asia 1 [TAX:110195]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Aphthovirus vesiculae; Foot-and-mouth disease virus
GenBank	AY593796 Foot-and-mouth disease virus Asia 1 isolate asia1-2isrl3-63 iso6, complete genome.
Evidence	Literature
Reference	PMID: 15858032
Authors	Carrillo C, Tulman ER, Delhon G, Lu Z, Carreno A, Vagnozzi A, Kutish GF, Rock DL
Title	Comparative genomics of foot-and-mouth disease virus.
Journal	J Virol. 2005 May;79(10):6487-504.
DBLINKS	ViralZone: family, genus

Scientific Name	Foot-and-mouth disease virus C1 [TAX:12121]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Aphthovirus vesiculae; Foot-and-mouth disease virus; Foot and mouth disease virus C
GenBank	AY593805 Foot-and-mouth disease virus C1 isolate c1ober iso88, complete genome.
Evidence	UniProt
DBLINKS	ICTV: 202301961 ViralZone: family, genus

Scientific Name	Foot-and-mouth disease virus O [TAX:12118]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Aphthovirus vesiculae; Foot-and-mouth disease virus
RefSeq	NC_039210 Foot-and-mouth disease virus O isolate o6pirbright iso58, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_039210 ICTV: 202301961 ViralZone: family, genus

Scientific Name	Foot-and-mouth disease virus O/UKG/4014/2001 [TAX:461292]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Aphthovirus vesiculae; Foot-and-mouth disease virus; Foot-and-mouth disease virus O
GenBank	EF552693 Foot-and-mouth disease virus O/UKG/4014/2001, complete genome.
Evidence	Literature
Reference	PMID: 18230598
Authors	Cottam EM, Thébaud G, Wadsworth J, Gloster J, Mansley L, Paton DJ, King DP, Haydon DT
Title	Integrating genetic and epidemiological data to determine transmission pathways of foot-and-mouth disease virus.
Journal	Proc Biol Sci. 2008 Apr 22;275(1637):887-95.
DBLINKS	ViralZone: family, genus

Scientific Name	Foot-and-mouth disease virus O/UKG/4998/2001 [TAX:461293]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Aphthovirus vesiculae; Foot-and-mouth disease virus; Foot-and-mouth disease virus O
GenBank	EF552694 Foot-and-mouth disease virus O/UKG/4998/2001, complete genome.
Evidence	Literature
Reference	PMID: 18230598
Authors	Cottam EM, Thébaud G, Wadsworth J, Gloster J, Mansley L, Paton DJ, King DP, Haydon DT
Title	Integrating genetic and epidemiological data to determine transmission pathways of foot-and-mouth disease virus.
Journal	Proc Biol Sci. 2008 Apr 22;275(1637):887-95.
DBLINKS	ViralZone: family, genus

Scientific Name	Foot-and-mouth disease virus O/UKG/5470/2001 [TAX:461295]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Aphthovirus vesiculae; Foot-and-mouth disease virus; Foot-and-mouth disease virus O
GenBank	EF552696 Foot-and-mouth disease virus O/UKG/5470/2001, complete genome.
Evidence	Literature
Reference	PMID: 18230598
Authors	Cottam EM, Thébaud G, Wadsworth J, Gloster J, Mansley L, Paton DJ, King DP, Haydon DT
Title	Integrating genetic and epidemiological data to determine transmission pathways of foot-and-mouth disease virus.
Journal	Proc Biol Sci. 2008 Apr 22;275(1637):887-95.
DBLINKS	ViralZone: family, genus

Scientific Name	Foot-and-mouth disease virus O/UKG/7039/2001 [TAX:461289]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Aphthovirus vesiculae; Foot-and-mouth disease virus; Foot-and-mouth disease virus O
GenBank	EF552690 Foot-and-mouth disease virus O/UKG/7039/2001, complete genome.
Evidence	Literature
Reference	PMID: 18230598
Authors	Cottam EM, Thébaud G, Wadsworth J, Gloster J, Mansley L, Paton DJ, King DP, Haydon DT
Title	Integrating genetic and epidemiological data to determine transmission pathways of foot-and-mouth disease virus.
Journal	Proc Biol Sci. 2008 Apr 22;275(1637):887-95.
DBLINKS	ViralZone: family, genus

Scientific Name	Foot-and-mouth disease virus O/UKG/9161/2001 [TAX:461290]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Aphthovirus vesiculae; Foot-and-mouth disease virus; Foot-and-mouth disease virus O
GenBank	EF552691 Foot-and-mouth disease virus O/UKG/9161/2001, complete genome.
Evidence	Literature
Reference	PMID: 18230598
Authors	Cottam EM, Thébaud G, Wadsworth J, Gloster J, Mansley L, Paton DJ, King DP, Haydon DT
Title	Integrating genetic and epidemiological data to determine transmission pathways of foot-and-mouth disease virus.
Journal	Proc Biol Sci. 2008 Apr 22;275(1637):887-95.
DBLINKS	ViralZone: family, genus

Scientific Name	Fukuoka virus [TAX:318849]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Ledantevirus; Ledantevirus fukuoka
RefSeq	NC_034454 Fukuoka virus nucleoprotein, phosphoprotein, matrix, hypothetical protein, glycoprotein, and polymerase genes, complete cds.
Evidence	Literature
Reference	PMID: 1455623
Authors	Noda M, Inaba Y, Banjo M, Kubo M
Title	Isolation of Fukuoka virus, a member of the Kern Canyon serogroup viruses of the family Rhabdoviridae, from cattle.
Journal	Vet Microbiol. 1992 Oct;32(3-4):267-71.
DBLINKS	KEGG BRITE: NC_034454 ICTV: 202301709 ViralZone: family, genus

Scientific Name	Guangxi orbivirus [TAX:2306813]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus; unclassified Orbivirus
RefSeq	NC_040474 Guangxi orbivirus strain V172/GX/2015 segment 7, complete sequence. NC_040475 Guangxi orbivirus strain V172/GX/2015 segment 10, complete sequence. NC_040476 Guangxi orbivirus strain V172/GX/2015 segment 3, complete sequence. NC_040477 Guangxi orbivirus strain V172/GX/2015 segment 8, complete sequence. NC_040478 Guangxi orbivirus strain V172/GX/2015 segment 1, complete sequence. NC_040479 Guangxi orbivirus strain V172/GX/2015 segment 2, complete sequence. NC_040480 Guangxi orbivirus strain V172/GX/2015 segment 6, complete sequence. NC_040481 Guangxi orbivirus strain V172/GX/2015 segment 5, complete sequence. NC_040482 Guangxi orbivirus strain V172/GX/2015 segment 9, complete sequence. NC_040847 Guangxi orbivirus strain V172/GX/2015 segment 4, complete sequence.
DBLINKS	KEGG BRITE: NC_040474 NC_040475 NC_040476 NC_040477 NC_040478 NC_040479 NC_040480 NC_040481 NC_040482 NC_040847 ViralZone: family, genus

Scientific Name	HCBI9.212 virus [TAX:1516080]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemykrogvirus; Gemykrogvirus bovas1; Bovine associated gemykrogvirus 1
RefSeq	NC_024690 HCBI9.212 virus complete sequence.
Evidence	Literature
Reference	PMID: 25169858
Authors	Lamberto I, Gunst K, Müller H, Zur Hausen H, de Villiers EM
Title	Mycovirus-like DNA virus sequences from cattle serum and human brain and serum samples from multiple sclerosis patients.
Journal	Genome Announc. 2014 Aug 28;2(4).
DBLINKS	KEGG BRITE: NC_024690 ICTV: 202303625 ViralZone: family, genus

Scientific Name	Hepacivirus bovis [TAX:3052226]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Hepacivirus
RefSeq	NC_038432 Hepacivirus N, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_038432 ICTV: 202303138 ViralZone: genus

Scientific Name	Hervey virus [TAX:1554500]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Rubulavirinae; Pararubulavirus; Pararubulavirus herveyense
RefSeq	NC_055459 UNVERIFIED: Hervey virus isolate BO6 genomic sequence.
Evidence	Literature
Reference	PMID: 29390028
Authors	Kohl C, Tachedjian M, Todd S, Monaghan P, Boyd V, Marsh GA, Crameri G, Field H, Kurth A, Smith I, Wang LF
Title	Hervey virus: Study on co-circulation with Henipaviruses in Pteropid bats within their distribution range from Australia to Africa.
Journal	PLoS One. 2018;13(2):e0191933.
Comment	Culture cell line: Vero E6, Bovine kidney, PaKi, PaHe, Equine kidney, CRFK and LoVo cells
DBLINKS	KEGG BRITE: NC_055459 ICTV: 202307558 ViralZone: family, genus

Scientific Name	HoBi-like pestivirus [TAX:381707]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pestivirus; Pestivirus brazilense
GenBank	FJ040215 HoBi-like pestivirus strain Th/04_KhonKaen, complete genome. HQ231763 Bovine viral diarrhea virus 3 strain Italy-1/10-1, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 19349128
Authors	Liu L, Kampa J, Belák S, Baule C
Title	Virus recovery and full-length sequence analysis of atypical bovine pestivirus Th/04_KhonKaen.
Journal	Vet Microbiol. 2009 Jul 2;138(1-2):62-8.
Evidence	Literature
Reference	PMID: 21801648
Authors	Decaro N, Lucente MS, Mari V, Cirone F, Cordioli P, Camero M, Sciarretta R, Losurdo M, Lorusso E, Buonavoglia C
Title	Atypical pestivirus and severe respiratory disease in calves, Europe.
Journal	Emerg Infect Dis. 2011 Aug;17(8):1549-52.
DBLINKS	ViralZone: genus

Scientific Name	hunnivirus A1 [TAX:1233320]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Hunnivirus; Hunnivirus amagyari; Hunnivirus A
RefSeq	NC_018668 Bovine hungarovirus 1 strain BHUV1/2008/HUN, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_018668 ICTV: 202302013 ViralZone: genus, family

Scientific Name	Japanese encephalitis virus [TAX:11072]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus japonicum
RefSeq	NC_001437 Japanese encephalitis virus, genome.
KEGG DISEASE	H01533 Japanese encephalitis
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001437 KEGG GENOME: T40052 ICTV: 202303087 ViralZone: genus

Scientific Name	Kimberley virus [TAX:318835]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Ephemerovirus; Ephemerovirus kimberley
RefSeq	NC_025396 Kimberley virus isolate CS368, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_025396 ICTV: 202301685 ViralZone: genus, family

Scientific Name	Kobuvirus bejaponia [TAX:194965]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Kodimesavirinae; Kobuvirus
RefSeq	NC_004421 Aichivirus B genomic RNA, complete genome, strain:U-1.
Evidence	Literature
Reference	PMID: 14573811
Authors	Yamashita T, Ito M, Kabashima Y, Tsuzuki H, Fujiura A, Sakae K
Title	Isolation and characterization of a new species of kobuvirus associated with cattle.
Journal	J Gen Virol. 2003 Nov;84(Pt 11):3069-77.
Comment	Culture cell line: Vero cells, Hela cells
DBLINKS	KEGG BRITE: NC_004421 ICTV: 202302016 ViralZone: genus, family

Scientific Name	Kobuvirus cattle/Kagoshima-1-22-KoV/2014/JPN [TAX:1659220]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Kodimesavirinae; Kobuvirus; Kobuvirus dekago
RefSeq	NC_027919 Kobuvirus cattle/Kagoshima-1-22-KoV/2014/JPN genomic RNA, nearly complete genome, strain: Kagoshima-1-22-KoV/2014/JPN.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 26369290
Authors	Otomaru K, Naoi Y, Haga K, Omatsu T, Uto T, Koizumi M, Masuda T, Yamasato H, Takai H, Aoki H, Tsuchiaka S, Sano K, Okazaki S, Katayama Y, Oba M, Furuya T, Shirai J, Katayama K, Mizutani T, Nagai M
Title	Detection of novel kobu-like viruses in Japanese black cattle in Japan.
Journal	J Vet Med Sci. 2015 Sep 11;.
DBLINKS	KEGG BRITE: NC_027919 ICTV: 202302018 ViralZone: genus, family

Scientific Name	Kobuvirus cattle/Kagoshima-2-24-KoV/2015/JPN [TAX:1659219]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Kodimesavirinae; Kobuvirus; Kobuvirus dekago
RefSeq	NC_027918 Kobuvirus cattle/Kagoshima-2-24-KoV/2015/JPN genomic RNA, complete genome, strain: Kagoshima-2-24-KoV/2015/JPN.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 26369290
Authors	Otomaru K, Naoi Y, Haga K, Omatsu T, Uto T, Koizumi M, Masuda T, Yamasato H, Takai H, Aoki H, Tsuchiaka S, Sano K, Okazaki S, Katayama Y, Oba M, Furuya T, Shirai J, Katayama K, Mizutani T, Nagai M
Title	Detection of novel kobu-like viruses in Japanese black cattle in Japan.
Journal	J Vet Med Sci. 2015 Sep 11;.
DBLINKS	KEGG BRITE: NC_027918 ICTV: 202302018 ViralZone: genus, family

Scientific Name	Koolpinyah virus [TAX:1550518]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Ephemerovirus; Ephemerovirus koolpinyah
RefSeq	NC_028239 Koolpinyah virus isolate DPP819, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_028239 ICTV: 202301686 ViralZone: genus, family

Scientific Name	Louping ill virus [TAX:11086]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus loupingi
RefSeq	NC_001809 Louping ill virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001809 KEGG GENOME: T40112 ICTV: 202303096 ViralZone: genus

Scientific Name	Lumpy skin disease virus [TAX:59509]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Capripoxvirus; Capripoxvirus lumpyskinpox
GenBank	AF325528 Lumpy skin disease virus NI-2490 isolate Neethling 2490, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 11435593
Authors	Tulman ER, Afonso CL, Lu Z, Zsak L, Kutish GF, Rock DL
Title	Genome of lumpy skin disease virus.
Journal	J Virol. 2001 Aug;75(15):7122-30.
DBLINKS	ViralZone: family, genus

Scientific Name	Lumpy skin disease virus NI-2490 [TAX:376849]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Capripoxvirus; Capripoxvirus lumpyskinpox; Lumpy skin disease virus
RefSeq	NC_003027 Lumpy skin disease virus NI-2490, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 11435593
Authors	Tulman ER, Afonso CL, Lu Z, Zsak L, Kutish GF, Rock DL
Title	Genome of lumpy skin disease virus.
Journal	J Virol. 2001 Aug;75(15):7122-30.
DBLINKS	KEGG BRITE: NC_003027 ICTV: 202304752 ViralZone: family, genus

Scientific Name	Lyssavirus rabies [TAX:11292]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Lyssavirus
RefSeq	NC_001542 Rabies virus, complete genome.
KEGG DISEASE	H00377 Rabies
Evidence	Literature
Reference	PMID: 15297743
Authors	Sato G, Itou T, Shoji Y, Miura Y, Mikami T, Ito M, Kurane I, Samara SI, Carvalho AA, Nociti DP, Ito FH, Sakai T
Title	Genetic and phylogenetic analysis of glycoprotein of rabies virus isolated from several species in Brazil.
Journal	J Vet Med Sci. 2004 Jul;66(7):747-53.
DBLINKS	KEGG BRITE: NC_001542 KEGG GENOME: T40022 ICTV: 202301733 ViralZone: genus, family

Scientific Name	Nebovirus Bo/M3641/2011/HUN [TAX:1212483]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Nebovirus; unclassified Nebovirus
GenBank	JX018212 Nebovirus Bo/M3641/2011/HUN, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Nebraska virus [TAX:2847999]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Nebovirus; Nebovirus newburyense; Newbury 1 virus
RefSeq	NC_004064 Nebraska virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_004064 ICTV: 202302804 ViralZone: genus, family

Scientific Name	Newbury agent 1 [TAX:331642]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Nebovirus; Nebovirus newburyense; Newbury 1 virus
RefSeq	NC_007916 Newbury agent 1 virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_007916 ICTV: 202302804 ViralZone: genus, family

Scientific Name	Norovirus GIII [TAX:340017]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norovirus norwalkense; Norwalk virus
RefSeq	NC_029645 Norovirus GIII, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_029645 ViralZone: genus, family

Scientific Name	Orf virus [TAX:10258]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Parapoxvirus; Parapoxvirus orf
RefSeq	NC_005336 Orf virus, complete genome.
KEGG DISEASE	H02354 Orf; Contagious pustular dermatitis; Contagious ecthyma
Evidence	Literature
Reference	PMID: 14671098
Authors	Delhon G, Tulman ER, Afonso CL, Lu Z, de la Concha-Bermejillo A, Lehmkuhl HD, Piccone ME, Kutish GF, Rock DL
Title	Genomes of the parapoxviruses ORF virus and bovine papular stomatitis virus.
Journal	J Virol. 2004 Jan;78(1):168-77.
DBLINKS	KEGG BRITE: NC_005336 KEGG GENOME: T40126 ICTV: 202304780 ViralZone: family, genus

Scientific Name	Orthopoxvirus vaccinia [TAX:10245]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus
RefSeq	NC_006998 Vaccinia virus, complete genome.
KEGG DISEASE	H02352 Vaccinia
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_006998 KEGG GENOME: T40360 ICTV: 202304775 ViralZone: family, genus

Scientific Name	Ovine mastadenovirus A [TAX:114424]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus bovidae
RefSeq	AC_000001 Ovine adenovirus A, complete genome.
Evidence	Literature
Reference	PMID: 14573794
Authors	Davison AJ, Benko M, Harrach B
Title	Genetic content and evolution of adenoviruses.
Journal	J Gen Virol. 2003 Nov;84(Pt 11):2895-908.
Comment	See Bovine adenovirus 2 ATCC VR-314.
DBLINKS	KEGG BRITE: AC_000001 ViralZone: genus, family

Scientific Name	Palyam virus [TAX:40059]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus; Orbivirus palyamense
RefSeq	NC_005986 Chuzan virus segment 2, complete sequence. NC_005987 Chuzan virus segment 6, complete sequence. NC_005988 Chuzan virus segment 7, complete sequence. NC_005989 Chuzan virus segment 3, complete sequence. NC_005990 Palyam virus segment 1, complete sequence. NC_005991 Chuzan virus segment 4, complete sequence. NC_005992 Chuzan virus segment 9, complete sequence. NC_005993 Chuzan virus segment 5, complete sequence. NC_005994 Chuzan virus segment 8, complete sequence. NC_005995 Chuzan virus segment 10, complete sequence.
Evidence	Literature
Reference	PMID: 9934703
Authors	Yamakawa M, Furuuchi S, Minobe Y
Title	Molecular characterization of double-stranded RNA segments encoding the major capsid proteins of a Palyam serogroup orbivirus that caused an epizootic of congenital abnormalities in cattle.
Journal	J Gen Virol. 1999 Jan;80 ( Pt 1):205-8.
DBLINKS	KEGG BRITE: NC_005986 NC_005987 NC_005988 NC_005989 NC_005990 NC_005991 NC_005992 NC_005993 NC_005994 NC_005995 ICTV: 202304891 ViralZone: family, genus

Scientific Name	parainfluenza virus 5 [TAX:2905673]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Rubulavirinae; Orthorubulavirus; Orthorubulavirus mammalis
RefSeq	NC_006430 Parainfluenza virus 5 strain W3A.
Evidence	Literature
Reference	PMID: 23807746
Authors	Lee YN, Lee C
Title	Complete genome sequence of a novel porcine parainfluenza virus 5 isolate in Korea.
Journal	Arch Virol. 2013 Aug;158(8):1765-72.
Comment	Culture cell line: Vero cells
Evidence	Literature
Reference	PMID: 26583313
Authors	Liu Y, Li N, Zhang S, Zhang F, Lian H, Hu R
Title	Parainfluenza Virus 5 as Possible Cause of Severe Respiratory Disease in Calves, China.
Journal	Emerg Infect Dis. 2015 Dec;21(12):2242-4.
Comment	Culture cell line: Vero cells
Evidence	Literature
Reference	PMID: 28138777
Authors	Zhai JQ, Zhai SL, Lin T, Liu JK, Wang HX, Li B, Zhang H, Zou SZ, Zhou X, Wu MF, Chen W, Luo ML
Title	First complete genome sequence of parainfluenza virus 5 isolated from lesser panda.
Journal	Arch Virol. 2017 May;162(5):1413-1418.
Comment	Culture cell line: Vero cells
Evidence	Literature
Reference	PMID: 31450796
Authors	Feehan BJ, Penin AA, Mukhin AN, Kumar D, Moskvina AS, Khametova KM, Yuzhakov AG, Musienko MI, Zaberezhny AD, Aliper TI, Marthaler D, Alekseev KP
Title	Novel <i>Mammalian orthorubulavirus 5</i> Discovered as Accidental Cell Culture Contaminant.
Journal	Viruses. 2019 Aug 23;11(9).
Comment	Culture cell line: Vero cells
DBLINKS	KEGG BRITE: NC_006430 ICTV: 202301632 ViralZone: family, genus

Scientific Name	Peaton virus [TAX:159151]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus peachesterense
RefSeq	NC_043549 Peaton virus N and NSs genes, segment S, genomic RNA, isolate CSIRO 110. NC_043550 Peaton virus RdRp gene for RNA-dependent RNA polymerase, segment L, genomic RNA, isolate CSIRO 110. NC_043551 Peaton virus Gn-Gc-NSm gene for M polyprotein, segment M, genomic RNA, isolate CSIRO 110.
Evidence	Literature
Reference	PMID: 7436869
Authors	St George TD, Standfast HA, Cybinski DH, Filippich C, Carley JG
Title	Peaton virus: a new Simbu group arbovirus isolated from cattle and Culicoides brevitarsis in Australia.
Journal	Aust J Biol Sci. 1980 May;33(2):235-43.
Comment	Culture cell line: BHK21 cells Culture cell line: BHK21 cells
DBLINKS	KEGG BRITE: NC_043549 NC_043550 NC_043551 ICTV: 202306380 ViralZone: genus, family

Scientific Name	Pestivirus PG-2 [TAX:219447]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pestivirus; Pestivirus giraffae
GenBank	KJ660072 Pestivirus PG-2, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus

Scientific Name	Porcine faeces associated circular DNA molecule-1 [TAX:1843772]
Lineage	Viruses; unclassified viruses
RefSeq	NC_030150 Porcine faeces associated circular DNA molecule-1 isolate 23_Fec22_cow, complete sequence.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27211884
Authors	Steel O, Kraberger S, Sikorski A, Young LM, Catchpole RJ, Stevens AJ, Ladley JJ, Coray DS, Stainton D, Dayaram A, Julian L, van Bysterveldt K, Varsani A
Title	Circular replication-associated protein encoding DNA viruses identified in the faecal matter of various animals in New Zealand.
Journal	Infect Genet Evol. 2016 Sep;43:151-64.
DBLINKS	KEGG BRITE: NC_030150

Scientific Name	Porcine parvovirus [TAX:10796]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Protoparvovirus; Protoparvovirus ungulate1
RefSeq	NC_001718 Porcine parvovirus, complete genome.
Evidence	Literature
Reference	PMID: 8642680
Authors	Bergeron J, Hébert B, Tijssen P
Title	Genome organization of the Kresse strain of porcine parvovirus: identification of the allotropic determinant and comparison with those of NADL-2 and field isolates.
Journal	J Virol. 1996 Apr;70(4):2508-15.
DBLINKS	KEGG BRITE: NC_001718 ICTV: 202304277 ViralZone: genus, family

Scientific Name	Pseudocowpox virus [TAX:129726]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Parapoxvirus; Parapoxvirus pseudocowpox
RefSeq	NC_013804 Pseudocowpox virus, complete genome.
Evidence	Literature
Reference	PMID: 20107016
Authors	Hautaniemi M, Ueda N, Tuimala J, Mercer AA, Lahdenperä J, McInnes CJ
Title	The genome of pseudocowpoxvirus: comparison of a reindeer isolate and a reference strain.
Journal	J Gen Virol. 2010 Jun;91(Pt 6):1560-76.
DBLINKS	KEGG BRITE: NC_013804 ICTV: 202304782 ViralZone: family, genus

Scientific Name	Respirovirus bovis [TAX:3052729]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Feraresvirinae; Respirovirus
RefSeq	NC_002161 Bovine parainfluenza virus 3, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_002161 ICTV: 202301621 ViralZone: genus, family

Scientific Name	Rift Valley fever virus [TAX:11588]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus riftense
RefSeq	NC_014395 Rift Valley fever virus segment S, complete genome. NC_014396 Rift Valley fever virus segment M, complete genome. NC_014397 Rift Valley fever virus segment L, complete genome.
KEGG DISEASE	H01549 Rift Valley fever
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_014395 NC_014396 NC_014397 KEGG GENOME: T40030 ICTV: 202300163 ViralZone: family, genus

Scientific Name	Rinderpest morbillivirus [TAX:11241]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Morbillivirus pecoris
GenBank	GU168576 Rinderpest virus strain LATC06, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Rinderpest virus (strain Kabete O) [TAX:11242]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Morbillivirus pecoris; Rinderpest morbillivirus
RefSeq	NC_006296 Rinderpest virus (strain Kabete O), complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_006296 ICTV: 202301618 ViralZone: genus, family

Scientific Name	Rotavirus A [TAX:28875]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Rotavirus; Rotavirus alphagastroenteritidis
RefSeq	NC_011500 Rotavirus A segment 5, complete genome. NC_011501 Rotavirus A segment 7, complete genome. NC_011502 Rotavirus A segment 8, complete genome. NC_011503 Rotavirus A segment 9, complete genome. NC_011504 Rotavirus A segment 10, complete genome. NC_011505 Rotavirus A segment 11, complete genome. NC_011506 Rotavirus A segment 2, complete genome. NC_011507 Rotavirus A segment 1, complete genome. NC_011508 Rotavirus A segment 3, complete genome. NC_011509 Rotavirus A segment 6, complete genome. NC_011510 Rotavirus A segment 4, complete genome.
KEGG DISEASE	H00975 Rotaviral enteritis; Rotaviral gastroenteritis H01430 Viral gastroenteritis
Evidence	Literature
Reference	PMID: 17059839
Authors	Small C, Barro M, Brown TL, Patton JT
Title	Genome heterogeneity of SA11 rotavirus due to reassortment with "O" agent.
Journal	Virology. 2007 Mar 15;359(2):415-24.
Comment	Culture cell line: bovine kidney cells, African green monkey kidney cells Culture cell line: bovine kidney cells, African green monkey kidney cells,
DBLINKS	KEGG BRITE: NC_011500 NC_011501 NC_011502 NC_011503 NC_011504 NC_011505 NC_011506 NC_011507 NC_011508 NC_011509 NC_011510 KEGG GENOME: T40092 ICTV: 202304905 ViralZone: family, genus

Scientific Name	Sabo virus [TAX:159138]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus saboense
RefSeq	NC_043552 Sabo virus Gn-Gc-NSm gene for M polyprotein, segment M, genomic RNA, isolate IB AN 9398. NC_043553 Sabo virus RdRp gene for RNA-dependent RNA polymerase, segment L, genomic RNA, isolate IB AN 9398. NC_043554 Sabo virus N and NSs genes, segment S, genomic RNA, isolate IB AN 9398.
Evidence	Literature
Reference	PMID: 4634776
Authors	Causey OR, Kemp GE, Causey CE, Lee VH
Title	Isolations of Simbu-group viruses in Ibadan, Nigeria 1964-69, including the new types Sango, Shamonda, Sabo and Shuni.
Journal	Ann Trop Med Parasitol. 1972 Sep;66(3):357-62.
DBLINKS	KEGG BRITE: NC_043552 NC_043553 NC_043554 ICTV: 202306353 ViralZone: genus, family

Scientific Name	Sango virus [TAX:159152]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus sangoense
RefSeq	NC_043555 Sango virus Gn-Gc-NSm gene for M polyprotein, segment M, genomic RNA, isolate An 5077. NC_043556 Sango virus RdRp gene for RNA-dependent RNA polymerase, segment L, genomic RNA, isolate An 5077. NC_043557 Sango virus N and NSs genes, segment S, genomic RNA, isolate An 5077.
Evidence	Literature
Reference	PMID: 4156616
Authors	Metselaar D, Henderson BE, Kirya GB, Tukei PM, de Geus A
Title	Isolation of arboviruses in Kenya, 1966-1971.
Journal	Trans R Soc Trop Med Hyg. 1974;68(2):114-23.
DBLINKS	KEGG BRITE: NC_043555 NC_043556 NC_043557 ICTV: 202306381 ViralZone: genus, family

Scientific Name	Sathuperi virus [TAX:159141]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus schmallenbergense
RefSeq	NC_018461 Sathuperi virus RdRp gene for RNA-dependent RNA polymerase, segment L, genomic RNA. NC_018462 Sathuperi virus N and NSs genes, segment S, genomic RNA. NC_018466 Sathuperi virus Gn-Gc-NSm gene for M polyprotein, segment M, genomic RNA.
Evidence	Literature
Reference	PMID: 22588368
Authors	Yanase T, Kato T, Aizawa M, Shuto Y, Shirafuji H, Yamakawa M, Tsuda T
Title	Genetic reassortment between Sathuperi and Shamonda viruses of the genus Orthobunyavirus in nature: implications for their genetic relationship to Schmallenberg virus.
Journal	Arch Virol. 2012 Aug;157(8):1611-6.
Comment	Vector: Culicoides oxystoma, Culex spp.
Evidence	Literature
Reference	PMID: 23017842
Authors	Goller KV, Höper D, Schirrmeier H, Mettenleiter TC, Beer M
Title	Schmallenberg virus as possible ancestor of Shamonda virus.
Journal	Emerg Infect Dis. 2012 Oct;18(10):1644-6.
Comment	Vector: Culicoides oxystoma, Culex spp.
DBLINKS	KEGG BRITE: NC_018461 NC_018462 NC_018466 ICTV: 202300126 ViralZone: genus, family

Scientific Name	Schmallenberg virus [TAX:1133363]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus schmallenbergense
RefSeq	NC_043582 Schmallenberg virus isolate F6 segment S, complete sequence. NC_043583 Schmallenberg virus isolate F6 segment L, complete sequence. NC_043584 Schmallenberg virus isolate F6 segment M, complete sequence.
Evidence	RefSeq
Evidence	UniProt
Evidence	Literature
Reference	PMID: 23996608
Authors	Hulst M, Kortekaas J, Hakze-van der Honing R, Vastenhouw S, Cornellissen J, van Maanen K, Bossers A, Harders F, Stockhofe N, van der Poel W
Title	Genetic characterization of an atypical Schmallenberg virus isolated from the brain of a malformed lamb.
Journal	Virus Genes. 2013 Dec;47(3):505-14.
DBLINKS	KEGG BRITE: NC_043582 NC_043583 NC_043584 ICTV: 202300126 ViralZone: genus, family

Scientific Name	Shamonda virus [TAX:159150]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus schmallenbergense
RefSeq	NC_018463 Shamonda virus RdRp gene for RNA-dependent RNA polymerase, segment L, genomic RNA, isolate Ib An 5550. NC_018464 Shamonda virus N and NSs genes, segment S, genomic RNA, isolate Ib An 5550. NC_018467 Shamonda virus Gn-Gc-NSm gene for M polyprotein, segment M, genomic RNA, isolate Ib An 5550.
Evidence	Literature
Reference	PMID: 15503217
Authors	Yanase T, Maeda K, Kato T, Nyuta S, Kamata H, Yamakawa M, Tsuda T
Title	The resurgence of Shamonda virus, an African Simbu group virus of the genus Orthobunyavirus, in Japan.
Journal	Arch Virol. 2005 Feb;150(2):361-9.
Comment	Vector: Culicoides spp.
Evidence	Literature
Reference	PMID: 22588368
Authors	Yanase T, Kato T, Aizawa M, Shuto Y, Shirafuji H, Yamakawa M, Tsuda T
Title	Genetic reassortment between Sathuperi and Shamonda viruses of the genus Orthobunyavirus in nature: implications for their genetic relationship to Schmallenberg virus.
Journal	Arch Virol. 2012 Aug;157(8):1611-6.
Comment	Vector: Culicoides spp.
Evidence	Literature
Reference	PMID: 23017842
Authors	Goller KV, Höper D, Schirrmeier H, Mettenleiter TC, Beer M
Title	Schmallenberg virus as possible ancestor of Shamonda virus.
Journal	Emerg Infect Dis. 2012 Oct;18(10):1644-6.
Comment	Vector: Culicoides spp.
DBLINKS	KEGG BRITE: NC_018463 NC_018464 NC_018467 ICTV: 202300126 ViralZone: genus, family

Scientific Name	Snowshoe hare virus [TAX:11580]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus khatangaense
RefSeq	NC_055196 Snowshoe hare virus L polyprotein (L) gene, complete cds. NC_055197 Snowshoe hare virus segment M G1/G2 membrane polyprotein gene, complete cds. NC_055198 Snowshoe hare virus segment small, complete sequence.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_055196 NC_055197 NC_055198 ICTV: 202306371 ViralZone: genus, family

Scientific Name	Venezuelan equine encephalitis virus [TAX:11036]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus
RefSeq	NC_001449 Venezuelan equine encephalitis virus, complete genome. NC_075022 Venezuelan equine encephalitis virus, complete genome.
KEGG DISEASE	H01547 Venezuelan equine encephalitis
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001449 NC_075022 KEGG GENOME: T40028 ICTV: 202305111 ViralZone: family, genus

Scientific Name	Vesicular stomatitis Alagoas virus [TAX:198833]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Vesiculovirus; Vesiculovirus alagoas
RefSeq	NC_025353 Vesicular stomatitis Alagoas virus Indiana 3, complete genome.
Evidence	Literature
Reference	PMID: 18512001
Authors	Pauszek SJ, Allende R, Rodriguez LL
Title	Characterization of the full-length genomic sequences of vesicular stomatitis Cocal and Alagoas viruses.
Journal	Arch Virol. 2008;153(7):1353-7.
DBLINKS	KEGG BRITE: NC_025353 ICTV: 202301789 ViralZone: genus, family

Scientific Name	Vesicular stomatitis Indiana virus [TAX:11277]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Vesiculovirus; Vesiculovirus indiana
RefSeq	NC_001560 Vesicular stomatitis Indiana virus, complete genome. NC_038236 Vesicular stomatitis Indiana virus strain 98COE, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001560 NC_038236 ICTV: 202301794 ViralZone: genus, family

Scientific Name	Vesicular stomatitis New Jersey virus [TAX:11280]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Vesiculovirus; Vesiculovirus newjersey
RefSeq	NC_024473 Vesicular stomatitis New Jersey virus isolate NJ1184HDB, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 22825698
Authors	Pauszek SJ, Rodriguez LL
Title	Full-length genome analysis of vesicular stomatitis New Jersey virus strains representing the phylogenetic and geographic diversity of the virus.
Journal	Arch Virol. 2012 Nov;157(11):2247-51.
DBLINKS	KEGG BRITE: NC_024473 ICTV: 202301800 ViralZone: genus, family

Scientific Name	Xipapillomavirus 1 [TAX:10561]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Xipapillomavirus
RefSeq	NC_004197 Bovine papillomavirus 3, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_004197 ICTV: 202304133 ViralZone: genus, family