KEGG   Ruminiclostridium cellulolyticum: Ccel_1413
Entry
Ccel_1413         CDS       T00835                                 
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
cce  Ruminiclostridium cellulolyticum
Pathway
cce03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cce00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Ccel_1413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cce03400]
    Ccel_1413
DNA repair and recombination proteins [BR:cce03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Ccel_1413
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Ccel_1413
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 DUF87 TrwB_AAD_bind AAA_22 SWI2_SNF2 Kinesin FlaG AAA_7 Microtub_bd
Other DBs
NCBI-ProteinID: ACL75767
UniProt: B8I1G9
Position
1715954..1717936
AA seq 660 aa
MNFMNKFEVISEYKPMGDQPKAIAKLSKGILEGQKHQTLLGVTGSGKTYTMAKVIEQVQK
PTLVIAHNKTLAAQLCSEFKEFFPNNVVEYFVSYYDYYQPEAYIPSTDTYIEKDSSINEE
IDKLRHSATAALFERRDVIIVASVSCIYGLGDPEDYTDLMLSLRVGMQKDRDDVIKKLVD
IQYERNEIDFRRGRFRVRGDVLEIFPANSSEKVLRVEFFGDEIERITEVDYLTGEIVGTR
DHIAVFPASHYATSRHKMDRAMVTIEKELEERLEQFKMEDKLLEAQRLEQRTRYDLEMMS
EIGFCQGIENYSRHISGREAGSSPYTLMDYFPDDYLLVIDESHVTVSQVGAMYNGDRSRK
ESLVEYGFRLPSAFDNRPLKFHEFEERVNQVVYVSATPANYEREHSTQIVEQIIRPTGLI
DPEITVKPVKGQIDDLIGEINMRAEKHQRVLVTTLTKKMAEDLTDYMKELDIRVKYLHSD
VVTFERMEIIRDLRLGVFDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSETSLIQTI
GRAARNSEGMVIMYADNITGSMQRAISETNRRRQIQMDYNEKHGIVPTTIQKSVRNVLEA
TKVAEEEDKYYTEKKATQMSEQELENLIAKLQKEMKQAAADLQFERAAELRDKIELLRGK
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgaattttatgaacaaatttgaagtaatttcagagtacaagcccatgggcgaccaaccc
aaagctatagcaaaactcagcaaaggcatacttgaagggcaaaaacatcagacacttctg
ggagtaacaggttcgggaaaaacatataccatggcgaaggttatagagcaagtacagaag
ccaacacttgtgattgcacataataagactcttgcggcacagctttgcagtgaattcaag
gaattttttccaaataatgttgttgaatattttgtgagttattatgactactatcagcct
gaagcatatataccttcaactgatacgtatatagaaaaagattcttctataaacgaagaa
attgataaattgagacactctgccacagctgctttgtttgaaagaagagacgtaataatt
gttgccagtgtttcctgtatttatggtttgggtgacccggaggattacaccgaccttatg
ctgtcccttagagtaggtatgcagaaggatagggatgatgtaatcaaaaagcttgtagat
atacagtatgaaagaaatgagatagatttcagaagaggaaggttcagggtcagaggagat
gttctggagatttttcctgccaacagttccgaaaaggttttaagagtagaattttttggt
gatgaaatagaaagaattacggaagtagactacctaactggtgagatagtcggaaccagg
gaccatatagctgtattcccggcttcccactatgctacaagcaggcataaaatggaccgt
gctatggtaactattgaaaaagagctggaagaaagactggagcagtttaaaatggaagac
aagctgctggaggctcaaagactggagcagagaaccagatacgacttggaaatgatgtct
gaaattggtttttgtcagggaatagagaactactcccgccatataagcggtcgtgaagcc
ggaagttccccatataccctgatggattattttccagatgattatctccttgttattgat
gaatctcatgtaacagtatcacaggtaggtgctatgtacaacggtgaccgatccagaaag
gagtcacttgtagaatatggttttagactgccgtcagcttttgacaacagacctcttaaa
ttccatgagtttgaagaacgggtgaatcaggtagtatatgtaagtgcaacgcctgctaat
tatgaaagggaacattctactcagatagttgaacagattatcaggcctacaggcttaatt
gatcccgagattacagtaaaacctgtaaaaggtcagattgatgatttaatcggtgaaatt
aatatgagagctgaaaaacatcaaagagtccttgtaacaactcttactaagaagatggca
gaagatttgacggactatatgaaggaacttgatataagggtaaagtaccttcattccgac
gttgttacttttgagagaatggagataataagagatttaaggttgggtgtttttgatgtg
ctaatcggaataaatctgttaagagaaggactcgacattcccgaggtctcgctggtagcc
atacttgatgcggataaggaaggttttctgcgttctgaaacatcactgatacagactata
ggaagagctgccagaaattctgaaggtatggttataatgtatgcagacaacattacaggc
tcaatgcagagagctataagtgagacaaacagaaggcgtcagattcagatggattacaat
gagaagcacggaattgttccgactactattcaaaaatccgtcagaaatgttctggaagcc
acgaaggttgctgaagaagaggacaagtattataccgaaaagaaagcaactcaaatgtct
gaacaggaacttgaaaatcttatagcaaaactgcagaaggaaatgaagcaggcggcggca
gatttacaatttgagcgtgcagcagaattaagagataagatagaattactcagggggaag
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (23)   

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