KEGG   Parvularcula bermudensis: PB2503_03607
Entry
PB2503_03607      CDS       T01298                                 
Name
(GenBank) conjugal transfer protein traB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
pbr  Parvularcula bermudensis
Pathway
pbr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pbr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PB2503_03607
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbr02044]
    PB2503_03607
Enzymes [BR:pbr01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     PB2503_03607
Secretion system [BR:pbr02044]
 Type IV secretion system
  Trb secretion system protein
   PB2503_03607
SSDB
Motif
Pfam: T2SSE TrwB_AAD_bind nSTAND3 ResIII Zeta_toxin AAA_16 ABC_tran FtsK_SpoIIIE DEAD AAA_10 RsgA_GTPase MobB IstB_IS21 DUF87 AAA_22 CbiA AAA_29 AAA_23 AAA_30 AAA_28 AAA_19 Sigma54_activat AAA_18 AAA_33 ATPase AAA_7 NACHT Mg_chelatase cobW MMR_HSR1 Septin AAA_25 AAA GTP_EFTU P-loop_TraG Sigma54_activ_2 DUF1107 DUF815 TsaE Pox_A32 PduV-EutP CLP1_P ABC_ATPase ORC-CDC6-like SRP54 APS_kinase Dynamin_N AAA_24 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: ADM08796
UniProt: E0TDP1
Position
complement(653148..654146)
AA seq 332 aa
MPIPDARSQTYLRTETMLKTAMGPAVVEALDDPAIVEVMVNPDGKIWIDAHGDGRMETGT
VMPAAEAERVIRVVGSHIGQEVDRLHPIVSAELPGGGERFEGVIPPVTTAPCFSIRKPAA
RVFTLDDYVETGVTSAEDADALRAAVRDAMNILIVGGTGSGKTTLANALLAEVALSGDRV
VILEDTRELQCEARDKVNLRTQAGAVAMADLVRSTLRLRPDRIIVGEVRGGEALDMLKAW
NTGHPGGIATIHANSAGGGLQRLEQLVSEVTAQTPHALIAEAIDLIVFIAGRGPERRIRT
ISRVLGREAGDYRLEPFSSPVSQIVKLKGSSS
NT seq 999 nt   +upstreamnt  +downstreamnt
atgccgatacctgacgcgcgctcccaaacctaccttcgaaccgagaccatgctgaaaacc
gccatgggaccggctgtcgtcgaggcgctggatgatcccgccattgttgaagtgatggtc
aatcccgatggcaagatctggatcgacgcccatggcgacggccgcatggagaccgggacc
gtcatgcccgctgcggaagccgaacgggtcattcgcgtcgtcggcagtcatattggtcag
gaagtggacaggctccaccccattgtcagcgccgagctgccgggcgggggagaacgcttt
gagggcgtcatcccgccagtgaccacggcgccgtgcttttccattcggaagcccgccgcc
cgcgtcttcacgctcgacgattatgtcgagactggcgtgacaagtgcagaagacgccgac
gcgctcagggccgccgtccgagacgccatgaacatcctgattgtcggcggcacagggtcg
ggcaaaaccaccctcgcaaacgccttgcttgcagaggtcgcattgagcggcgatcgcgtg
gtgatcctcgaagacacgcgcgagctgcaatgcgaggccagggacaaggtcaatctgcgg
actcaggccggcgctgtcgccatggccgatctcgttcgctcgacgcttcggctgcgaccc
gaccggattatcgtcggcgaagttcgcggcggcgaagccctcgacatgctcaaagcctgg
aacacgggccatccgggtggaatcgccaccattcacgccaactccgctggcggcggtctc
caacggcttgaacagcttgtgtcggaagtgacggcgcagactccgcacgccctgatcgcc
gaagccatcgatctcatcgtgttcatcgcagggcgcggaccggaacgccggatacggaca
atcagccgggtgcttggccgcgaggccggcgactaccgcctggagccattttcctcaccc
gtcagccaaatcgtcaaactgaaaggaagctcatcatga

  All links  
Gene (17)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (49)   
   Pfam (49)   
All databases (67)   

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