KEGG   Pan paniscus (bonobo): 100983960
Entry
100983960         CDS       T02283                                 
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
pps  Pan paniscus (bonobo)
Pathway
pps04010  MAPK signaling pathway
pps04064  NF-kappa B signaling pathway
pps04120  Ubiquitin mediated proteolysis
pps04140  Autophagy - animal
pps04144  Endocytosis
pps04380  Osteoclast differentiation
pps04620  Toll-like receptor signaling pathway
pps04621  NOD-like receptor signaling pathway
pps04622  RIG-I-like receptor signaling pathway
pps04657  IL-17 signaling pathway
pps04722  Neurotrophin signaling pathway
pps04936  Alcoholic liver disease
pps05132  Salmonella infection
pps05133  Pertussis
pps05135  Yersinia infection
pps05140  Leishmaniasis
pps05142  Chagas disease
pps05145  Toxoplasmosis
pps05152  Tuberculosis
pps05160  Hepatitis C
pps05161  Hepatitis B
pps05162  Measles
pps05168  Herpes simplex virus 1 infection
pps05169  Epstein-Barr virus infection
pps05170  Human immunodeficiency virus 1 infection
pps05171  Coronavirus disease - COVID-19
pps05200  Pathways in cancer
pps05222  Small cell lung cancer
pps05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
pps05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:pps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100983960 (TRAF6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100983960 (TRAF6)
   04064 NF-kappa B signaling pathway
    100983960 (TRAF6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100983960 (TRAF6)
   04140 Autophagy - animal
    100983960 (TRAF6)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100983960 (TRAF6)
   04621 NOD-like receptor signaling pathway
    100983960 (TRAF6)
   04622 RIG-I-like receptor signaling pathway
    100983960 (TRAF6)
   04657 IL-17 signaling pathway
    100983960 (TRAF6)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    100983960 (TRAF6)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    100983960 (TRAF6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100983960 (TRAF6)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    100983960 (TRAF6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100983960 (TRAF6)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100983960 (TRAF6)
   05161 Hepatitis B
    100983960 (TRAF6)
   05160 Hepatitis C
    100983960 (TRAF6)
   05171 Coronavirus disease - COVID-19
    100983960 (TRAF6)
   05162 Measles
    100983960 (TRAF6)
   05168 Herpes simplex virus 1 infection
    100983960 (TRAF6)
   05169 Epstein-Barr virus infection
    100983960 (TRAF6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100983960 (TRAF6)
   05135 Yersinia infection
    100983960 (TRAF6)
   05133 Pertussis
    100983960 (TRAF6)
   05152 Tuberculosis
    100983960 (TRAF6)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    100983960 (TRAF6)
   05140 Leishmaniasis
    100983960 (TRAF6)
   05142 Chagas disease
    100983960 (TRAF6)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    100983960 (TRAF6)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    100983960 (TRAF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pps04131]
    100983960 (TRAF6)
   04121 Ubiquitin system [BR:pps04121]
    100983960 (TRAF6)
Enzymes [BR:pps01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100983960 (TRAF6)
Membrane trafficking [BR:pps04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    100983960 (TRAF6)
Ubiquitin system [BR:pps04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    100983960 (TRAF6)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX Sina_ZnF TRAF3_RING RING_XB3-XBAT31 zf-RING_11 U-box Spc29 DM DUF16 DUF7310 AAA_13 EzrA PspA_IM30 DUF3450 Dynactin_p22 Filament Myosin_tail_1 DUF6271 FliJ UPF0242
Other DBs
NCBI-GeneID: 100983960
NCBI-ProteinID: XP_003830405
Ensembl: ENSPPAG00000042961
UniProt: A0A2R9CI00
Position
9:complement(38702879..38731477)
AA seq 522 aa
MSLLNCENSCGSSQSESDCCVAMASSCSAATKDDSVGGTASTGNLSSSFMEEIQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKFHINIHILK
DCPRRQVSCDNCAASMAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAPI
PCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSLIPDSGYISEVRNFQETIH
QLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNF
GMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDS
HLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLE
ALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDAGV
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgagtctgctaaactgtgaaaacagctgtggatccagccagtctgaaagtgactgctgt
gtggccatggccagctcctgtagcgctgcaacaaaagatgatagtgtgggtggaactgcc
agcacagggaacctctccagctcatttatggaggagatccagggatatgatgtagagttt
gacccacccctggaaagcaagtatgaatgccccatctgcttgatggcattacgagaagca
gtgcaaacgccatgcggccataggttctgcaaagcctgcatcataaaatcaataagggat
gcaggtcacaaatgtccagttgacaatgaaatactgctggaaaatcaactatttccagac
aattttgcaaaacgtgagattctttctctgatggtgaaatgtccaaatgaaggttgtttg
cacaagatggaactgagacatcttgaggatcatcaagcacattgtgagtttgctcttatg
gattgtccccaatgccagcgtcccttccaaaaattccatattaatattcacattctgaag
gattgtccaaggagacaggtttcttgtgacaactgtgctgcatcaatggcatttgaagat
aaagagatccatgaccagaactgtcctttggcaaatgtcatctgtgaatactgcaatact
atactcatcagagaacagatgcctaatcattatgatctagactgccctacagccccaatt
ccatgcacattcagtacttttggttgccatgaaaagatgcagaggaatcacttggcacgc
cacctacaagagaacacccagtcacacatgagaatgttggcccaggctgttcatagtttg
agccttatacctgactctgggtatatctcagaggtccggaatttccaggaaactattcac
cagttagagggtcgccttgtaagacaagaccatcaaatccgggagctgactgctaaaatg
gaaactcagagtatgtatgtaagtgagctcaaacgaaccattcgaacccttgaggacaaa
gttgctgaaatcgaagcacagcagtgcaatggaatttatatttggaagattggcaacttt
ggaatgcatttgaaatgtcaagaagaggagaaacctgttgtgattcatagccctggattc
tacactggcaaacccgggtacaaactgtgcatgcgcttgcaccttcagttaccaactgct
cagcgctgtgcaaactatatatccctttttgtccacacaatgcaaggagaatatgacagc
cacctcccttggcccttccagggtacaatacgccttacaattcttgatcagtctgaagca
cctgtaaggcaaaaccacgaagagataatggatgccaaaccagagctgcttgctttccag
cgacccacaatcccacggaacccaaaaggttttggctatgtaacttttatgcatctggaa
gccctaagacaaagaactttcattaaggatgacacattattagtgcgctgtgaggtctcc
acccgctttgacatgggtagccttcggagggagggttttcagccacgaagtactgatgca
ggggtatag

  All links  
Gene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (32)   
   Pfam (32)   
All databases (39)   

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