KEGG Orthology (KO) - Saccharomyces cerevisiae (budding yeast)

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
     03060 Protein export [PATH:sce03060]
     04141 Protein processing in endoplasmic reticulum [PATH:sce04141]
       YLR378C SEC61; translocon subunit SEC61
       YBR283C SSH1; Ssh1p
       YER087C-B SBH1; Arf family guanine nucleotide exchange factor SBH1
       YER019C-A SBH2; Arf family guanine nucleotide exchange factor SBH2
       YDR086C SSS1; translocon subunit SSS1
       YPL094C SEC62; Sec63 complex subunit SEC62
       YOR254C SEC63; protein-transporting protein SEC63
       YJL002C OST1; dolichyl-diphosphooligosaccharide--protein glycotransferase subunit OST1
       YMR149W SWP1; dolichyl-diphosphooligosaccharide-protein glycotransferase
       YOR103C OST2; dolichyl-diphosphooligosaccharide-protein glycotransferase
       YML019W OST6; dolichyl-diphosphooligosaccharide--protein glycotransferase
       YOR085W OST3; dolichyl-diphosphooligosaccharide--protein glycotransferase OST3
       YEL002C WBP1; dolichyl-diphosphooligosaccharide-protein glycotransferase
       YDL232W OST4; olichyl-diphosphooligosaccharide--protein glycotransferase OST4
       YGL226C-A OST5; dolichyl-diphosphooligosaccharide--protein glycotransferase subunit
       YGL022W STT3; dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3
       YGL027C CWH41; mannosyl-oligosaccharide glucosidase
       YOL031C SIL1; Sil1p
       YKL073W LHS1; Hsp70 family chaperone LHS1
       YJL034W KAR2; Hsp70 family ATPase KAR2
       YJL073W JEM1; Jem1p
       YMR214W SCJ1; Scj1p
       YBR229C ROT2; glucan 1,3-alpha-glucosidase ROT2
       YDR221W GTB1; Gtb1p
       YAL058W CNE1; calnexin
       YLR057W MNL2; putative mannosidase MNL2
       YJR131W MNS1; mannosyl-oligosaccharide 1,2-alpha-mannosidase
       YLR080W EMP46; Emp46p
       YFL048C EMP47; Emp47p
       YCR067C SED4; GTPase-activating protein SED4
       YNR026C SEC12; Sar family guanine nucleotide exchange factor SEC12
       YPL218W SAR1; Arf family GTPase SAR1
       YLR208W SEC13; GTPase-activating protein SEC13
       YDL195W SEC31; Sec31p
       YPR181C SEC23; GTPase-activating protein SEC23
       YIL109C SEC24; COPII subunit SEC24
       YHR098C SFB3; Sfb3p
       YNL049C SFB2; COPII subunit SFB2
       YOR336W KRE5; Kre5p
       YCL043C PDI1; protein disulfide isomerase PDI1
       YDR518W EUG1; protein disulfide isomerase EUG1
       YOR288C MPD1; protein disulfide isomerase MPD1
       YIL005W EPS1; protein disulfide isomerase EPS1
       YML130C ERO1; ER oxidoreductin
       YDR057W YOS9; Yos9p
       YDL072C YET3; Yet3p
       YBR201W DER1; derlin
       YDR411C DFM1; Dfm1p
       YBR273C UBX7; Ubx7p
       YBL058W SHP1; protein phosphatase regulator SHP1
       YML013W UBX2; Ubx2p
       YDL126C CDC48; AAA family ATPase CDC48
       YBR170C NPL4; nuclear protein localization protein 4
       YGR048W UFD1; polyubiquitin-binding protein UFD1
       YLL024C SSA2; Hsp70 family chaperone SSA2
       YAL005C SSA1; Hsp70 family ATPase SSA1
       YER103W SSA4; Hsp70 family chaperone SSA4
       YBL075C SSA3; Hsp70 family ATPase SSA3
       YNL209W SSB2; Hsp70 family ATPase SSB2
       YDL229W SSB1; Hsp70 family ATPase SSB1
       YNL064C YDJ1; type I HSP40 co-chaperone YDJ1
       YLR090W XDJ1; Xdj1p
       YNL077W APJ1; Apj1p
       YMR161W HLJ1; type I HSP40 co-chaperone HLJ1
       YPL240C HSP82; Hsp90 family chaperone HSP82
       YMR186W HSC82; Hsp90 family chaperone HSC82
       YBR169C SSE2; adenyl-nucleotide exchange factor SSE2
       YPL106C SSE1; adenyl-nucleotide exchange factor SSE1
       YBR101C FES1; Hsp70 nucleotide exchange factor FES1
       YIL016W SNL1; Snl1p
       YBR072W HSP26; chaperone protein HSP26
       YDR171W HSP42; heat shock protein HSP42
       YFL044C OTU1; ubiquitin-specific protease OTU1
       YKL213C DOA1; Doa1p
       YEL037C RAD23; Rad23p
       YMR276W DSK2; ubiquitin domain-containing protein DSK2
       YPL096W PNG1; peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase
       YDL190C UFD2; ubiquitin-ubiquitin ligase UFD2
       YJR007W SUI2; translation initiation factor eIF2 subunit alpha
       YHR079C IRE1; bifunctional endoribonuclease/protein kinase IRE1
       YIL030C SSM4; E3 ubiquitin-protein ligase SSM4
       YER100W UBC6; E2 ubiquitin-conjugating protein UBC6
       YMR022W UBC7; E2 ubiquitin-conjugating protein UBC7
       YMR264W CUE1; Cue1p
       YLR207W HRD3; ubiquitin ligase complex subunit HRD3
       YOL013C HRD1; E3 ubiquitin-protein ligase HRD1
       YML029W USA1; Usa1p
       YDR059C UBC5; E2 ubiquitin-conjugating protein UBC5
       YBR082C UBC4; E2 ubiquitin-conjugating protein UBC4
       YOL133W HRT1; SCF ubiquitin ligase complex subunit HRT1
       YDL132W CDC53; cullin CDC53
       YDR328C SKP1; SCF ubiquitin ligase subunit SKP1
K10956 SEC61A; protein transport protein SEC61 subunit alpha
K10956 SEC61A; protein transport protein SEC61 subunit alpha
K09481 SEC61B; protein transport protein SEC61 subunit beta
K09481 SEC61B; protein transport protein SEC61 subunit beta
K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
K12275 SEC62; translocation protein SEC62
K09540 SEC63; translocation protein SEC63
K12666 RPN1; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
K12667 RPN2; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
K12668 DAD1; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit DAD1/OST2
K12669 OST3_6; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 3/6
K12669 OST3_6; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 3/6
K12670 DDOST; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit DDOST/WBP1
K00730 OST4; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 4
K12691 OST5; dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 5
K07151 STT3; dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:2.4.99.18]
K01228 MOGS; mannosyl-oligosaccharide glucosidase [EC:3.2.1.106]
K14001 SIL1; nucleotide exchange factor SIL1
K09486 HYOU1; hypoxia up-regulated 1
K09490 HSPA5; endoplasmic reticulum chaperone BiP [EC:3.6.4.10]
K09523 DNAJC3; DnaJ homolog subfamily C member 3
K14002 SCJ1; DnaJ-related protein SCJ1
K05546 GANAB; mannosyl-oligosaccharide alpha-1,3-glucosidase [EC:3.2.1.207]
K08288 PRKCSH; protein kinase C substrate 80K-H
K08054 CANX; calnexin
K01230 MAN1A_C; mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]
K23741 MAN1B; endoplasmic reticulum Man9GlcNAc2 1,2-alpha-mannosidase [EC:3.2.1.209]
K10080 LMAN1; lectin, mannose-binding 1
K10080 LMAN1; lectin, mannose-binding 1
K14003 PREB; prolactin regulatory element-binding protein
K14003 PREB; prolactin regulatory element-binding protein
K07953 SAR1; GTP-binding protein SAR1 [EC:3.6.5.-]
K14004 SEC13; protein transport protein SEC13
K14005 SEC31; protein transport protein SEC31
K14006 SEC23; protein transport protein SEC23
K14007 SEC24; protein transport protein SEC24
K14007 SEC24; protein transport protein SEC24
K14007 SEC24; protein transport protein SEC24
K11718 HUGT; UDP-glucose:glycoprotein glucosyltransferase [EC:2.4.1.-]
K09580 PDIA1; protein disulfide-isomerase A1 [EC:5.3.4.1]
K09580 PDIA1; protein disulfide-isomerase A1 [EC:5.3.4.1]
K09584 PDIA6; protein disulfide-isomerase A6 [EC:5.3.4.1]
K13996 EPS1; protein disulfide-isomerase [EC:5.3.4.1]
K10976 ERO1LB; ERO1-like protein beta [EC:1.8.4.-]
K10088 OS9; protein OS-9
K14009 BCAP31; B-cell receptor-associated protein 31
K13989 DERL2_3; Derlin-2/3
K13989 DERL2_3; Derlin-2/3
K24348 UBXN1_4; UBX domain-containing protein 1/4
K14012 NSFL1C; UBX domain-containing protein 1
K14013 UBX2; UBX domain-containing protein 2
K13525 VCP; transitional endoplasmic reticulum ATPase
K14015 NPLOC4; nuclear protein localization protein 4
K14016 UFD1; ubiquitin fusion degradation protein 1
K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
K09503 DNAJA2; DnaJ homolog subfamily A member 2
K09503 DNAJA2; DnaJ homolog subfamily A member 2
K09503 DNAJA2; DnaJ homolog subfamily A member 2
K09518 DNAJB12; DnaJ homolog subfamily B member 12
K04079 HSP90A; molecular chaperone HtpG
K04079 HSP90A; molecular chaperone HtpG
K09485 HSP110; heat shock protein 110kDa
K09485 HSP110; heat shock protein 110kDa
K09562 HSPBP1; hsp70-interacting protein
K14017 SNL1; HSP70 co-chaperone SNL1
K13993 HSP20; HSP20 family protein
K13993 HSP20; HSP20 family protein
K13719 OTU1; ubiquitin thioesterase OTU1 [EC:3.1.2.-]
K14018 PLAA; phospholipase A-2-activating protein
K10839 RAD23; UV excision repair protein RAD23
K04523 UBQLN; ubiquilin
K01456 E3.5.1.52; peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase [EC:3.5.1.52]
K10597 UBE4B; ubiquitin conjugation factor E4 B [EC:2.3.2.27]
K03237 EIF2S1; translation initiation factor 2 subunit 1
K08852 ERN1; serine/threonine-protein kinase/endoribonuclease IRE1 [EC:2.7.11.1 3.1.26.-]
K10661 MARCH6; E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27]
K04554 UBE2J2; ubiquitin-conjugating enzyme E2 J2 [EC:2.3.2.23]
K04555 UBE2G2; ubiquitin-conjugating enzyme E2 G2 [EC:2.3.2.23]
K14022 CUE1; coupling of ubiquitin conjugation to ER degradation protein 1
K14023 HRD3; ERAD-associated E3 ubiquitin-protein ligase component HRD3
K10601 SYVN1; E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
K14024 USA1; U1 SNP1-associating protein 1
K06689 UBE2D; ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]
K06689 UBE2D; ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]
K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
K03347 CUL1; cullin 1
K03094 SKP1; S-phase kinase-associated protein 1
     04130 SNARE interactions in vesicular transport [PATH:sce04130]
     04120 Ubiquitin mediated proteolysis [PATH:sce04120]
       YLL039C UBI4; ubiquitin
       YIL148W RPL40A; ubiquitin-ribosomal 60S subunit protein L40A fusion protein
       YKR094C RPL40B; ubiquitin-ribosomal 60S subunit protein L40B fusion protein
       YLR167W RPS31; ubiquitin-ribosomal 40S subunit protein S31 fusion protein
       YKL210W UBA1; E1 ubiquitin-activating protein UBA1
       YPR180W AOS1; E1 ubiquitin-activating protein AOS1
       YDR390C UBA2; E1 ubiquitin-activating protein UBA2
       YPR066W UBA3; NEDD8-activating protein UBA3
       YGL058W RAD6; E2 ubiquitin-conjugating protein RAD6
       YOR339C UBC11; putative E2 ubiquitin-protein ligase UBC11
       YDR059C UBC5; E2 ubiquitin-conjugating protein UBC5
       YBR082C UBC4; E2 ubiquitin-conjugating protein UBC4
       YMR022W UBC7; E2 ubiquitin-conjugating protein UBC7
       YEL012W UBC8; E2 ubiquitin-conjugating protein UBC8
       YDL064W UBC9; E2 SUMO-conjugating protein UBC9
       YER100W UBC6; E2 ubiquitin-conjugating protein UBC6
       YDR177W UBC1; E2 ubiquitin-conjugating protein UBC1
       YLR306W UBC12; NEDD8-conjugating protein UBC12
       YDR092W UBC13; E2 ubiquitin-conjugating protein UBC13
       YDR054C CDC34; SCF E2 ubiquitin-protein ligase catalytic subunit CDC34
       YGL141W HUL5; ubiquitin-ubiquitin ligase HUL5
       YKL010C UFD4; putative ubiquitin-protein ligase UFD4
       YER125W RSP5; NEDD4 family E3 ubiquitin-protein ligase
       YDR457W TOM1; E3 ubiquitin-protein ligase TOM1
       YDL190C UFD2; ubiquitin-ubiquitin ligase UFD2
       YLL036C PRP19; E3 ubiquitin-protein ligase PRP19
       YDR409W SIZ1; SUMO ligase SIZ1
       YOL013C HRD1; E3 ubiquitin-protein ligase HRD1
       YOL133W HRT1; SCF ubiquitin ligase complex subunit HRT1
       YDL132W CDC53; cullin CDC53
       YDR328C SKP1; SCF ubiquitin ligase subunit SKP1
       YFL009W CDC4; SCF ubiquitin ligase complex subunit CDC4
       YIL046W MET30; ubiquitin-binding SDF ubiquitin ligase complex subunit MET30
       YJR090C GRR1; SCF ubiquitin ligase complex subunit GRR1
       YPL046C ELC1; elongin C
       YGR003W CUL3; cullin CUL3
       YDR030C RAD28; Rad28p
       YDL008W APC11; anaphase promoting complex subunit 11
       YLR127C APC2; anaphase promoting complex subunit 2
       YGL116W CDC20; ubiquitin-protein transferase activating protein CDC20
       YGL003C CDH1; Cdh1p
       YNL172W APC1; anaphase promoting complex subunit 1
       YBL084C CDC27; anaphase promoting complex subunit CDC27
       YDR118W APC4; anaphase promoting complex subunit 4
       YOR249C APC5; anaphase promoting complex subunit 5
       YKL022C CDC16; anaphase promoting complex subunit CDC16
       YHR166C CDC23; anaphase promoting complex subunit CDC23
       YLR102C APC9; anaphase promoting complex subunit 9
       YGL240W DOC1; anaphase promoting complex subunit DOC1
       YFR036W CDC26; anaphase promoting complex subunit CDC26
       YDR260C SWM1; Swm1p
K08770 UBC; ubiquitin C
K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
K03178 UBE1; ubiquitin-activating enzyme E1 [EC:6.2.1.45]
K10684 UBLE1A; ubiquitin-like 1-activating enzyme E1 A [EC:6.2.1.45]
K10685 UBLE1B; ubiquitin-like 1-activating enzyme E1 B [EC:6.2.1.45]
K10686 UBA3; NEDD8-activating enzyme E1 [EC:6.2.1.64]
K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
K06688 UBE2C; ubiquitin-conjugating enzyme E2 C [EC:2.3.2.23]
K06689 UBE2D; ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]
K06689 UBE2D; ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]
K04555 UBE2G2; ubiquitin-conjugating enzyme E2 G2 [EC:2.3.2.23]
K10576 UBE2H; ubiquitin-conjugating enzyme E2 H [EC:2.3.2.23]
K10577 UBE2I; ubiquitin-conjugating enzyme E2 I
K04554 UBE2J2; ubiquitin-conjugating enzyme E2 J2 [EC:2.3.2.23]
K04649 UBE2K; ubiquitin-conjugating enzyme (huntingtin interacting protein 2) [EC:2.3.2.23]
K10579 UBE2M; ubiquitin-conjugating enzyme E2 M [EC:2.3.2.34]
K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
K02207 UBE2R; ubiquitin-conjugating enzyme E2 R [EC:2.3.2.23]
K10589 UBE3C; ubiquitin-protein ligase E3 C [EC:2.3.2.26]
K10590 TRIP12; E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]
K10591 NEDD4; E3 ubiquitin-protein ligase NEDD4 [EC:2.3.2.26]
K10592 HUWE1; E3 ubiquitin-protein ligase HUWE1 [EC:2.3.2.26]
K10597 UBE4B; ubiquitin conjugation factor E4 B [EC:2.3.2.27]
K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
K04706 PIAS1; E3 SUMO-protein ligase PIAS1 [EC:2.3.2.-]
K10601 SYVN1; E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
K03347 CUL1; cullin 1
K03094 SKP1; S-phase kinase-associated protein 1
K03361 CDC4; F-box and WD-40 domain protein CDC4
K10259 MET30; F-box and WD-40 domain protein MET30
K03360 GRR1; F-box and leucine-rich repeat protein GRR1
K03872 ELOC; elongin-C
K03869 CUL3; cullin 3
K10570 ERCC8; DNA excision repair protein ERCC-8
K03358 APC11; anaphase-promoting complex subunit 11
K03349 APC2; anaphase-promoting complex subunit 2
K03363 CDC20; cell division cycle 20, cofactor of APC complex
K03364 CDH1; cell division cycle 20-like protein 1, cofactor of APC complex
K03348 APC1; anaphase-promoting complex subunit 1
K03350 APC3; anaphase-promoting complex subunit 3
K03351 APC4; anaphase-promoting complex subunit 4
K03352 APC5; anaphase-promoting complex subunit 5
K03353 APC6; anaphase-promoting complex subunit 6
K03355 APC8; anaphase-promoting complex subunit 8
K03356 APC9; anaphase-promoting complex subunit 9
K03357 APC10; anaphase-promoting complex subunit 10
K03359 APC12; anaphase-promoting complex subunit 12
K12416 SWM1; anaphase-promoting complex subunit SWM1
     04122 Sulfur relay system [PATH:sce04122]
     03050 Proteasome [PATH:sce03050]
     03018 RNA degradation [PATH:sce03018]
 
   09124 Replication and repair
     03030 DNA replication [PATH:sce03030]
     03410 Base excision repair [PATH:sce03410]
     03420 Nucleotide excision repair [PATH:sce03420]
       YJL092W SRS2; DNA helicase SRS2
       YOL133W HRT1; SCF ubiquitin ligase complex subunit HRT1
       YER162C RAD4; Rad4p
       YEL037C RAD23; Rad23p
       YDR030C RAD28; Rad28p
       YJR035W RAD26; DNA-dependent ATPase RAD26
       YDL140C RPO21; DNA-directed RNA polymerase II core subunit RPO21
       YOR151C RPB2; DNA-directed RNA polymerase II core subunit RPB2
       YIL021W RPB3; DNA-directed RNA polymerase II core subunit RPB3
       YJL140W RPB4; DNA-directed RNA polymerase II subunit RPB4
       YBR154C RPB5; DNA-directed RNA polymerase core subunit RPB5
       YPR187W RPO26; DNA-directed RNA polymerase core subunit RPO26
       YDR404C RPB7; DNA-directed RNA polymerase II subunit RPB7
       YOR224C RPB8; DNA-directed RNA polymerase core subunit RPB8
       YGL070C RPB9; DNA-directed RNA polymerase II core subunit RPB9
       YOR210W RPB10; DNA-directed RNA polymerase core subunit RPB10
       YHR143W-A RPC10; DNA-directed RNA polymerase core subunit RPC10
       YOL005C RPB11; DNA-directed RNA polymerase II core subunit RPB11
       YDL108W KIN28; TFIIH complex serine/threonine-protein kinase subunit KIN28
       YDR460W TFB3; TFIIH/NER complex subunit TFB3
       YPR025C CCL1; TFIIH complex kinase subunit CCL1
       YIL143C SSL2; TFIIH/NER complex ATPase/helicase subunit SSL2
       YER171W RAD3; TFIIH/NER complex ATP-dependent 5'-3' DNA helicase subunit RAD3
       YDR079C-A TFB5; TFIIH complex subunit TFB5
       YDR311W TFB1; TFIIH/NER complex subunit TFB1
       YLR005W SSL1; TFIIH/NER complex subunit SSL1
       YPR056W TFB4; TFIIH/NER complex subunit TFB4
       YPL122C TFB2; TFIIH/NER complex subunit TFB2
       YGR258C RAD2; ssDNA endodeoxyribonuclease RAD2
       YMR201C RAD14; DNA repair protein RAD14
       YAR007C RFA1; replication factor A subunit protein RFA1
       YNL312W RFA2; Rfa2p
       YPL022W RAD1; ssDNA endodeoxyribonuclease RAD1
       YML095C RAD10; DNA repair protein RAD10
       YDL102W POL3; DNA-directed DNA polymerase delta POL3
       YJR006W POL31; DNA-directed DNA polymerase delta subunit POL31
       YJR043C POL32; DNA polymerase delta subunit POL32
       YNL262W POL2; DNA polymerase epsilon catalytic subunit
       YPR175W DPB2; DNA polymerase epsilon noncatalytic subunit
       YDR121W DPB4; DNA polymerase epsilon noncatalytic subunit
       YBR278W DPB3; DNA polymerase epsilon noncatalytic subunit
       YJL065C DLS1; Dls1p
       YBR088C POL30; proliferating cell nuclear antigen
       YOR217W RFC1; replication factor C subunit 1
       YJR068W RFC2; replication factor C subunit 2
       YOL094C RFC4; replication factor C subunit 4
       YNL290W RFC3; replication factor C subunit 3
       YBR087W RFC5; replication factor C subunit 5
       YDL164C CDC9; DNA ligase (ATP) CDC9
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
K10838 XPC; xeroderma pigmentosum group C-complementing protein
K10839 RAD23; UV excision repair protein RAD23
K10570 ERCC8; DNA excision repair protein ERCC-8
K10841 ERCC6; DNA excision repair protein ERCC-6
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
K10842 MNAT1; CDK-activating kinase assembly factor MAT1
K06634 CCNH; cyclin H
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
K10846 ERCC5; DNA excision repair protein ERCC-5
K10847 XPA; DNA-repair protein complementing XP-A cells
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10849 ERCC1; DNA excision repair protein ERCC-1
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03504 POLD3; DNA polymerase delta subunit 3
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
K04802 PCNA; proliferating cell nuclear antigen
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
     03430 Mismatch repair [PATH:sce03430]
     03440 Homologous recombination [PATH:sce03440]
     03450 Non-homologous end-joining [PATH:sce03450]
     03460 Fanconi anemia pathway
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
   09141 Transport and catabolism
 
   09143 Cell growth and death
     04110 Cell cycle
     04111 Cell cycle - yeast [PATH:sce04111]
       YAL040C CLN3; cyclin CLN3
       YBR160W CDC28; cyclin-dependent serine/threonine-protein kinase CDC28
       YER111C SWI4; SBF complex DNA-binding subunit SWI4
       YLR182W SWI6; transcriptional regulator SWI6
       YMR199W CLN1; cyclin CLN1
       YPL256C CLN2; cyclin CLN2
       YLR079W SIC1; cyclin-dependent protein serine/threonine kinase inhibiting protein SIC1
       YDL056W MBP1; transcription factor MBP1
       YGR109C CLB6; B-type cyclin CLB6
       YPR120C CLB5; B-type cyclin CLB5
       YJL194W CDC6; AAA family ATPase CDC6
       YML065W ORC1; origin recognition complex subunit 1
       YBR060C ORC2; origin recognition complex subunit 2
       YLL004W ORC3; origin recognition complex subunit 3
       YPR162C ORC4; origin recognition complex subunit 4
       YNL261W ORC5; origin recognition complex subunit 5
       YHR118C ORC6; origin recognition complex subunit 6
       YBL023C MCM2; MCM DNA helicase complex subunit MCM2
       YEL032W MCM3; MCM DNA helicase complex subunit MCM3
       YPR019W MCM4; MCM DNA helicase complex subunit MCM4
       YLR274W MCM5; MCM DNA helicase complex subunit MCM5
       YGL201C MCM6; MCM DNA helicase complex subunit MCM6
       YBR202W MCM7; mini-chromosome maintenance complex protein 7
       YJR046W TAH11; Tah11p
       YDL017W CDC7; serine/threonine protein kinase CDC7
       YDR052C DBF4; protein serine/threonine kinase activating protein DBF4
       YLR103C CDC45; DNA replication initiation factor CDC45
       YMR043W MCM1; transcription factor MCM1
       YML027W YOX1; Yox1p
       YDR451C YHP1; Yhp1p
       YOR083W WHI5; transcriptional repressor WHI5
       YBL016W FUS3; mitogen-activated serine/threonine-protein kinase FUS3
       YGR040W KSS1; mitogen-activated serine/threonine-protein kinase KSS1
       YJL157C FAR1; cyclin-dependent protein serine/threonine kinase inhibiting protein FAR1
       YNL172W APC1; anaphase promoting complex subunit 1
       YLR127C APC2; anaphase promoting complex subunit 2
       YBL084C CDC27; anaphase promoting complex subunit CDC27
       YDR118W APC4; anaphase promoting complex subunit 4
       YOR249C APC5; anaphase promoting complex subunit 5
       YKL022C CDC16; anaphase promoting complex subunit CDC16
       YHR166C CDC23; anaphase promoting complex subunit CDC23
       YLR102C APC9; anaphase promoting complex subunit 9
       YGL240W DOC1; anaphase promoting complex subunit DOC1
       YDL008W APC11; anaphase promoting complex subunit 11
       YFR036W CDC26; anaphase promoting complex subunit CDC26
       YDR260C SWM1; Swm1p
       YGL116W CDC20; ubiquitin-protein transferase activating protein CDC20
       YDR328C SKP1; SCF ubiquitin ligase subunit SKP1
       YDL132W CDC53; cullin CDC53
       YOL133W HRT1; SCF ubiquitin ligase complex subunit HRT1
       YJR090C GRR1; SCF ubiquitin ligase complex subunit GRR1
       YFL009W CDC4; SCF ubiquitin ligase complex subunit CDC4
       YNL289W PCL1; Pcl1p
       YDL127W PCL2; cyclin PCL2
       YDL179W PCL9; Pcl9p
       YPL031C PHO85; cyclin-dependent serine/threonine-protein kinase PHO85
       YGR233C PHO81; Pho81p
       YOL001W PHO80; Pho80p
       YFR034C PHO4; phosphate-sensing transcription factor PHO4
       YDL106C PHO2; Pho2p
       YAR071W PHO11; acid phosphatase PHO11
       YBR093C PHO5; acid phosphatase PHO5
       YHR215W PHO12; acid phosphatase PHO12
       YDL155W CLB3; B-type cyclin CLB3
       YLR210W CLB4; B-type cyclin CLB4
       YDL028C MPS1; serine/threonine/tyrosine protein kinase MPS1
       YGL086W MAD1; coiled-coil domain-containing protein MAD1
       YJL030W MAD2; spindle checkpoint protein MAD2
       YJL013C MAD3; Mad3p
       YGR188C BUB1; protein kinase BUB1
       YOR026W BUB3; Bub3p
       YGR113W DAM1; Dam1p
       YBR274W CHK1; serine/threonine protein kinase CHK1
       YDR113C PDS1; securin
       YGR098C ESP1; separase
       YOR195W SLK19; Slk19p
       YGL190C CDC55; protein phosphatase 2A regulatory subunit CDC55
       YDL134C PPH21; phosphoprotein phosphatase 2A catalytic subunit PPH21
       YDL188C PPH22; phosphoprotein phosphatase 2A catalytic subunit PPH22
       YAL016W TPD3; protein phosphatase 2A structural subunit TPD3
       YHR152W SPO12; Spo12p
       YDR110W FOB1; replication fork barrier binding protein FOB1
       YJL076W NET1; Net1p
       YMR001C CDC5; polo kinase CDC5
       YJR053W BFA1; Bfa1p
       YMR055C BUB2; Bub2p
       YAL024C LTE1; mitotic regulator LTE1
       YML064C TEM1; Ras family GTPase TEM1
       YAR019C CDC15; serine/threonine protein kinase CDC15
       YGR092W DBF2; serine/threonine-protein kinase DBF2
       YPR111W DBF20; serine/threonine-protein kinase DBF20
       YIL106W MOB1; Mob1p
       YFR028C CDC14; phosphoprotein phosphatase CDC14
       YDR146C SWI5; DNA-binding transcription factor SWI5
       YGL003C CDH1; Cdh1p
       YGR108W CLB1; B-type cyclin CLB1
       YPR119W CLB2; B-type cyclin CLB2
       YMR036C MIH1; putative tyrosine protein phosphatase MIH1
       YFL029C CAK1; cyclin-dependent protein kinase-activating kinase CAK1
       YBR135W CKS1; cyclin-dependent protein kinase regulatory subunit CKS1
       YJL187C SWE1; tyrosine protein kinase SWE1
       YIL046W MET30; ubiquitin-binding SDF ubiquitin ligase complex subunit MET30
       YCL024W KCC4; serine/threonine protein kinase
       YKL101W HSL1; protein kinase HSL1
       YBR133C HSL7; protein arginine N-methyltransferase
       YDR507C GIN4; protein kinase GIN4
       YLR288C MEC3; Mec3p
       YPL194W DDC1; Ddc1p
       YOR368W RAD17; Rad17p
       YER173W RAD24; Rad24p
       YBR136W MEC1; protein kinase MEC1
       YDR499W LCD1; Lcd1p
       YDR217C RAD9; chromatin-binding protein RAD9
       YCL061C MRC1; chromatin-modulating protein MRC1
       YPL153C RAD53; serine/threonine/tyrosine protein kinase RAD53
       YDL101C DUN1; serine/threonine protein kinase DUN1
       YLR176C RFX1; Rfx1p
       YBR112C CYC8; transcription regulator CYC8
       YCR084C TUP1; chromatin-silencing transcriptional regulator TUP1
       YFL008W SMC1; cohesin subunit SMC1
       YJL074C SMC3; cohesin subunit SMC3
       YDL003W MCD1; kleisin alpha
       YIL026C IRR1; Irr1p
       YDR180W SCC2; cohesin-loading factor complex subunit SCC2
       YER147C SCC4; cohesin-loading factor complex subunit SCC4
       YFR031C SMC2; condensin subunit SMC2
       YLR086W SMC4; condensin subunit SMC4
       YBL097W BRN1; condensin subunit BRN1
       YLR272C YCS4; condensin subunit YCS4
       YDR325W YCG1; condensin subunit YCG1
K06646 CLN3; G1/S-specific cyclin CLN3
K04563 CDC28; cyclin-dependent kinase [EC:2.7.11.22]
K06649 SWI4; regulatory protein SWI4
K06648 SWI6; regulatory protein SWI6
K12760 CLN1; G1/S-specific cyclin CLN1
K06650 CLN2; G1/S-specific cyclin CLN2
K03085 SIC1; substrate and inhibitor of the cyclin-dependent protein kinase CDC28
K06647 MBP1; transcription factor MBP1
K06651 CLB5_6; S-phase entry cyclin 5/6
K06651 CLB5_6; S-phase entry cyclin 5/6
K02213 CDC6; cell division control protein 6
K02603 ORC1; origin recognition complex subunit 1
K02604 ORC2; origin recognition complex subunit 2
K02605 ORC3; origin recognition complex subunit 3
K02606 ORC4; origin recognition complex subunit 4
K02607 ORC5; origin recognition complex subunit 5
K02608 ORC6; origin recognition complex subunit 6
K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3]
K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3]
K02212 MCM4; DNA replication licensing factor MCM4 [EC:5.6.2.3]
K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3]
K02542 MCM6; DNA replication licensing factor MCM6 [EC:5.6.2.3]
K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3]
K12414 TAH11; DNA replication licensing factor, required for pre-replication complex assembly
K02214 CDC7; cell division control protein 7 [EC:2.7.11.1]
K02309 DBF4; regulatory subunit for Cdc7p protein kinase
K06628 CDC45; cell division control protein 45
K12412 MCM1; pheromone receptor transcription factor
K12411 YOX1; homeobox protein YOX1/YHP1
K12411 YOX1; homeobox protein YOX1/YHP1
K12413 WHI5; G1-specific transcriptional repressor WHI5
K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24]
K04371 ERK; mitogen-activated protein kinase 1/3 [EC:2.7.11.24]
K06652 FAR1; cyclin-dependent kinase inhibitor FAR1
K03348 APC1; anaphase-promoting complex subunit 1
K03349 APC2; anaphase-promoting complex subunit 2
K03350 APC3; anaphase-promoting complex subunit 3
K03351 APC4; anaphase-promoting complex subunit 4
K03352 APC5; anaphase-promoting complex subunit 5
K03353 APC6; anaphase-promoting complex subunit 6
K03355 APC8; anaphase-promoting complex subunit 8
K03356 APC9; anaphase-promoting complex subunit 9
K03357 APC10; anaphase-promoting complex subunit 10
K03358 APC11; anaphase-promoting complex subunit 11
K03359 APC12; anaphase-promoting complex subunit 12
K12416 SWM1; anaphase-promoting complex subunit SWM1
K03363 CDC20; cell division cycle 20, cofactor of APC complex
K03094 SKP1; S-phase kinase-associated protein 1
K03347 CUL1; cullin 1
K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
K03360 GRR1; F-box and leucine-rich repeat protein GRR1
K03361 CDC4; F-box and WD-40 domain protein CDC4
K06656 PCL1; PHO85 cyclin-1
K06657 PCL2_9; PHO85 cyclin-2/9
K06657 PCL2_9; PHO85 cyclin-2/9
K06655 PHO85; negative regulator of the PHO system [EC:2.7.11.22]
K06653 PHO81; CDK inhibitor PHO81
K06654 PHO80; phosphate system cyclin PHO80
K06658 PHO4; phosphate system positive regulatory protein PHO4
K02646 PHO2; regulatory protein PHO2
K23458 PHO5_11_12; repressible acid phosphatase [EC:3.1.3.2]
K23458 PHO5_11_12; repressible acid phosphatase [EC:3.1.3.2]
K23458 PHO5_11_12; repressible acid phosphatase [EC:3.1.3.2]
K06659 CLB3_4; G2/mitotic-specific cyclin 3/4
K06659 CLB3_4; G2/mitotic-specific cyclin 3/4
K08866 TTK; serine/threonine-protein kinase TTK/MPS1 [EC:2.7.12.1]
K06679 MAD1; mitotic spindle assembly checkpoint protein MAD1
K02537 MAD2; mitotic spindle assembly checkpoint protein MAD2
K06680 MAD3; spindle assembly checkpoint component MAD3
K02178 BUB1; checkpoint serine/threonine-protein kinase [EC:2.7.11.1]
K02180 BUB3; cell cycle arrest protein BUB3
K02307 DAM1; DASH complex subunit DAM1
K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
K02627 PDS1; cell cycle regulator
K02365 ESP1; separase [EC:3.4.22.49]
K12575 SLK19; kinetochore protein SLK19
K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
K12576 SPO12; sporulation-specific protein 12
K12577 FOB1; DNA replication fork-blocking protein FOB1
K06687 NET1; nucleolar protein involved in exit from mitosis
K06660 CDC5; cell cycle serine/threonine-protein kinase CDC5/MSD2 [EC:2.7.11.21]
K02181 BFA1; cell cycle arrest protein BFA1
K02179 BUB2; cell cycle arrest protein BUB2
K06681 LTE1; Gdp/GTP exchange factor required for growth at low temperatures
K06682 TEM1; Gtp-binding protein of the ras superfamily involved in termination of M-phase
K06683 CDC15; cell division control protein CDC15 [EC:2.7.11.1]
K06684 DBF2; cell cycle protein kinase DBF2 [EC:2.7.11.-]
K06686 DBF20; cell cycle protein kinase DBF20 [EC:2.7.11.-]
K06685 MOB1; MOB kinase activator 1
K06639 CDC14; cell division cycle 14 [EC:3.1.3.16 3.1.3.48]
K09202 SWI5; regulatory protein SWI5
K03364 CDH1; cell division cycle 20-like protein 1, cofactor of APC complex
K02220 CLB1; G2/mitotic-specific cyclin 1
K23469 CLB2; G2/mitotic-specific cyclin 2
K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
K06667 CAK1; serine/threonine-protein kinase CAK1 [EC:2.7.11.22]
K02219 CKS1; cyclin-dependent kinase regulatory subunit CKS1
K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
K10259 MET30; F-box and WD-40 domain protein MET30
K18639 KCC4; serine/threonine-protein kinase KCC4 [EC:2.7.11.1]
K02515 HSL1; serine/threonine-protein kinase HSL1, negative regulator of Swe1 kinase [EC:2.7.11.-]
K02516 PRMT5; type II protein arginine methyltransferase [EC:2.1.1.320]
K06668 GIN4; serine/threonine-protein kinase GIN4 [EC:2.7.11.-]
K02544 MEC3; G2-specific checkpoint protein
K06663 DDC1; DNA damage checkpoint protein
K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
K06662 HRAD17; cell cycle checkpoint protein
K02543 MEC1; cell cycle checkpoint protein MEC1
K12578 LCD1; DNA damage checkpoint protein LCD1
K06661 RAD9; DNA repair protein RAD9
K11272 MRC1; mediator of replication checkpoint protein 1
K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-]
K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
K09173 RFX1_2_3; regulatory factor X 1/2/3
K06665 SSN6; general transcriptional corepressor CYC8
K06666 TUP1; general transcriptional corepressor TUP1
K06636 SMC1; structural maintenance of chromosome 1
K06669 SMC3; structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
K06670 SCC1; cohesin complex subunit SCC1
K06671 STAG1_2; cohesin complex subunit SA-1/2
K06672 SCC2; cohesin loading factor subunit SCC2
K06673 SCC4; cohesin loading factor subunit SCC4
K06674 SMC2; structural maintenance of chromosome 2
K06675 SMC4; structural maintenance of chromosome 4
K06676 BRRN1; condensin complex subunit 2
K06677 YCS4; condensin complex subunit 1
K06678 YCG1; condensin complex subunit 3
     04112 Cell cycle - Caulobacter
     04113 Meiosis - yeast [PATH:sce04113]
     04114 Oocyte meiosis
     04210 Apoptosis
     04214 Apoptosis - fly
     04215 Apoptosis - multiple species
     04216 Ferroptosis
     04217 Necroptosis
     04115 p53 signaling pathway
     04218 Cellular senescence
 
   09144 Cellular community - eukaryotes
 
   09145 Cellular community - prokaryotes
 
   09142 Cell motility
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:sce03000]
     03021 Transcription machinery [BR:sce03021]
     03019 Messenger RNA biogenesis [BR:sce03019]
     03041 Spliceosome [BR:sce03041]
     03011 Ribosome [BR:sce03011]
     03009 Ribosome biogenesis [BR:sce03009]
     03016 Transfer RNA biogenesis [BR:sce03016]
     03012 Translation factors [BR:sce03012]
     03110 Chaperones and folding catalysts [BR:sce03110]
     04131 Membrane trafficking [BR:sce04131]
     04121 Ubiquitin system [BR:sce04121]
       YLL039C UBI4; ubiquitin
       YIL148W RPL40A; ubiquitin-ribosomal 60S subunit protein L40A fusion protein
       YKR094C RPL40B; ubiquitin-ribosomal 60S subunit protein L40B fusion protein
       YLR167W RPS31; ubiquitin-ribosomal 40S subunit protein S31 fusion protein
       YDR139C RUB1; NEDD8 family protein RUB1
       YOR182C RPS30B; ribosomal 40S subunit protein S30B
       YLR287C-A RPS30A; ribosomal 40S subunit protein S30A
       YBL078C ATG8; ubiquitin-like protein ATG8
       YBR217W ATG12; Atg12p
       YIL008W URM1; ubiquitin-related modifier URM1
       YKL210W UBA1; E1 ubiquitin-activating protein UBA1
       YPR180W AOS1; E1 ubiquitin-activating protein AOS1
       YDR390C UBA2; E1 ubiquitin-activating protein UBA2
       YPR066W UBA3; NEDD8-activating protein UBA3
       YPL003W ULA1; Ula1p
       YHR111W UBA4; Uba4p
       YHR171W ATG7; Atg7p
       YGL058W RAD6; E2 ubiquitin-conjugating protein RAD6
       YOR339C UBC11; putative E2 ubiquitin-protein ligase UBC11
       YDR059C UBC5; E2 ubiquitin-conjugating protein UBC5
       YBR082C UBC4; E2 ubiquitin-conjugating protein UBC4
       YMR022W UBC7; E2 ubiquitin-conjugating protein UBC7
       YEL012W UBC8; E2 ubiquitin-conjugating protein UBC8
       YER100W UBC6; E2 ubiquitin-conjugating protein UBC6
       YDR177W UBC1; E2 ubiquitin-conjugating protein UBC1
       YDR092W UBC13; E2 ubiquitin-conjugating protein UBC13
       YDR054C CDC34; SCF E2 ubiquitin-protein ligase catalytic subunit CDC34
       YGR133W PEX4; E2 ubiquitin-protein ligase peroxin 4
       YDL064W UBC9; E2 SUMO-conjugating protein UBC9
       YLR306W UBC12; NEDD8-conjugating protein UBC12
       YNR007C ATG3; Atg3p
       YLL042C ATG10; E2-like conjugating enzyme
       YGL141W HUL5; ubiquitin-ubiquitin ligase HUL5
       YJR141W IPA1; putative polyadenylation protein
       YKL010C UFD4; putative ubiquitin-protein ligase UFD4
       YER125W RSP5; NEDD4 family E3 ubiquitin-protein ligase
       YDR457W TOM1; E3 ubiquitin-protein ligase TOM1
       YJR036C HUL4; putative E3 ubiquitin-protein ligase HUL4
       YDL190C UFD2; ubiquitin-ubiquitin ligase UFD2
       YLL036C PRP19; E3 ubiquitin-protein ligase PRP19
       YDL074C BRE1; E3 ubiquitin-protein ligase BRE1
       YIL030C SSM4; E3 ubiquitin-protein ligase SSM4
       YNL023C FAP1; Fap1p
       YDR265W PEX10; ubiquitin-protein ligase peroxin 10
       YMR026C PEX12; ubiquitin-protein ligase peroxin 12
       YJL210W PEX2; ubiquitin-protein ligase peroxin 2
       YKR017C HEL1; E3 ubiquitin-protein ligase HEL1
       YML068W ITT1; RBR-type E3 ubiquitin transferase
       YGR184C UBR1; E3 ubiquitin-protein ligase UBR1
       YHL010C ETP1; Etp1p
       YER068W MOT2; CCR4-NOT core ubiquitin-protein ligase subunit MOT2
       YMR247C RKR1; ubiquitin-protein ligase RKR1
       YCR066W RAD18; E3 ubiquitin-protein ligase RAD18
       YLR427W MAG2; Mag2p
       YOR308C SNU66; U4/U6-U5 snRNP complex subunit SNU66
       YLR247C IRC20; E3 ubiquitin-protein ligase IRC20
       YOL013C HRD1; E3 ubiquitin-protein ligase HRD1
       YDR266C HEL2; E3 ubiquitin-protein ligase HEL2
       YKL034W TUL1; ubiquitin-protein ligase TUL1
       YHR115C DMA1; ubiquitin-conjugating protein DMA1
       YNL116W DMA2; ubiquitin-conjugating protein DMA2
       YLR007W NSE1; Smc5-Smc6 complex subunit NSE1
       YOL133W HRT1; SCF ubiquitin ligase complex subunit HRT1
       YDR409W SIZ1; SUMO ligase SIZ1
       YEL019C MMS21; SUMO ligase MMS21
       YLR394W CST9; SUMO ligase CST9
       YLR128W DCN1; NEDD8 ligase DCN1
       YDL132W CDC53; cullin CDC53
       YDR328C SKP1; SCF ubiquitin ligase subunit SKP1
       YIL046W MET30; ubiquitin-binding SDF ubiquitin ligase complex subunit MET30
       YFL009W CDC4; SCF ubiquitin ligase complex subunit CDC4
       YER051W JHD1; [Histone H3]-lysine-36 demethylase
       YJR090C GRR1; SCF ubiquitin ligase complex subunit GRR1
       YOR080W DIA2; DNA-binding SCF ubiquitin ligase subunit DIA2
       YLR097C HRT3; SCF ubiquitin ligase complex subunit HRT3
       YLR368W MDM30; SCF ubiquitin ligase complex subunit MDM30
       YJL204C RCY1; Rcy1p
       YBR280C SAF1; SCF ubiquitin ligase complex subunit SAF1
       YML088W UFO1; SCF ubiquitin ligase complex subunit UFO1
       YPL046C ELC1; elongin C
       YGR003W CUL3; cullin CUL3
       YIL001W uncharacterized protein
       YDR030C RAD28; Rad28p
       YPL247C uncharacterized protein
       YLL011W SOF1; rRNA-processing protein SOF1
       YCL039W GID7; glucose-induced degradation complex subunit GID7
       YDL156W CMR1; Cmr1p
       YJL047C RTT101; cullin RTT101
       YPR164W MMS1; Mms1p
       YLR320W MMS22; Mms22p
       YDL008W APC11; anaphase promoting complex subunit 11
       YLR127C APC2; anaphase promoting complex subunit 2
       YGL116W CDC20; ubiquitin-protein transferase activating protein CDC20
       YGL003C CDH1; Cdh1p
       YGR225W AMA1; Ama1p
       YNL172W APC1; anaphase promoting complex subunit 1
       YBL084C CDC27; anaphase promoting complex subunit CDC27
       YDR118W APC4; anaphase promoting complex subunit 4
       YOR249C APC5; anaphase promoting complex subunit 5
       YKL022C CDC16; anaphase promoting complex subunit CDC16
       YHR166C CDC23; anaphase promoting complex subunit CDC23
       YLR102C APC9; anaphase promoting complex subunit 9
       YGL240W DOC1; anaphase promoting complex subunit DOC1
       YFR036W CDC26; anaphase promoting complex subunit CDC26
       YDR260C SWM1; Swm1p
       YER095W RAD51; recombinase RAD51
       YDR255C RMD5; ubiquitin-protein ligase RMD5
       YGL227W VID30; glucose-induced degradation complex subunit VID30
       YIL097W FYV10; glucose-induced degradation complex subunit FYV10
       YGR066C GID10; Gid10p
       YBR105C VID24; glucose-induced degradation complex subunit VID24
       YMR135C GID8; glucose-induced degradation complex subunit GID8
       YDL013W SLX5; SUMO-targeted ubiquitin ligase complex subunit SLX5
       YER116C SLX8; SUMO-targeted ubiquitin ligase complex subunit SLX8
       YDR330W UBX5; Ubx5p
       YJR099W YUH1; ubiquitin-specific protease YUH1
       YJL197W UBP12; putative ubiquitin-specific protease UBP12
       YBR058C UBP14; ubiquitin-specific protease UBP14
       YMR304W UBP15; ubiquitin-specific protease UBP15
       YDR069C DOA4; ubiquitin-specific protease DOA4
       YER144C UBP5; putative ubiquitin-specific protease UBP5
       YER151C UBP3; mRNA-binding ubiquitin-specific protease UBP3
       YFR010W UBP6; ubiquitin-specific protease UBP6
       YMR223W UBP8; ubiquitin-specific protease UBP8
       YOR124C UBP2; ubiquitin-specific protease UBP2
       YDL122W UBP1; ubiquitin-specific protease UBP1
       YKR098C UBP11; ubiquitin-specific protease UBP11
       YIL156W UBP7; ubiquitin-specific protease UBP7
       YER098W UBP9; putative ubiquitin-specific protease UBP9
       YBL067C UBP13; ubiquitin-specific protease UBP13
       YNL186W UBP10; ubiquitin-specific protease UBP10
       YPL072W UBP16; putative ubiquitin-specific protease UBP16
       YHL013C OTU2; Otu2p
       YPL191C MIY2; ubiquitinyl hydrolase 1
       YGL082W uncharacterized protein
       YFR004W RPN11; proteasome regulatory particle lid subunit RPN11
       YPL020C ULP1; SUMO protease ULP1
       YIL031W ULP2; SUMO protease ULP2
       YDL216C RRI1; COP9 signalosome catalytic subunit RRI1
       YDR179C CSN9; Csn9p
       YOL117W RRI2; Rri2p
       YIL071C PCI8; Pci8p
       YJR084W CSN12; uncharacterized protein
       YMR025W CSI1; Csi1p
K08770 UBC; ubiquitin C
K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
K12158 NEDD8; ubiquitin-like protein Nedd8
K02983 RP-S30e; small subunit ribosomal protein S30e
K02983 RP-S30e; small subunit ribosomal protein S30e
K08341 GABARAP; GABA(A) receptor-associated protein
K08336 ATG12; ubiquitin-like protein ATG12
K12161 URM1; ubiquitin related modifier 1
K03178 UBE1; ubiquitin-activating enzyme E1 [EC:6.2.1.45]
K10684 UBLE1A; ubiquitin-like 1-activating enzyme E1 A [EC:6.2.1.45]
K10685 UBLE1B; ubiquitin-like 1-activating enzyme E1 B [EC:6.2.1.45]
K10686 UBA3; NEDD8-activating enzyme E1 [EC:6.2.1.64]
K04532 NAE1; NEDD8-activating enzyme E1 regulatory subunit
K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11]
K08337 ATG7; ubiquitin-like modifier-activating enzyme ATG7
K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
K06688 UBE2C; ubiquitin-conjugating enzyme E2 C [EC:2.3.2.23]
K06689 UBE2D; ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]
K06689 UBE2D; ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]
K04555 UBE2G2; ubiquitin-conjugating enzyme E2 G2 [EC:2.3.2.23]
K10576 UBE2H; ubiquitin-conjugating enzyme E2 H [EC:2.3.2.23]
K04554 UBE2J2; ubiquitin-conjugating enzyme E2 J2 [EC:2.3.2.23]
K04649 UBE2K; ubiquitin-conjugating enzyme (huntingtin interacting protein 2) [EC:2.3.2.23]
K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
K02207 UBE2R; ubiquitin-conjugating enzyme E2 R [EC:2.3.2.23]
K10689 PEX4; peroxin-4 [EC:2.3.2.23]
K10577 UBE2I; ubiquitin-conjugating enzyme E2 I
K10579 UBE2M; ubiquitin-conjugating enzyme E2 M [EC:2.3.2.34]
K08343 ATG3; ubiquitin-like-conjugating enzyme ATG3
K08338 ATG10; ubiquitin-like-conjugating enzyme ATG10
K10589 UBE3C; ubiquitin-protein ligase E3 C [EC:2.3.2.26]
K20803 UBE3D; ubiquitin-protein ligase E3 D [EC:2.3.2.26]
K10590 TRIP12; E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]
K10591 NEDD4; E3 ubiquitin-protein ligase NEDD4 [EC:2.3.2.26]
K10592 HUWE1; E3 ubiquitin-protein ligase HUWE1 [EC:2.3.2.26]
K12232 HECTD2; E3 ubiquitin-protein ligase HECTD2 [EC:2.3.2.26]
K10597 UBE4B; ubiquitin conjugation factor E4 B [EC:2.3.2.27]
K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
K10696 BRE1; E3 ubiquitin-protein ligase BRE1 [EC:2.3.2.27]
K10661 MARCH6; E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27]
K12236 NFX1; transcriptional repressor NF-X1
K13346 PEX10; peroxin-10
K13345 PEX12; peroxin-12
K06664 PEX2; peroxin-2
K11968 ARIH1; ariadne-1 [EC:2.3.2.31]
K11971 RNF14; E3 ubiquitin-protein ligase RNF14 [EC:2.3.2.31]
K10625 UBR1; E3 ubiquitin-protein ligase UBR1 [EC:2.3.2.27]
K10632 BRAP; BRCA1-associated protein [EC:2.3.2.27]
K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
K26979 RNF10; E3 ubiquitin-protein ligase RNF10 [EC:2.3.2.27]
K11984 SART1; U4/U6.U5 tri-snRNP-associated protein 1
K15710 SHPRH; E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.- 2.3.2.27]
K10601 SYVN1; E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
K22381 ZNF598; E3 ubiquitin-protein ligase ZNF598 [EC:2.3.2.27]
K23788 TUL1; transmembrane E3 ubiquitin-protein ligase [EC:2.3.2.27]
K23787 DMA1_2; E3 ubiquitin-protein ligase DMA1/2 [EC:2.3.2.27]
K23787 DMA1_2; E3 ubiquitin-protein ligase DMA1/2 [EC:2.3.2.27]
K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
K04706 PIAS1; E3 SUMO-protein ligase PIAS1 [EC:2.3.2.-]
K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
K25662 RNF212; E3 SUMO-protein ligase RNF212 [EC:2.3.2.-]
K17822 DCUN1D1_2; DCN1-like protein 1/2
K03347 CUL1; cullin 1
K03094 SKP1; S-phase kinase-associated protein 1
K10259 MET30; F-box and WD-40 domain protein MET30
K03361 CDC4; F-box and WD-40 domain protein CDC4
K10276 FBXL10_11; F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
K03360 GRR1; F-box and leucine-rich repeat protein GRR1
K15068 DIA2; protein DIA2
K10295 FBXO9; F-box protein 9
K15070 MDM30; mitochondrial distribution and morphology protein 30
K15071 RCY1; recyclin-1
K15072 SAF1; SCF-associated factor 1
K15073 UFO1; ubiquitin ligase complex F-box protein UFO1
K03872 ELOC; elongin-C
K03869 CUL3; cullin 3
K10520 ABTB1; ankyrin repeat and BTB/POZ domain-containing protein 1
K10570 ERCC8; DNA excision repair protein ERCC-8
K11805 DCAF7; DDB1- and CUL4-associated factor 7
K11806 DCAF13; DDB1- and CUL4-associated factor 13
K22382 WDR26; WD repeat-containing protein 26
K24755 WDR76; WD repeat-containing protein 76
K26124 RTT101; cullin 8
K26123 MMS1; E3 ubiquitin-protein ligase linker protein MMS1
K26122 MMS22; E3 ubiquitin-protein ligase substrate receptor MMS22
K03358 APC11; anaphase-promoting complex subunit 11
K03349 APC2; anaphase-promoting complex subunit 2
K03363 CDC20; cell division cycle 20, cofactor of APC complex
K03364 CDH1; cell division cycle 20-like protein 1, cofactor of APC complex
K12782 AMA1; meiosis-specific APC/C activator protein AMA1
K03348 APC1; anaphase-promoting complex subunit 1
K03350 APC3; anaphase-promoting complex subunit 3
K03351 APC4; anaphase-promoting complex subunit 4
K03352 APC5; anaphase-promoting complex subunit 5
K03353 APC6; anaphase-promoting complex subunit 6
K03355 APC8; anaphase-promoting complex subunit 8
K03356 APC9; anaphase-promoting complex subunit 9
K03357 APC10; anaphase-promoting complex subunit 10
K03359 APC12; anaphase-promoting complex subunit 12
K12416 SWM1; anaphase-promoting complex subunit SWM1
K04482 RAD51; DNA repair protein RAD51
K23333 RMND5; E3 ubiquitin-protein transferase RMND5 [EC:2.3.2.27]
K23334 RANBP9_10; Ran-binding protein 9/10
K18624 MAEA; macrophage erythroblast attacher
K23335 GID4; glucose-induced degradation protein 4
K23335 GID4; glucose-induced degradation protein 4
K23338 GID8; glucose-induced degradation protein 8
K22645 SLX5; E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX5 [EC:2.3.2.27]
K22646 SLX8; E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8 [EC:2.3.2.27]
K24350 UBXN7; UBX domain-containing protein 7
K05609 UCHL3; ubiquitin carboxyl-terminal hydrolase L3 [EC:3.4.19.12]
K11835 USP4_11; ubiquitin carboxyl-terminal hydrolase 4/11 [EC:3.4.19.12]
K11836 USP5_13; ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
K11838 USP7; ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12]
K11839 USP8; ubiquitin carboxyl-terminal hydrolase 8 [EC:3.4.19.12]
K11839 USP8; ubiquitin carboxyl-terminal hydrolase 8 [EC:3.4.19.12]
K11841 USP10; ubiquitin carboxyl-terminal hydrolase 10 [EC:3.4.19.12]
K11843 USP14; ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12]
K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
K11849 USP25; ubiquitin carboxyl-terminal hydrolase 25 [EC:3.4.19.12]
K11870 UBP1; ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]
K11871 UBP7_11; ubiquitin carboxyl-terminal hydrolase 7/11 [EC:3.4.19.12]
K11871 UBP7_11; ubiquitin carboxyl-terminal hydrolase 7/11 [EC:3.4.19.12]
K11872 UBP9_13; ubiquitin carboxyl-terminal hydrolase 9/13 [EC:3.4.19.12]
K11872 UBP9_13; ubiquitin carboxyl-terminal hydrolase 9/13 [EC:3.4.19.12]
K11873 UBP10; ubiquitin carboxyl-terminal hydrolase 10 [EC:3.4.19.12]
K11874 UBP16; ubiquitin carboxyl-terminal hydrolase 16 [EC:3.4.19.12]
K18342 OTUD6; OTU domain-containing protein 6 [EC:3.4.19.12]
K01309 MINDY1_2; ubiquitin carboxyl-terminal hydrolase MINDY-1/2 [EC:3.4.19.12]
K01309 MINDY1_2; ubiquitin carboxyl-terminal hydrolase MINDY-1/2 [EC:3.4.19.12]
K03030 PSMD14; 26S proteasome regulatory subunit N11
K08592 SENP1; sentrin-specific protease 1 [EC:3.4.22.68]
K08596 SENP7; sentrin-specific protease 7 [EC:3.4.22.68]
K09613 COPS5; COP9 signalosome complex subunit 5 [EC:3.4.-.-]
K24365 CSN9; COP9 signalosome complex subunit 9
K24366 RRI2; COP9 signalosome complex subunit 10
K24367 PCI8; COP9 signalosome complex subunit 11
K24364 CSN12; COP9 signalosome complex subunit 12
K24368 CSI1; COP9 signalosome-interactor 1
     03051 Proteasome [BR:sce03051]
     03032 DNA replication proteins [BR:sce03032]
     03036 Chromosome and associated proteins [BR:sce03036]
     03400 DNA repair and recombination proteins [BR:sce03400]
       YDL200C MGT1; methylated-DNA--protein-cysteine methyltransferase
       YOR386W PHR1; deoxyribodipyrimidine photo-lyase PHR1
       YML021C UNG1; uracil-DNA glycosylase
       YML060W OGG1; 8-oxoguanine glycosylase OGG1
       YAL015C NTG1; bifunctional N-glycosylase/AP lyase NTG1
       YOL043C NTG2; bifunctional N-glycosylase/AP lyase NTG2
       YKL114C APN1; DNA-(apurinic or apyrimidinic site) lyase APN1
       YBL019W APN2; DNA-(apurinic or apyrimidinic site) lyase APN2
       YDL102W POL3; DNA-directed DNA polymerase delta POL3
       YJR006W POL31; DNA-directed DNA polymerase delta subunit POL31
       YJR043C POL32; DNA polymerase delta subunit POL32
       YNL262W POL2; DNA polymerase epsilon catalytic subunit
       YPR175W DPB2; DNA polymerase epsilon noncatalytic subunit
       YDR121W DPB4; DNA polymerase epsilon noncatalytic subunit
       YBR278W DPB3; DNA polymerase epsilon noncatalytic subunit
       YJL065C DLS1; Dls1p
       YBR088C POL30; proliferating cell nuclear antigen
       YKL113C RAD27; multifunctional nuclease RAD27
       YDL164C CDC9; DNA ligase (ATP) CDC9
       YBR223C TDP1; tyrosyl-DNA phosphodiesterase 1
       YOR258W HNT3; DNA 5'-adenosine monophosphate hydrolase
       YMR156C TPP1; polynucleotide 3'-phosphatase
       YER162C RAD4; Rad4p
       YEL037C RAD23; Rad23p
       YOL133W HRT1; SCF ubiquitin ligase complex subunit HRT1
       YJR052W RAD7; UV-damaged DNA-binding protein RAD7
       YBR114W RAD16; DNA repair protein RAD16
       YDL140C RPO21; DNA-directed RNA polymerase II core subunit RPO21
       YOR151C RPB2; DNA-directed RNA polymerase II core subunit RPB2
       YIL021W RPB3; DNA-directed RNA polymerase II core subunit RPB3
       YJL140W RPB4; DNA-directed RNA polymerase II subunit RPB4
       YBR154C RPB5; DNA-directed RNA polymerase core subunit RPB5
       YPR187W RPO26; DNA-directed RNA polymerase core subunit RPO26
       YDR404C RPB7; DNA-directed RNA polymerase II subunit RPB7
       YOR224C RPB8; DNA-directed RNA polymerase core subunit RPB8
       YGL070C RPB9; DNA-directed RNA polymerase II core subunit RPB9
       YOR210W RPB10; DNA-directed RNA polymerase core subunit RPB10
       YOL005C RPB11; DNA-directed RNA polymerase II core subunit RPB11
       YHR143W-A RPC10; DNA-directed RNA polymerase core subunit RPC10
       YDR030C RAD28; Rad28p
       YJR035W RAD26; DNA-dependent ATPase RAD26
       YKL160W ELF1; Elf1p
       YIL143C SSL2; TFIIH/NER complex ATPase/helicase subunit SSL2
       YER171W RAD3; TFIIH/NER complex ATP-dependent 5'-3' DNA helicase subunit RAD3
       YDR311W TFB1; TFIIH/NER complex subunit TFB1
       YLR005W SSL1; TFIIH/NER complex subunit SSL1
       YPR056W TFB4; TFIIH/NER complex subunit TFB4
       YPL122C TFB2; TFIIH/NER complex subunit TFB2
       YDR079C-A TFB5; TFIIH complex subunit TFB5
       YDL108W KIN28; TFIIH complex serine/threonine-protein kinase subunit KIN28
       YPR025C CCL1; TFIIH complex kinase subunit CCL1
       YDR460W TFB3; TFIIH/NER complex subunit TFB3
       YAR007C RFA1; replication factor A subunit protein RFA1
       YNL312W RFA2; Rfa2p
       YMR201C RAD14; DNA repair protein RAD14
       YML095C RAD10; DNA repair protein RAD10
       YPL022W RAD1; ssDNA endodeoxyribonuclease RAD1
       YGR258C RAD2; ssDNA endodeoxyribonuclease RAD2
       YIL128W MET18; Met18p
       YGR003W CUL3; cullin CUL3
       YPL046C ELC1; elongin C
       YNL230C ELA1; elongin A
       YOL090W MSH2; mismatch repair ATPase MSH2
       YCR092C MSH3; mismatch repair protein MSH3
       YDR097C MSH6; mismatch repair ATPase MSH6
       YLR035C MLH2; mismatch repair protein MLH2
       YMR167W MLH1; mismatch repair ATPase MLH1
       YNL082W PMS1; ATP-binding mismatch repair protein
       YPL164C MLH3; mismatch repair protein MLH3
       YOR217W RFC1; replication factor C subunit 1
       YJR068W RFC2; replication factor C subunit 2
       YOL094C RFC4; replication factor C subunit 4
       YNL290W RFC3; replication factor C subunit 3
       YBR087W RFC5; replication factor C subunit 5
       YOR033C EXO1; Rad2 family nuclease EXO1
       YDL156W CMR1; Cmr1p
       YMR224C MRE11; MRX complex nuclease subunit
       YNL250W RAD50; MRX complex DNA-binding subunit
       YDR369C XRS2; Xrs2p
       YER095W RAD51; recombinase RAD51
       YDR076W RAD55; putative DNA-dependent ATPase RAD55
       YDR004W RAD57; putative DNA-dependent ATPase RAD57
       YML032C RAD52; recombinase RAD52
       YDL059C RAD59; Rad59p
       YGL163C RAD54; DNA-dependent ATPase RAD54
       YBR073W RDH54; DNA-dependent ATPase RDH54
       YMR190C SGS1; ATP-dependent DNA helicase SGS1
       YLR234W TOP3; DNA topoisomerase 3
       YPL024W RMI1; Rmi1p
       YDR075W PPH3; phosphoprotein phosphatase PP4 catalytic subunit PPH3
       YNL201C PSY2; Psy2p
       YOL034W SMC5; DNA repair ATPase SMC5
       YLR383W SMC6; DNA repair protein SMC6
       YLR007W NSE1; Smc5-Smc6 complex subunit NSE1
       YEL019C MMS21; SUMO ligase MMS21
       YDR288W NSE3; Smc5-Smc6 complex subunit NSE3
       YDL105W NSE4; Smc5-Smc6 complex subunit NSE4
       YBR098W MMS4; Mms4p
       YDR386W MUS81; Mus81p
       YDR363W-A SEM1; proteasome regulatory particle lid subunit SEM1
       YHR079C-A SAE3; Sae3p
       YPL121C MEI5; Mei5p
       YBR228W SLX1; endonuclease
       YLR135W SLX4; Slx4p
       YER041W YEN1; crossover junction endodeoxyribonuclease
       YPR023C EAF3; Eaf3p
       YER047C SAP1; putative AAA family ATPase SAP1
       YHR134W WSS1; metalloendopeptidase WSS1
       YIR002C MPH1; 3'-5' DNA helicase
       YAL027W SAW1; DNA-binding protein SAW1
       YJL047C RTT101; cullin RTT101
       YLR320W MMS22; Mms22p
       YPR164W MMS1; Mms1p
       YMR284W YKU70; ATP-dependent DNA helicase YKU70
       YMR106C YKU80; ATP-dependent DNA helicase YKU80
       YOR005C DNL4; DNA ligase (ATP) DNL4
       YGL090W LIF1; Lif1p
       YLR265C NEJ1; Nej1p
       YCR014C POL4; DNA-directed DNA polymerase IV
       YOL086W-A MHF1; Mhf1p
       YGR099W TEL2; Tel2p
       YOL087C DUF1; Duf1p
       YNL187W SWT21; Swt21p
       YDR419W RAD30; DNA-directed DNA polymerase eta
       YOR346W REV1; deoxycytidyl transferase
       YPL167C REV3; DNA-directed DNA polymerase
       YIL139C REV7; Rev7p
       YGL058W RAD6; E2 ubiquitin-conjugating protein RAD6
       YCR066W RAD18; E3 ubiquitin-protein ligase RAD18
       YLR032W RAD5; DNA helicase RAD5
       YGL087C MMS2; E2 ubiquitin-conjugating protein MMS2
       YDR092W UBC13; E2 ubiquitin-conjugating protein UBC13
       YOR368W RAD17; Rad17p
       YER173W RAD24; Rad24p
       YLR288C MEC3; Mec3p
       YPL194W DDC1; Ddc1p
       YNL273W TOF1; Tof1p
       YMR048W CSM3; Csm3p
       YCL061C MRC1; chromatin-modulating protein MRC1
       YKL033W TTI1; Tti1p
       YOL111C MDY2; Mdy2p
       YOR164C GET4; Get4p
       YBL088C TEL1; DNA-binding protein kinase TEL1
       YBR274W CHK1; serine/threonine protein kinase CHK1
       YDL101C DUN1; serine/threonine protein kinase DUN1
       YMR036C MIH1; putative tyrosine protein phosphatase MIH1
       YER177W BMH1; 14-3-3 family protein BMH1
       YDR099W BMH2; 14-3-3 family protein BMH2
       YPL153C RAD53; serine/threonine/tyrosine protein kinase RAD53
       YDR217C RAD9; chromatin-binding protein RAD9
       YBR136W MEC1; protein kinase MEC1
       YBR158W AMN1; Amn1p
       YJL187C SWE1; tyrosine protein kinase SWE1
       YOR372C NDD1; Ndd1p
       YNL068C FKH2; forkhead family transcription factor FKH2
       YIL131C FKH1; forkhead family transcription factor FKH1
       YPR173C VPS4; AAA family ATPase VPS4
       YEL055C POL5; DNA-directed DNA polymerase
       YMR137C PSO2; DNA cross-link repair protein PSO2
       YBR163W EXO5; Exo5p
       YLL036C PRP19; E3 ubiquitin-protein ligase PRP19
       YMR213W CEF1; Cef1p
       YPL151C PRP46; mRNA splicing protein PRP46
       YBR252W DUT1; bifunctional dITP/dUTP diphosphatase
       YIL066C RNR3; ribonucleotide-diphosphate reductase subunit RNR3
       YER070W RNR1; ribonucleotide-diphosphate reductase subunit RNR1
       YJL026W RNR2; ribonucleotide-diphosphate reductase subunit RNR2
       YGR180C RNR4; ribonucleotide-diphosphate reductase subunit RNR4
       YER142C MAG1; DNA-3-methyladenine glycosylase II
       YJL092W SRS2; DNA helicase SRS2
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
K02328 POLD2; DNA polymerase delta subunit 2
K03504 POLD3; DNA polymerase delta subunit 3
K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
K08075 E3.1.3.32; polynucleotide 3'-phosphatase [EC:3.1.3.32]
K10838 XPC; xeroderma pigmentosum group C-complementing protein
K10839 RAD23; UV excision repair protein RAD23
K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
K15082 RAD7; DNA repair protein RAD7
K15083 RAD16; DNA repair protein RAD16
K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
K10570 ERCC8; DNA excision repair protein ERCC-8
K10841 ERCC6; DNA excision repair protein ERCC-6
K25829 ELOF1; transcription elongation factor 1
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
K06634 CCNH; cyclin H
K10842 MNAT1; CDK-activating kinase assembly factor MAT1
K07466 RFA1; replication factor A1
K10739 RFA2; replication factor A2
K10847 XPA; DNA-repair protein complementing XP-A cells
K10849 ERCC1; DNA excision repair protein ERCC-1
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10846 ERCC5; DNA excision repair protein ERCC-5
K15075 MET18; DNA repair/transcription protein MET18/MMS19
K03869 CUL3; cullin 3
K03872 ELOC; elongin-C
K15077 ELA1; elongin-A
K08735 MSH2; DNA mismatch repair protein MSH2
K08736 MSH3; DNA mismatch repair protein MSH3
K08737 MSH6; DNA mismatch repair protein MSH6
K10864 PMS1; DNA mismatch repair protein PMS1
K08734 MLH1; DNA mismatch repair protein MLH1
K10858 PMS2; DNA mismatch repair protein PMS2
K08739 MLH3; DNA mismatch repair protein MLH3
K10754 RFC1; replication factor C subunit 1
K10755 RFC2_4; replication factor C subunit 2/4
K10755 RFC2_4; replication factor C subunit 2/4
K10756 RFC3_5; replication factor C subunit 3/5
K10756 RFC3_5; replication factor C subunit 3/5
K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
K24755 WDR76; WD repeat-containing protein 76
K10865 MRE11; double-strand break repair protein MRE11
K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
K10868 XRS2; DNA repair protein XRS2
K04482 RAD51; DNA repair protein RAD51
K10957 RAD55; DNA repair protein RAD55
K10958 RAD57; DNA repair protein RAD57
K10873 RAD52; DNA repair and recombination protein RAD52
K10959 RAD59; DNA repair protein RAD59
K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
K15364 NCE4; RecQ-mediated genome instability protein 1
K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
K17491 SMEK; protein phosphatase 4 regulatory subunit 3
K22803 SMC5; structural maintenance of chromosomes protein 5
K22804 SMC6; structural maintenance of chromosomes protein 6
K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
K22823 NSMCE3; non-structural maintenance of chromosomes element 3
K22825 NSMCE4; non-structural maintenance of chromosomes element 4
K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
K10881 SHFM1; 26 proteasome complex subunit DSS1
K10991 SWI5; DNA repair protein Swi5/Sae3
K10992 SFR1; Swi5-dependent recombination DNA repair protein 1
K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
K15079 SLX4; structure-specific endonuclease subunit SLX4
K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
K11339 MORF4L1; mortality factor 4-like protein 1
K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
K15080 SAW1; single-strand annealing weakened protein 1
K26124 RTT101; cullin 8
K26122 MMS22; E3 ubiquitin-protein ligase substrate receptor MMS22
K26123 MMS1; E3 ubiquitin-protein ligase linker protein MMS1
K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
K10982 LIF1; ligase-interacting factor 1
K10983 NEJ1; non-homologous end-joining protein 1
K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
K11511 APITD1; centromere protein S
K11137 TELO2; telomere length regulation protein
K15361 WDR48; WD repeat-containing protein 48
K23314 WRAP53; telomerase Cajal body protein 1
K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
K03508 POLZ2; DNA polymerase zeta [EC:2.7.7.7]
K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
K06662 HRAD17; cell cycle checkpoint protein
K02544 MEC3; G2-specific checkpoint protein
K06663 DDC1; DNA damage checkpoint protein
K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
K11272 MRC1; mediator of replication checkpoint protein 1
K20403 TTI1; TELO2-interacting protein 1
K23388 UBL4; ubiquitin-like protein 4
K23387 GET4; golgi to ER traffic protein 4
K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
K06630 YWHAE; 14-3-3 protein epsilon
K06630 YWHAE; 14-3-3 protein epsilon
K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-]
K06661 RAD9; DNA repair protein RAD9
K02543 MEC1; cell cycle checkpoint protein MEC1
K15081 AMN1; antagonist of mitotic exit network protein 1
K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
K24663 NDD1; nuclear division defective protein 1
K24664 FKH; forkhead protein FKH
K24664 FKH; forkhead protein FKH
K12196 VPS4; vacuolar protein-sorting-associated protein 4
K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
K15340 DCLRE1A; DNA cross-link repair 1A protein
K17815 EXO5; exonuclease V [EC:3.1.-.-]
K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
K12862 PLRG1; pleiotropic regulator 1
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
     03029 Mitochondrial biogenesis [BR:sce03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

[ KO | BRITE | KEGG2 | KEGG ]
Last updated: May 10, 2024