Pan troglodytes

Pan troglodytes

Scientific Name	Pan troglodytes [TAX:9598]
Lineage	cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan
DBLINKS	KEGG GENOME: T01005

Known viruses (58)

Scientific Name	Chikungunya virus [TAX:37124]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus; Alphavirus chikungunya
RefSeq	NC_004162 Chikungunya virus, complete genome.
KEGG DISEASE	H01540 Chikungunya fever
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_004162 KEGG GENOME: T40026 ICTV: 202305087 ViralZone: family, genus

Scientific Name	Chimpanzee adenovirus Y25 [TAX:1123958]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus exoticum; Human mastadenovirus E
RefSeq	NC_017825 Chimpanzee adenovirus Y25, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_017825 ICTV: 202302426 ViralZone: genus, family

Scientific Name	Chimpanzee associated porprismacovirus 1 [TAX:2170109]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; Porprismacovirus chimas1
RefSeq	NC_039068 Chimpanzee associated porprismacovirus 1 isolate DP152, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_039068 ICTV: 202305970 ViralZone: family

Scientific Name	Chimpanzee associated porprismacovirus 2 [TAX:2170110]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; Porprismacovirus chimas2
RefSeq	NC_039069 Chimpanzee associated porprismacovirus 2 isolate GM495, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_039069 ICTV: 202305971 ViralZone: family

Scientific Name	Chimpanzee herpesvirus strain 105640 [TAX:332937]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Alphaherpesvirinae; Simplexvirus; Simplexvirus paninealpha3; Panine alphaherpesvirus 3
RefSeq	NC_023677 Chimpanzee alpha-1 herpesvirus strain 105640, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_023677 ICTV: 202301434 ViralZone: genus, family

Scientific Name	Chimpanzee stool avian-like circovirus Chimp17 [TAX:743290]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus impundu
RefSeq	NC_038391 Chimpanzee stool avian-like circovirus Chimp17, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 39143430
Authors	Varsani A, Harrach B, Roumagnac P, Benkő M, Breitbart M, Delwart E, Franzo G, Kazlauskas D, Rosario K, Segalés J, Dunay E, Rukundo J, Goldberg TL, Fehér E, Kaszab E, Bányai K, Krupovic M
Title	2024 taxonomy update for the family Circoviridae.
Journal	Arch Virol. 2024 Aug 14;169(9):176.
DBLINKS	KEGG BRITE: NC_038391 ICTV: 202302915 ViralZone: genus, family

Scientific Name	Common chimpanzee papillomavirus 1 [TAX:66261]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; unclassified Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Alphapapillomavirus; Alphapapillomavirus 10
GenBank	AF020905 Common chimpanzee papillomavirus 1, complete genome.
Evidence	Literature
Reference	Bonnez, W. (2009). Papillomavirus. In Clinical Virology, Third Edition (pp. 603-644). American Society of Microbiology.
DBLINKS	ViralZone: family, genus

Scientific Name	Cyclovirus Chimp11 [TAX:742920]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; Cyclovirus sokwe; Chimpanzee associated cyclovirus 1
RefSeq	NC_038407 Cyclovirus Chimp11, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 20007276
Authors	Li L, Kapoor A, Slikas B, Bamidele OS, Wang C, Shaukat S, Masroor MA, Wilson ML, Ndjango JB, Peeters M, Gross-Camp ND, Muller MN, Hahn BH, Wolfe ND, Triki H, Bartkus J, Zaidi SZ, Delwart E
Title	Multiple diverse circoviruses infect farm animals and are commonly found in human and chimpanzee feces.
Journal	J Virol. 2010 Feb;84(4):1674-82.
DBLINKS	KEGG BRITE: NC_038407 ICTV: 202302949 ViralZone: genus, family

Scientific Name	Cyclovirus Chimp12 [TAX:742921]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; unclassified Cyclovirus
GenBank	GQ404850 Cyclovirus Chimp12, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 20007276
Authors	Li L, Kapoor A, Slikas B, Bamidele OS, Wang C, Shaukat S, Masroor MA, Wilson ML, Ndjango JB, Peeters M, Gross-Camp ND, Muller MN, Hahn BH, Wolfe ND, Triki H, Bartkus J, Zaidi SZ, Delwart E
Title	Multiple diverse circoviruses infect farm animals and are commonly found in human and chimpanzee feces.
Journal	J Virol. 2010 Feb;84(4):1674-82.
DBLINKS	ViralZone: genus, family

Scientific Name	Cyclovirus PK5034 [TAX:742916]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; Cyclovirus homa; Human associated cyclovirus 5
RefSeq	NC_038415 Cyclovirus PK5034, complete genome.
Evidence	Literature
Reference	PMID: 20007276
Authors	Li L, Kapoor A, Slikas B, Bamidele OS, Wang C, Shaukat S, Masroor MA, Wilson ML, Ndjango JB, Peeters M, Gross-Camp ND, Muller MN, Hahn BH, Wolfe ND, Triki H, Bartkus J, Zaidi SZ, Delwart E
Title	Multiple diverse circoviruses infect farm animals and are commonly found in human and chimpanzee feces.
Journal	J Virol. 2010 Feb;84(4):1674-82.
DBLINKS	KEGG BRITE: NC_038415 ICTV: 202302966 ViralZone: genus, family

Scientific Name	Gorilla anellovirus [TAX:1743411]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Commensaviricota; Cardeaviricetes; Sanitavirales; Anelloviridae; Omegatorquevirus; Omegatorquevirus hominid1
RefSeq	NC_030650 Gorilla anellovirus isolate GorF ORF2 and ORF1 genes, complete cds; and nonfunctional ORF3 gene, complete sequence.
Evidence	Literature
Reference	PMID: 26547037
Authors	Hrazdilová K, Slaninková E, Brožová K, Modrý D, Vodička R, Celer V
Title	New species of Torque Teno miniviruses infecting gorillas and chimpanzees.
Journal	Virology. 2016 Jan;487:207-14.
DBLINKS	KEGG BRITE: NC_030650 ICTV: 202309438 ViralZone: family

Scientific Name	Hepatitis B virus [TAX:10407]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Blubervirales; Hepadnaviridae; Orthohepadnavirus; Orthohepadnavirus hominoidei
RefSeq	NC_003977 Hepatitis B virus (strain ayw) genome.
KEGG DISEASE	H00412 Hepatitis B; Hepatitis B virus (HBV) infection
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_003977 KEGG GENOME: T40004 ICTV: 202303653 ViralZone: genus, family

Scientific Name	Hepatitis B virus subtype adr [TAX:106820]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Blubervirales; Hepadnaviridae; Orthohepadnavirus; Orthohepadnavirus hominoidei; Hepatitis B virus
GenBank	AB176642 Hepatitis B virus subtype ADR DNA, complete genome, isolate:HBV-115.
Evidence	UniProt
DBLINKS	ViralZone: genus, family

Scientific Name	Hepatitis C virus genotype 2 [TAX:40271]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Hepacivirus; Hepacivirus hominis
RefSeq	NC_009823 Hepatitis C virus genotype 2, complete genome.
Evidence	Literature
Reference	PMID: 10489358
Authors	Yanagi M, Purcell RH, Emerson SU, Bukh J
Title	Hepatitis C virus: an infectious molecular clone of a second major genotype (2a) and lack of viability of intertypic 1a and 2a chimeras.
Journal	Virology. 1999 Sep 15;262(1):250-63.
DBLINKS	KEGG BRITE: NC_009823 ViralZone: family

Scientific Name	Hepatitis delta virus [TAX:12475]
Lineage	Viruses; Ribozyviria; Ribozyviria incertae sedis; Kolmioviridae; Deltavirus; Deltavirus italiense
RefSeq	NC_001653 Hepatitis delta virus, complete genome.
KEGG DISEASE	H00414 Hepatitis D; Hepatitis D virus (HDV) infection; Hepatitis delta virus infection
Evidence	Literature
Reference	PMID: 3184270
Authors	Kuo MY, Sharmeen L, Dinter-Gottlieb G, Taylor J
Title	Characterization of self-cleaving RNA sequences on the genome and antigenome of human hepatitis delta virus.
Journal	J Virol. 1988 Dec;62(12):4439-44.
Evidence	Literature
Reference	PMID: 3627276
Authors	Makino S, Chang MF, Shieh CK, Kamahora T, Vannier DM, Govindarajan S, Lai MM
Title	Molecular cloning and sequencing of a human hepatitis delta (delta) virus RNA.
Journal	Nature. 1987 Sep 24-30;329(6137):343-6.
DBLINKS	KEGG BRITE: NC_001653 KEGG GENOME: T40085 ViralZone: family

Scientific Name	Hepatovirus A [TAX:12092]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Heptrevirinae; Hepatovirus; Hepatovirus ahepa
RefSeq	NC_001489 Hepatitis A virus, complete genome.
KEGG DISEASE	H00411 Hepatitis A; Hepatitis A virus (HAV) infection
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001489 KEGG GENOME: T40068 ICTV: 202302003 ViralZone: genus, family

Scientific Name	Human associated cyclovirus 1 [TAX:2038719]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; Cyclovirus maanav
GenBank	GQ404847 Human associated cyclovirus 1 isolate PK5510, complete genome.
Evidence	Literature
Reference	PMID: 20007276
Authors	Li L, Kapoor A, Slikas B, Bamidele OS, Wang C, Shaukat S, Masroor MA, Wilson ML, Ndjango JB, Peeters M, Gross-Camp ND, Muller MN, Hahn BH, Wolfe ND, Triki H, Bartkus J, Zaidi SZ, Delwart E
Title	Multiple diverse circoviruses infect farm animals and are commonly found in human and chimpanzee feces.
Journal	J Virol. 2010 Feb;84(4):1674-82.
DBLINKS	ViralZone: genus, family

Scientific Name	Human associated cyclovirus 2 [TAX:2038720]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; Cyclovirus insaan
GenBank	GQ404844 Human associated cyclovirus 2 isolate PK5006, complete genome.
Evidence	Literature
Reference	PMID: 20007276
Authors	Li L, Kapoor A, Slikas B, Bamidele OS, Wang C, Shaukat S, Masroor MA, Wilson ML, Ndjango JB, Peeters M, Gross-Camp ND, Muller MN, Hahn BH, Wolfe ND, Triki H, Bartkus J, Zaidi SZ, Delwart E
Title	Multiple diverse circoviruses infect farm animals and are commonly found in human and chimpanzee feces.
Journal	J Virol. 2010 Feb;84(4):1674-82.
DBLINKS	ViralZone: genus, family

Scientific Name	Human associated cyclovirus 3 [TAX:2038721]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; Cyclovirus manukha
GenBank	GQ404846 Human associated cyclovirus 3 isolate PK5222, complete genome.
Evidence	Literature
Reference	PMID: 20007276
Authors	Li L, Kapoor A, Slikas B, Bamidele OS, Wang C, Shaukat S, Masroor MA, Wilson ML, Ndjango JB, Peeters M, Gross-Camp ND, Muller MN, Hahn BH, Wolfe ND, Triki H, Bartkus J, Zaidi SZ, Delwart E
Title	Multiple diverse circoviruses infect farm animals and are commonly found in human and chimpanzee feces.
Journal	J Virol. 2010 Feb;84(4):1674-82.
DBLINKS	ViralZone: genus, family

Scientific Name	Human associated cyclovirus 4 [TAX:2038722]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; Cyclovirus bashri
GenBank	GQ404857 Human associated cyclovirus 4 isolate TN25, complete genome.
Evidence	Literature
Reference	PMID: 20007276
Authors	Li L, Kapoor A, Slikas B, Bamidele OS, Wang C, Shaukat S, Masroor MA, Wilson ML, Ndjango JB, Peeters M, Gross-Camp ND, Muller MN, Hahn BH, Wolfe ND, Triki H, Bartkus J, Zaidi SZ, Delwart E
Title	Multiple diverse circoviruses infect farm animals and are commonly found in human and chimpanzee feces.
Journal	J Virol. 2010 Feb;84(4):1674-82.
DBLINKS	ViralZone: genus, family

Scientific Name	Human associated cyclovirus 5 [TAX:2038723]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; Cyclovirus homa
GenBank	GQ404845 Human associated cyclovirus 5 isolate PK5034, complete genome.
Evidence	Literature
Reference	PMID: 20007276
Authors	Li L, Kapoor A, Slikas B, Bamidele OS, Wang C, Shaukat S, Masroor MA, Wilson ML, Ndjango JB, Peeters M, Gross-Camp ND, Muller MN, Hahn BH, Wolfe ND, Triki H, Bartkus J, Zaidi SZ, Delwart E
Title	Multiple diverse circoviruses infect farm animals and are commonly found in human and chimpanzee feces.
Journal	J Virol. 2010 Feb;84(4):1674-82.
DBLINKS	ViralZone: genus, family

Scientific Name	Human associated cyclovirus 6 [TAX:2038724]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; Cyclovirus mmadu
GenBank	GQ404854 Human associated cyclovirus 6 isolate NG12, complete genome.
Evidence	Literature
Reference	PMID: 20007276
Authors	Li L, Kapoor A, Slikas B, Bamidele OS, Wang C, Shaukat S, Masroor MA, Wilson ML, Ndjango JB, Peeters M, Gross-Camp ND, Muller MN, Hahn BH, Wolfe ND, Triki H, Bartkus J, Zaidi SZ, Delwart E
Title	Multiple diverse circoviruses infect farm animals and are commonly found in human and chimpanzee feces.
Journal	J Virol. 2010 Feb;84(4):1674-82.
DBLINKS	ViralZone: genus, family

Scientific Name	Human associated cyclovirus 7 [TAX:2038725]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; Cyclovirus mutum
GenBank	GQ404855 Human associated cyclovirus 7 isolate NG14, complete genome.
Evidence	Literature
Reference	PMID: 20007276
Authors	Li L, Kapoor A, Slikas B, Bamidele OS, Wang C, Shaukat S, Masroor MA, Wilson ML, Ndjango JB, Peeters M, Gross-Camp ND, Muller MN, Hahn BH, Wolfe ND, Triki H, Bartkus J, Zaidi SZ, Delwart E
Title	Multiple diverse circoviruses infect farm animals and are commonly found in human and chimpanzee feces.
Journal	J Virol. 2010 Feb;84(4):1674-82.
DBLINKS	ViralZone: genus, family

Scientific Name	Human associated porprismacovirus 2 [TAX:2170114]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; Porprismacovirus humas2
RefSeq	NC_026318 Human associated porprismacovirus 2 isolate SF2, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_026318 ICTV: 202305975 ViralZone: family

Scientific Name	Human foamy virus [TAX:11641]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Spumaretrovirinae; unclassified Spumaretrovirinae; Simian foamy virus
GenBank	Y07725 Human foamy virus proviral DNA, complete genome HFV.
Evidence	Literature
Reference	PMID: 9143272
Authors	Schmidt M, Herchenröder O, Heeney J, Rethwilm A
Title	Long terminal repeat U3 length polymorphism of human foamy virus.
Journal	Virology. 1997 Apr 14;230(2):167-78.
Comment	Culture cell line: BHK-21, MRC-5, KMST6, C8166-45, H9, human/chimpanzee PBMC cells
DBLINKS	ViralZone: family

Scientific Name	Panine betaherpesvirus 2 [TAX:188763]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Betaherpesvirinae; Cytomegalovirus; Cytomegalovirus paninebeta2
RefSeq	NC_003521 Panine herpesvirus 2 strain Heberling, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_003521 ICTV: 202301464 ViralZone: family, genus

Scientific Name	Paslahepevirus balayani [TAX:1678143]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Hepelivirales; Hepeviridae; Orthohepevirinae; Paslahepevirus
RefSeq	NC_074955 Paslahepevirus balayani nonstructural protein and structural viral protein genes, complete cds. NC_076565 Paslahepevirus balayani isolate AlgSwe2012, partial genome. NC_076592 Paslahepevirus balayani isolate little egret/kocsag02/2014/HUN, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_074955 NC_076565 NC_076592 ICTV: 202313887, 202313885, 202303665 ViralZone: genus, family

Scientific Name	Salivirus CH [TAX:1330996]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Kodimesavirinae; Salivirus; Salivirus aklasse; Salivirus A
GenBank	JN379039 Salivirus CH, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Salivirus NG-J1 [TAX:651733]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Kodimesavirinae; Salivirus; Salivirus aklasse; Salivirus A
RefSeq	NC_012957 Salivirus NG-J1, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_012957 ICTV: 202302055 ViralZone: genus, family

Scientific Name	simian adenovirus 21 [TAX:198503]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus blackbeardi; Human mastadenovirus B
RefSeq	AC_000010 Simian adenovirus 21, complete genome.
Evidence	Literature
Reference	PMID: 16894185
Authors	Roy S, Zhi Y, Kobinger GP, Figueredo J, Calcedo R, Miller JR, Feldmann H, Wilson JM
Title	Generation of an adenoviral vaccine vector based on simian adenovirus 21.
Journal	J Gen Virol. 2006 Sep;87(Pt 9):2477-85.
DBLINKS	KEGG BRITE: AC_000010 ViralZone: genus, family

Scientific Name	Simian adenovirus 25 [TAX:175567]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus exoticum; Human mastadenovirus E
RefSeq	AC_000011 Simian adenovirus 25, complete genome.
DBLINKS	KEGG BRITE: AC_000011 ViralZone: genus, family

Scientific Name	Simian adenovirus 25.2 [TAX:585082]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus exoticum; Human mastadenovirus E; Simian adenovirus 25
GenBank	FJ025918 Simian adenovirus 25.2, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	Simian adenovirus 26 [TAX:585060]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus exoticum; Human mastadenovirus E
GenBank	FJ025923 Simian adenovirus 26, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	simian adenovirus 27.1 [TAX:585083]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus blackbeardi; Human mastadenovirus B
GenBank	FJ025909 Simian adenovirus 27.1, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	simian adenovirus 28.1 [TAX:585085]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus blackbeardi; Human mastadenovirus B
GenBank	FJ025914 Simian adenovirus 28.1, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	simian adenovirus 29 [TAX:585063]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus blackbeardi; Human mastadenovirus B
GenBank	FJ025916 Simian adenovirus 29, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	Simian adenovirus 30 [TAX:585064]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus exoticum; Human mastadenovirus E
GenBank	FJ025920 Simian adenovirus 30, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ICTV: 202302426 ViralZone: genus, family

Scientific Name	Simian adenovirus 31.1 [TAX:585087]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus caesari; Human mastadenovirus C
GenBank	FJ025906 Simian adenovirus 31.1, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	Simian adenovirus 31.2 [TAX:585088]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus caesari; Human mastadenovirus C
GenBank	FJ025904 Simian adenovirus 31.2, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	simian adenovirus 32 [TAX:585066]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus blackbeardi; Human mastadenovirus B
GenBank	FJ025911 Simian adenovirus 32, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	simian adenovirus 33 [TAX:585067]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus blackbeardi; Human mastadenovirus B
GenBank	FJ025908 Simian adenovirus 33, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	Simian adenovirus 34 [TAX:585068]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus caesari; Human mastadenovirus C
GenBank	FJ025905 Simian adenovirus 34, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	simian adenovirus 35.1 [TAX:585089]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus blackbeardi; Human mastadenovirus B
GenBank	FJ025912 Simian adenovirus 35.1, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	Simian adenovirus 36 [TAX:585070]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus exoticum; Human mastadenovirus E
GenBank	FJ025917 Simian adenovirus 36, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	Simian adenovirus 37.1 [TAX:585091]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus exoticum; Human mastadenovirus E; Simian adenovirus 37
GenBank	FJ025921 Simian adenovirus 37.1, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	Simian adenovirus 38 [TAX:585072]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus exoticum; Human mastadenovirus E
GenBank	FJ025922 Simian adenovirus 38, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	Simian adenovirus 39 [TAX:585073]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus exoticum; Human mastadenovirus E
GenBank	FJ025924 Simian adenovirus 39, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	Simian adenovirus 40.1 [TAX:585093]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus caesari; Human mastadenovirus C
GenBank	FJ025907 Simian adenovirus 40.1, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	Simian adenovirus 40.2 [TAX:585094]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Polisuviricotina; Pharingeaviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus caesari; Human mastadenovirus C
GenBank	FJ025926 Simian adenovirus 40.2, complete genome.
Evidence	Literature
Reference	PMID: 19578438
Authors	Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
Title	Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
Journal	PLoS Pathog. 2009 Jul;5(7):e1000503.
DBLINKS	ViralZone: genus, family

Scientific Name	Simian immunodeficiency virus [TAX:11723]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; unclassified Orthoretrovirinae; Lentivirus; Lentivirus simimdef
RefSeq	NC_001549 Simian immunodeficiency virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001549 ICTV: 202305034 ViralZone: family, genus

Scientific Name	simian pegivirus-chimpanzee [TAX:2849774]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pegivirus; Pegivirus hominis
GenBank	AF070476 Simian pegivirus-chimpanzee, complete genome.
Evidence	Literature
Reference	PMID: 9700632
Authors	Birkenmeyer LG, Desai SM, Muerhoff AS, Leary TP, Simons JN, Montes CC, Mushahwar IK
Title	Isolation of a GB virus-related genome from a chimpanzee.
Journal	J Med Virol. 1998 Sep;56(1):44-51.
Comment	note="GBV-Ctro"
DBLINKS	ICTV: 202303142 ViralZone: family, genus

Scientific Name	Torque teno midi virus 15 [TAX:2065056]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Commensaviricota; Cardeaviricetes; Sanitavirales; Anelloviridae; Gammatorquevirus; Gammatorquevirus homidi15
RefSeq	NC_038362 Torque teno midi virus 15 DNA, complete genome, isolate: Pt-TTMDV210.
Evidence	Literature
Reference	PMID: 19141443
Authors	Ninomiya M, Takahashi M, Hoshino Y, Ichiyama K, Simmonds P, Okamoto H
Title	Analysis of the entire genomes of torque teno midi virus variants in chimpanzees: infrequent cross-species infection between humans and chimpanzees.
Journal	J Gen Virol. 2009 Feb;90(Pt 2):347-358.
DBLINKS	KEGG BRITE: NC_038362 ICTV: 202302552 ViralZone: genus, family

Scientific Name	Torque teno mini virus 4 [TAX:687372]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Commensaviricota; Cardeaviricetes; Sanitavirales; Anelloviridae; Betatorquevirus; Betatorquevirus homini4
RefSeq	NC_014090 Torque teno mini virus 4, complete genome.
Evidence	Literature
Reference	PMID: 11080484
Authors	Okamoto H, Nishizawa T, Tawara A, Peng Y, Takahashi M, Kishimoto J, Tanaka T, Miyakawa Y, Mayumi M
Title	Species-specific TT viruses in humans and nonhuman primates and their phylogenetic relatedness.
Journal	Virology. 2000 Nov 25;277(2):368-78.
DBLINKS	KEGG BRITE: NC_014090 ICTV: 202302521 ViralZone: genus, family

Scientific Name	Torque teno virus 14 [TAX:687353]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Commensaviricota; Cardeaviricetes; Sanitavirales; Anelloviridae; Alphatorquevirus; Alphatorquevirus homin14
RefSeq	NC_014077 Torque teno virus 14, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_014077 ICTV: 202302501 ViralZone: genus, family

Scientific Name	Torque teno virus 2 [TAX:687341]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Commensaviricota; Cardeaviricetes; Sanitavirales; Anelloviridae; Alphatorquevirus; Alphatorquevirus homin2
RefSeq	NC_014480 Torque teno virus 2, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_014480 ICTV: 202302489 ViralZone: genus, family

Scientific Name	Torque teno virus 23 [TAX:687362]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Commensaviricota; Cardeaviricetes; Sanitavirales; Anelloviridae; Alphatorquevirus; Alphatorquevirus homin24
RefSeq	NC_038342 Torque teno virus 23 ORF2, ORF1 genes, complete cds, isolate: s-TTV CH65-2.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_038342 ViralZone: genus, family

Scientific Name	Torque teno virus 4 [TAX:687343]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Commensaviricota; Cardeaviricetes; Sanitavirales; Anelloviridae; Alphatorquevirus; Alphatorquevirus homin4
RefSeq	NC_014069 Torque teno virus 4, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 11080484
Authors	Okamoto H, Nishizawa T, Tawara A, Peng Y, Takahashi M, Kishimoto J, Tanaka T, Miyakawa Y, Mayumi M
Title	Species-specific TT viruses in humans and nonhuman primates and their phylogenetic relatedness.
Journal	Virology. 2000 Nov 25;277(2):368-78.
Comment	isolation_source="chimpanzee"
DBLINKS	KEGG BRITE: NC_014069 ICTV: 202302491 ViralZone: genus, family

Scientific Name	Western chimpanzee simian foamy virus [TAX:2170203]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Spumaretrovirinae; Simiispumavirus; Simiispumavirus pantrover
RefSeq	NC_001364 Western chimpanzee simian foamy virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001364 ICTV: 202305941 ViralZone: genus, family