KEGG Orthology (KO)

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 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
     03020 RNA polymerase [PATH:ko03020]
       K03043  rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
       K13797  rpoBC; DNA-directed RNA polymerase subunit beta-beta' [EC:2.7.7.6]
       K03046  rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
       K03040  rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
       K03060  rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
       K03048  rpoE; DNA-directed RNA polymerase subunit delta
       K03044  rpoB1; DNA-directed RNA polymerase subunit B' [EC:2.7.7.6]
       K03045  rpoB2; DNA-directed RNA polymerase subunit B" [EC:2.7.7.6]
       K13798  rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
       K03041  rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
       K03042  rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
       K03047  rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
       K03056  rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
       K03049  rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
       K03051  rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
       K03052  rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6]
       K03053  rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
       K03055  rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
       K03058  rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
       K03059  rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
       K00960  rpo13; DNA-directed RNA polymerase subunit 13 [EC:2.7.7.6]
       K25274  RPO132; Poxviridae DNA-directed RNA polymerase 133 kDa subunit [EC:2.7.7.6]
       K25273  RPO147; Poxviridae DNA-directed RNA polymerase 147 kDa subunit [EC:2.7.7.6]
       K25278  RPO7; Poxviridae DNA-directed RNA polymerase 7 kDa subunit [EC:2.7.7.6]
       K25276  RPO35; Poxviridae DNA-directed RNA polymerase 35 kDa subunit [EC:2.7.7.6]
       K25275  RPO30; Poxviridae DNA-directed RNA polymerase 30 kDa subunit [EC:2.7.7.6]
       K25277  RPO22; Poxviridae DNA-directed RNA polymerase 22 kDa subunit [EC:2.7.7.6]
       K25279  RPO19; Poxviridae DNA-directed RNA polymerase 19 kDa subunit [EC:2.7.7.6]
       K21081  RPO18; Poxviridae DNA-directed RNA polymerase 18 kDa subunit [EC:2.7.7.6]
       K03010  RPB2, POLR2B; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
       K03006  RPB1, POLR2A; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
       K03011  RPB3, POLR2C; DNA-directed RNA polymerase II subunit RPB3
       K03008  RPB11, POLR2J; DNA-directed RNA polymerase II subunit RPB11
       K03012  RPB4, POLR2D; DNA-directed RNA polymerase II subunit RPB4
       K03015  RPB7, POLR2G; DNA-directed RNA polymerase II subunit RPB7
       K03017  RPB9, POLR2I; DNA-directed RNA polymerase II subunit RPB9
       K21987  POLR2M, GRINL1A; DNA-directed RNA polymerase II subunit GRINL1A
       K03021  RPC2, POLR3B; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
       K03018  RPC1, POLR3A; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
       K03020  RPAC2, RPC19, POLR1D; DNA-directed RNA polymerases I and III subunit RPAC2
       K03027  RPAC1, RPC40, POLR1C; DNA-directed RNA polymerases I and III subunit RPAC1
       K03023  RPC3, POLR3C; DNA-directed RNA polymerase III subunit RPC3
       K03026  RPC4, POLR3D; DNA-directed RNA polymerase III subunit RPC4
       K14721  RPC5, POLR3E; DNA-directed RNA polymerase III subunit RPC5
       K03025  RPC6, POLR3F; DNA-directed RNA polymerase III subunit RPC6
       K03024  RPC7, POLR3G; DNA-directed RNA polymerase III subunit RPC7
       K03022  RPC8, POLR3H; DNA-directed RNA polymerase III subunit RPC8
       K25304  RPC9, CRCP; DNA-directed RNA polymerase III subunit RPC9
       K03019  RPC11, POLR3K; DNA-directed RNA polymerase III subunit RPC11
       K03002  RPA2, POLR1B; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
       K02999  RPA1, POLR1A; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
       K03000  RPA12, POLR1H, ZNRD1; DNA-directed RNA polymerase I subunit RPA12
       K03001  RPA14; DNA-directed RNA polymerase I subunit RPA14
       K03003  RPA34; DNA-directed RNA polymerase I subunit RPA34
       K25436  POLR1G; DNA-directed RNA polymerase I subunit RPA34
       K03004  RPA43, POLR1F, TWISTNB; DNA-directed RNA polymerase I subunit RPA43
       K03005  RPA49, POLR1E; DNA-directed RNA polymerase I subunit RPA49
       K03013  RPABC1, RPB5, POLR2E; DNA-directed RNA polymerases I, II, and III subunit RPABC1
       K03014  RPABC2, RPB6, POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2
       K03016  RPABC3, RPB8, POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3
       K03009  RPABC4, RPB12, POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4
       K03007  RPABC5, RPB10, POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5
       K16250  NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
       K16251  NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
       K16252  NRPD2, NRPE2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
       K16253  NRPD7, NRPE7; DNA-directed RNA polymerase IV and V subunit 7
     03022 Basal transcription factors [PATH:ko03022]
     03040 Spliceosome [PATH:ko03040]
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:ko03030]
     03410 Base excision repair [PATH:ko03410]
     03420 Nucleotide excision repair [PATH:ko03420]
       K03723  mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
       K03701  uvrA; excinuclease ABC subunit A
       K03702  uvrB; excinuclease ABC subunit B
       K03703  uvrC; excinuclease ABC subunit C
       K03657  uvrD, pcrA; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
       K02335  polA; DNA polymerase I [EC:2.7.7.7]
       K01972  E6.5.1.2, ligA, ligB; DNA ligase (NAD+) [EC:6.5.1.2]
       K03868  RBX1, ROC1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
       K10609  CUL4; cullin 4
       K10610  DDB1; DNA damage-binding protein 1
       K10140  DDB2; DNA damage-binding protein 2
       K10838  XPC; xeroderma pigmentosum group C-complementing protein
       K10839  RAD23, HR23; UV excision repair protein RAD23
       K10840  CETN2; centrin-2
       K10570  ERCC8, CKN1, CSA; DNA excision repair protein ERCC-8
       K10841  ERCC6, CSB, RAD26; DNA excision repair protein ERCC-6
       K23720  UVSSA; UV-stimulated scaffold protein A
       K03006  RPB1, POLR2A; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
       K03010  RPB2, POLR2B; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
       K03011  RPB3, POLR2C; DNA-directed RNA polymerase II subunit RPB3
       K03012  RPB4, POLR2D; DNA-directed RNA polymerase II subunit RPB4
       K03013  RPABC1, RPB5, POLR2E; DNA-directed RNA polymerases I, II, and III subunit RPABC1
       K03014  RPABC2, RPB6, POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2
       K03015  RPB7, POLR2G; DNA-directed RNA polymerase II subunit RPB7
       K03016  RPABC3, RPB8, POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3
       K03017  RPB9, POLR2I; DNA-directed RNA polymerase II subunit RPB9
       K03007  RPABC5, RPB10, POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5
       K03009  RPABC4, RPB12, POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4
       K03008  RPB11, POLR2J; DNA-directed RNA polymerase II subunit RPB11
       K21987  POLR2M, GRINL1A; DNA-directed RNA polymerase II subunit GRINL1A
       K02202  CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
       K10842  MNAT1; CDK-activating kinase assembly factor MAT1
       K06634  CCNH; cyclin H
       K10843  ERCC3, XPB; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
       K10844  ERCC2, XPD; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
       K10845  TTDA, GTF2H5, TFB5; TFIIH basal transcription factor complex TTD-A subunit
       K03141  TFIIH1, GTF2H1, TFB1; transcription initiation factor TFIIH subunit 1
       K03142  TFIIH2, GTF2H2, SSL1; transcription initiation factor TFIIH subunit 2
       K03143  TFIIH3, GTF2H3, TFB4; transcription initiation factor TFIIH subunit 3
       K03144  TFIIH4, GTF2H4, TFB2; transcription initiation factor TFIIH subunit 4
       K10846  ERCC5, XPG, RAD2; DNA excision repair protein ERCC-5
       K10847  XPA; DNA-repair protein complementing XP-A cells
       K07466  RFA1, RPA1, rpa; replication factor A1
       K10739  RFA2, RPA2; replication factor A2
       K10740  RPA3; replication factor A3
       K10741  RPA4; replication factor A4
       K10848  ERCC4, XPF; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
       K10849  ERCC1; DNA excision repair protein ERCC-1
       K02327  POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
       K02328  POLD2; DNA polymerase delta subunit 2
       K03504  POLD3; DNA polymerase delta subunit 3
       K03505  POLD4; DNA polymerase delta subunit 4
       K02324  POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
       K02325  POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
       K02326  POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
       K03506  POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
       K04802  PCNA; proliferating cell nuclear antigen
       K10754  RFC1; replication factor C subunit 1
       K10755  RFC2_4; replication factor C subunit 2/4
       K10756  RFC3_5; replication factor C subunit 3/5
       K10747  LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
     03430 Mismatch repair [PATH:ko03430]
     03440 Homologous recombination [PATH:ko03440]
     03450 Non-homologous end-joining [PATH:ko03450]
     03460 Fanconi anemia pathway [PATH:ko03460]
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
   09161 Cancer: overview
 
   09162 Cancer: specific types
 
   09172 Infectious disease: viral
 
   09171 Infectious disease: bacterial
 
   09174 Infectious disease: parasitic
 
   09163 Immune disease
 
   09164 Neurodegenerative disease
     05010 Alzheimer disease [PATH:ko05010]
     05012 Parkinson disease [PATH:ko05012]
     05014 Amyotrophic lateral sclerosis [PATH:ko05014]
     05016 Huntington disease [PATH:ko05016]
       K04644  CLTA, LCA; clathrin light chain A
       K04645  CLTB, LCB; clathrin light chain B
       K04646  CLTC; clathrin heavy chain
       K04559  HIP1; huntingtin interacting protein 1
       K11824  AP2A; AP-2 complex subunit alpha
       K11825  AP2B1; AP-2 complex subunit beta-1
       K11826  AP2M1; AP-2 complex subunit mu-1
       K11827  AP2S1; AP-2 complex subunit sigma-1
       K04533  HD; huntingtin
       K04648  DCTN1; dynactin 1
       K10424  DCTN2; dynactin 2
       K10425  DCTN3; dynactin 3
       K10426  DCTN4; dynactin 4
       K10427  DCTN5; dynactin 5
       K10428  DCTN6; dynactin 6
       K16575  ACTR1, ARP1; centractin
       K16576  ACTR10, ARP11; actin-related protein 10
       K04647  HAP1; huntingtin-associated protein 1
       K10408  DNAH; dynein axonemal heavy chain
       K10410  DNALI; dynein axonemal light intermediate chain 1
       K10409  DNAI1; dynein axonemal intermediate chain 1
       K11143  DNAI2; dynein axonemal intermediate chain 2
       K10411  DNAL1; dynein axonemal light chain 1
       K10412  DNAL4; dynein axonemal light chain 4
       K07374  TUBA; tubulin alpha
       K07375  TUBB; tubulin beta
       K04440  JNK; mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase) [EC:2.7.11.24]
       K10396  KIF5; kinesin family member 5
       K10407  KLC; kinesin light chain
       K04638  IFT57, HIPPI, ESRRBL1; intraflagellar transport protein 57
       K04398  CASP8; caspase 8 [EC:3.4.22.61]
       K02187  CASP3; caspase 3 [EC:3.4.22.56]
       K04604  GRM5; metabotropic glutamate receptor 5
       K04634  GNAQ; guanine nucleotide-binding protein G(q) subunit alpha
       K05858  PLCB; phosphatidylinositol phospholipase C, beta [EC:3.1.4.11]
       K04560  STX1A; syntaxin 1A
       K04849  CACNA1B, CAV2.2; voltage-dependent calcium channel N type alpha-1B
       K05208  GRIN1; glutamate receptor ionotropic, NMDA 1
       K05210  GRIN2B; glutamate receptor ionotropic, NMDA 2B
       K04958  ITPR1; inositol 1,4,5-triphosphate receptor type 1
       K11828  DLG4, PSD95; discs large protein 4
       K05197  GRIA1; glutamate receptor 1
       K05198  GRIA2; glutamate receptor 2
       K05199  GRIA3; glutamate receptor 3
       K05200  GRIA4; glutamate receptor 4
       K05625  TGM2; transglutaminase 2 [EC:2.3.2.13]
       K05614  SLC1A3, EAAT1; solute carrier family 1 (glial high affinity glutamate transporter), member 3
       K05613  SLC1A2, EAAT2; solute carrier family 1 (glial high affinity glutamate transporter), member 2
       K05003  KCNJ10, KIR4.1; potassium inwardly-rectifying channel subfamily J member 10
       K09222  REST; RE1-silencing transcription factor
       K11644  SIN3A; paired amphipathic helix protein Sin3a
       K11829  RCOR1, COREST; REST corepressor 1
       K06067  HDAC1_2; histone deacetylase 1/2 [EC:3.5.1.98]
       K03006  RPB1, POLR2A; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
       K03010  RPB2, POLR2B; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
       K03011  RPB3, POLR2C; DNA-directed RNA polymerase II subunit RPB3
       K03012  RPB4, POLR2D; DNA-directed RNA polymerase II subunit RPB4
       K03013  RPABC1, RPB5, POLR2E; DNA-directed RNA polymerases I, II, and III subunit RPABC1
       K03014  RPABC2, RPB6, POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2
       K03015  RPB7, POLR2G; DNA-directed RNA polymerase II subunit RPB7
       K03016  RPABC3, RPB8, POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3
       K03017  RPB9, POLR2I; DNA-directed RNA polymerase II subunit RPB9
       K03007  RPABC5, RPB10, POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5
       K03008  RPB11, POLR2J; DNA-directed RNA polymerase II subunit RPB11
       K03009  RPABC4, RPB12, POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4
       K04355  BDNF; brain-derived neurotrophic factor
       K04498  EP300, CREBBP, KAT3; E1A/CREB-binding protein [EC:2.3.1.48]
       K03129  TAF4; transcription initiation factor TFIID subunit 4
       K03120  TBP, tbp; transcription initiation factor TFIID TATA-box-binding protein
       K04684  SP1; transcription factor Sp1
       K05870  CREB1; cyclic AMP-responsive element-binding protein 1
       K09048  CREB3; cyclic AMP-responsive element-binding protein 3
       K09047  CREB5, CREBPA; cyclic AMP-responsive element-binding protein 5
       K07202  PPARGC1A, PGC1A; alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
       K08530  NR1C3, PPARG; peroxisome proliferator-activated receptor gamma
       K11830  TFAM, MTTFA; transcription factor A, mitochondrial
       K11831  NRF1; nuclear respiratory factor 1
       K04565  SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1]
       K04564  SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
       K00432  gpx, btuE, bsaA; glutathione peroxidase [EC:1.11.1.9]
       K08769  UCP1, SLC25A7; solute carrier family 25 (mitochondrial uncoupling protein), member 7
       K04451  TP53, P53; tumor protein p53
       K02159  BAX; apoptosis regulator BAX
       K10132  BBC3, PUMA; Bcl-2-binding component 3
       K03878  ND1; NADH-ubiquinone oxidoreductase chain 1 [EC:7.1.1.2]
       K03879  ND2; NADH-ubiquinone oxidoreductase chain 2 [EC:7.1.1.2]
       K03880  ND3; NADH-ubiquinone oxidoreductase chain 3 [EC:7.1.1.2]
       K03881  ND4; NADH-ubiquinone oxidoreductase chain 4 [EC:7.1.1.2]
       K03882  ND4L; NADH-ubiquinone oxidoreductase chain 4L [EC:7.1.1.2]
       K03883  ND5; NADH-ubiquinone oxidoreductase chain 5 [EC:7.1.1.2]
       K03884  ND6; NADH-ubiquinone oxidoreductase chain 6 [EC:7.1.1.2]
       K03942  NDUFV1; NADH dehydrogenase (ubiquinone) flavoprotein 1 [EC:7.1.1.2]
       K03943  NDUFV2; NADH dehydrogenase (ubiquinone) flavoprotein 2 [EC:7.1.1.2]
       K03944  NDUFV3; NADH dehydrogenase (ubiquinone) flavoprotein 3
       K03945  NDUFA1; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
       K03946  NDUFA2; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2
       K03947  NDUFA3; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 3
       K03948  NDUFA4; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 4
       K03949  NDUFA5; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5
       K03950  NDUFA6; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
       K03951  NDUFA7; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 7
       K03952  NDUFA8; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
       K03953  NDUFA9; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
       K03954  NDUFA10; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 10
       K03955  NDUFAB1; NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
       K03956  NDUFA11; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 11
       K11352  NDUFA12; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
       K11353  NDUFA13; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
       K03957  NDUFB1; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 1
       K03958  NDUFB2; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 2
       K03959  NDUFB3; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 3
       K03960  NDUFB4; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 4
       K03961  NDUFB5; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 5
       K03962  NDUFB6; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 6
       K03963  NDUFB7; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
       K03964  NDUFB8; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 8
       K03965  NDUFB9; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
       K03966  NDUFB10; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
       K11351  NDUFB11; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 11
       K03934  NDUFS1; NADH dehydrogenase (ubiquinone) Fe-S protein 1 [EC:7.1.1.2]
       K03935  NDUFS2; NADH dehydrogenase (ubiquinone) Fe-S protein 2 [EC:7.1.1.2]
       K03936  NDUFS3; NADH dehydrogenase (ubiquinone) Fe-S protein 3 [EC:7.1.1.2]
       K03937  NDUFS4; NADH dehydrogenase (ubiquinone) Fe-S protein 4
       K03938  NDUFS5; NADH dehydrogenase (ubiquinone) Fe-S protein 5
       K03939  NDUFS6; NADH dehydrogenase (ubiquinone) Fe-S protein 6
       K03940  NDUFS7; NADH dehydrogenase (ubiquinone) Fe-S protein 7 [EC:7.1.1.2]
       K03941  NDUFS8; NADH dehydrogenase (ubiquinone) Fe-S protein 8 [EC:7.1.1.2]
       K03967  NDUFC1; NADH dehydrogenase (ubiquinone) 1 subunit C1
       K03968  NDUFC2; NADH dehydrogenase (ubiquinone) 1 subunit C2
       K00234  SDHA, SDH1; succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
       K00235  SDHB, SDH2; succinate dehydrogenase (ubiquinone) iron-sulfur subunit [EC:1.3.5.1]
       K00236  SDHC, SDH3; succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
       K00237  SDHD, SDH4; succinate dehydrogenase (ubiquinone) membrane anchor subunit
       K00411  UQCRFS1, RIP1, petA; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
       K00412  CYTB, petB; ubiquinol-cytochrome c reductase cytochrome b subunit
       K00413  CYC1, CYT1, petC; ubiquinol-cytochrome c reductase cytochrome c1 subunit
       K00414  QCR1, UQCRC1; ubiquinol-cytochrome c reductase core subunit 1
       K00415  QCR2, UQCRC2; ubiquinol-cytochrome c reductase core subunit 2
       K00416  QCR6, UQCRH; ubiquinol-cytochrome c reductase subunit 6
       K00417  QCR7, UQCRB; ubiquinol-cytochrome c reductase subunit 7
       K00418  QCR8, UQCRQ; ubiquinol-cytochrome c reductase subunit 8
       K00419  QCR9, UCRC; ubiquinol-cytochrome c reductase subunit 9
       K00420  QCR10, UQCR; ubiquinol-cytochrome c reductase subunit 10
       K02262  COX3; cytochrome c oxidase subunit 3
       K02256  COX1; cytochrome c oxidase subunit 1 [EC:7.1.1.9]
       K02261  COX2; cytochrome c oxidase subunit 2
       K02263  COX4; cytochrome c oxidase subunit 4
       K02264  COX5A; cytochrome c oxidase subunit 5a
       K02265  COX5B; cytochrome c oxidase subunit 5b
       K02266  COX6A; cytochrome c oxidase subunit 6a
       K02267  COX6B; cytochrome c oxidase subunit 6b
       K02268  COX6C; cytochrome c oxidase subunit 6c
       K02270  COX7A; cytochrome c oxidase subunit 7a
       K02271  COX7B; cytochrome c oxidase subunit 7b
       K02272  COX7C; cytochrome c oxidase subunit 7c
       K02273  COX8; cytochrome c oxidase subunit 8
       K02132  ATPeF1A, ATP5A1, ATP1; F-type H+-transporting ATPase subunit alpha
       K02133  ATPeF1B, ATP5B, ATP2; F-type H+-transporting ATPase subunit beta [EC:7.1.2.2]
       K02136  ATPeF1G, ATP5C1, ATP3; F-type H+-transporting ATPase subunit gamma
       K02134  ATPeF1D, ATP5D, ATP16; F-type H+-transporting ATPase subunit delta
       K02135  ATPeF1E, ATP5E, ATP15; F-type H+-transporting ATPase subunit epsilon
       K02126  ATPeF0A, MTATP6, ATP6; F-type H+-transporting ATPase subunit a
       K02127  ATPeF0B, ATP5F1, ATP4; F-type H+-transporting ATPase subunit b
       K02128  ATPeF0C, ATP5G, ATP9; F-type H+-transporting ATPase subunit c
       K02138  ATPeF0D, ATP5H, ATP7; F-type H+-transporting ATPase subunit d
       K02137  ATPeF0O, ATP5O, ATP5; F-type H+-transporting ATPase subunit O
       K02131  ATPeF0F6, ATP5J; F-type H+-transporting ATPase subunit 6
       K02125  ATPeF08, MTATP8, ATP8; F-type H+-transporting ATPase subunit 8
       K05862  VDAC1; voltage-dependent anion channel protein 1
       K15040  VDAC2; voltage-dependent anion channel protein 2
       K15041  VDAC3; voltage-dependent anion channel protein 3
       K05863  SLC25A4S, ANT; solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
       K09565  PPIF; peptidyl-prolyl isomerase F (cyclophilin D) [EC:5.2.1.8]
       K08738  CYC; cytochrome c
       K02084  APAF1; apoptotic protease-activating factor
       K04399  CASP9; caspase 9 [EC:3.4.22.62]
       K02730  PSMA6; 20S proteasome subunit alpha 1 [EC:3.4.25.1]
       K02726  PSMA2; 20S proteasome subunit alpha 2 [EC:3.4.25.1]
       K02728  PSMA4; 20S proteasome subunit alpha 3 [EC:3.4.25.1]
       K02731  PSMA7; 20S proteasome subunit alpha 4 [EC:3.4.25.1]
       K02729  PSMA5; 20S proteasome subunit alpha 5 [EC:3.4.25.1]
       K02725  PSMA1; 20S proteasome subunit alpha 6 [EC:3.4.25.1]
       K02727  PSMA3; 20S proteasome subunit alpha 7 [EC:3.4.25.1]
       K02738  PSMB6; 20S proteasome subunit beta 1 [EC:3.4.25.1]
       K02739  PSMB7; 20S proteasome subunit beta 2 [EC:3.4.25.1]
       K02735  PSMB3; 20S proteasome subunit beta 3 [EC:3.4.25.1]
       K02734  PSMB2; 20S proteasome subunit beta 4 [EC:3.4.25.1]
       K02737  PSMB5; 20S proteasome subunit beta 5 [EC:3.4.25.1]
       K02732  PSMB1; 20S proteasome subunit beta 6 [EC:3.4.25.1]
       K02736  PSMB4; 20S proteasome subunit beta 7 [EC:3.4.25.1]
       K03061  PSMC2, RPT1; 26S proteasome regulatory subunit T1
       K03062  PSMC1, RPT2; 26S proteasome regulatory subunit T2
       K03063  PSMC4, RPT3; 26S proteasome regulatory subunit T3
       K03064  PSMC6, RPT4; 26S proteasome regulatory subunit T4
       K03065  PSMC3, RPT5; 26S proteasome regulatory subunit T5
       K03066  PSMC5, RPT6; 26S proteasome regulatory subunit T6
       K03028  PSMD2, RPN1; 26S proteasome regulatory subunit N1
       K03032  PSMD1, RPN2; 26S proteasome regulatory subunit N2
       K03033  PSMD3, RPN3; 26S proteasome regulatory subunit N3
       K06693  PSMD9, RPN4; 26S proteasome regulatory subunit N4
       K03035  PSMD12, RPN5; 26S proteasome regulatory subunit N5
       K03036  PSMD11, RPN6; 26S proteasome regulatory subunit N6
       K03037  PSMD6, RPN7; 26S proteasome regulatory subunit N7
       K03038  PSMD7, RPN8; 26S proteasome regulatory subunit N8
       K03039  PSMD13, RPN9; 26S proteasome regulatory subunit N9
       K03029  PSMD4, RPN10; 26S proteasome regulatory subunit N10
       K03030  PSMD14, RPN11, POH1; 26S proteasome regulatory subunit N11
       K03031  PSMD8, RPN12; 26S proteasome regulatory subunit N12
       K06691  RPN13; 26S proteasome regulatory subunit N13
       K10881  SHFM1, DSS1, RPN15; 26 proteasome complex subunit DSS1
       K04418  MAP3K10, MLK2; mitogen-activated protein kinase kinase kinase 10 [EC:2.7.11.25]
       K08852  ERN1; serine/threonine-protein kinase/endoribonuclease IRE1 [EC:2.7.11.1 3.1.26.-]
       K03173  TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
       K04426  MAP3K5, ASK1; mitogen-activated protein kinase kinase kinase 5 [EC:2.7.11.25]
       K04431  MAP2K7, MKK7; mitogen-activated protein kinase kinase 7 [EC:2.7.12.2]
       K07203  MTOR, FRAP, TOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1]
       K21357  ULK1; serine/threonine-protein kinase ULK1 [EC:2.7.11.1]
       K08269  ULK2, ATG1; serine/threonine-protein kinase ULK2 [EC:2.7.11.1]
       K19730  ATG101; autophagy-related protein 101
       K08331  ATG13; autophagy-related protein 13
       K17589  RB1CC1; RB1-inducible coiled-coil protein 1
       K17985  AMBRA1; activating molecule in BECN1-regulated autophagy protein 1
       K08334  BECN, VPS30, ATG6; beclin
       K08333  PIK3R4, VPS15; phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]
       K17889  ATG14L, ATG14; beclin 1-associated autophagy-related key regulator
       K21246  NRBF2; nuclear receptor-binding factor 2
       K00914  PIK3C3, VPS34; phosphatidylinositol 3-kinase [EC:2.7.1.137]
       K17906  ATG2; autophagy-related protein 2
       K17908  WIPI1_2, ATG18; autophagy-related protein 18
     05017 Spinocerebellar ataxia [PATH:ko05017]
     05020 Prion disease [PATH:ko05020]
     05022 Pathways of neurodegeneration - multiple diseases [PATH:ko05022]
 
   09165 Substance dependence
 
   09166 Cardiovascular disease
 
   09167 Endocrine and metabolic disease
 
   09175 Drug resistance: antimicrobial
 
   09176 Drug resistance: antineoplastic
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:ko03000]
     03021 Transcription machinery [BR:ko03021]
       K03006  RPB1, POLR2A; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
       K03010  RPB2, POLR2B; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
       K03011  RPB3, POLR2C; DNA-directed RNA polymerase II subunit RPB3
       K03008  RPB11, POLR2J; DNA-directed RNA polymerase II subunit RPB11
       K03012  RPB4, POLR2D; DNA-directed RNA polymerase II subunit RPB4
       K03015  RPB7, POLR2G; DNA-directed RNA polymerase II subunit RPB7
       K03017  RPB9, POLR2I; DNA-directed RNA polymerase II subunit RPB9
       K21987  POLR2M, GRINL1A; DNA-directed RNA polymerase II subunit GRINL1A
       K03013  RPABC1, RPB5, POLR2E; DNA-directed RNA polymerases I, II, and III subunit RPABC1
       K03014  RPABC2, RPB6, POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2
       K03016  RPABC3, RPB8, POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3
       K03009  RPABC4, RPB12, POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4
       K03007  RPABC5, RPB10, POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5
       K16250  NRPD1; DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
       K16251  NRPE1; DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
       K16252  NRPD2, NRPE2; DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
       K16253  NRPD7, NRPE7; DNA-directed RNA polymerase IV and V subunit 7
       K03122  TFIIA1, GTF2A1, TOA1; transcription initiation factor TFIIA large subunit
       K03123  TFIIA2, GTF2A2, TOA2; transcription initiation factor TFIIA small subunit
       K03124  TFIIB, GTF2B, SUA7, tfb; transcription initiation factor TFIIB
       K03120  TBP, tbp; transcription initiation factor TFIID TATA-box-binding protein
       K03125  TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
       K23358  TAF1; transcription initiation factor TFIID subunit 1, fungi type [EC:2.3.1.48]
       K03128  TAF2; transcription initiation factor TFIID subunit 2
       K14650  TAF3; transcription initiation factor TFIID subunit 3
       K03129  TAF4; transcription initiation factor TFIID subunit 4
       K03130  TAF5; transcription initiation factor TFIID subunit 5
       K03131  TAF6; transcription initiation factor TFIID subunit 6
       K03132  TAF7; transcription initiation factor TFIID subunit 7
       K14649  TAF8; transcription initiation factor TFIID subunit 8
       K14535  TAF9; transcription initiation factor TFIID subunit 9
       K03133  TAF9B, TAF9; transcription initiation factor TFIID subunit 9B
       K03134  TAF10; transcription initiation factor TFIID subunit 10
       K03135  TAF11; transcription initiation factor TFIID subunit 11
       K03126  TAF12; transcription initiation factor TFIID subunit 12
       K03127  TAF13; transcription initiation factor TFIID subunit 13
       K03140  TAF14; transcription initiation factor TFIID/TFIIF subunit
       K14651  TAF15, NPL3; transcription initiation factor TFIID subunit 15
       K03136  TFIIE1, GTF2E1, TFA1, tfe; transcription initiation factor TFIIE subunit alpha
       K03137  TFIIE2, GTF2E2, TFA2; transcription initiation factor TFIIE subunit beta
       K03138  TFIIF1, GTF2F1, TFG1; transcription initiation factor TFIIF subunit alpha
       K03139  TFIIF2, GTF2F2, TFG2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
       K03141  TFIIH1, GTF2H1, TFB1; transcription initiation factor TFIIH subunit 1
       K03142  TFIIH2, GTF2H2, SSL1; transcription initiation factor TFIIH subunit 2
       K03143  TFIIH3, GTF2H3, TFB4; transcription initiation factor TFIIH subunit 3
       K03144  TFIIH4, GTF2H4, TFB2; transcription initiation factor TFIIH subunit 4
       K10843  ERCC3, XPB; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
       K10844  ERCC2, XPD; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
       K10845  TTDA, GTF2H5, TFB5; TFIIH basal transcription factor complex TTD-A subunit
       K02202  CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
       K10842  MNAT1; CDK-activating kinase assembly factor MAT1
       K06634  CCNH; cyclin H
       K15128  MED6; mediator of RNA polymerase II transcription subunit 6
       K15129  MED8; mediator of RNA polymerase II transcription subunit 8
       K15130  MED8; mediator of RNA polymerase II transcription subunit 8, fungi type
       K15131  MED11; mediator of RNA polymerase II transcription subunit 11
       K15132  MED11; mediator of RNA polymerase II transcription subunit 11, fungi type
       K15133  MED17; mediator of RNA polymerase II transcription subunit 17
       K15134  SRB4, MED17; mediator of RNA polymerase II transcription subunit 17, fungi type
       K15135  MED18; mediator of RNA polymerase II transcription subunit 18
       K15136  SRB5, MED18; mediator of RNA polymerase II transcription subunit 18, fungi type
       K15137  MED19; mediator of RNA polymerase II transcription subunit 19
       K15138  ROX3, MED19; mediator of RNA polymerase II transcription subunit 19, fungi type
       K13528  MED20; mediator of RNA polymerase II transcription subunit 20
       K15139  MED22; mediator of RNA polymerase II transcription subunit 22
       K15140  SRB6, MED22; mediator of RNA polymerase II transcription subunit 22, fungi type
       K15141  MED28; mediator of RNA polymerase II transcription subunit 28
       K15142  MED29; mediator of RNA polymerase II transcription subunit 29
       K15143  MED30; mediator of RNA polymerase II transcription subunit 30
       K15144  MED1; mediator of RNA polymerase II transcription subunit 1
       K15145  MED1; mediator of RNA polymerase II transcription subunit 1, fungi type
       K15146  MED4; mediator of RNA polymerase II transcription subunit 4
       K15147  MED5, NUT1; mediator of RNA polymerase II transcription subunit 5
       K15148  MED7; mediator of RNA polymerase II transcription subunit 7
       K15149  MED9; mediator of RNA polymerase II transcription subunit 9
       K15150  CSE2, MED9; mediator of RNA polymerase II transcription subunit 9, fungi type
       K15151  MED10, NUT2; mediator of RNA polymerase II transcription subunit 10
       K15152  MED21, SRB7; mediator of RNA polymerase II transcription subunit 21
       K15153  MED31, SOH1; mediator of RNA polymerase II transcription subunit 31
       K15154  MED2; mediator of RNA polymerase II transcription subunit 2
       K15155  MED3, HRS1, PGD1; mediator of RNA polymerase II transcription subunit 3
       K15156  MED14, RGR1; mediator of RNA polymerase II transcription subunit 14
       K15157  MED15; mediator of RNA polymerase II transcription subunit 15
       K15158  GAL11, MED15; mediator of RNA polymerase II transcription subunit 15, fungi type
       K15159  MED16; mediator of RNA polymerase II transcription subunit 16
       K15160  SIN4, MED16; mediator of RNA polymerase II transcription subunit 16, fungi type
       K02208  CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
       K15161  CCNC, SSN8; cyclin-C
       K15162  MED12; mediator of RNA polymerase II transcription subunit 12
       K15163  SRB8, MED12; mediator of RNA polymerase II transcription subunit 12, fungi type
       K15164  MED13; mediator of RNA polymerase II transcription subunit 13
       K15165  SSN2, MED13; mediator of RNA polymerase II transcription subunit 13, fungi type
       K15166  MED23; mediator of RNA polymerase II transcription subunit 23
       K15167  MED24; mediator of RNA polymerase II transcription subunit 24
       K15168  MED25; mediator of RNA polymerase II transcription subunit 25
       K15169  MED26; mediator of RNA polymerase II transcription subunit 26
       K15170  MED27; mediator of RNA polymerase II transcription subunit 27
       K27471  MED32; mediator of RNA polymerase II transcription subunit 32
       K27472  MED33; mediator of RNA polymerase II transcription subunit 33
       K06062  PCAF, KAT2, GCN5; histone acetyltransferase [EC:2.3.1.48]
       K08874  TRRAP; transformation/transcription domain-associated protein
       K11313  SUPT3H, SPT3; transcription initiation protein SPT3
       K11359  SPT7; transcriptional activator SPT7
       K11360  SPT8; transcriptional activator SPT8
       K11361  SPT20, ADA5; transcription factor SPT20
       K11362  HFI1, ADA1; transcriptional coactivator HFI1/ADA1
       K11314  TADA2A, ADA2; transcriptional adapter 2-alpha
       K15127  TADA2B; transcriptional adapter 2-beta
       K11315  TADA3, ADA3, NGG1; transcriptional adapter 3
       K11317  TADA1, STAF42; transcriptional adapter 1
       K11363  SGF11; SAGA-associated factor 11
       K11364  SGF29; SAGA-associated factor 29
       K11365  SGF73; SAGA-associated factor 73
       K11316  SUPT7L; STAGA complex 65 subunit gamma
       K11318  ATXN7, SCA7; ataxin-7
       K11367  CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
       K11368  ENY2, DC6, SUS1; enhancer of yellow 2 transcription factor
       K11366  USP22_27_51, UBP8; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
       K12830  SF3B3, SAP130, RSE1; splicing factor 3B subunit 3
       K11647  SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
       K11648  SMARCB1, SNF5, INI1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
       K11649  SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
       K11650  SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
       K11651  SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
       K05692  ACTB_G1; actin beta/gamma 1
       K11340  ACTL6A, INO80K; actin-like protein 6A
       K11652  ACTL6B; actin-like protein 6B
       K11653  ARID1; AT-rich interactive domain-containing protein 1
       K11765  ARID2; AT-rich interactive domain-containing protein 2
       K11757  PBRM1, PB1; protein polybromo-1
       K11771  SWI1, ADR6; SWI/SNF chromatin-remodeling complex subunit SWI1
       K11786  STH1_SNF2; ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
       K11772  SWI3; SWI/SNF complex subunit SWI3
       K11773  SNF6; SWI/SNF complex component SNF6
       K11774  SNF11; SWI/SNF complex component SNF11
       K11775  SNF12, SWP73; SWI/SNF complex component SWP73
       K11776  SWP82; SWI/SNF complex component SWP82
       K11767  ARP7, SWP61; actin-related protein 7
       K11768  ARP9, SWP59; actin-related protein 9
       K11756  RSC1_2; chromatin structure-remodeling complex subunit RSC1/2
       K11758  RSC3_30; chromatin structure-remodeling complex subunit RSC3/30
       K11759  RSC4; chromatin structure-remodeling complex subunit RSC4
       K11760  RSC6; chromatin structure-remodeling complex subunit RSC6
       K11761  NPL6, RSC7; chromatin structure-remodeling complex protein RSC7
       K11762  RSC8, SWH3, SSR2; chromatin structure-remodeling complex subunit RSC8
       K11763  RSC9; chromatin structure-remodeling complex subunit RSC9
       K11764  LDB7, RSC14; chromatin structure-remodeling complex protein RSC14
       K11766  RSC58; chromatin structure-remodeling complex subunit RSC58
       K11769  HTL1; chromatin structure-remodeling complex protein HTL1
       K11770  SFH1; chromatin structure-remodeling complex subunit SFH1
       K25815  SUB1; activated RNA polymerase II transcriptional coactivator p15
       K25827  CCAR1; cell division cycle and apoptosis regulator protein 1
       K25828  CALCOCO1; calcium-binding and coiled-coil domain-containing protein 1
       K03145  TFIIS; transcription elongation factor S-II
       K15171  SUPT4H1, SPT4; transcription elongation factor SPT4
       K15172  SUPT5H, SPT5; transcription elongation factor SPT5
       K11292  SUPT6H, SPT6; transcription elongation factor SPT6
       K15173  TTF2; transcription termination factor 2 [EC:5.6.2.-]
       K14400  PCF11; pre-mRNA cleavage complex 2 protein Pcf11
       K14401  CPSF1, CFT1; cleavage and polyadenylation specificity factor subunit 1
       K14403  CPSF3, YSH1; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
       K14404  CPSF4, YTH1; cleavage and polyadenylation specificity factor subunit 4
       K06269  PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
       K06100  SYMPK; symplekin
       K15544  SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
       K12619  XRN2, RAT1; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
       K14845  RAI1, DOM3Z; RAT1-interacting protein
       K15559  RTT103; regulator of Ty1 transposition protein 103
       K13219  SFPQ, PSF; splicing factor, proline- and glutamine-rich
       K15560  NRD1; protein NRD1
       K13191  RBM16, SCAF8; RNA-binding protein 16
       K13167  SCAF4, SFRS15; SR-related and CTD-associated factor 4
       K15561  NAB3; nuclear polyadenylated RNA-binding protein 3
       K10706  SETX, ALS4; senataxin [EC:5.6.2.-]
       K09578  PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
       K15174  PAF1; RNA polymerase II-associated factor 1
       K15175  CDC73; parafibromin
       K15176  CTR9; RNA polymerase-associated protein CTR9
       K15177  LEO1; RNA polymerase-associated protein LEO1
       K15178  RTF1; RNA polymerase-associated protein RTF1
       K15179  WHSC2, NELFA; negative elongation factor A
       K15180  COBRA1, NELFB; negative elongation factor B
       K15181  TH1L, NELFD; negative elongation factor C/D
       K15182  RDBP, NELFE; negative elongation factor E
       K15183  ELL; RNA polymerase II elongation factor ELL
       K15184  AFF1; AF4/FMR2 family member 1
       K15185  AFF4; AF4/FMR2 family member 4
       K15186  EAF; ELL-associated factor
       K15187  MLLT1_3, ENL, AF9; YEATS domain-containing protein 1/3
       K15188  CCNT; cyclin T
       K02211  CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
       K26143  ICE1; little elongation complex subunit 1
       K26144  ICE2; little elongation complex subunit 2
       K24388  ZC3H8; zinc finger CCCH domain-containing protein 8
       K11722  BRD4; bromodomain-containing protein 4
       K15562  BUR1, SGV1; serine/threonine-protein kinase BUR1 [EC:2.7.11.22 2.7.11.23]
       K15563  BUR2; protein BUR2
       K00916  CTK1; CTD kinase subunit alpha [EC:2.7.11.22 2.7.11.23]
       K15564  CTK2; CTD kinase subunit beta
       K15565  CTK3; CTD kinase subunit gamma
       K15189  HEXIM1_2; protein HEXIM1/2
       K15190  MEPCE, BCDIN3; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
       K15191  LARP7; La-related protein 7
       K25816  CCAR2, DBC1; cell cycle and apoptosis regulator protein 2
       K13204  ZNF326; zinc finger protein 326
       K03121  TFII-I, GTF2I; transcription initiation factor TFII-I
       K27274  GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1
       K15192  BTAF1, MOT1; TATA-binding protein-associated factor [EC:5.6.2.-]
       K21751  DR1, NC2-beta; down-regulator of transcription 1
       K21752  DRAP1, NC2-alpha; Dr1-associated corepressor
       K15193  SPTY2D1, SPT2; protein SPT2
       K15194  AFF2; AF4/FMR2 family member 2
       K15195  AFF3; AF4/FMR2 family member 3
       K15732  CTDP1, FCP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
       K18998  CPL1_2; RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16]
       K18999  CPL3_4; RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16]
       K15731  CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
       K17498  SPN1, IWS1; transcription factor SPN1
       K17494  CSRNP; cysteine/serine-rich nuclear protein
       K20826  RPAP1; RNA polymerase II-associated protein 1
       K20827  RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16]
       K23002  RPAP3; RNA polymerase II-associated protein 3
       K06666  TUP1; general transcriptional corepressor TUP1
       K06665  SSN6, CYC8; general transcriptional corepressor CYC8
       K12412  MCM1; pheromone receptor transcription factor
       K21388  AHR1; adhesion and hyphal regulator 1
       K23326  CCNK; cyclin K
       K24104  GPN; GPN-loop GTPase
       K26769  TCEAL1; transcription elongation factor A protein-like 1
       K03018  RPC1, POLR3A; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
       K03021  RPC2, POLR3B; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
       K03027  RPAC1, RPC40, POLR1C; DNA-directed RNA polymerases I and III subunit RPAC1
       K03020  RPAC2, RPC19, POLR1D; DNA-directed RNA polymerases I and III subunit RPAC2
       K03023  RPC3, POLR3C; DNA-directed RNA polymerase III subunit RPC3
       K03026  RPC4, POLR3D; DNA-directed RNA polymerase III subunit RPC4
       K14721  RPC5, POLR3E; DNA-directed RNA polymerase III subunit RPC5
       K03025  RPC6, POLR3F; DNA-directed RNA polymerase III subunit RPC6
       K03024  RPC7, POLR3G; DNA-directed RNA polymerase III subunit RPC7
       K03022  RPC8, POLR3H; DNA-directed RNA polymerase III subunit RPC8
       K25304  RPC9, CRCP; DNA-directed RNA polymerase III subunit RPC9
       K03019  RPC11, POLR3K; DNA-directed RNA polymerase III subunit RPC11
       K09191  GTF3A; general transcription factor IIIA
       K15196  BRF1, GTF3B; transcription factor IIIB 90 kDa subunit
       K15197  BRF2; transcription factor IIIB 50 kDa subunit
       K15198  BDP1, TFC5; transcription factor TFIIIB component B''
       K15199  GTF3C1; general transcription factor 3C polypeptide 1
       K15200  GTF3C2; general transcription factor 3C polypeptide 2
       K15201  GTP3C3, TFC4; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
       K11310  GTF3C4, KAT12; general transcription factor 3C polypeptide 4 [EC:2.3.1.48]
       K15202  GTF3C5, TFC1; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
       K15203  GTF3C6; general transcription factor 3C polypeptide 6
       K15204  TFC3; transcription factor C subunit 3
       K15205  TFC6; transcription factor C subunit 6
       K15206  TFC7; transcription factor C subunit 7
       K15207  TFC8; transcription factor C subunit 8
       K15208  SNAPC1; snRNA-activating protein complex subunit 1
       K15209  SNAPC2; snRNA-activating protein complex subunit 2
       K15210  SNAPC3; snRNA-activating protein complex subunit 3
       K09453  SNAPC4; snRNA-activating protein complex subunit 4
       K15211  SNAPC5; snRNA-activating protein complex subunit 5
       K09364  POU2F, OTF; POU domain transcription factor, class 2
       K09367  POU5F; POU domain transcription factor, class 5
       K20828  ZNF143_76, STAF; zinc finger protein 143/76
       K25817  MAF1; repressor of RNA polymerase III transcription MAF1
       K02999  RPA1, POLR1A; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
       K03002  RPA2, POLR1B; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
       K03005  RPA49, POLR1E; DNA-directed RNA polymerase I subunit RPA49
       K03004  RPA43, POLR1F, TWISTNB; DNA-directed RNA polymerase I subunit RPA43
       K25436  POLR1G; DNA-directed RNA polymerase I subunit RPA34
       K03003  RPA34; DNA-directed RNA polymerase I subunit RPA34
       K03000  RPA12, POLR1H, ZNRD1; DNA-directed RNA polymerase I subunit RPA12
       K03001  RPA14; DNA-directed RNA polymerase I subunit RPA14
       K15212  TAF1A, SL1; TATA box-binding protein-associated factor RNA polymerase I subunit A
       K15213  TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B
       K15214  TAF1C; TATA box-binding protein-associated factor RNA polymerase I subunit C
       K15215  TAF1D; TATA box-binding protein-associated factor RNA polymerase I subunit D
       K09273  UBTF; upstream-binding transcription factor
       K15216  RRN3, TIFIA; RNA polymerase I-specific transcription initiation factor RRN3
       K15217  RRN5; RNA polymerase I-specific transcription initiation factor RRN5
       K15218  RRN6; RNA polymerase I-specific transcription initiation factor RRN6
       K15219  RRN7; RNA polymerase I-specific transcription initiation factor RRN7
       K15220  RRN9; RNA polymerase I-specific transcription initiation factor RRN9
       K15221  RRN10; RNA polymerase I-specific transcription initiation factor RRN10
       K15222  RRN11; RNA polymerase I-specific transcription initiation factor RRN11
       K15223  UAF30, SPP27; upstream activation factor subunit UAF30
       K11654  SMARCA5, SNF2H, ISWI; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
       K15224  BAZ2A, TIP5; bromodomain adjacent to zinc finger domain protein 2A
       K15225  TTF1; transcription termination factor 1
       K19387  PTRF; polymerase I and transcript release factor
       K25818  NOLC1; nucleolar and coiled-body phosphoprotein 1
       K03040  rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
       K03043  rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
       K03046  rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
       K13797  rpoBC; DNA-directed RNA polymerase subunit beta-beta' [EC:2.7.7.6]
       K03048  rpoE; DNA-directed RNA polymerase subunit delta
       K03060  rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
       K03086  rpoD; RNA polymerase primary sigma factor
       K03087  rpoS; RNA polymerase nonessential primary-like sigma factor
       K03088  rpoE; RNA polymerase sigma-70 factor, ECF subfamily
       K23514  fecI, prhI; RNA polymerase sigma-19 factor, ECF subfamily
       K24073  cnrH; RNA polymerase sigma factor CnrH
       K03089  rpoH; RNA polymerase sigma-32 factor
       K03090  sigB; RNA polymerase sigma-B factor
       K03091  sigE_F_G; RNA polymerase sigma-E/F/G factor
       K27000  sigH; RNA polymerase sigma-H factor
       K03093  sigI; RNA polymerase sigma-I factor
       K26992  sigO; RNA polymerase sigma-O factor
       K03092  rpoN; RNA polymerase sigma-54 factor
       K02405  fliA, whiG; RNA polymerase sigma factor FliA
       K24072  xpf; positive control factor
       K03580  hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
       K02600  nusA; transcription termination/antitermination protein NusA
       K03625  nusB; transcription antitermination protein NusB
       K02601  nusG; transcription termination/antitermination protein NusG
       K03599  sspA, mglA; stringent starvation protein A
       K03600  sspB; stringent starvation protein B
       K17752  rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
       K17762  rsbS; rsbT antagonist protein RsbS
       K17763  rsbR; rsbT co-antagonist protein RsbR
       K07315  rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
       K19707  rsbQ; sigma-B regulation protein RsbQ
       K05518  rsbX; phosphoserine phosphatase RsbX [EC:3.1.3.3]
       K04749  rsbV; anti-sigma B factor antagonist
       K04757  rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
       K03597  rseA; sigma-E factor negative regulatory protein RseA
       K03598  rseB; sigma-E factor negative regulatory protein RseB
       K03803  rseC; sigma-E factor negative regulatory protein RseC
       K06204  dksA; RNA polymerase-binding transcription factor
       K03624  greA; transcription elongation factor GreA
       K04760  greB; transcription elongation factor GreB
       K03628  rho; transcription termination factor Rho
       K19000  rof; Rho-binding antiterminator
       K03041  rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
       K03042  rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
       K03044  rpoB1; DNA-directed RNA polymerase subunit B' [EC:2.7.7.6]
       K03045  rpoB2; DNA-directed RNA polymerase subunit B" [EC:2.7.7.6]
       K13798  rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
       K03047  rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
       K03049  rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
       K03051  rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
       K03052  rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6]
       K03053  rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
       K03054  rpoI; DNA-directed RNA polymerase subunit I [EC:2.7.7.6]
       K03055  rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
       K03056  rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
       K03058  rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
       K03059  rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
       K00960  rpo13; DNA-directed RNA polymerase subunit 13 [EC:2.7.7.6]
       K03057  tfs; transcription factor S
     03019 Messenger RNA biogenesis [BR:ko03019]
     03041 Spliceosome [BR:ko03041]
     03011 Ribosome [BR:ko03011]
     03009 Ribosome biogenesis [BR:ko03009]
     03016 Transfer RNA biogenesis [BR:ko03016]
     03012 Translation factors [BR:ko03012]
     03110 Chaperones and folding catalysts [BR:ko03110]
     04131 Membrane trafficking [BR:ko04131]
     04121 Ubiquitin system [BR:ko04121]
     03051 Proteasome [BR:ko03051]
     03032 DNA replication proteins [BR:ko03032]
     03036 Chromosome and associated proteins [BR:ko03036]
     03400 DNA repair and recombination proteins [BR:ko03400]
       K00567  ogt, MGMT; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
       K10859  ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
       K10860  ALKBH3, DEPC1; mRNA N1-methyladenine demethylase [EC:1.14.11.54]
       K18663  ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
       K01669  phr, PHR1; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
       K03648  UNG, UDG; uracil-DNA glycosylase [EC:3.2.2.27]
       K10861  UDG2, CCNO; uracil-DNA glycosylase 2 [EC:3.2.2.-]
       K20813  TDG; thymine-DNA glycosylase [EC:3.2.2.29]
       K03652  MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
       K10800  SMUG1; single-strand selective monofunctional uracil DNA glycosylase [EC:3.2.2.-]
       K03575  mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
       K10801  MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
       K03660  OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
       K10567  NEIL1; endonuclease VIII-like 1 [EC:3.2.2.- 4.2.99.18]
       K10568  NEIL2; endonuclease VIII-like 2 [EC:3.2.2.- 4.2.99.18]
       K10569  NEIL3; endonuclease VIII-like 3 [EC:3.2.2.- 4.2.99.18]
       K10773  NTHL1, nth; endonuclease III [EC:3.2.2.- 4.2.99.18]
       K10771  APEX1; AP endonuclease 1 [EC:3.1.11.2]
       K10772  APEX2; AP endonuclease 2 [EC:3.1.11.2]
       K02327  POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
       K02328  POLD2; DNA polymerase delta subunit 2
       K03504  POLD3; DNA polymerase delta subunit 3
       K03505  POLD4; DNA polymerase delta subunit 4
       K02324  POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
       K02325  POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
       K02326  POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
       K03506  POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
       K04802  PCNA; proliferating cell nuclear antigen
       K04799  FEN1, RAD2; flap endonuclease-1 [EC:3.1.-.-]
       K10747  LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
       K02330  POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
       K10803  XRCC1; DNA-repair protein XRCC1
       K10776  LIG3; DNA ligase 3 [EC:6.5.1.1]
       K10862  TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
       K10863  APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
       K13295  APLF; aprataxin and PNK-like factor [EC:3.1.-.-]
       K08073  PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
       K08075  E3.1.3.32; polynucleotide 3'-phosphatase [EC:3.1.3.32]
       K10802  HMGB1; high mobility group protein B1
       K03512  POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
       K24070  PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
       K10798  PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
       K10838  XPC; xeroderma pigmentosum group C-complementing protein
       K10839  RAD23, HR23; UV excision repair protein RAD23
       K10840  CETN2; centrin-2
       K03868  RBX1, ROC1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
       K10609  CUL4; cullin 4
       K10610  DDB1; DNA damage-binding protein 1
       K10140  DDB2; DNA damage-binding protein 2
       K15082  RAD7; DNA repair protein RAD7
       K15083  RAD16; DNA repair protein RAD16
       K03006  RPB1, POLR2A; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
       K03010  RPB2, POLR2B; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
       K03011  RPB3, POLR2C; DNA-directed RNA polymerase II subunit RPB3
       K03012  RPB4, POLR2D; DNA-directed RNA polymerase II subunit RPB4
       K03013  RPABC1, RPB5, POLR2E; DNA-directed RNA polymerases I, II, and III subunit RPABC1
       K03014  RPABC2, RPB6, POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2
       K03015  RPB7, POLR2G; DNA-directed RNA polymerase II subunit RPB7
       K03016  RPABC3, RPB8, POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3
       K03017  RPB9, POLR2I; DNA-directed RNA polymerase II subunit RPB9
       K03007  RPABC5, RPB10, POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5
       K03008  RPB11, POLR2J; DNA-directed RNA polymerase II subunit RPB11
       K03009  RPABC4, RPB12, POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4
       K10570  ERCC8, CKN1, CSA; DNA excision repair protein ERCC-8
       K10841  ERCC6, CSB, RAD26; DNA excision repair protein ERCC-6
       K23720  UVSSA; UV-stimulated scaffold protein A
       K25829  ELOF1, ELF1; transcription elongation factor 1
       K10843  ERCC3, XPB; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
       K10844  ERCC2, XPD; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
       K03141  TFIIH1, GTF2H1, TFB1; transcription initiation factor TFIIH subunit 1
       K03142  TFIIH2, GTF2H2, SSL1; transcription initiation factor TFIIH subunit 2
       K03143  TFIIH3, GTF2H3, TFB4; transcription initiation factor TFIIH subunit 3
       K03144  TFIIH4, GTF2H4, TFB2; transcription initiation factor TFIIH subunit 4
       K10845  TTDA, GTF2H5, TFB5; TFIIH basal transcription factor complex TTD-A subunit
       K02202  CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
       K06634  CCNH; cyclin H
       K10842  MNAT1; CDK-activating kinase assembly factor MAT1
       K07466  RFA1, RPA1, rpa; replication factor A1
       K10739  RFA2, RPA2; replication factor A2
       K10740  RPA3; replication factor A3
       K10741  RPA4; replication factor A4
       K10847  XPA; DNA-repair protein complementing XP-A cells
       K10849  ERCC1; DNA excision repair protein ERCC-1
       K10848  ERCC4, XPF; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
       K10846  ERCC5, XPG, RAD2; DNA excision repair protein ERCC-5
       K15075  MET18, MMS19; DNA repair/transcription protein MET18/MMS19
       K03869  CUL3; cullin 3
       K10612  CUL5; cullin 5
       K03872  ELOC, TCEB1; elongin-C
       K03873  ELOB, TCEB2; elongin-B
       K15076  ELOA, TCEB3; elongin-A
       K15077  ELA1; elongin-A
       K26545  UBAP2; ubiquitin-associated protein 2
       K08735  MSH2; DNA mismatch repair protein MSH2
       K08736  MSH3; DNA mismatch repair protein MSH3
       K08737  MSH6; DNA mismatch repair protein MSH6
       K10864  PMS1; DNA mismatch repair protein PMS1
       K08734  MLH1; DNA mismatch repair protein MLH1
       K10858  PMS2; DNA mismatch repair protein PMS2
       K08739  MLH3; DNA mismatch repair protein MLH3
       K10754  RFC1; replication factor C subunit 1
       K10755  RFC2_4; replication factor C subunit 2/4
       K10756  RFC3_5; replication factor C subunit 3/5
       K10746  EXO1; exonuclease 1 [EC:3.1.-.-]
       K24755  WDR76, CMR1; WD repeat-containing protein 76
       K10865  MRE11; double-strand break repair protein MRE11
       K10866  RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
       K10867  NBN, NBS1; nibrin
       K10868  XRS2; DNA repair protein XRS2
       K10605  BRCA1; breast cancer type 1 susceptibility protein [EC:2.3.2.27]
       K10683  BARD1; BRCA1-associated RING domain protein 1
       K20774  FAM175A, ABRA1; BRCA1-A complex subunit Abraxas
       K20775  UIMC1, RAP80; BRCA1-A complex subunit RAP80
       K20776  BABAM, NBA1, MERIT40; BRISC and BRCA1-A complex member 1
       K12173  BRE, BRCC45; BRCA1-A complex subunit BRE
       K11864  BRCC3, BRCC36; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
       K15362  BRIP1, BACH1, FANCJ; fanconi anemia group J protein [EC:5.6.2.3]
       K10728  TOPBP1; topoisomerase (DNA) II binding protein 1
       K20773  RBBP8, CTIP; DNA endonuclease RBBP8 [EC:3.1.-.-]
       K08775  BRCA2, FANCD1; breast cancer 2 susceptibility protein
       K10897  PALB2, FANCN; partner and localizer of BRCA2
       K04482  RAD51; DNA repair protein RAD51
       K10869  RAD51L1, RAD51B; RAD51-like protein 1
       K10870  RAD51L2, RAD51C; RAD51-like protein 2
       K10871  RAD51L3, RAD51D; RAD51-like protein 3
       K10879  XRCC2; DNA-repair protein XRCC2
       K10880  XRCC3; DNA-repair protein XRCC3
       K10957  RAD55; DNA repair protein RAD55
       K10958  RAD57; DNA repair protein RAD57
       K10873  RAD52; DNA repair and recombination protein RAD52
       K10874  RDM1, RAD52B; RAD52 motif-containing protein 1
       K26556  RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
       K26558  RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
       K10959  RAD59; DNA repair protein RAD59
       K10875  RAD54L, RAD54; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
       K10876  RAD54L2; RAD54-like protein 2 [EC:5.6.2.-]
       K10877  RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
       K10899  RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
       K10900  WRN, RECQL2; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
       K10901  BLM, RECQL3, SGS1; bloom syndrome protein [EC:5.6.2.4]
       K10730  RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
       K10902  RECQL5; ATP-dependent DNA helicase Q5 [EC:5.6.2.4]
       K03165  TOP3; DNA topoisomerase III [EC:5.6.2.1]
       K10990  RMI1, BRAP75; RecQ-mediated genome instability protein 1
       K15364  NCE4, RMI1; RecQ-mediated genome instability protein 1
       K15365  RMI2; RecQ-mediated genome instability protein 2
       K15423  PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
       K15424  PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1
       K15425  PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
       K17491  SMEK, PPP4R3; protein phosphatase 4 regulatory subunit 3
       K15426  PPP4R4; serine/threonine-protein phosphatase 4 regulatory subunit 4
       K19022  AP5B1; AP-5 complex subunit beta-1
       K19023  AP5M1, MUDENG; AP-5 complex subunit mu-1
       K19024  AP5S1; AP-5 complex subunit sigma-1
       K19025  AP5Z1, SPG48; AP-5 complex subunit zeta-1
       K22803  SMC5; structural maintenance of chromosomes protein 5
       K22804  SMC6; structural maintenance of chromosomes protein 6
       K22805  FAM84A, NSE1; protein FAM84A
       K22817  NSMCE1, NSE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
       K22756  NSMCE2, NSE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
       K22823  NSMCE3, NSE3; non-structural maintenance of chromosomes element 3
       K22825  NSMCE4, NSE4; non-structural maintenance of chromosomes element 4
       K22826  EID3, NSMCE4B; EP300-interacting inhibitor of differentiation 3
       K26126  SLF1; SMC5-SMC6 complex localization factor protein 1
       K26127  SLF2; SMC5-SMC6 complex localization factor protein 2
       K10882  EME1, MMS4; crossover junction endonuclease EME1 [EC:3.1.22.-]
       K10883  EME2; crossover junction endonuclease EME2
       K20777  EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
       K08991  MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
       K10881  SHFM1, DSS1, RPN15; 26 proteasome complex subunit DSS1
       K10991  SWI5, SAE3; DNA repair protein Swi5/Sae3
       K10992  SFR1; Swi5-dependent recombination DNA repair protein 1
       K15078  SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
       K10484  BTBD12, SLX4; structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
       K15079  SLX4; structure-specific endonuclease subunit SLX4
       K15338  GEN1, YEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
       K19026  SPG11; spatacsin
       K19027  ZFYVE26; zinc finger FYVE domain-containing protein 26
       K20778  RAD51AP1; RAD51-associated protein 1
       K11339  MORF4L1, MRG15, EAF3; mortality factor 4-like protein 1
       K22544  SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
       K22766  FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
       K22806  SPIDR; DNA repair-scaffolding protein
       K22810  FAM84B; protein FAM84B
       K23112  BRAT1; BRCA1-associated ATM activator 1
       K23456  CFAP410, C21ORF2; cilla- and flagella-associated protein
       K25065  HDGFL2; hepatoma-derived growth factor-related protein 2
       K25770  ZSWIM7, SWS1; zinc finger SWIM domain-containing protein 7
       K25771  SWSAP1; ATPase SWSAP1
       K25790  EMSY; BRCA2-interacting transcriptional repressor EMSY
       K25791  HSF2BP; heat shock factor 2-binding protein
       K26125  MMS22L; protein MMS22-like
       K09257  NFKBIL2; NF-kappa-B inhibitor-like protein 2
       K27262  BOD1L1; biorientation of chromosomes in cell division protein 1-like 1
       K27412  PARPBP; PCNA-interacting partner
       K22807  WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
       K22685  WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
       K26559  WHY1; single-stranded DNA-binding protein WHY1
       K26561  WHY2; single-stranded DNA-binding protein WHY2
       K26560  WHY3; single-stranded DNA-binding protein WHY3
       K14635  MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
       K15080  SAW1; single-strand annealing weakened protein 1
       K26124  RTT101, CUL8; cullin 8
       K26122  MMS22; E3 ubiquitin-protein ligase substrate receptor MMS22
       K26123  MMS1; E3 ubiquitin-protein ligase linker protein MMS1
       K10884  XRCC6, KU70, G22P1; ATP-dependent DNA helicase 2 subunit 1
       K10885  XRCC5, KU80, G22P2; ATP-dependent DNA helicase 2 subunit 2
       K06642  PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1]
       K10777  LIG4, DNL4; DNA ligase 4 [EC:6.5.1.1]
       K10886  XRCC4; DNA-repair protein XRCC4
       K10980  NHEJ1, XLF; non-homologous end-joining factor 1
       K10982  LIF1; ligase-interacting factor 1
       K10983  NEJ1, LIF2; non-homologous end-joining protein 1
       K03513  POLM; DNA polymerase mu [EC:2.7.7.7]
       K00977  DNTT; DNA nucleotidylexotransferase [EC:2.7.7.31]
       K10981  POL4; DNA polymerase IV [EC:2.7.7.7]
       K10887  DCLRE1C, ARTEMIS, SCIDA; DNA cross-link repair 1C protein [EC:3.1.-.-]
       K19619  TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
       K23113  SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
       K23386  PWWP3, MUM1; PWWP domain-containing DNA repair factor 3
       K25772  PAXX; protein PAXX
       K26155  CYREN, MRI; cell cycle regulator of non-homologous end joining
       K25792  JMJD8; jumonji domain-containing protein 8
       K26128  SHLD1; shieldin complex subunit 1
       K26129  SHLD2; shieldin complex subunit 2
       K26130  SHLD3; shieldin complex subunit 3
       K10888  FANCA; fanconi anemia group A protein
       K10889  FANCB; fanconi anemia group B protein
       K10890  FANCC; fanconi anemia group C protein
       K10892  FANCE; fanconi anemia group E protein
       K10893  FANCF; fanconi anemia group F protein
       K10894  FANCG; fanconi anemia group G protein
       K10606  FANCL, PHF9; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
       K10896  FANCM; fanconi anemia group M protein
       K10898  FAAP24; fanconi anemia-associated protein
       K10993  FAAP100; fanconi anemia core complex 100 kDa subunit
       K06054  HES1; hairy and enhancer of split 1
       K11511  APITD1, CENPS, MHF1; centromere protein S
       K15360  STRA13, CENPX, MHF2; centromere protein X
       K13960  UBE2T, HSPC150; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
       K10891  FANCD2; fanconi anemia group D2 protein
       K10895  FANCI; fanconi anemia group I protein
       K15363  FAN1, MTMR15; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
       K11137  TELO2, TEL2; telomere length regulation protein
       K11832  USP1; ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]
       K15361  WDR48, UAF1; WD repeat-containing protein 48
       K15498  PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
       K15499  PPP6R1, SAPS1; serine/threonine-protein phosphatase 6 regulatory subunit 1
       K15500  PPP6R2, SAPS2; serine/threonine-protein phosphatase 6 regulatory subunit 2
       K15501  PPP6R3, SAPS3; serine/threonine-protein phosphatase 6 regulatory subunit 3
       K15502  ANKRD28; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A
       K15503  ANKRD44; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B
       K15504  ANKRD52; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C
       K10667  RNF8; E3 ubiquitin-protein ligase RNF8 [EC:2.3.2.27]
       K20779  RNF168; E3 ubiquitin-protein ligase RNF168 [EC:2.3.2.31]
       K20805  RNF169; E3 ubiquitin-protein ligase RNF169 [EC:2.3.2.31]
       K10595  HERC2; E3 ubiquitin-protein ligase HERC2 [EC:2.3.2.26]
       K23314  WRAP53, TCAB1; telomerase Cajal body protein 1
       K24164  TPRN; taperin
       K24688  ZCWPW1; zinc finger CW-type PWWP domain protein 1
       K24752  WDR70; WD repeat-containing protein 70
       K03509  POLH; DNA polymerase eta [EC:2.7.7.7]
       K03510  POLI; DNA polymerase iota [EC:2.7.7.7]
       K03511  POLK; DNA polymerase kappa [EC:2.7.7.7]
       K03515  REV1; DNA repair protein REV1 [EC:2.7.7.-]
       K02350  REV3L, POLZ; DNA polymerase zeta [EC:2.7.7.7]
       K03508  POLZ2, rev7; DNA polymerase zeta [EC:2.7.7.7]
       K16618  POLN; DNA polymerase nu [EC:2.7.7.7]
       K10573  UBE2A, UBC2, RAD6A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
       K10574  UBE2B, RAD6B; ubiquitin-conjugating enzyme E2 B [EC:2.3.2.23]
       K10627  RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
       K15505  RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
       K15711  SMARCA3, HLTF; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
       K10704  UBE2V; ubiquitin-conjugating enzyme E2 variant
       K10580  UBE2N, BLU, UBC13; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
       K24051  SPRTN; SprT-like domain-contaning protein Spartan
       K26957  GCNA, ACRC; germ cell nuclear acidic protein
       K10994  RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
       K10995  RAD9B; cell cycle checkpoint control protein RAD9B
       K10903  HUS1; HUS1 checkpoint protein
       K10996  HUS1B; checkpoint protein HUS1B
       K02830  HRAD1, RAD17; cell cycle checkpoint protein [EC:3.1.11.2]
       K06662  HRAD17, RAD24; cell cycle checkpoint protein
       K02544  MEC3; G2-specific checkpoint protein
       K06663  DDC1; DNA damage checkpoint protein
       K10997  TIMELESS, TOF1, SWI1; replication fork protection complex subunit TIMELESS/Tof1/Swi1
       K10998  TIPIN, CSM3, SWI3; replication fork protection complex subunit TIPIN/Csm3/Swi3
       K25773  CLSPN; claspin
       K11272  MRC1; mediator of replication checkpoint protein 1
       K20403  TTI1; TELO2-interacting protein 1
       K23115  TTI2; TELO2-interacting protein 2
       K23390  BAG6; large proline-rich protein BAG6
       K23388  UBL4; ubiquitin-like protein 4
       K23387  GET4; golgi to ER traffic protein 4
       K06640  ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
       K10905  ATRIP; ATR interacting protein
       K04728  ATM, TEL1; serine-protein kinase ATM [EC:2.7.11.1]
       K04451  TP53, P53; tumor protein p53
       K02216  CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
       K06641  CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
       K06645  CDC25A; M-phase inducer phosphatase 1 [EC:3.1.3.48]
       K05866  CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
       K05867  CDC25C; M-phase inducer phosphatase 3 [EC:3.1.3.48]
       K02555  MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
       K16197  YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
       K16198  YWHAG_H; 14-3-3 protein gamma/eta
       K06630  YWHAE; 14-3-3 protein epsilon
       K19483  NAV2; neuron navigator 2 [EC:5.6.2.4]
       K06632  WEE1; wee1-like protein kinase [EC:2.7.11.1]
       K02831  RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-]
       K21944  PER1; period circadian protein 1
       K02633  PER2; period circadian protein 2
       K21945  PER3; period circadian protein 3
       K06661  RAD9; DNA repair protein RAD9
       K20780  MDC1; mediator of DNA damage checkpoint protein 1
       K02543  MEC1; cell cycle checkpoint protein MEC1
       K15081  AMN1; antagonist of mitotic exit network protein 1
       K17336  PLS3; plastin-3
       K18340  AEN, ISG20L1; apoptosis-enhancing nuclease [EC:3.1.-.-]
       K08862  PLK3, CNK; polo-like kinase 3 [EC:2.7.11.21]
       K19596  PLK5; inactive serine/threonine-protein kinase PLK5
       K08857  NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
       K20879  NEK10; serine/threonine-protein kinase Nek10 [EC:2.7.11.1]
       K20880  NEK11; serine/threonine-protein kinase Nek11 [EC:2.7.11.1]
       K03114  SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
       K24663  NDD1; nuclear division defective protein 1
       K24664  FKH; forkhead protein FKH
       K22422  DONSON; protein downstream neighbor of Son
       K22808  KANK; KN motif and ankyrin repeat domain-containing protein
       K23389  KLLN; killin
       K24458  SLFN11; schlafen family member 11 [EC:3.6.-.-]
       K24782  CHMP4C, SNF7, VPS32C; charged multivesicular body protein 4C
       K12196  VPS4; vacuolar protein-sorting-associated protein 4
       K24778  ZFYVE19, ANCHR; abscission/NoCut checkpoint regulator
       K25059  SDE2; replication stress response regulator SDE2
       K24770  DSE1, ALT2, EMB2757; protein decreased size exclusion limit 1
       K02349  POLQ; DNA polymerase theta [EC:2.7.7.7]
       K02331  POL5, MYBBP1A; DNA polymerase phi [EC:2.7.7.7]
       K22761  PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
       K10790  TREX1; three prime repair exonuclease 1 [EC:3.1.11.2]
       K10791  TREX2; three prime repair exonuclease 2 [EC:3.1.11.2]
       K15340  DCLRE1A, SNM1A, PSO2; DNA cross-link repair 1A protein
       K15341  DCLRE1B, SNM1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
       K17815  EXO5; exonuclease V [EC:3.1.-.-]
       K21813  ENDOV; endonuclease V [EC:3.1.26.-]
       K25861  ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
       K21411  ANKLE1, LEM3; ankyrin repeat and LEM domain-containing protein 1
       K05986  NUCS; nuclease S1 [EC:3.1.30.1]
       K19178  HELQ; POLQ-like helicase [EC:5.6.2.4]
       K20098  ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
       K10599  PRPF19, PRP19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
       K12860  CDC5L, CDC5, CEF1; pre-mRNA-splicing factor CDC5/CEF1
       K12861  BCAS2; pre-mRNA-splicing factor SPF27
       K12862  PLRG1, PRL1, PRP46; pleiotropic regulator 1
       K03574  mutT, NUDT15, MTH2; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
       K17816  NUDT1, MTH1; 8-oxo-dGTP diphosphatase / 2-hydroxy-dATP diphosphatase [EC:3.6.1.55 3.6.1.56]
       K17817  NUDT18, MTH3; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
       K01520  dut, DUT; dUTP diphosphatase [EC:3.6.1.23]
       K10807  RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
       K10808  RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
       K10778  ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
       K13530  adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
       K13531  adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
       K06876  phrB; (6-4)DNA photolyase [EC:4.1.99.13]
       K03919  alkB; DNA oxidative demethylase [EC:1.14.11.33]
       K03649  mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
       K21929  udg; uracil-DNA glycosylase [EC:3.2.2.27]
       K01247  alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
       K13529  ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
       K01246  tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
       K10563  mutM, fpg; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
       K05522  nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
       K01142  E3.1.11.2, xthA; exodeoxyribonuclease III [EC:3.1.11.2]
       K01151  nfo; deoxyribonuclease IV [EC:3.1.21.2]
       K05982  E3.1.21.7, nfi; deoxyribonuclease V [EC:3.1.21.7]
       K07462  recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
       K01972  E6.5.1.2, ligA, ligB; DNA ligase (NAD+) [EC:6.5.1.2]
       K02335  polA; DNA polymerase I [EC:2.7.7.7]
       K03701  uvrA; excinuclease ABC subunit A
       K03702  uvrB; excinuclease ABC subunit B
       K03703  uvrC; excinuclease ABC subunit C
       K05984  cho; excinuclease Cho [EC:3.1.25.-]
       K03657  uvrD, pcrA; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
       K03043  rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
       K03046  rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
       K13797  rpoBC; DNA-directed RNA polymerase subunit beta-beta' [EC:2.7.7.6]
       K03040  rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
       K03048  rpoE; DNA-directed RNA polymerase subunit delta
       K03060  rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
       K03723  mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
       K03555  mutS; DNA mismatch repair protein MutS
       K07456  mutS2; DNA mismatch repair protein MutS2
       K03572  mutL; DNA mismatch repair protein MutL
       K03573  mutH; DNA mismatch repair protein MutH
       K01141  sbcB, exoI; exodeoxyribonuclease I [EC:3.1.11.1]
       K03601  xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
       K03602  xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
       K10857  exoX; exodeoxyribonuclease X [EC:3.1.11.-]
       K02337  dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
       K03763  polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
       K02338  dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
       K02339  holC; DNA polymerase III subunit chi [EC:2.7.7.7]
       K02340  holA; DNA polymerase III subunit delta [EC:2.7.7.7]
       K02341  holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
       K02342  dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
       K14159  rnhA-dnaQ; ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7]
       K02343  dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
       K02344  holD; DNA polymerase III subunit psi [EC:2.7.7.7]
       K02345  holE; DNA polymerase III subunit theta [EC:2.7.7.7]
       K03111  ssb; single-strand DNA-binding protein
       K06223  dam; DNA adenine methylase [EC:2.1.1.72]
       K07458  vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
       K03582  recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
       K03583  recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
       K03581  recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
       K03553  recA; recombination protein RecA
       K03550  ruvA; holliday junction DNA helicase RuvA
       K03551  ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
       K01159  ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
       K01160  rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
       K04066  priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
       K02686  priB; primosomal replication protein N
       K04067  priC; primosomal replication protein N''
       K02317  dnaT; DNA replication protein DnaT
       K03546  sbcC, rad50; DNA repair protein SbcC/Rad50
       K03547  sbcD, mre11; DNA repair protein SbcD/Mre11
       K04485  radA, sms; DNA repair protein RadA/Sms
       K03629  recF; DNA replication and repair protein RecF
       K03655  recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
       K03584  recO; DNA repair protein RecO (recombination protein O)
       K06187  recR; recombination protein RecR
       K03631  recN; DNA repair protein RecN (Recombination protein N)
       K03700  recU; recombination protein U
       K03554  rdgC; recombination associated protein RdgC
       K16898  addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
       K16899  addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
       K15342  cas1; CRISP-associated protein Cas1
       K19789  radD; DNA repair protein RadD
       K04483  radA; DNA repair protein RadA
       K04484  radB; DNA repair protein RadB
       K03552  hjr, hjc, hje; holliday junction resolvase [EC:3.1.21.10]
       K06915  herA; DNA double-strand break repair helicase HerA and related ATPase
       K25510  nurA; DNA double-strand break repair nuclease NurA [EC:3.1.-.-]
       K03726  helS; ATP-dependent DNA helicase [EC:5.6.2.4]
       K10979  ku; DNA end-binding protein Ku
       K01971  ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
       K02469  gyrA; DNA gyrase subunit A [EC:5.6.2.2]
       K02470  gyrB; DNA gyrase subunit B [EC:5.6.2.2]
       K03168  topA; DNA topoisomerase I [EC:5.6.2.1]
       K05787  hupA; DNA-binding protein HU-alpha
       K03530  hupB; DNA-binding protein HU-beta
       K10906  recE; exodeoxyribonuclease VIII [EC:3.1.11.-]
       K07455  recT; recombination protein RecT
       K03557  fis; Fis family transcriptional regulator, factor for inversion stimulation protein
       K04764  ihfA, himA; integration host factor subunit alpha
       K05788  ihfB, himD; integration host factor subunit beta
       K03654  recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
       K03746  hns; DNA-binding protein H-NS
       K02346  dinB; DNA polymerase IV [EC:2.7.7.7]
       K03502  umuC; DNA polymerase V
       K03503  umuD; DNA polymerase V [EC:3.4.21.-]
       K04479  dbh; DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7]
       K01356  lexA; repressor LexA [EC:3.4.21.88]
       K02336  polB; DNA polymerase II [EC:2.7.7.7]
       K14160  imuA; protein ImuA
       K14161  imuB; protein ImuB
       K14162  dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
       K14623  dinD; DNA-damage-inducible protein D
       K12149  dinI; DNA-damage-inducible protein I
       K03565  recX; regulatory protein
       K01157  rpnA; recombination-promoting nuclease RpnA [EC:3.1.21.-]
       K24087  rpnB; recombination-promoting nuclease RpnB [EC:3.1.21.-]
       K24088  rpnC; recombination-promoting nuclease RpnC [EC:3.1.21.-]
       K24089  rpnD; recombination-promoting nuclease RpnD [EC:3.1.21.-]
       K24090  rpnE; recombination-promoting nuclease RpnE
       K02347  polX, dpx; DNA polymerase (family X)
       K03656  rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
       K03658  helD; DNA helicase IV [EC:5.6.2.4]
       K03722  dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
       K03724  lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
       K23258  mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
       K01554  K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
       K00525  E1.17.4.1A, nrdA, nrdE; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
       K00526  E1.17.4.1B, nrdB, nrdF; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
       K06881  nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
       K22585  nreA; DNA repair protein NreA
     03029 Mitochondrial biogenesis [BR:ko03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

[ KO | BRITE | KEGG2 | KEGG ]
Last updated: April 25, 2024