KEGG Software
Web Servers
The following web tools are developed and maintained by Kanehisa Laboratories.| BlastKOALA GhostKOALA | KOALA family tools for automatic annotation of genome and metagenome sequences with subsequent KEGG Mapper analysis. [reference] |
| KEGG Mapper | KEGG mapping against PATHWAY/BRITE/MODULE databases for biological interpretation of genomic, transcriptomic, metabolomic, and other large-scale data sets. [reference] |
The following web servers are developed and maintained by Kyoto University Bioinformatics Center as part of its GenomeNet service.
| KofamKOALA | Another KOALA family tool for automatic KO assignment and KEGG mapping. |
| KAAS | The original KEGG automatic annotation server. [reference] |
| KEGG OC | KEGG OC viewer for browsing and analyzing ortholog clusters (OCs) computationally generated from the KEGG SSDB database. [reference] |
| SIMCOMP SUBCOMP | Chemical structure similarity search against KEGG COMPOUND, KEGG DRUG, and other databases. SIMCOMP is based on 2D graph representation, while SUBCOMP is based on bit-string representation of chemical structures. [references] |
| KCaM | Glycan structure similarity search against KEGG GLYCAN using tree structure comparison methods. [reference] |
| E-zyme | Computational assignment of EC number sub-subclasses from chemical structure transformation patterns of substrates and products. [references] |
| PathPred | Prediction of microbial biodegradation pathways and plant second metabolite biosynthesis pathways using reaction patterns in KEGG RCLASS. [references] |
| GENIES | Gene network prediction from heterogeneous data sets using kernel methods and partially known network information. [references] |
| DINIES | Drug-target interaction network prediction from various types of biological data including chemical structures, drug side effects, amino acid sequences and protein domains. [references] |
The following service is also available at GenomeNet.
Last updated: November 7, 2019