PCIDB

KNApSAcK Metabolite C00003088

Metabolite

KNApSAcK Entry

id C00003088
Name Loganin
CAS RN 18524-94-2
Standard InChI InChI=1S/C17H26O10/c1-6-9(19)3-7-8(15(23)24-2)5-25-16(11(6)7)27-17-14(22)13(21)12(20)10(4-18)26-17/h5-7,9-14,16-22H,3-4H2,1-2H3/t6-,7+,9-,10?,11+,12+,13-,14?,16-,17-/m0/s1
Standard InChI (Main Layer) InChI=1S/C17H26O10/c1-6-9(19)3-7-8(15(23)24-2)5-25-16(11(6)7)27-17-14(22)13(21)12(20)10(4-18)26-17/h5-7,9-14,16-22H,3-4H2,1-2H3

Cluster

Phytochemical cluster No. 36
KCF-S cluster No. 56

Link

ChEMBL

By standard InChI
By standard InChI Main Layer CHEMBL1081584 CHEMBL1081586 CHEMBL1589904 CHEMBL2135791

KEGG

By LinkDB C01433

CTD

By CAS RN C059516

Species

Summary

Plant class

class name count
asterids 20

Family

family name count
Loganiaceae 4
Rubiaceae 4
Oleaceae 4
Caprifoliaceae 3
Gentianaceae 2
Menyanthaceae 1
Apocynaceae 1
Verbenaceae 1

List (20)

* NCBI
KNApSAcK organism *ID *family *plant class *kingdom
Adina racemosa 170034 Rubiaceae asterids Viridiplantae
Calycophyllum spruceanum 271242 Rubiaceae asterids Viridiplantae
Catharanthus roseus 4058 Apocynaceae asterids Viridiplantae
Dipsacus asper 516548 Caprifoliaceae asterids Viridiplantae
Gentiana loureirii 21496 Gentianaceae asterids Viridiplantae
Gentiana pedicellata 21496 Gentianaceae asterids Viridiplantae
Jasminum hemsleyi Yamamoto 4147 Oleaceae asterids Viridiplantae
Lippia graveolens 320344 Verbenaceae asterids Viridiplantae
Lonicera japonica Thunb. 105884 Caprifoliaceae asterids Viridiplantae
Lonicera quinquelocularis 566153 Caprifoliaceae asterids Viridiplantae
Menyanthes trifoliata 28525 Menyanthaceae asterids Viridiplantae
Neonauclea sessilifolia 165066 Rubiaceae asterids Viridiplantae
Nyctanthes arbor-tristis L. 41398 Oleaceae asterids Viridiplantae
Ophiorrhiza liukiuensis 489897 Rubiaceae asterids Viridiplantae
Osmanthus austrocaledonicus (Vieill.) Knobl. 990351 Oleaceae asterids Viridiplantae
Picconia excelsa (Aiton) DC. 126560 Oleaceae asterids Viridiplantae
Strychnos axillaris 1037789 Loganiaceae asterids Viridiplantae
Strychnos lucida 403120 Loganiaceae asterids Viridiplantae
Strychnos nux-vomica 28545 Loganiaceae asterids Viridiplantae
Strychnos spinosa 99302 Loganiaceae asterids Viridiplantae

Human Protein / Gene in interaction

2 ChEMBL Protein in interactions

accession description class description compound assay ID (# of activities) # of diseases
(OMIM / KEGG)
P60033 CD81 antigen Unclassified protein CHEMBL1081584 CHEMBL1099753 (1)
1 / 1
O75496 Geminin Unclassified protein CHEMBL2135791 CHEMBL2114780 (1)
0 / 0

Related Disease

Diseases related to proteins in ChEMBL interactions

OMIM (1)

OMIM preferred title UniProt
#613496 Immunodeficiency, common variable, 6; cvid6 P60033

KEGG DISEASE (1)

KEGG disease name UniProt
H00088 Common variable immunodeficiency (CVID) P60033 (related)

Diseases related to CTD interactions

1 disease from interactions of metabolites

MeSH disease OMIM compound disease name evidence type reference
pmid
D008569 C059516 Memory Disorders therapeutic
19666019