Sus scrofa

Sus scrofa

Scientific Name	Sus scrofa [TAX:9823]
Lineage	cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
DBLINKS	KEGG GENOME: T01009

Known viruses (197)

Scientific Name	African swine fever virus [TAX:10497]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Asfuvirales; Asfarviridae; Asfivirus
RefSeq	NC_044947 African swine fever virus isolate 26544/OG10 from Italy, complete genome. NC_044948 African swine fever virus isolate Odintsovo_02/14, complete genome.
Evidence	RefSeq
Evidence	UniProt
Evidence	Literature
Reference	Genomic analysis of Sardinian 26544/OG10 isolate of African swine fever virus, D Bacciu, M Deligios, G Sanna, MP Madrau, ML Sanna… - Virology Reports, 2016 - Elsevier
Comment	Culture cell line: PBMC cells
Evidence	Literature
Reference	PMID: 31817809
Authors	Pershin A, Shevchenko I, Igolkin A, Zhukov I, Mazloum A, Aronova E, Vlasova N, Shevtsov A
Title	A Long-Term Study of the Biological Properties of ASF Virus Isolates Originating from Various Regions of the Russian Federation in 2013-2018.
Journal	Vet Sci. 2019 Dec 6;6(4).
Comment	Culture cell line: PBMC cells
DBLINKS	KEGG BRITE: NC_044947 NC_044948 ICTV: 202302618 ViralZone: family, genus

Scientific Name	Alston virus [TAX:2495433]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Rubulavirinae; Orthorubulavirus; Orthorubulavirus alstonvillense
RefSeq	NC_055508 Alston virus isolate Alstonville, complete genome.
Evidence	Literature
Reference	PMID: 30487438
Authors	Johnson RI, Tachedjian M, Rowe B, Clayton BA, Layton R, Bergfeld J, Wang LF, Marsh GA
Title	Alston Virus, a Novel Paramyxovirus Isolated from Bats Causes Upper Respiratory Tract Infection in Experimentally Challenged Ferrets.
Journal	Viruses. 2018 Nov 28;10(12).
Comment	Culture cell line: MDBK, MDCK, PK15a, HeLa, Paki, and Vero cells
DBLINKS	KEGG BRITE: NC_055508 ViralZone: genus, family

Scientific Name	Anaconda paramyxovirus [TAX:1529450]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Feraresvirinae; Ferlavirus; Ferlavirus reptilis
GenBank	KJ956407 Anaconda paramyxovirus isolate RF111111, complete genome.
Evidence	Literature
Reference	PMID: 25078906
Authors	Woo PC, Lau SK, Martelli P, Hui SW, Lau CC, Fan RY, Groff JM, Tam EW, Chan KH, Yuen KY
Title	Fatal systemic necrotizing infections associated with a novel paramyxovirus, anaconda paramyxovirus, in green anaconda juveniles.
Journal	J Clin Microbiol. 2014 Oct;52(10):3614-23.
Comment	Culture cell line: BHK21, HF, Calu-3, A549, Hep-2, Caco-2, HRT-18G, Huh-7, Hela, HEK, NT2, RD, SF268, His-1, MDCK, MDBK, RK13, 3T3, Dubca, LLC-MK2, Vero, VeroE6, CRFK, PK-15, RK3E, RMC,DF-1, C6/36 cells
DBLINKS	ViralZone: genus, family

Scientific Name	Astrovirus wild boar/WBAstV-1/2011/HUN [TAX:1137931]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; Mamastrovirus; unclassified Mamastrovirus
RefSeq	NC_016896 Astrovirus wild boar/WBAstV-1/2011/HUN, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_016896 ViralZone: genus, family

Scientific Name	avian paramyxovirus 2 [TAX:2560313]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Metaavulavirus; Metaavulavirus yucaipaense
RefSeq	NC_039230 Avian paramyxovirus 2 strain APMV-2/Chicken/California/Yucaipa/56, complete genome.
Evidence	Literature
Reference	PMID: 18603323
Authors	Subbiah M, Xiao S, Collins PL, Samal SK
Title	Complete sequence of the genome of avian paramyxovirus type 2 (strain Yucaipa) and comparison with other paramyxoviruses.
Journal	Virus Res. 2008 Oct;137(1):40-8.
Comment	Culture cell line: BHK21, BT, DF-1, HEp2, MDCK, PK15, QT35, RK13, Vero cells
DBLINKS	KEGG BRITE: NC_039230 ICTV: 202301592 ViralZone: family, genus

Scientific Name	Bastrovirus/VietNam/Porcine/17489_85 [TAX:1906173]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; unclassified Astroviridae
RefSeq	NC_032423 Bastrovirus/VietNam/Porcine/17489_85 non-structural polyprotein and structural polyprotein genes, complete cds.
Evidence	Literature
Reference	PMID: 29644096
Authors	Yinda CK, Ghogomu SM, Conceição-Neto N, Beller L, Deboutte W, Vanhulle E, Maes P, Van Ranst M, Matthijnssens J
Title	Cameroonian fruit bats harbor divergent viruses, including rotavirus H, bastroviruses, and picobirnaviruses using an alternative genetic code.
Journal	Virus Evol. 2018 Jan;4(1):vey008.
DBLINKS	KEGG BRITE: NC_032423 ViralZone: family

Scientific Name	bat adenovirus 3 [TAX:2758098]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Bat mastadenovirus A
RefSeq	NC_016895 Bat adenovirus 3 strain TJM, complete genome.
Evidence	Literature
Reference	PMID: 20089640
Authors	Li Y, Ge X, Zhang H, Zhou P, Zhu Y, Zhang Y, Yuan J, Wang LF, Shi Z
Title	Host range, prevalence, and genetic diversity of adenoviruses in bats.
Journal	J Virol. 2010 Apr;84(8):3889-97.
Comment	Culture cell line: BtMsK, MDCK, PK-15, HEK293, Vero, Vero E6 cells
DBLINKS	KEGG BRITE: NC_016895 ICTV: 202302413 ViralZone: family, genus

Scientific Name	Bat mastadenovirus WIV10 [TAX:1788432]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Bat mastadenovirus C
RefSeq	NC_029899 Bat mastadenovirus WIV10, complete genome.
Evidence	Literature
Reference	PMID: 27032099
Authors	Tan B, Yang XL, Ge XY, Peng C, Zhang YZ, Zhang LB, Shi ZL
Title	Novel bat adenoviruses with an extremely large E3 gene.
Journal	J Gen Virol. 2016 Jul;97(7):1625-1635.
Comment	Culture cell line: PK15, 293T, A549, LLC-MK2, Vero E6, Paki E9, RlKi, RcKi cells
DBLINKS	KEGG BRITE: NC_029899 ViralZone: family, genus

Scientific Name	Bat mastadenovirus WIV11 [TAX:1788433]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Bat mastadenovirus C
RefSeq	NC_029902 Bat mastadenovirus WIV11, complete genome.
Evidence	Literature
Reference	PMID: 27032099
Authors	Tan B, Yang XL, Ge XY, Peng C, Zhang YZ, Zhang LB, Shi ZL
Title	Novel bat adenoviruses with an extremely large E3 gene.
Journal	J Gen Virol. 2016 Jul;97(7):1625-1635.
Comment	Culture cell line: PK15, 293T, A549, LLC-MK2, Vero E6, Paki E9, RlKi, RcKi cells
DBLINKS	KEGG BRITE: NC_029902 ViralZone: family, genus

Scientific Name	Bat mastadenovirus WIV9 [TAX:1788436]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Bat mastadenovirus C
RefSeq	NC_029898 Bat mastadenovirus WIV9, complete genome.
Evidence	Literature
Reference	PMID: 27032099
Authors	Tan B, Yang XL, Ge XY, Peng C, Zhang YZ, Zhang LB, Shi ZL
Title	Novel bat adenoviruses with an extremely large E3 gene.
Journal	J Gen Virol. 2016 Jul;97(7):1625-1635.
Comment	Culture cell line: PK15, 293T, A549, LLC-MK2, Vero E6, Paki E9, RlKi, RcKi cells
DBLINKS	KEGG BRITE: NC_029898 ICTV: 202305655 ViralZone: family, genus

Scientific Name	Bat SARS-like coronavirus WIV1 [TAX:1415852]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Betacoronavirus pandemicum; Severe acute respiratory syndrome-related coronavirus
GenBank	KF367457 Bat SARS-like coronavirus WIV1, complete genome.
Evidence	Literature
Reference	PMID: 24172901
Authors	Ge XY, Li JL, Yang XL, Chmura AA, Zhu G, Epstein JH, Mazet JK, Hu B, Zhang W, Peng C, Zhang YJ, Luo CM, Tan B, Wang N, Zhu Y, Crameri G, Zhang SY, Wang LF, Daszak P, Shi ZL
Title	Isolation and characterization of a bat SARS-like coronavirus that uses the ACE2 receptor.
Journal	Nature. 2013 Nov 28;503(7477):535-8.
Comment	Culture cell line: Vero E6, RSKT, PK-15, A549
DBLINKS	ViralZone: genus, family

Scientific Name	Calicivirus pig/AB104/CAN [TAX:520974]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; unclassified Caliciviridae; St-Valerien swine virus
GenBank	FJ355930 Calicivirus pig/AB104/CAN, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 19396587
Authors	L'Homme Y, Sansregret R, Plante-Fortier E, Lamontagne AM, Ouardani M, Lacroix G, Simard C
Title	Genomic characterization of swine caliciviruses representing a new genus of Caliciviridae.
Journal	Virus Genes. 2009 Aug;39(1):66-75.
DBLINKS	ViralZone: family

Scientific Name	Calicivirus pig/AB90/CAN [TAX:520973]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; unclassified Caliciviridae; St-Valerien swine virus
RefSeq	NC_012699 Calicivirus pig/AB90/CAN, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_012699 ICTV: 202306505 ViralZone: family

Scientific Name	Calicivirus pig/F15-10/CAN [TAX:520975]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; unclassified Caliciviridae; St-Valerien swine virus
GenBank	FJ355929 Calicivirus pig/F15-10/CAN, complete genome.
Evidence	GenBank
Evidence	Literature
Reference	PMID: 19396587
Authors	L'Homme Y, Sansregret R, Plante-Fortier E, Lamontagne AM, Ouardani M, Lacroix G, Simard C
Title	Genomic characterization of swine caliciviruses representing a new genus of Caliciviridae.
Journal	Virus Genes. 2009 Aug;39(1):66-75.
DBLINKS	ViralZone: family

Scientific Name	Chenuda virus [TAX:40065]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus
RefSeq	NC_027534 Chenuda virus isolate EGY1954/01 segment 1 RNA-dependent RNA polymerase (VP1) gene, complete cds. NC_027535 Chenuda virus isolate EGY1954/01 segment 2 inner core protein (VP2) gene, complete cds. NC_027536 Chenuda virus isolate EGY1954/01 segment 3 capping enzyme (VP3) gene, complete cds. NC_027537 Chenuda virus isolate EGY1954/01 segment 4 outer capsid protein (VP4) gene, complete cds. NC_027538 Chenuda virus isolate EGY1954/01 segment 5 tubule protein (NS1) gene, complete cds. NC_027548 Chenuda virus isolate EGY1954/01 segment 6 outer capsid protein 2 (VP5) gene, complete cds. NC_027549 Chenuda virus isolate EGY1954/01 segment 7 viral inclusion body protein (NS2) gene, complete cds. NC_027550 Chenuda virus isolate EGY1954/01 segment 8 major core protein (VP7) gene, complete cds. NC_027551 Chenuda virus isolate EGY1954/01 segment 9 helicase (VP6) and NS4 protein (NS4) genes, complete cds. NC_027552 Chenuda virus isolate EGY1954/01 segment 10 NS3 protein (NS3) and NS3a protein (NS3a) genes, complete cds.
Evidence	Literature
Reference	PMID: 25928203
Authors	Belaganahalli MN, Maan S, Maan NS, Brownlie J, Tesh R, Attoui H, Mertens PP
Title	Genetic characterization of the tick-borne orbiviruses.
Journal	Viruses. 2015 Apr 28;7(5):2185-209.
DBLINKS	KEGG BRITE: NC_027534 NC_027535 NC_027536 NC_027537 NC_027538 NC_027548 NC_027549 NC_027550 NC_027551 NC_027552 ICTV: 202304881 ViralZone: genus, family

Scientific Name	Classical swine fever virus [TAX:11096]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pestivirus; Pestivirus suis
RefSeq	NC_002657 Classical swine fever virus, complete genome.
Evidence	Literature
Reference	PMID: 14659557
Authors	Mayer D, Thayer TM, Hofmann MA, Tratschin JD
Title	Establishment and characterisation of two cDNA-derived strains of classical swine fever virus, one highly virulent and one avirulent.
Journal	Virus Res. 2003 Dec;98(2):105-16.
DBLINKS	KEGG BRITE: NC_002657 ViralZone: genus

Scientific Name	Classical swine fever virus - Alfort/187 [TAX:358769]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pestivirus; Pestivirus suis
RefSeq	NC_038912 Classical swine fever virus, strain Alfort/187 complete genome.
Evidence	Literature
Reference	PMID: 8648680
Authors	Ruggli N, Tratschin JD, Mittelholzer C, Hofmann MA
Title	Nucleotide sequence of classical swine fever virus strain Alfort/187 and transcription of infectious RNA from stably cloned full-length cDNA.
Journal	J Virol. 1996 Jun;70(6):3478-87.
Comment	Culture cell line: SK-6(Swine Kidney cell)
DBLINKS	KEGG BRITE: NC_038912 ICTV: 202303155 ViralZone: genus

Scientific Name	Classical swine fever virus - C [TAX:358812]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pestivirus; Pestivirus suis
GenBank	Z46258 Hog cholera virus (Classical swine fever virus) 'Chinese' strain (C-strain; EP 0 351 901 B1) encoding polyprotein.
Evidence	Literature
Reference	PMID: 8551613
Authors	Moormann RJ, van Gennip HG, Miedema GK, Hulst MM, van Rijn PA
Title	Infectious RNA transcribed from an engineered full-length cDNA template of the genome of a pestivirus.
Journal	J Virol. 1996 Feb;70(2):763-70.
Comment	Culture cell line: SK6-M cells (Sus scrofa)
DBLINKS	ViralZone: genus

Scientific Name	Classical swine fever virus strain Eystrup [TAX:149596]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pestivirus; Pestivirus suis; Classical swine fever virus isolates
GenBank	AF326963 Classical swine fever virus strain Eystrup, complete genome.
Evidence	Literature
Reference	PMID: 14659557
Authors	Mayer D, Thayer TM, Hofmann MA, Tratschin JD
Title	Establishment and characterisation of two cDNA-derived strains of classical swine fever virus, one highly virulent and one avirulent.
Journal	Virus Res. 2003 Dec;98(2):105-16.
Comment	Culture cell line: SK-6 cells
DBLINKS	ViralZone: genus

Scientific Name	Cowden I virus [TAX:2849715]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Sapovirus; Sapporo virus
RefSeq	NC_000940 Cowden I virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_000940 ICTV: 202302808 ViralZone: family, genus

Scientific Name	Deltacoronavirus PDCoV/USA/Illinois133/2014 [TAX:1477411]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Deltacoronavirus; Buldecovirus; Coronavirus HKU15; Porcine coronavirus HKU15
GenBank	KJ601777 Deltacoronavirus PDCoV/USA/Illinois133/2014 from USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Deltacoronavirus PDCoV/USA/Illinois134/2014 [TAX:1477412]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Deltacoronavirus; Buldecovirus; Coronavirus HKU15; Porcine coronavirus HKU15
GenBank	KJ601778 Deltacoronavirus PDCoV/USA/Illinois134/2014 from USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Deltacoronavirus PDCoV/USA/Illinois136/2014 [TAX:1477413]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Deltacoronavirus; Buldecovirus; Coronavirus HKU15; Porcine coronavirus HKU15
GenBank	KJ601779 Deltacoronavirus PDCoV/USA/Illinois136/2014 from USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Deltacoronavirus PDCoV/USA/Ohio137/2014 [TAX:1477414]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Deltacoronavirus; Buldecovirus; Coronavirus HKU15; Porcine coronavirus HKU15
GenBank	KJ601780 Deltacoronavirus PDCoV/USA/Ohio137/2014 from USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	enterovirus D70 [TAX:12090]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus D
GenBank	D00820 Human enterovirus 70 genomic RNA, complete genome, strain: J670/71.
KEGG DISEASE	H01421 Acute hemorrhagic conjunctivitis
Evidence	Literature
Reference	PMID: 2172447
Authors	Ryan MD, Jenkins O, Hughes PJ, Brown A, Knowles NJ, Booth D, Minor PD, Almond JW
Title	The complete nucleotide sequence of enterovirus type 70: relationships with other members of the picornaviridae.
Journal	J Gen Virol. 1990 Oct;71 ( Pt 10):2291-9.
Comment	Culture cell line: HEp-2c cells
DBLINKS	KEGG GENOME: T40334 ViralZone: genus, family

Scientific Name	Enterovirus G [TAX:106966]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus
GenBank	JQ818253 Porcine enterovirus B isolate PEV-B-KOR, complete genome.
Evidence	GenBank
DBLINKS	ICTV: 202301989 ViralZone: genus, family

Scientific Name	Faeces associated gemycircularvirus 19 [TAX:1843739]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemycircularvirus; Gemycircularvirus porci1; Porcine associated gemycircularvirus 1
RefSeq	NC_030145 Faeces associated gemycircularvirus 19 isolate 49_Fec80061_pig, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_030145 ICTV: 202303575 ViralZone: family, genus

Scientific Name	Faeces associated gemycircularvirus 2 [TAX:1391031]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemycircularvirus; Gemycircularvirus porci2; Porcine associated gemycircularvirus 2
RefSeq	NC_025738 Faecal-associated gemycircularvirus 2, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_025738 ICTV: 202303576 ViralZone: family, genus

Scientific Name	Foot-and-mouth disease virus C1 [TAX:12121]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Foot-and-mouth disease virus; Foot and mouth disease virus C
GenBank	AY593805 Foot-and-mouth disease virus C1 isolate c1ober iso88, complete genome.
Evidence	UniProt
DBLINKS	ICTV: 202301961 ViralZone: family, genus

Scientific Name	Foot-and-mouth disease virus O [TAX:12118]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Foot-and-mouth disease virus
RefSeq	NC_039210 Foot-and-mouth disease virus O isolate o6pirbright iso58, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_039210 ICTV: 202301961 ViralZone: family, genus

Scientific Name	Foot-and-mouth disease virus O/ES/2001 [TAX:290057]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Foot-and-mouth disease virus; Foot-and-mouth disease virus O
GenBank	AY686687 Foot-and-mouth disease virus O/ES/2001 isolate O/ES/2001, complete genome.
Evidence	Literature
Reference	PMID: 20638368
Authors	Wang D, Fang L, Luo R, Ye R, Fang Y, Xie L, Chen H, Xiao S
Title	Foot-and-mouth disease virus leader proteinase inhibits dsRNA-induced type I interferon transcription by decreasing interferon regulatory factor 3/7 in protein levels.
Journal	Biochem Biophys Res Commun. 2010 Aug 13;399(1):72-8.
DBLINKS	ViralZone: family, genus

Scientific Name	Foot-and-mouth disease virus SAT 1 [TAX:12122]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Foot-and-mouth disease virus
GenBank	AY593840 Foot-and-mouth disease virus SAT 1 isolate sat1-3swa iso14, complete genome.
Evidence	Literature
Reference	PMID: 15858032
Authors	Carrillo C, Tulman ER, Delhon G, Lu Z, Carreno A, Vagnozzi A, Kutish GF, Rock DL
Title	Comparative genomics of foot-and-mouth disease virus.
Journal	J Virol. 2005 May;79(10):6487-504.
Comment	Culture Cell Line: porcine kidney epithelial cell
DBLINKS	ICTV: 202301961 ViralZone: family, genus

Scientific Name	Foot-and-mouth disease virus SAT 2 [TAX:35292]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus; Foot-and-mouth disease virus
GenBank	AY593847 Foot-and-mouth disease virus SAT 2 isolate sat2-1rhod iso26, complete genome.
Evidence	Literature
Reference	PMID: 15858032
Authors	Carrillo C, Tulman ER, Delhon G, Lu Z, Carreno A, Vagnozzi A, Kutish GF, Rock DL
Title	Comparative genomics of foot-and-mouth disease virus.
Journal	J Virol. 2005 May;79(10):6487-504.
Comment	Culture Cell Line: porcine kidney epithelial cell
DBLINKS	ViralZone: family, genus

Scientific Name	Henipavirus nipahense [TAX:3052225]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Henipavirus
RefSeq	NC_002728 Nipah virus, complete genome.
KEGG DISEASE	H01539 Nipah virus infection
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_002728 KEGG GENOME: T40047 ICTV: 202301611 ViralZone: family, genus

Scientific Name	Influenza A virus (A/goose/Guangdong/1/1996(H5N1)) [TAX:93838]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Alphainfluenzavirus; Alphainfluenzavirus influenzae; Influenza A virus; H5N1 subtype
RefSeq	NC_007357 Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) polymerase (PB2) gene, complete cds. NC_007358 Influenza A virus (A/goose/Guangdong/1/1996(H5N1)) polymerase (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds. NC_007359 Influenza A virus (A/goose/Guangdong/1/1996(H5N1)) polymerase (PA) and PA-X protein (PA-X) genes, complete cds. NC_007360 Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) nucleocapsid protein (NP) gene, complete cds. NC_007361 Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) neuraminidase (NA) gene, complete cds. NC_007362 Influenza A virus (A/goose/Guangdong/1/1996(H5N1)) hemagglutinin (HA) gene, complete cds. NC_007363 Influenza A virus (A/goose/Guangdong/1/1996(H5N1)) segment 7, complete sequence. NC_007364 Influenza A virus (A/goose/Guangdong/1/1996(H5N1)) segment 8, complete sequence.
KEGG DISEASE	H00399 Avian influenza; Bird flu; H5N1 flu
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_007357 NC_007358 NC_007359 NC_007360 NC_007361 NC_007362 NC_007363 NC_007364 KEGG GENOME: T40041 ViralZone: serotype, genus

Scientific Name	Influenza A virus (A/Puerto Rico/8/1934(H1N1)) [TAX:211044]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Alphainfluenzavirus; Alphainfluenzavirus influenzae; Influenza A virus; H1N1 subtype
RefSeq	NC_002016 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) segment 7, complete sequence. NC_002017 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) segment 4, complete sequence. NC_002018 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) segment 6, complete sequence. NC_002019 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) segment 5, complete sequence. NC_002020 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) segment 8, complete sequence. NC_002021 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) segment 2, complete sequence. NC_002022 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) segment 3, complete sequence. NC_002023 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) segment 1, complete sequence.
KEGG DISEASE	H00398 Influenza
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_002016 NC_002017 NC_002018 NC_002019 NC_002020 NC_002021 NC_002022 NC_002023 KEGG GENOME: T40035 ICTV: 202303956 ViralZone: serotype, genus

Scientific Name	Influenza C virus (C/Ann Arbor/1/50) [TAX:11553]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Gammainfluenzavirus; Gammainfluenzavirus influenzae; Influenza C virus
RefSeq	NC_006306 Influenza C virus (C/Ann Arbor/1/50) segment 7, complete sequence. NC_006307 Influenza C virus (C/Ann Arbor/1/50) PB2 gene for polymerase 2, complete cds. NC_006308 Influenza C virus (C/Ann Arbor/1/50) PB1 gene for polymerase 1, complete cds. NC_006309 Influenza C virus (C/Ann Arbor/1/50) P3 gene for polymerase 3, complete cds. NC_006310 Influenza C virus (C/Ann Arbor/1/50) HEF gene for hemagglutinin-esterase-fusion, complete cds. NC_006311 Influenza C virus (C/Ann Arbor/1/50) segment 5, complete sequence. NC_006312 Influenza C virus (C/Ann Arbor/1/50) M1, CM2 genes for matrix protein, CM2 protein, complete cds.
KEGG DISEASE	H00398 Influenza
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_006306 NC_006307 NC_006308 NC_006309 NC_006310 NC_006311 NC_006312 KEGG GENOME: T40040 ICTV: 202303960 ViralZone: genus

Scientific Name	Influenza D virus (D/swine/Oklahoma/1334/2011) [TAX:1173138]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Deltainfluenzavirus; Deltainfluenzavirus influenzae; Influenza D virus
RefSeq	NC_036615 Influenza D virus (D/swine/Oklahoma/1334/2011) segment 2 polymerase PB1 (PB1) gene, complete cds. NC_036616 Influenza D virus (D/swine/Oklahoma/1334/2011) segment 1 polymerase PB2 (PB2) gene, complete cds. NC_036617 Influenza D virus (D/swine/Oklahoma/1334/2011) segment 5 nucleoprotein (NP) gene, complete cds. NC_036618 Influenza D virus (D/swine/Oklahoma/1334/2011) segment 4 hemagglutinin-esterase precursor (HEF) gene, complete cds. NC_036619 Influenza D virus (D/swine/Oklahoma/1334/2011) segment 3 polymerase 3 (P3) gene, complete cds. NC_036620 Influenza D virus (D/swine/Oklahoma/1334/2011) segment 6 P42 (P42) gene, complete cds. NC_036621 Influenza D virus (D/swine/Oklahoma/1334/2011) segment 7 nonstructural protein 2 (NS2) and nonstructural protein 1 (NS1) genes, complete cds.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 23408893
Authors	Hause BM, Ducatez M, Collin EA, Ran Z, Liu R, Sheng Z, Armien A, Kaplan B, Chakravarty S, Hoppe AD, Webby RJ, Simonson RR, Li F
Title	Isolation of a novel swine influenza virus from Oklahoma in 2011 which is distantly related to human influenza C viruses.
Journal	PLoS Pathog. 2013 Feb;9(2):e1003176.
DBLINKS	KEGG BRITE: NC_036615 NC_036616 NC_036617 NC_036618 NC_036619 NC_036620 NC_036621 ICTV: 202303962 ViralZone: genus

Scientific Name	Japanese encephalitis virus [TAX:11072]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus japonicum
RefSeq	NC_001437 Japanese encephalitis virus, genome.
KEGG DISEASE	H01533 Japanese encephalitis
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001437 KEGG GENOME: T40052 ICTV: 202303087 ViralZone: genus

Scientific Name	Ledantevirus nishimuro [TAX:1978536]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Ledantevirus
RefSeq	NC_038276 Nishimuro virus viral cRNA for hypothetical proteins, complete cds.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_038276 ICTV: 202301716 ViralZone: family, genus

Scientific Name	Lelystad virus [TAX:11049]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Arnidovirineae; Arteriviridae; Variarterivirinae; Betaarterivirus; Eurpobartevirus; Betaarterivirus suid 1
RefSeq	NC_043487 Lelystad virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_043487 ICTV: 202301832 ViralZone: genus, family

Scientific Name	Louping ill virus [TAX:11086]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus loupingi
RefSeq	NC_001809 Louping ill virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001809 KEGG GENOME: T40112 ICTV: 202303096 ViralZone: genus

Scientific Name	Lyssavirus rabies [TAX:11292]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Lyssavirus
RefSeq	NC_001542 Rabies virus, complete genome.
KEGG DISEASE	H00377 Rabies
Evidence	Literature
Reference	PMID: 15297743
Authors	Sato G, Itou T, Shoji Y, Miura Y, Mikami T, Ito M, Kurane I, Samara SI, Carvalho AA, Nociti DP, Ito FH, Sakai T
Title	Genetic and phylogenetic analysis of glycoprotein of rabies virus isolated from several species in Brazil.
Journal	J Vet Med Sci. 2004 Jul;66(7):747-53.
DBLINKS	KEGG BRITE: NC_001542 KEGG GENOME: T40022 ICTV: 202301733 ViralZone: genus, family

Scientific Name	Mamastrovirus 2 [TAX:1239566]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; Mamastrovirus
RefSeq	NC_034974 Mamastrovirus 2 isolate K321, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_034974 ViralZone: genus, family

Scientific Name	Mamastrovirus 3 [TAX:1239567]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; Mamastrovirus
RefSeq	NC_025379 Mamastrovirus 3 isolate PAstV-GX1, complete genome.
Evidence	RefSeq
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_025379 ICTV: 202302628 ViralZone: genus, family

Scientific Name	Mastadenovirus porcusquartum [TAX:3241439]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus
RefSeq	NC_075965 Porcine mastadenovirus B isolate HNU1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_075965 ICTV: 202302436 ViralZone: family, genus

Scientific Name	Mastadenovirus porcusquintum [TAX:3241440]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus
RefSeq	AC_000009 Porcine adenovirus C, complete genome.
Evidence	Literature
Reference	PMID: 11172093
Authors	Nagy M, Nagy E, Tuboly T
Title	The complete nucleotide sequence of porcine adenovirus serotype 5.
Journal	J Gen Virol. 2001 Mar;82(Pt 3):525-9.
DBLINKS	KEGG BRITE: AC_000009 ViralZone: family, genus

Scientific Name	Norovirus pig/GII/Ch6/China/2009 [TAX:1088689]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GII; Norovirus GII isolates
GenBank	HQ392821 Norovirus pig/GII/Ch6/China/2009, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Orthorubulavirus suis [TAX:3052562]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Rubulavirinae; Orthorubulavirus
RefSeq	NC_009640 Porcine rubulavirus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_009640 ICTV: 202301636 ViralZone: genus, family

Scientific Name	Pasivirus A1 [TAX:1511784]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Pasivirus; Pasivirus A
RefSeq	NC_018226 Swine pasivirus 1, complete genome.
Evidence	RefSeq
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_018226 ICTV: 202302043 ViralZone: family, genus

Scientific Name	pasivirus A2 [TAX:1511785]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Pasivirus; Pasivirus A
GenBank	JX491648 Parechovirus-like virus PLV-CHN, complete genome.
Evidence	Literature
Reference	PMID: 23936384
Authors	Yu JM, Li XY, Ao YY, Li LL, Liu N, Li JS, Duan ZJ
Title	Identification of a novel picornavirus in healthy piglets and seroepidemiological evidence of its presence in humans.
Journal	PLoS One. 2013;8(8):e70137.
Comment	isolation_source="porcine feces"
DBLINKS	ICTV: 202302043 ViralZone: family, genus

Scientific Name	Paslahepevirus balayani [TAX:1678143]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Hepelivirales; Hepeviridae; Orthohepevirinae; Paslahepevirus
RefSeq	NC_074955 Paslahepevirus balayani nonstructural protein and structural viral protein genes, complete cds. NC_076565 Paslahepevirus balayani isolate AlgSwe2012, partial genome. NC_076592 Paslahepevirus balayani isolate little egret/kocsag02/2014/HUN, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_074955 NC_076565 NC_076592 ICTV: 202313887, 202313885, 202303665 ViralZone: genus, family

Scientific Name	Pig stool associated circular ssDNA virus [TAX:1249501]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Drosmacovirus; unclassified Drosmacovirus
GenBank	JX305995 Pig stool associated circular ssDNA virus isolate HUN1, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family

Scientific Name	Pig stool associated circular ssDNA virus GER2011 [TAX:1114942]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; unclassified Smacoviridae
RefSeq	NC_017916 Pig stool associated circular ssDNA virus GER2011, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_017916 ICTV: 202317985 ViralZone: family

Scientific Name	Po-Circo-like virus 21 [TAX:1105383]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae; Po-Circo-like virus
RefSeq	NC_025682 Po-Circo-like virus 21, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_025682 ICTV: 202318503 ViralZone: family

Scientific Name	Po-Circo-like virus 22 [TAX:1105384]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae; Po-Circo-like virus
GenBank	JF713717 Po-Circo-like virus 22, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family

Scientific Name	Po-Circo-like virus 41 [TAX:1105385]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae
RefSeq	NC_025683 Po-Circo-like virus 41, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_025683 ICTV: 202318506 ViralZone: family

Scientific Name	Po-Circo-like virus 51 [TAX:1105386]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae
RefSeq	NC_025684 Po-Circo-like virus 51, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_025684 ICTV: 202318511 ViralZone: family

Scientific Name	Porcine adenovirus 3 [TAX:35265]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus porcustertium
RefSeq	AC_000189 Porcine adenovirus 3, complete genome. NC_044935 Porcine adenovirus 3 strain 6618, complete genome.
Evidence	RefSeq
Evidence	UniProt
DBLINKS	KEGG BRITE: AC_000189 NC_044935 ICTV: 202302435 ViralZone: family, genus

Scientific Name	Porcine adenovirus 5 [TAX:45370]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Mastadenovirus porcusquintum
RefSeq	NC_002702 Porcine adenovirus 5, complete genome.
Evidence	Literature
Reference	PMID: 7483821
Authors	Tuboly T, Reddy PS, Nagy E, Derbyshire JB
Title	Restriction endonuclease analysis and physical mapping of the genome of porcine adenovirus type 5.
Journal	Virus Res. 1995 Jun;37(1):49-54.
Comment	Culture cell line: PK-15 (porcine kidney cell)
Evidence	Literature
Reference	PMID: 11172093
Authors	Nagy M, Nagy E, Tuboly T
Title	The complete nucleotide sequence of porcine adenovirus serotype 5.
Journal	J Gen Virol. 2001 Mar;82(Pt 3):525-9.
Comment	Culture cell line: PK-15 (porcine kidney cell)
DBLINKS	KEGG BRITE: NC_002702 ICTV: 202302437 ViralZone: family, genus

Scientific Name	Porcine associated porprismacovirus 1 [TAX:2170116]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; unclassified Porprismacovirus
RefSeq	NC_018617 Porcine associated porprismacovirus 1 isolate Cass, complete genome.
DBLINKS	KEGG BRITE: NC_018617 ICTV: 202305977 ViralZone: family

Scientific Name	Porcine associated porprismacovirus 3 [TAX:2170119]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; unclassified Porprismacovirus
RefSeq	NC_021204 Porcine associated porprismacovirus 3 isolate 3L7, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_021204 ICTV: 202305980 ViralZone: family

Scientific Name	Porcine associated porprismacovirus 4 [TAX:2170120]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; unclassified Porprismacovirus
RefSeq	NC_039071 Porcine associated porprismacovirus 4 isolate DP2, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_039071 ICTV: 202305981 ViralZone: family

Scientific Name	Porcine associated porprismacovirus 5 [TAX:2170121]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; unclassified Porprismacovirus
RefSeq	NC_024772 Porcine associated porprismacovirus 5 isolate DP3, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_024772 ICTV: 202305982 ViralZone: family

Scientific Name	Porcine associated porprismacovirus 6 [TAX:2170122]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; unclassified Porprismacovirus
RefSeq	NC_024776 Porcine associated porprismacovirus 6 isolate XP1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_024776 ICTV: 202305983 ViralZone: family

Scientific Name	Porcine associated porprismacovirus 7 [TAX:2170123]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; unclassified Porprismacovirus
RefSeq	NC_024773 Porcine associated porprismacovirus 7 isolate EP2-A, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_024773 ICTV: 202305984 ViralZone: family

Scientific Name	Porcine associated porprismacovirus 8 [TAX:2170124]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; unclassified Porprismacovirus
RefSeq	NC_024775 Porcine associated porprismacovirus 8 isolate GP2, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_024775 ICTV: 202305985 ViralZone: family

Scientific Name	Porcine associated porprismacovirus 9 [TAX:2170125]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; unclassified Porprismacovirus
RefSeq	NC_024774 Porcine associated porprismacovirus 9 isolate FP1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_024774 ICTV: 202305986 ViralZone: family

Scientific Name	Porcine astrovirus 2 [TAX:1105378]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; Mamastrovirus; unclassified Mamastrovirus
RefSeq	NC_023674 Porcine astrovirus 2 strain 43/USA, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_023674 ViralZone: genus, family

Scientific Name	Porcine astrovirus 3 [TAX:1254425]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; Mamastrovirus; unclassified Mamastrovirus
RefSeq	NC_019494 Porcine astrovirus 3 isolate US-MO123, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_019494 ViralZone: genus, family

Scientific Name	Porcine astrovirus 4 [TAX:1105379]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; Mamastrovirus; unclassified Mamastrovirus
RefSeq	NC_023675 Porcine astrovirus 4 strain 35/USA, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_023675 ViralZone: genus, family

Scientific Name	Porcine astrovirus 5 [TAX:1093928]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; unclassified Astroviridae
RefSeq	NC_023636 Porcine astrovirus 5 isolate AstV5-US-IA122, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_023636 ViralZone: family

Scientific Name	Porcine bocavirus [TAX:1165907]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Bocaparvovirus; unclassified Bocaparvovirus
RefSeq	NC_023673 Porcine bocavirus isolate swBoV CH437, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_023673 ViralZone: family, genus

Scientific Name	Porcine bocavirus 1 pig/ZJD/China/2006 [TAX:795694]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Bocaparvovirus; Bocaparvovirus ungulate2; Porcine bocavirus 1
RefSeq	NC_024453 Porcine bocavirus 1 pig/ZJD/China/2006, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_024453 ICTV: 202304250 ViralZone: family, genus

Scientific Name	Porcine bocavirus 2 pig/ZJD/China/2006 [TAX:795695]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Bocaparvovirus; Bocaparvovirus ungulate2; Porcine bocavirus 2
GenBank	HM053694 Porcine bocavirus 2 pig/ZJD/China/2006, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine bocavirus 3 [TAX:1084715]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Bocaparvovirus; Bocaparvovirus ungulate5
RefSeq	NC_016031 Porcine bocavirus 3, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 21632566
Authors	Lau SK, Woo PC, Yip CC, Li KS, Fu CT, Huang Y, Chan KH, Yuen KY
Title	Co-existence of multiple strains of two novel porcine bocaviruses in the same pig, a previously undescribed phenomenon in members of the family Parvoviridae, and evidence for inter- and intra-host genetic diversity and recombination.
Journal	J Gen Virol. 2011 Sep;92(Pt 9):2047-59.
DBLINKS	KEGG BRITE: NC_016031 ICTV: 202304253 ViralZone: family, genus

Scientific Name	Porcine bocavirus 3C [TAX:1138844]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Bocaparvovirus; Bocaparvovirus ungulate5; Porcine bocavirus 3
GenBank	JN681175 Porcine bocavirus 3C isolate pig/ZJD/China/2006, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine bocavirus 4-1 [TAX:1084717]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Bocaparvovirus; Bocaparvovirus ungulate5
RefSeq	NC_016032 Porcine bocavirus 4-1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_016032 ViralZone: family, genus

Scientific Name	Porcine bocavirus 4-2 [TAX:1084718]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Bocaparvovirus; Bocaparvovirus ungulate5
GenBank	JF429836 Porcine bocavirus 4-2 strain SH17N-2, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine bocavirus 5/JS677 [TAX:1131622]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Bocaparvovirus; unclassified Bocaparvovirus; Porcine bocavirus 5
RefSeq	NC_016647 Porcine bocavirus 5/JS677, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_016647 ViralZone: family, genus

Scientific Name	Porcine circovirus [TAX:46221]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; unclassified Circovirus
GenBank	JX524206 Porcine circovirus isolate BIV, complete genome.
Evidence	Literature
Reference	PMID: 23118451
Authors	Wen L, He K, Li B, Wang X, Guo RL, Yu Z, Mao A, Ni Y, Zhang X, Zhou J, Lv L, Jiang J
Title	In vitro and in vivo isolation of a novel rearranged porcine circovirus type 2.
Journal	J Virol. 2012 Dec;86(23):13120.
Comment	Culture cell line: PK15 (Sus scrofa kidney cell)
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine circovirus 1 [TAX:133704]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine1
RefSeq	NC_001792 Porcine circovirus 1, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001792 ICTV: 202302924 ViralZone: family, genus

Scientific Name	Porcine circovirus 2 [TAX:85708]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine2
RefSeq	NC_005148 Porcine circovirus 2, complete genome. NC_006232 Porcine circovirus 2 strain JX0301, complete genome.
Evidence	RefSeq
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_005148 NC_006232 ICTV: 202302925 ViralZone: family, genus

Scientific Name	Porcine circovirus 2 P0404c/03 [TAX:479166]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine2; Porcine circovirus 2
GenBank	EU057185 Porcine circovirus 2 P0404c/03, complete genome.
Evidence	Literature
Reference	Monroy, M. A. R., Ramirez-Nieto, G. C., Vera, V. J., Correa, J. J., & Mogollón-Galvis, J. D. (2014). Detection and molecular characterization of porcine circovirus type 2 from piglets with Porcine Circovirus Associated Diseases in Colombia. Virology journal, 11(1), 143.
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine circovirus 2 R0255/209/03 [TAX:479167]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine2; Porcine circovirus 2
GenBank	EU057189 Porcine circovirus 2 R0255/209/03, complete genome.
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine circovirus 2 S0255/210/03 [TAX:479168]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine2; Porcine circovirus 2
GenBank	EU057188 Porcine circovirus 2 S0255/210/03, complete genome.
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine circovirus 2 strain SD3 [TAX:348291]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine2; Porcine circovirus 2
GenBank	DQ218419 Porcine circovirus 2 strain SD3, complete genome.
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine circovirus 2 strain SD5 [TAX:348292]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine2; Porcine circovirus 2
GenBank	DQ218420 Porcine circovirus 2 strain SD5, complete genome.
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine circovirus 2 strain SD6 [TAX:348293]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine2; Porcine circovirus 2
GenBank	DQ218421 Porcine circovirus 2 strain SD6, complete genome.
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine circovirus 2 T0181c/03 [TAX:479169]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine2; Porcine circovirus 2
GenBank	EU057186 Porcine circovirus 2 T0181c/03, complete genome.
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine circovirus 2 U0168/03 [TAX:479170]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine2; Porcine circovirus 2
GenBank	EU057187 Porcine circovirus 2 U0168/03, complete genome.
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine circovirus 2 Z0161b/03 [TAX:479171]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine2; Porcine circovirus 2
GenBank	EU057184 Porcine circovirus 2 Z0161b/03, complete genome.
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine circovirus 3 [TAX:1868221]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine3
RefSeq	NC_031753 Porcine circovirus 3 strain 29160, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 27795441
Authors	Palinski R, Piñeyro P, Shang P, Yuan F, Guo R, Fang Y, Byers E, Hause BM
Title	A Novel Porcine Circovirus Distantly Related to Known Circoviruses Is Associated with Porcine Dermatitis and Nephropathy Syndrome and Reproductive Failure.
Journal	J Virol. 2017 Jan 1;91(1).
DBLINKS	KEGG BRITE: NC_031753 ICTV: 202305768 ViralZone: family, genus

Scientific Name	Porcine circovirus 4 [TAX:2686039]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine4
RefSeq	NC_055580 Porcine circovirus 4 strain HNU-AHG1-2019, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 31823481
Authors	Zhang HH, Hu WQ, Li JY, Liu TN, Zhou JY, Opriessnig T, Xiao CT
Title	Novel circovirus species identified in farmed pigs designated as Porcine circovirus 4, Hunan province, China.
Journal	Transbound Emerg Dis. 2020 May;67(3):1057-1061.
DBLINKS	KEGG BRITE: NC_055580 ICTV: 202309253 ViralZone: family, genus

Scientific Name	Porcine circovirus type 1/2a [TAX:720569]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; unclassified Circovirus
RefSeq	NC_013774 Porcine circovirus type 1/2a, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_013774 ViralZone: family, genus

Scientific Name	Porcine circovirus type 2-B [TAX:85709]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine2; Porcine circovirus 2
GenBank	AF112862 Porcine circovirus type 2-B, complete genome.
Evidence	Literature
Reference	PMID: 10680656
Authors	Hamel AL, Lin LL, Sachvie C, Grudeski E, Nayar GP
Title	PCR detection and characterization of type-2 porcine circovirus.
Journal	Can J Vet Res. 2000 Jan;64(1):44-52.
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine circovirus type 2-C [TAX:85543]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine2; Porcine circovirus 2
GenBank	AF109398 Porcine circovirus type 2-C, complete genome.
Evidence	Literature
Reference	PMID: 10680656
Authors	Hamel AL, Lin LL, Sachvie C, Grudeski E, Nayar GP
Title	PCR detection and characterization of type-2 porcine circovirus.
Journal	Can J Vet Res. 2000 Jan;64(1):44-52.
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine circovirus type 2-D [TAX:86385]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine2; Porcine circovirus 2
GenBank	AF117753 Porcine circovirus type 2-D, complete genome.
Evidence	Literature
Reference	PMID: 10680656
Authors	Hamel AL, Lin LL, Sachvie C, Grudeski E, Nayar GP
Title	PCR detection and characterization of type-2 porcine circovirus.
Journal	Can J Vet Res. 2000 Jan;64(1):44-52.
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine circovirus type 2-E [TAX:85544]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; Circovirus porcine2; Porcine circovirus 2
GenBank	AF109399 Porcine circovirus type 2-E, complete genome.
Evidence	Literature
Reference	PMID: 10680656
Authors	Hamel AL, Lin LL, Sachvie C, Grudeski E, Nayar GP
Title	PCR detection and characterization of type-2 porcine circovirus.
Journal	Can J Vet Res. 2000 Jan;64(1):44-52.
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine circovirus-like virus P1 [TAX:1506546]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Circovirus; unclassified Circovirus
RefSeq	NC_036593 Porcine circovirus-like virus P1 isolate PZ1, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_036593 ViralZone: family, genus

Scientific Name	Porcine coronavirus HKU15 [TAX:1159905]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Deltacoronavirus; Buldecovirus; Coronavirus HKU15
RefSeq	NC_039208 Porcine coronavirus HKU15 strain HKU15-155, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_039208 ICTV: 202301873 ViralZone: family, genus

Scientific Name	Porcine deltacoronavirus [TAX:1586324]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Deltacoronavirus; Buldecovirus; Coronavirus HKU15; Porcine coronavirus HKU15
GenBank	KP981395 Porcine deltacoronavirus strain USA/IL/2014/026PDV_P11, complete genome.
Evidence	Literature
Reference	PMID: 25817405
Authors	Chen Q, Gauger P, Stafne M, Thomas J, Arruda P, Burrough E, Madson D, Brodie J, Magstadt D, Derscheid R, Welch M, Zhang J
Title	Pathogenicity and pathogenesis of a United States porcine deltacoronavirus cell culture isolate in 5-day-old neonatal piglets.
Journal	Virology. 2015 Aug;482:51-9.
Comment	Culture cell line: Swine testicle (ST) cells
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine deltacoronavirus 8734/USA-IA/2014 [TAX:1476502]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Deltacoronavirus; Buldecovirus; Coronavirus HKU15; Porcine coronavirus HKU15
GenBank	KJ567050 Porcine deltacoronavirus 8734/USA-IA/2014, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine deltacoronavirus KNU14-04 [TAX:1559519]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Deltacoronavirus; Buldecovirus; Coronavirus HKU15; Porcine coronavirus HKU15
GenBank	KM820765 Porcine deltacoronavirus KNU14-04, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine endogenous retrovirus [TAX:61673]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Porcine type-C oncovirus
GenBank	EU523109 Porcine endogenous retrovirus clone 465D1, complete genome.
Evidence	Literature
Reference	PMID: 19543822
Authors	Kim NY, Lee D, Lee J, Park EW, Jung WW, Yang JM, Kim YB
Title	Characterization of the replication-competent porcine endogenous retrovirus class B molecular clone originated from Korean domestic pig.
Journal	Virus Genes. 2009 Oct;39(2):210-6.
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine endogenous retrovirus A [TAX:194958]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Porcine type-C oncovirus; Porcine endogenous retrovirus
GenBank	HQ540591 Porcine endogenous retrovirus A clone 907F8, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine endogenous retrovirus B [TAX:194959]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Porcine type-C oncovirus; Porcine endogenous retrovirus
GenBank	HQ540595 Porcine endogenous retrovirus B clone 1155D9, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine endogenous retrovirus C [TAX:509154]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Porcine type-C oncovirus; Porcine endogenous retrovirus
GenBank	EF133960 Porcine endogenous type C retrovirus clone 6 from China, complete genome.
Evidence	Literature
Reference	PMID: 19070900
Authors	Ma Y, Lv M, Xu S, Wu J, Tian K, Zhang J
Title	Identification of full-length proviral DNA of porcine endogenous retrovirus from Chinese Wuzhishan miniature pigs inbred.
Journal	Comp Immunol Microbiol Infect Dis. 2010 Jul;33(4):323-31.
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine endogenous retrovirus E [TAX:168238]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Porcine type-C oncovirus; Porcine endogenous retrovirus
RefSeq	NC_003059 Porcine endogenous retrovirus E, complete genome.
Evidence	Literature
Reference	PMID: 11457988
Authors	Mang R, Maas J, Chen X, Goudsmit J, van Der Kuyl AC
Title	Identification of a novel type C porcine endogenous retrovirus: evidence that copy number of endogenous retroviruses increases during host inbreeding.
Journal	J Gen Virol. 2001 Aug;82(Pt 8):1829-34.
DBLINKS	KEGG BRITE: NC_003059 ICTV: 202305019 ViralZone: family, genus

Scientific Name	Porcine enterovirus 9 [TAX:64141]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus G
RefSeq	NC_004441 Porcine enterovirus 9 strain UKG/410/73 polyprotein gene, complete cds.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_004441 ICTV: 202301989 ViralZone: genus, family

Scientific Name	Porcine epidemic diarrhea virus [TAX:28295]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus
RefSeq	NC_003436 Porcine epidemic diarrhea virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_003436 ICTV: 202301857 ViralZone: family, genus

Scientific Name	Porcine epidemic diarrhea virus L00721/GER/2014 [TAX:1525377]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus
GenBank	LM645057 Porcine epidemic diarrhea virus L00721/GER/2014, complete genome.
Evidence	Literature
Reference	PMID: 25695311
Authors	Hanke D, Jenckel M, Petrov A, Ritzmann M, Stadler J, Akimkin V, Blome S, Pohlmann A, Schirrmeier H, Beer M, Höper D
Title	Comparison of porcine epidemic diarrhea viruses from Germany and the United States, 2014.
Journal	Emerg Infect Dis. 2015 Mar;21(3):493-6.
Comment	Culture cell line: PK-15 (Porcine Kidney cells) and Vero (African green monkey kidney cells)
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine feces-associated gemycircularvirus [TAX:2017712]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemykibivirus; Gemykibivirus anima1
RefSeq	NC_035477 Porcine feces-associated gemycircularvirus isolate BEL/15V010, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_035477 ICTV: 202309062 ViralZone: family, genus

Scientific Name	Porcine hemagglutinating encephalomyelitis virus [TAX:42005]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Betacoronavirus 1
GenBank	DQ011855 Porcine hemagglutinating encephalomyelitis virus strain VW572, complete genome.
Evidence	Literature
Reference	PMID: 16809333
Authors	Vijgen L, Keyaerts E, Lemey P, Maes P, Van Reeth K, Nauwynck H, Pensaert M, Van Ranst M
Title	Evolutionary history of the closely related group 2 coronaviruses: porcine hemagglutinating encephalomyelitis virus, bovine coronavirus, and human coronavirus OC43.
Journal	J Virol. 2006 Jul;80(14):7270-4.
DBLINKS	ViralZone: genus, family

Scientific Name	Porcine hokovirus [TAX:494652]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Tetraparvovirus; Tetraparvovirus ungulate2
RefSeq	NC_038546 Porcine hokovirus strain HK7 non-structural protein (NS1), minor structural protein (VP1), and major structural protein (VP2) genes, complete cds.
Evidence	Literature
Reference	PMID: 20653980
Authors	Adlhoch C, Kaiser M, Ellerbrok H, Pauli G
Title	High prevalence of porcine Hokovirus in German wild boar populations.
Journal	Virol J. 2010 Jul 25;7:171.
Evidence	Literature
Reference	PMID: 21964922
Authors	Cadar D, Cságola A, Lorincz M, Tombácz K, Spînu M, Tuboly T
Title	Distribution and genetic diversity of porcine hokovirus in wild boars.
Journal	Arch Virol. 2011 Dec;156(12):2233-9.
DBLINKS	KEGG BRITE: NC_038546 ICTV: 202304282 ViralZone: genus, family

Scientific Name	Porcine kobuvirus [TAX:1156769]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Kodimesavirinae; Kobuvirus; Kobuvirus cebes
RefSeq	NC_027054 Porcine kobuvirus isolate JS-02a-CHN/2014/China, complete genome.
Evidence	Other
Comment	piglets => pig
DBLINKS	KEGG BRITE: NC_027054 ViralZone: family, genus

Scientific Name	Porcine kobuvirus SH-W-CHN/2010/China [TAX:1136133]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Kodimesavirinae; Kobuvirus; Kobuvirus cebes; Porcine kobuvirus
RefSeq	NC_016769 Porcine kobuvirus SH-W-CHN/2010/China, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_016769 ViralZone: family, genus

Scientific Name	Porcine kobuvirus swine/K-30-HUN/2008/HUN [TAX:703582]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Kodimesavirinae; Kobuvirus; Kobuvirus cebes; Porcine kobuvirus
GenBank	GQ249161 Porcine kobuvirus swine/K-30-HUN/2008/HUN, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Porcine kobuvirus swine/S-1-HUN/2007/Hungary [TAX:569195]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Kodimesavirinae; Kobuvirus; Kobuvirus cebes
RefSeq	NC_011829 Porcine kobuvirus swine/S-1-HUN/2007/Hungary, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_011829 ICTV: 202302017 ViralZone: family, genus

Scientific Name	Porcine partetravirus [TAX:1208310]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; unclassified Parvovirinae
RefSeq	NC_022104 Porcine partetravirus strain FMV10-1437266, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_022104 ViralZone: family

Scientific Name	Porcine parvovirus [TAX:10796]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Protoparvovirus; Protoparvovirus ungulate1
RefSeq	NC_001718 Porcine parvovirus, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 8212598
Authors	Bergeron J, Menezes J, Tijssen P
Title	Genomic organization and mapping of transcription and translation products of the NADL-2 strain of porcine parvovirus.
Journal	Virology. 1993 Nov;197(1):86-98.
Comment	PMID:8642680
DBLINKS	KEGG BRITE: NC_001718 ICTV: 202304277 ViralZone: family, genus

Scientific Name	Porcine parvovirus 2 [TAX:1126383]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Tetraparvovirus; Tetraparvovirus ungulate3
RefSeq	NC_025965 Porcine parvovirus 2 strain BR/GO/ion_09_PPV-2/2011, complete genome. NC_038883 Parvovirus YX-2010/CHN isolate CnPPV_JH13 nonstructural protein and structural protein genes, complete cds.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_025965 NC_038883 ICTV: 202304283 ViralZone: genus, family

Scientific Name	Porcine parvovirus 4 [TAX:707546]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Copiparvovirus; Copiparvovirus ungulate2
RefSeq	NC_014665 Porcine parvovirus 4, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_014665 ICTV: 202304256 ViralZone: family, genus

Scientific Name	Porcine parvovirus 5 [TAX:1241957]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Protoparvovirus; unclassified Protoparvovirus
RefSeq	NC_023020 Porcine parvovirus 5 isolate IA469 clone 1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_023020 ViralZone: family, genus

Scientific Name	Porcine parvovirus 6 [TAX:1472911]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Copiparvovirus; Copiparvovirus ungulate4
RefSeq	NC_023860 Porcine parvovirus 6 isolate TJ, complete genome. NC_075986 Porcine parvovirus 6 strain P15-1 nonstructural protein (QKJ52_gp1) and capsid protein (QKJ52_gp2) genes, complete cds.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_023860 NC_075986 ICTV: 202307341 ViralZone: family, genus

Scientific Name	Porcine parvovirus 7 [TAX:1820046]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Hamaparvovirinae; Chaphamaparvovirus; Chaphamaparvovirus ungulate1
RefSeq	NC_040562 Porcine parvovirus 7 isolate GX49, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_040562 ICTV: 202307328 ViralZone: family

Scientific Name	Porcine pestivirus isolate Bungowannah [TAX:412969]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Pestivirus; Pestivirus australiaense
RefSeq	NC_023176 Porcine pestivirus isolate Bungowannah, complete genome.
DBLINKS	KEGG BRITE: NC_023176 ICTV: 202305781 ViralZone: genus

Scientific Name	Porcine picobirnavirus [TAX:442302]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Duplopiviricetes; Durnavirales; Picobirnaviridae; Picobirnavirus; unclassified Picobirnavirus
RefSeq	NC_029801 Porcine picobirnavirus strain 221/04-16/ITA/2004 clone LA-5 segment L, complete sequence. NC_029802 Porcine picobirnavirus strain 221/04-16/ITA/2004 segment S, complete sequence.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_029801 NC_029802 ViralZone: family

Scientific Name	Porcine reproductive and respiratory syndrome virus [TAX:28344]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Arnidovirineae; Arteriviridae; Variarterivirinae; Betaarterivirus; Ampobartevirus; Betaarterivirus americense
RefSeq	NC_001961 Porcine respiratory and reproductive syndrome virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001961 ViralZone: genus, family

Scientific Name	porcine reproductive and respiratory syndrome virus 1 [TAX:1965066]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Arnidovirineae; Arteriviridae; Variarterivirinae; Betaarterivirus; Eurpobartevirus; Betaarterivirus europensis
GenBank	AF046869 Porcine reproductive and respiratory syndrome virus 1 isolate 16244B, 2/18/97(Nebraska)pass.3, complete genome. M96262 Porcine reproductive and respiratory syndrome virus 1, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Porcine reproductive and respiratory syndrome virus 2 [TAX:1965067]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Arnidovirineae; Arteriviridae; Variarterivirinae; Betaarterivirus; Ampobartevirus; Betaarterivirus americense
RefSeq	NC_038291 Porcine reproductive and respiratory syndrome virus 2, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_038291 ICTV: 202301833 ViralZone: genus, family

Scientific Name	Porcine respiratory coronavirus ISU-1 [TAX:398815]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus; Alphacoronavirus 1; Transmissible gastroenteritis virus; Porcine respiratory coronavirus
GenBank	DQ811787 PRCV ISU-1, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	porcine sapelovirus 1 [TAX:1002921]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Sapelovirus; Sapelovirus A
RefSeq	NC_003987 Porcine sapelovirus 1, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_003987 ICTV: 202302058 ViralZone: family, genus

Scientific Name	Porcine stool-associated circular virus 2 [TAX:1328031]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; Porprismacovirus porci2
RefSeq	NC_021203 Porcine stool-associated circular virus 2 isolate f, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_021203 ICTV: 202305979 ViralZone: family

Scientific Name	Porcine stool-associated circular virus 3 [TAX:1328032]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; Porprismacovirus porci3
GenBank	KC545229 Porcine stool-associated circular virus 3 isolate 4L5, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family

Scientific Name	Porcine stool-associated circular virus 4 [TAX:1475062]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae
RefSeq	NC_023877 Porcine stool-associated circular virus 4 isolate CP2, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_023877 ViralZone: family

Scientific Name	Porcine stool-associated circular virus 5 [TAX:1475063]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae
RefSeq	NC_023878 Porcine stool-associated circular virus 5 isolate CP3, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_023878 ViralZone: family

Scientific Name	Porcine stool-associated circular virus 7 [TAX:1537166]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; Porprismacovirus porci7
GenBank	KJ577815 Porcine stool-associated circular virus 7 isolate EP3-D, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family

Scientific Name	Porcine stool-associated circular virus/BEL/15V010 [TAX:2017724]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae
RefSeq	NC_035476 Porcine stool-associated circular virus/BEL/15V010 isolate 15V010, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_035476 ViralZone: family

Scientific Name	Porcine torovirus [TAX:237020]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Tornidovirineae; Tobaniviridae; Torovirinae; Torovirus; Renitovirus
RefSeq	NC_022787 Porcine torovirus strain SH1, complete genome.
DBLINKS	KEGG BRITE: NC_022787 ICTV: 202301890 ViralZone: genus, family

Scientific Name	Posavirus 1 [TAX:1105380]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; unclassified Picornavirales; Posavirus
RefSeq	NC_023637 Posavirus 1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_023637

Scientific Name	Posavirus 2 [TAX:1105381]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; unclassified Picornavirales; Posavirus
RefSeq	NC_023638 Posavirus 2, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_023638

Scientific Name	Posavirus 3 [TAX:1663127]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; unclassified Picornavirales; Posavirus
RefSeq	NC_028240 Posavirus 3 strain 958-4, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_028240

Scientific Name	Posavirus sp. [TAX:1930510]
Lineage	Viruses; unclassified viruses
RefSeq	NC_032412 Posavirus sp. isolate 17489_95_2, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_032412

Scientific Name	PoSCV Kor J481 [TAX:1488557]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus; unclassified Porprismacovirus
RefSeq	NC_024119 PoSCV Kor J481, complete genome.
Evidence	Literature
Reference	PMID: 24170425
Authors	Kim AR, Chung HC, Kim HK, Kim EO, Nguyen VG, Choi MG, Yang HJ, Kim JA, Park BK
Title	Characterization of a complete genome of a circular single-stranded DNA virus from porcine stools in Korea.
Journal	Virus Genes. 2014 Feb;48(1):81-8.
DBLINKS	KEGG BRITE: NC_024119 ViralZone: family

Scientific Name	Rabbitpox virus [TAX:32606]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus; Vaccinia virus
GenBank	AY484669 Rabbitpox virus, complete genome.
Evidence	Literature
Reference	PMID: 16227218
Authors	Li G, Chen N, Roper RL, Feng Z, Hunter A, Danila M, Lefkowitz EJ, Buller RM, Upton C
Title	Complete coding sequences of the rabbitpox virus genome.
Journal	J Gen Virol. 2005 Nov;86(Pt 11):2969-77.
Comment	Culture cell line: PK15 (pig kidney cell)
DBLINKS	ViralZone: genus, family

Scientific Name	Reston ebolavirus [TAX:186539]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Filoviridae; Orthoebolavirus; Orthoebolavirus restonense
RefSeq	NC_004161 Reston ebolavirus isolate Reston virus/M.fascicularis-tc/USA/1989/Philippines89-Pennsylvania, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_004161 KEGG GENOME: T40013 ICTV: 202301566 ViralZone: genus, family

Scientific Name	Sagiyama virus [TAX:59303]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus; Getah virus
GenBank	AB032553 Sagiyama virus genomic RNA, complete genome.
Evidence	UniProt
DBLINKS	ICTV: 202305092 ViralZone: family, genus

Scientific Name	Sapelovirus A [TAX:686984]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Sapelovirus
GenBank	HQ875059 Porcine sapelovirus strain csh, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Sapovirus pig/Gansu/CH430/2012/CHN [TAX:1401324]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Sapovirus; Sapporo virus; Sapovirus isolates
GenBank	KF204570 Sapovirus pig/Gansu/CH430/2012/CHN, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Sapovirus pig/GVI/OH-JJ674/2000/US [TAX:1471436]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Sapovirus; Sapporo virus; Sapovirus GVI
GenBank	KJ508818 Sapovirus pig/GVI/OH-JJ674/2000/US, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Sapovirus pig/sav1/2008/CHN [TAX:638664]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Sapovirus; Sapporo virus; Sapovirus isolates
GenBank	FJ387164 Sapovirus pig/sav1/2008/CHN, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Senecavirus A [TAX:390157]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Senecavirus; Senecavirus valles
RefSeq	NC_011349 Seneca valley virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_011349 ICTV: 202302061 ViralZone: family, genus

Scientific Name	Streptococcus phage phi-SsuFJNP3_rum [TAX:2664390]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270260 Streptococcus phage phi-SsuFJNP3_rum, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phi-SsuFJNP9_rum [TAX:2664392]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270262 Streptococcus phage phi-SsuFJNP9_rum, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phi-SsuFJSM8_rum [TAX:2664395]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270265 Streptococcus phage phi-SsuFJSM8_rum, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phi-SsuFJZZ32_rum [TAX:2664396]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270266 Streptococcus phage phi-SsuFJZZ32_rum, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phi-SsuFJZZ39_rum [TAX:2664397]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270267 Streptococcus phage phi-SsuFJZZ39_rum, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phi-SsuHCJ31_comEC [TAX:2664398]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270268 Streptococcus phage phi-SsuHCJ31_comEC, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phi-SsuHCJ3_rum [TAX:2664399]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270269 Streptococcus phage phi-SsuHCJ3_rum, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phi-SsuJS7_SSU0237 [TAX:2664400]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270270 Streptococcus phage phi-SsuJS7_SSU0237, partial genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phi-SsuNJ2_rum [TAX:2664401]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270271 Streptococcus phage phi-SsuNJ2_rum, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phi-SsuNJ5_rum [TAX:2664402]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270272 Streptococcus phage phi-SsuNJ5_rum, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phi-SsuSC05017_rum [TAX:2664403]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270273 Streptococcus phage phi-SsuSC05017_rum, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phi-SsuSH0918_comEC [TAX:2664404]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270274 Streptococcus phage phi-SsuSH0918_comEC, partial genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phi-SsuSSJ27_rum [TAX:2664405]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270275 Streptococcus phage phi-SsuSSJ27_rum, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phi-SsuSSJ28_rum [TAX:2664406]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270276 Streptococcus phage phi-SsuSSJ28_rum, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phi-SsuYZDH5_rum [TAX:2664408]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270278 Streptococcus phage phi-SsuYZDH5_rum, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phi-SsuZKB4_rum [TAX:2664409]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	MN270279 Streptococcus phage phi-SsuZKB4_rum, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phiNJ3 [TAX:1701259]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	KT336320 Streptococcus phage phiNJ3, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Streptococcus phage phiSC070807 [TAX:1701260]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; unclassified Caudoviricetes
GenBank	KT336321 Streptococcus phage phiSC070807, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: class, class, class

Scientific Name	Suid alphaherpesvirus 1 [TAX:10345]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Alphaherpesvirinae; Varicellovirus; Varicellovirus suidalpha1
RefSeq	NC_006151 Suid herpesvirus 1, complete genome. NC_075689 Suid herpesvirus 1 strain Kaplan, complete genome.
Evidence	RefSeq
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_006151 NC_075689 ICTV: 202301456 ViralZone: family, genus

Scientific Name	Suid betaherpesvirus 2 [TAX:1608255]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Betaherpesvirinae; Roseolovirus; Roseolovirus suidbeta2
RefSeq	NC_022233 Porcine cytomegalovirus strain BJ09, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 25010282
Authors	Gu W, Zeng N, Zhou L, Ge X, Guo X, Yang H
Title	Genomic organization and molecular characterization of porcine cytomegalovirus.
Journal	Virology. 2014 Jul;460-461:165-72.
DBLINKS	KEGG BRITE: NC_022233 ICTV: 202301479 ViralZone: family, genus

Scientific Name	Sus scrofa papillomavirus 2 [TAX:2025338]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; unclassified Papillomaviridae; non-primate mammal papillomaviruses
RefSeq	NC_035478 Sus scrofa papillomavirus 2 isolate DE1018-16, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_035478 ViralZone: family

Scientific Name	Sus scrofa polyomavirus 1 [TAX:1680894]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; Alphapolyomavirus; Alphapolyomavirus suis
RefSeq	NC_040598 Sus scrofa polyomavirus 1 isolate 471, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_040598 ICTV: 202309585 ViralZone: genus, family

Scientific Name	Swine cyclovirus [TAX:1573583]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; Cyclovirus nhanloai; Human associated cyclovirus 8; Cyclovirus VN
GenBank	KM392286 Swine cyclovirus strain SC_CGS77, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Swine deltacoronavirus OhioCVM1/2014 [TAX:1525854]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Deltacoronavirus; Buldecovirus; Coronavirus HKU15; Porcine coronavirus HKU15
GenBank	KJ769231 Swine deltacoronavirus OhioCVM1/2014, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Swine enteric coronavirus [TAX:1766554]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus; Alphacoronavirus 1
RefSeq	NC_028806 Swine enteric coronavirus strain Italy/213306/2009, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_028806 ViralZone: family, genus

Scientific Name	Swine hepatitis E virus [TAX:63421]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Hepelivirales; Hepeviridae; Orthohepevirinae; Paslahepevirus; Paslahepevirus balayani
GenBank	AB073912 Swine hepatitis E virus genomic RNA, complete genome.
DBLINKS	ViralZone: genus, family

Scientific Name	Swine parainfluenza virus 3 [TAX:505220]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Feraresvirinae; Respirovirus; unclassified Respirovirus
GenBank	EU439428 Swine parainfluenza virus 3 isolate 92-7783_ISU-92, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Swine vesicular disease virus [TAX:12075]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus B
GenBank	AY429470 Swine vesicular disease virus strain HK'70, complete genome.
DBLINKS	ViralZone: genus, family

Scientific Name	Swine vesicular disease virus (STRAIN H/3 '76) [TAX:12076]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus B; Swine vesicular disease virus
GenBank	D00435 Swine vesicular disease virus (STRAIN H/3 '76) genomic RNA, complete genome.
Evidence	UniProt
DBLINKS	ViralZone: genus, family

Scientific Name	Swinepox virus [TAX:10276]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Suipoxvirus
RefSeq	NC_003389 Swinepox virus, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 11752168
Authors	Afonso CL, Tulman ER, Lu Z, Zsak L, Osorio FA, Balinsky C, Kutish GF, Rock DL
Title	The genome of swinepox virus.
Journal	J Virol. 2002 Jan;76(2):783-90.
DBLINKS	KEGG BRITE: NC_003389 ICTV: 202304784 ViralZone: genus, family

Scientific Name	Teschovirus A [TAX:118140]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Teschovirus
RefSeq	NC_003985 Porcine teschovirus 1, complete genome. NC_075980 Teschovirus A isolate HuN41 polyprotein (QKJ46_gp1) gene, complete cds.
Evidence	RefSeq
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_003985 NC_075980 ICTV: 202302065, 202307451 ViralZone: family, genus

Scientific Name	teschovirus A4 [TAX:138681]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Teschovirus; Teschovirus A
GenBank	JQ975417 Porcine teschovirus 4 isolate 10BJ02, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	teschovirus A8 [TAX:363168]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Teschovirus; Teschovirus A
GenBank	JN710381 Porcine teschovirus 8 strain Jilin/2003/2, complete genome.
Evidence	Literature
Reference	PMID: 20362007
Authors	Zhang CF, Cui SJ, Hu S, Zhang Z, Guo Q, Zell R
Title	Isolation and characterization of the first Chinese strain of porcine Teschovirus-8.
Journal	J Virol Methods. 2010 Aug;167(2):208-13.
Comment	Culture cell line: PK-15 (swine kidney cells) and ST (swine testicular cells)
DBLINKS	ViralZone: family, genus

Scientific Name	Tetraparvovirus ungulate3 [TAX:3052773]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Tetraparvovirus
RefSeq	NC_035180 Ungulate tetraparvovirus 3 isolate Tedej, complete genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 26974825
Authors	Cságola A, Zádori Z, Mészáros I, Tuboly T
Title	Detection of Porcine Parvovirus 2 (Ungulate Tetraparvovirus 3) Specific Antibodies and Examination of the Serological Profile of an Infected Swine Herd.
Journal	PLoS One. 2016;11(3):e0151036.
DBLINKS	KEGG BRITE: NC_035180 ViralZone: genus, family

Scientific Name	Torque teno sus virus 1a [TAX:687386]
Lineage	Viruses; Viruses incertae sedis; Anelloviridae; Iotatorquevirus; Iotatorquevirus suida1a
RefSeq	NC_014070 Torque teno sus virus 1a, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_014070 ICTV: 202302556 ViralZone: genus, family

Scientific Name	Torque teno sus virus 1b [TAX:687387]
Lineage	Viruses; Viruses incertae sedis; Anelloviridae; Iotatorquevirus
RefSeq	NC_027059 Torque teno sus virus 1b isolate 1p, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_027059 ViralZone: genus, family

Scientific Name	Torque teno sus virus k2a [TAX:1968861]
Lineage	Viruses; Viruses incertae sedis; Anelloviridae; Kappatorquevirus; Kappatorquevirus suidak2a
RefSeq	NC_014092 Torque teno sus virus k2a isolate 2p, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_014092 ICTV: 202302559 ViralZone: family, genus

Scientific Name	Torque teno sus virus k2b [TAX:1239832]
Lineage	Viruses; Viruses incertae sedis; Anelloviridae; Kappatorquevirus; Kappatorquevirus suidak2b
RefSeq	NC_038363 Torque teno sus virus k2b isolate 38E23, complete genome.
Evidence	RefSeq
Evidence	UniProt
Evidence	Literature
Reference	PMID: 22956737
Authors	Cornelissen-Keijsers V, Jiménez-Melsió A, Sonnemans D, Cortey M, Segalés J, van den Born E, Kekarainen T
Title	Discovery of a novel Torque teno sus virus species: genetic characterization, epidemiological assessment and disease association.
Journal	J Gen Virol. 2012 Dec;93(Pt 12):2682-2691.
DBLINKS	KEGG BRITE: NC_038363 ICTV: 202302560 ViralZone: family, genus

Scientific Name	Torque teno sus virus SH0822/2008 [TAX:742012]
Lineage	Viruses; Viruses incertae sedis; Anelloviridae; Iotatorquevirus; unclassified Iotatorquevirus
GenBank	GU450331 Torque teno sus virus SH0822/2008, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Transmissible gastroenteritis virus [TAX:11149]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus; Alphacoronavirus 1
RefSeq	NC_038861 Transmissible gastroenteritis virus complete genome, genomic RNA.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_038861 ICTV: 202301849 ViralZone: family, genus

Scientific Name	Vesicular exanthema of swine virus [TAX:35612]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Vesivirus
RefSeq	NC_002551 Vesicular exanthema of swine virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_002551 ICTV: 202302811 ViralZone: family, genus

Scientific Name	Vesicular stomatitis Indiana virus [TAX:11277]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Vesiculovirus; Vesiculovirus indiana
RefSeq	NC_001560 Vesicular stomatitis Indiana virus, complete genome. NC_038236 Vesicular stomatitis Indiana virus strain 98COE, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001560 NC_038236 ICTV: 202301794 ViralZone: genus, family

Scientific Name	VESV-like calicivirus [TAX:82664]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Vesivirus; Vesicular exanthema of swine virus
GenBank	AF091736 VESV-like calicivirus strain Pan-1, complete genome.
Evidence	Literature
Reference	PMID: 10076521
Authors	Rinehart-Kim JE, Zhong WM, Jiang X, Smith AW, Matson DO
Title	Complete nucleotide sequence and genomic organization of a primate calicivirus, Pan-1.
Journal	Arch Virol. 1999;144(1):199-208.
Comment	Culture cell line: PK15 (porcine kidney cells)
DBLINKS	ViralZone: family, genus

Scientific Name	Wad Medani virus [TAX:40067]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus
RefSeq	NC_027533 Wad Medani virus isolate SUD1952/01 segment 1 RNA-dependent RNA polymerase (VP1) gene, complete cds. NC_027539 Wad Medani virus isolate SUD1952/01 segment 2 inner core protein (VP2) gene, complete cds. NC_027540 Wad Medani virus isolate SUD1952/01 segment 3 capping enzyme (VP3) gene, complete cds. NC_027541 Wad Medani virus isolate SUD1952/01 segment 4 outer capsid protein (VP4) gene, complete cds. NC_027542 Wad Medani virus isolate SUD1952/01 segment 5 tubule protein (NS1) gene, complete cds. NC_027543 Wad Medani virus isolate SUD1952/01 segment 6 outer capsid protein 2 (VP5) gene, complete cds. NC_027544 Wad Medani virus isolate SUD1952/01 segment 7 viral inclusion body protein (NS2) gene, complete cds. NC_027545 Wad Medani virus isolate SUD1952/01 segment 8 major core protein (VP7) gene, complete cds. NC_027546 Wad Medani virus isolate SUD1952/01 segment 9 helicase (VP6) and NS4 protein (NS4) genes, complete cds. NC_027547 Wad Medani virus isolate SUD1952/01 segment 10 NS3 protein (NS3) and NS3a protein (NS3a) genes, complete cds.
Evidence	Literature
Reference	Isolation and characterization of Wad Medani virus obtained in the tuva Republic of Russia
Comment	Culture cell line: PEK, Vero, and BHK
DBLINKS	KEGG BRITE: NC_027533 NC_027539 NC_027540 NC_027541 NC_027542 NC_027543 NC_027544 NC_027545 NC_027546 NC_027547 ICTV: 202304895 ViralZone: genus, family