Major hosts - Animal

[Animal|Plant|Other Eukaryotes|Bacteria|Archaea] One-click mode
9606   
Homo sapiens (1238 known viruses)
  • Viruses (1238)
    • dsDNA viruses, no RNA stage (311)
      • Adenoviridae (88)
        • Mastadenovirus (88)
          • 129875 
            Human mastadenovirus A (5)
          • 108098 
            Human mastadenovirus B (31)
            • 459785 
              Human adenovirus 3+11p
            • 260047 
              Human adenovirus 3+7
            • 107462 
              Human adenovirus 50
            • 714978 
              Human adenovirus 55
            • Human adenovirus B1 (6)
            • Human adenovirus B2 (5)
              • Human adenovirus 11 (1)
              • 1461395
                Human adenovirus 11+34
              • 10521  
                Human adenovirus 14
              • 10548  
                Human adenovirus 34
              • 10522  
                Human adenovirus 35
            • 45659  
              Human adenovirus B3
            • 585083 
              Simian adenovirus 27.1
            • 585084 
              Simian adenovirus 27.2
            • 585085 
              Simian adenovirus 28.1
            • 585086 
              Simian adenovirus 28.2
            • 585063 
              Simian adenovirus 29
            • 585066 
              Simian adenovirus 32
            • 585067 
              Simian adenovirus 33
            • 585089 
              Simian adenovirus 35.1
            • 585090 
              Simian adenovirus 35.2
            • 585095 
              Simian adenovirus 41.1
            • 585096 
              Simian adenovirus 41.2
            • 585080 
              Simian adenovirus 46
            • 585081 
              Simian adenovirus 47
            • unclassified Human adenovirus B (1)
          • 129951 
            Human mastadenovirus C (16)
          • 130310 
            Human mastadenovirus D (22)
          • 130308 
            Human mastadenovirus E (10)
            • 28280  
              Human adenovirus E4
            • Simian adenovirus 25 (1)
              • 585082 
                Simian adenovirus 25.2
            • 585060 
              Simian adenovirus 26
            • 585064 
              Simian adenovirus 30
            • 585070 
              Simian adenovirus 36
            • Simian adenovirus 37 (2)
              • 585091 
                Simian adenovirus 37.1
              • 585092 
                Simian adenovirus 37.2
            • 585072 
              Simian adenovirus 38
            • 585073 
              Simian adenovirus 39
          • 130309 
            Human mastadenovirus F (2)
            • 10524  
              Human adenovirus 41
          • Human mastadenovirus G (1)
          • Platyrrhini mastadenovirus A (1)
            • 994672 
              Titi monkey adenovirus ECC-2011
      • Herpesvirales (15)
        • Herpesviridae (15)
          • Alphaherpesvirinae (7)
            • Simplexvirus (5)
              • 10317  
                Cercopithecine alphaherpesvirus 2
              • 10298  
                Human alphaherpesvirus 1
              • 10310  
                Human alphaherpesvirus 2
              • 10325  
                Macacine alphaherpesvirus 1
              • 340907 
                Papiine alphaherpesvirus 2
            • Varicellovirus (2)
              • 10335  
                Human alphaherpesvirus 3 (2)
                • 10338  
                  Human herpesvirus 3 strain Dumas
          • Betaherpesvirinae (5)
            • Cytomegalovirus (2)
              • 50292  
                Cercopithecine betaherpesvirus 5
              • 10359  
                Human betaherpesvirus 5
            • Roseolovirus (3)
              • 32603  
                Human betaherpesvirus 6A
              • 32604  
                Human betaherpesvirus 6B
              • 10372  
                Human betaherpesvirus 7
          • Gammaherpesvirinae (3)
            • Lymphocryptovirus (2)
              • 10376  
                Human gammaherpesvirus 4 (2)
                • 12509  
                  Human herpesvirus 4 type 2
            • Rhadinovirus (1)
              • 37296  
                Human gammaherpesvirus 8
      • Papillomaviridae (172)
        • Firstpapillomavirinae (169)
          • Alphapapillomavirus (69)
            • Alphapapillomavirus 1 (2)
              • 333763 
                Human papillomavirus type 32
              • 10590  
                Human papillomavirus type 42
            • Alphapapillomavirus 10 (7)
              • 10580  
                Human papillomavirus type 11
              • 10573  
                Human papillomavirus type 13
              • 10592  
                Human papillomavirus type 44
              • 37114  
                Human papillomavirus type 55
              • 31552  
                Human papillomavirus type 6
              • 37122  
                Human papillomavirus type 6a
              • 10600  
                Human papillomavirus type 6b
            • Alphapapillomavirus 11 (1)
              • 333764 
                Human papillomavirus type 34
            • Alphapapillomavirus 13 (1)
              • 1671798
                Human papillomavirus type 54
            • Alphapapillomavirus 14 (3)
              • 338326 
                Human papillomavirus type 106
              • 120686 
                Human papillomavirus type 71
              • 333769 
                Human papillomavirus type 90
            • Alphapapillomavirus 2 (8)
              • 720708 
                Human papillomavirus 117
              • 673323 
                Human papillomavirus 125
              • 37111  
                Human papillomavirus 28
              • 37112  
                Human papillomavirus 29
              • 10614  
                Human papillomavirus 3
              • 260717 
                Human papillomavirus 94
              • 333759 
                Human papillomavirus type 10
              • 1288116
                Human papillomavirus type XS2
            • 333767 
              Alphapapillomavirus 3 (11)
              • 338327 
                Human papillomavirus type 102
              • 735496 
                Human papillomavirus type 114
              • 37116  
                Human papillomavirus type 61
              • 334210 
                Human papillomavirus type 62
              • Human papillomavirus type 72 (1)
                • 1484958
                  Human papillomavirus type 72b
              • 333771 
                Human papillomavirus type 81
              • 333772 
                Human papillomavirus type 83
              • 150546 
                Human papillomavirus type 84
              • 171370 
                Human papillomavirus type 86
              • 120381 
                Human papillomavirus type 87
            • 337043 
              Alphapapillomavirus 4 (8)
              • 333751 
                Human papillomavirus type 2
              • 333752 
                Human papillomavirus type 27 (2)
                • 325568 
                  Human papillomavirus type 27b
              • 10584  
                Human papillomavirus type 2a
              • 333753 
                Human papillomavirus type 57 (3)
                • 186160 
                  Human papillomavirus type 57b
                • 471358 
                  Human papillomavirus type 57c
            • Alphapapillomavirus 5 (4)
              • 333762 
                Human papillomavirus type 26
              • 10595  
                Human papillomavirus type 51
              • 37121  
                Human papillomavirus type 69
              • 129724 
                Human papillomavirus type 82
            • Alphapapillomavirus 6 (4)
              • 10611  
                Human papillomavirus type 30
              • 333765 
                Human papillomavirus type 53
              • 10596  
                Human papillomavirus type 56
              • 37119  
                Human papillomavirus type 66
            • 337042 
              Alphapapillomavirus 7 (10)
              • 333761 
                Human papillomavirus type 18
              • 10588  
                Human papillomavirus type 39
              • 10593  
                Human papillomavirus type 45
              • 37115  
                Human papillomavirus type 59
              • 45240  
                Human papillomavirus type 68 (3)
                • 338322 
                  Human papillomavirus type 68a
                • 940838 
                  Human papillomavirus type 68b
              • 39457  
                Human papillomavirus type 70
              • 338324 
                Human papillomavirus type 97
            • Alphapapillomavirus 8 (3)
              • 10615  
                Human papillomavirus type 40
              • 10591  
                Human papillomavirus type 43
              • 10620  
                Human papillomavirus type 7
            • Alphapapillomavirus 9 (7)
              • 333760 
                Human papillomavirus type 16
              • 10585  
                Human papillomavirus type 31
              • 10586  
                Human papillomavirus type 33
              • 10587  
                Human papillomavirus type 35
              • 10618  
                Human papillomavirus type 52
              • 10598  
                Human papillomavirus type 58
              • 37120  
                Human papillomavirus type 67
          • Betapapillomavirus (44)
            • Betapapillomavirus 1 (19)
              • 587350 
                Human papillomavirus 105
              • 1070416
                Human papillomavirus 143
              • 990302 
                Human papillomavirus 152
              • 10608  
                Human papillomavirus 19
              • 333923 
                Human papillomavirus 5
              • 587347 
                Human papillomavirus 98
              • 587348 
                Human papillomavirus 99
              • 927771 
                Human papillomavirus type 118
              • 10604  
                Human papillomavirus type 12
              • 765056 
                Human papillomavirus type 124
              • Human papillomavirus type 14 (1)
                • 31546  
                  Human papillomavirus type 14D
              • 31547  
                Human papillomavirus type 20
              • 31548  
                Human papillomavirus type 21
              • 37956  
                Human papillomavirus type 24
              • 10609  
                Human papillomavirus type 25
              • 37957  
                Human papillomavirus type 36
              • 10594  
                Human papillomavirus type 47
              • 10599  
                Human papillomavirus type 5b
              • 10579  
                Human papillomavirus type 8
            • Betapapillomavirus 2 (20)
              • 587349 
                Human papillomavirus 100
              • 518628 
                Human papillomavirus 104 (2)
                • 563190 
                  Human papillomavirus FA75/KI88-03
              • 427343 
                Human papillomavirus 107
              • 518629 
                Human papillomavirus 110
              • 518630 
                Human papillomavirus 111
              • 587351 
                Human papillomavirus 113
              • 765052 
                Human papillomavirus 120
              • 765054 
                Human papillomavirus 122
              • 1070418
                Human papillomavirus 145
              • 10606  
                Human papillomavirus 15
              • 743812 
                Human papillomavirus 151
              • 1209820
                Human papillomavirus 159
              • 10607  
                Human papillomavirus 17
              • 37954  
                Human papillomavirus 22
              • 37955  
                Human papillomavirus 23
              • 37958  
                Human papillomavirus 37
              • 37959  
                Human papillomavirus 38 (2)
                • 334514 
                  Human papillomavirus type 38b
              • 10621  
                Human papillomavirus 9
            • Betapapillomavirus 3 (2)
              • 696746 
                Human papillomavirus type 115
              • 10616  
                Human papillomavirus type 49
            • Betapapillomavirus 4 (1)
              • 211787 
                Human papillomavirus type 92
            • Betapapillomavirus 5 (2)
              • 743811 
                Human papillomavirus type 150
              • 247269 
                Human papillomavirus type 96
          • Gammapapillomavirus (52)
            • Gammapapillomavirus 1 (3)
              • 1434988
                Human papillomavirus 173
              • 10617  
                Human papillomavirus 4
              • 28312  
                Human papillomavirus 65
            • Gammapapillomavirus 10 (4)
              • 915429 
                Human papillomavirus 121
              • 909329 
                Human papillomavirus 130
              • 909332 
                Human papillomavirus 133
              • 1070415
                Human papillomavirus 142
            • Gammapapillomavirus 11 (6)
            • Gammapapillomavirus 12 (3)
              • 746832 
                Human papillomavirus 127
              • 909331 
                Human papillomavirus 132
              • 942038 
                Human papillomavirus 148
            • Gammapapillomavirus 13 (2)
              • 931209 
                Human papillomavirus type 128
              • 1110710
                Human papillomavirus type 153
            • Gammapapillomavirus 14 (1)
              • 909330 
                Human papillomavirus type 131
            • Gammapapillomavirus 15 (3)
            • Gammapapillomavirus 16 (1)
              • 1070410
                Human papillomavirus type 137
            • Gammapapillomavirus 17 (1)
              • 1070417
                Human papillomavirus type 144
            • Gammapapillomavirus 18 (1)
              • 1248396
                Human papillomavirus type 156
            • Gammapapillomavirus 19 (1)
              • 1315259
                Human papillomavirus type 166
            • Gammapapillomavirus 2 (1)
              • 40538  
                Human papillomavirus type 48
            • Gammapapillomavirus 20 (1)
              • 1315262
                Human papillomavirus type 163
            • Gammapapillomavirus 21 (1)
            • Gammapapillomavirus 22 (1)
            • Gammapapillomavirus 24 (2)
            • Gammapapillomavirus 27 (1)
            • Gammapapillomavirus 3 (1)
              • 40539  
                Human papillomavirus type 50
            • Gammapapillomavirus 4 (1)
              • 40540  
                Human papillomavirus type 60
            • Gammapapillomavirus 5 (1)
              • 337054 
                Human papillomavirus type 88
            • Gammapapillomavirus 6 (3)
              • 915425 
                Human papillomavirus type 101
              • 338323 
                Human papillomavirus type 103
              • 565537 
                Human papillomavirus type 108
            • Gammapapillomavirus 7 (7)
              • 915426 
                Human papillomavirus 109
              • 765055 
                Human papillomavirus 123
              • 909333 
                Human papillomavirus 134
              • 1070411
                Human papillomavirus 138
              • 1070412
                Human papillomavirus 139
              • 909328 
                Human papillomavirus 149
              • 1165934
                Human papillomavirus 155
            • Gammapapillomavirus 8 (3)
              • 915427 
                Human papillomavirus type 112
              • 765051 
                Human papillomavirus type 119
              • 1070420
                Human papillomavirus type 147
            • Gammapapillomavirus 9 (2)
              • 915428 
                Human papillomavirus 116
              • 931210 
                Human papillomavirus type 129
            • unclassified Gammapapillomavirus (1)
          • Mupapillomavirus (3)
            • 334203 
              Mupapillomavirus 1 (2)
              • 10583  
                Human papillomavirus type 1a
            • Mupapillomavirus 2 (1)
              • 28311  
                Human papillomavirus type 63
          • Nupapillomavirus (1)
            • Nupapillomavirus 1 (1)
              • 10589  
                Human papillomavirus type 41
        • unclassified Papillomaviridae (3)
          • Human papillomavirus types (3)
            • 10566  
              Human papillomavirus
            • 1297549
              Human papillomavirus type 78
            • 652810 
              Human papillomavirus type 85
      • Polyomaviridae (21)
        • Alphapolyomavirus (6)
          • 1303334
            Human polyomavirus 12
          • Human polyomavirus 13 (1)
            • 1497391
              New Jersey polyomavirus-2013
          • Human polyomavirus 5 (1)
            • 493803 
              Merkel cell polyomavirus
          • Human polyomavirus 8 (1)
            • 862909 
              Trichodysplasia spinulosa-associated polyomavirus
          • 943908 
            Human polyomavirus 9 (2)
            • 988774 
              Human polyomavirus IPPyV
        • Betapolyomavirus (8)
          • 1891762
            Human polyomavirus 1
          • Human polyomavirus 2 (2)
            • 10632  
              JC polyomavirus (2)
              • JC polyomavirus type 3 (1)
          • 1891764
            Human polyomavirus 3 (4)
            • 423447 
              KI polyomavirus Stockholm 350
            • 423448 
              KI polyomavirus Stockholm 380
            • 423446 
              KI polyomavirus Stockholm 60
          • Human polyomavirus 4 (1)
        • Deltapolyomavirus (5)
          • 1208309
            Human polyomavirus 10 (2)
          • Human polyomavirus 11 (1)
          • 746830 
            Human polyomavirus 6
          • 746831 
            Human polyomavirus 7
        • unclassified Polyomaviridae (2)
      • Poxviridae (15)
        • Chordopoxvirinae (15)
          • Centapoxvirus (1)
            • unclassified Centapoxvirus (1)
          • Molluscipoxvirus (1)
            • Molluscum contagiosum virus (1)
              • 10280  
                Molluscum contagiosum virus subtype 1
          • Orthopoxvirus (9)
            • 10243  
              Cowpox virus
            • Ectromelia virus (1)
            • 10244  
              Monkeypox virus (2)
              • 619591 
                Monkeypox virus Zaire-96-I-16
            • 10245  
              Vaccinia virus (4)
            • 10255  
              Variola virus
          • Parapoxvirus (1)
          • Yatapoxvirus (3)
            • 99000  
              Tanapox virus (2)
              • 132475 
                Yaba-like disease virus
            • 38804  
              Yaba monkey tumor virus
    • ssDNA viruses (91)
      • Anelloviridae (36)
        • Alphatorquevirus (13)
        • Betatorquevirus (12)
          • 687369 
            Torque teno mini virus 1
          • 687370 
            Torque teno mini virus 2
          • 687371 
            Torque teno mini virus 3
          • 687373 
            Torque teno mini virus 5
          • 687374 
            Torque teno mini virus 6
          • 687375 
            Torque teno mini virus 7
          • 687376 
            Torque teno mini virus 8
          • 687377 
            Torque teno mini virus 9
          • unclassified Betatorquevirus (4)
            • 1859149
              Torque teno mini virus 18
            • 1535290
              Torque teno mini virus ALA22
            • 1535291
              Torque teno mini virus ALH8
            • 93678  
              TTV-like mini virus
        • Gammatorquevirus (2)
          • 687379 
            Torque teno midi virus 1
          • 687380 
            Torque teno midi virus 2
        • Gyrovirus (5)
        • unclassified Anelloviridae (4)
          • 943084 
            Micro Torque teno virus
          • Small anellovirus (2)
          • 68887  
            Torque teno virus
      • Circoviridae (18)
        • Circovirus (2)
          • Human associated circovirus 1 (1)
            • 743300 
              Human stool-associated circular virus NG13
          • unclassified Circovirus (1)
            • 1525173
              Human circovirus VS6600022
        • Cyclovirus (13)
          • Human associated cyclovirus 1 (1)
          • 2038728
            Human associated cyclovirus 10
          • Human associated cyclovirus 12 (1)
            • 1755290
              Indian encephalitis associated cyclovirus
          • Human associated cyclovirus 2 (1)
          • Human associated cyclovirus 3 (1)
          • Human associated cyclovirus 4 (2)
          • Human associated cyclovirus 5 (1)
          • Human associated cyclovirus 6 (1)
          • Human associated cyclovirus 7 (1)
          • Human associated cyclovirus 8 (1)
          • Human associated cyclovirus 9 (1)
            • 1345637
              Human cyclovirus VS5700009
          • unclassified Cyclovirus (1)
        • unclassified Circoviridae (3)
      • Genomoviridae (5)
        • Gemycircularvirus (1)
          • unclassified Gemycircularvirus (1)
            • 1862824
              Gemycircularvirus HV-GcV1
        • Gemygorvirus (1)
          • Sewage derived gemygorvirus 1 (1)
            • 1488574
              Human genital-associated circular DNA virus-1
        • Gemykibivirus (2)
          • Human associated gemykibivirus 1 (1)
          • Human associated gemykibivirus 5 (1)
            • 1862825
              Gemycircularvirus HV-GcV2
        • Gemyvongvirus (1)
          • Human associated gemyvongvirus 1 (1)
            • 1707330
              Human plasma-associated gemycircularvirus
      • Parvoviridae (27)
        • Parvovirinae (27)
          • Bocaparvovirus (10)
            • Primate bocaparvovirus 1 (2)
            • Primate bocaparvovirus 2 (3)
              • Human bocavirus 2 (1)
                • 1108927
                  Human bocavirus isolate SH3
              • 1511882
                Human bocavirus 2c PK
              • 1511883
                Human bocavirus 4 NI
            • unclassified Bocaparvovirus (5)
              • Human bocavirus (5)
                • 1108925
                  Human bocavirus isolate SH1
                • 1108926
                  Human bocavirus isolate SH2
                • 394504 
                  Human bocavirus WLL-1
                • 430048 
                  Human bocavirus WLL-2
                • 444473 
                  Human bocavirus WLL-3
          • Dependoparvovirus (6)
            • Adeno-associated dependoparvovirus A (5)
              • Adeno-associated virus - 1 (1)
                • 68558  
                  Adeno-associated virus - 6
              • 10804  
                Adeno-associated virus - 2
              • 46350  
                Adeno-associated virus - 3 (2)
                • 68742  
                  Adeno-associated virus 3B
              • 57579  
                Adeno-associated virus - 4
            • Adeno-associated dependoparvovirus B (1)
              • 82300  
                Adeno-associated virus - 5
          • Erythroparvovirus (2)
            • Primate erythroparvovirus 1 (1)
              • 10798  
                Human parvovirus B19
            • unclassified Erythrovirus (1)
              • 72197  
                Human erythrovirus V9
          • Tetraparvovirus (2)
            • Primate tetraparvovirus 1 (2)
          • unclassified Parvovirinae (7)
      • Smacoviridae (2)
        • unclassified Smacoviridae (2)
      • unclassified ssDNA viruses (3)
        • Circo-like virus-Brazil (2)
          • 1346815
            Circo-like virus-Brazil hs1
          • 1346816
            Circo-like virus-Brazil hs2
        • 1862826
          unidentified circular ssDNA virus
    • dsRNA viruses (10)
      • Picobirnaviridae (1)
        • Picobirnavirus (1)
      • Reoviridae (9)
        • Sedoreovirinae (7)
          • Orbivirus (1)
          • Rotavirus (5)
            • 28875  
              Rotavirus A (2)
              • 10941  
                Human rotavirus A
            • Rotavirus B (1)
              • 10942  
                Human rotavirus B
            • 36427  
              Rotavirus C
            • Rotavirus H (1)
              • 335103 
                Adult diarrheal rotavirus strain J19
          • Seadornavirus (1)
            • Banna virus (1)
              • 649604 
                Banna virus strain JKT-6423
        • Spinareovirinae (2)
          • Coltivirus (1)
            • 46839  
              Colorado tick fever virus
          • Orthoreovirus (1)
            • unclassified Orthoreovirus (1)
              • Pteropine orthoreovirus (1)
    • ssRNA viruses (794)
      • ssRNA negative-strand viruses (119)
        • Arenaviridae (9)
          • Mammarenavirus (9)
            • 2169991
              Argentinian mammarenavirus
            • 2169992
              Brazilian mammarenavirus
            • 2169993
              Cali mammarenavirus
            • 499556 
              Chapare mammarenavirus
            • 45219  
              Guanarito mammarenavirus
            • 11620  
              Lassa mammarenavirus
            • 649188 
              Lujo mammarenavirus
            • 11623  
              Lymphocytic choriomeningitis mammarenavirus
            • 11628  
              Machupo mammarenavirus
        • Bunyavirales (26)
          • Hantaviridae (7)
            • Orthohantavirus (7)
              • 1980471
                Hantaan orthohantavirus
              • 1980486
                Puumala orthohantavirus
              • 1980490
                Seoul orthohantavirus (2)
                • 12557  
                  Seoul virus 80-39
              • 1980491
                Sin Nombre orthohantavirus
              • 1980494
                Tula orthohantavirus
              • unclassified Orthohantavirus (1)
                • unclassified Hantavirus (1)
          • Nairoviridae (3)
            • Orthonairovirus (3)
              • 1980519
                Crimean-Congo hemorrhagic fever orthonairovirus
              • 1980521
                Dugbe orthonairovirus
              • Thiafora orthonairovirus (1)
          • Peribunyaviridae (6)
            • Orthobunyavirus (6)
              • Bunyamwera orthobunyavirus (1)
              • 35310  
                Bwamba orthobunyavirus
              • California encephalitis orthobunyavirus (1)
              • Guaroa orthobunyavirus (1)
              • Madrid orthobunyavirus (1)
              • Oropouche orthobunyavirus (1)
          • Phenuiviridae (10)
            • Phlebovirus (10)
              • Bujaru phlebovirus (1)
              • Candiru phlebovirus (1)
              • Punta Toro phlebovirus (1)
              • Rift Valley fever phlebovirus (1)
                • 11588  
                  Rift Valley fever virus
              • Sandfly fever Naples phlebovirus (2)
                • 206160 
                  Sandfly fever Naples virus
                • 11590  
                  Toscana virus
              • SFTS phlebovirus (1)
              • unclassified Phlebovirus (2)
                • 1216928
                  Heartland virus
                • Sandfly fever Sicilian virus (1)
                  • 688699 
                    Sandfly fever Turkey virus
              • Uukuniemi phlebovirus (1)
        • Deltavirus (1)
          • 12475  
            Hepatitis delta virus
        • Mononegavirales (67)
          • Filoviridae (14)
            • Ebolavirus (8)
              • 565995 
                Bundibugyo ebolavirus
              • 186539 
                Reston ebolavirus (2)
                • 129003 
                  Reston ebolavirus - Reston
              • 186540 
                Sudan ebolavirus (2)
                • 1216927
                  Sudan ebolavirus - Nakisamata
              • 186541 
                Tai Forest ebolavirus
              • 186538 
                Zaire ebolavirus (2)
                • Ebola virus (1)
                  • 128952 
                    Ebola virus - Mayinga, Zaire, 1976
            • Marburgvirus (6)
              • 11269  
                Marburg marburgvirus (6)
                • 378830 
                  Lake Victoria marburgvirus - Angola2005
                • 378831 
                  Lake Victoria marburgvirus - DRC1999
                • 1126254
                  Lake Victoria marburgvirus - Leiden
                • 33727  
                  Marburg virus - Musoke, Kenya, 1980
                • 378809 
                  Ravn virus - Ravn, Kenya, 1987
          • Paramyxoviridae (34)
            • Avulavirus (2)
            • Henipavirus (2)
            • Morbillivirus (16)
              • 11234  
                Measles morbillivirus (16)
                • Measles virus genotypes and isolates (14)
                  • 170525 
                    Measles virus genotype D4
                  • 170528 
                    Measles virus genotype D8
                  • 1056492
                    Measles virus genotype G3
                  • 763792 
                    Measles virus genotype H1
                  • 884096 
                    Measles virus strain MVi/Arizona.USA/11.08/2
                  • 884100 
                    Measles virus strain MVi/California.USA/16.03
                  • 884099 
                    Measles virus strain MVi/California.USA/8.04
                  • 884094 
                    Measles virus strain MVi/Florida.USA/19.09
                  • 884098 
                    Measles virus strain MVi/New Jersey.USA/45.05
                  • 884093 
                    Measles virus strain MVi/New York.USA/26.09/3
                  • 884101 
                    Measles virus strain MVi/Pennsylvania.USA/20.09
                  • 884097 
                    Measles virus strain MVi/Texas.USA/4.07
                  • 884095 
                    Measles virus strain MVi/Virginia.USA/15.09
                  • 1089795
                    Measles virus strain MVi/Washington.USA/18.08/1
                • Measles virus strain Edmonston (1)
                  • 70149  
                    Measles virus strain Edmonston-Zagreb
            • Respirovirus (3)
              • 12730  
                Human respirovirus 1 (2)
                • 188538 
                  Human parainfluenza virus 1 strain Washington/1964
              • 11216  
                Human respirovirus 3
            • Rubulavirus (10)
              • 1979160
                Human rubulavirus 2
              • Human rubulavirus 4 (2)
                • 11224  
                  Human parainfluenza virus 4a
                • 11226  
                  Human parainfluenza virus 4b
              • 1979162
                Mammalian rubulavirus 5
              • Menangle rubulavirus (1)
              • 1979165
                Mumps rubulavirus (4)
                • Mumps virus genotype A (1)
                  • 11168  
                    Mumps virus strain Jeryl Lynn
                • 1384672
                  Mumps virus genotype G
                • Mumps virus genotype N (1)
                  • 301186 
                    Mumps virus strain L-Zagreb
              • Sosuga rubulavirus (1)
            • unclassified Paramyxoviridae (1)
          • Pneumoviridae (5)
            • Metapneumovirus (1)
              • 162145 
                Human metapneumovirus
            • Orthopneumovirus (2)
              • 11250  
                Human orthopneumovirus (2)
                • Human respiratory syncytial virus B (1)
                  • 253182 
                    Human Respiratory syncytial virus 9320
            • unclassified Pneumoviridae (2)
              • 12814  
                Respiratory syncytial virus (2)
                • 1439707
                  Respiratory syncytial virus type A
          • Rhabdoviridae (14)
            • Ledantevirus (1)
              • Le Dantec ledantevirus (1)
            • Lyssavirus (8)
              • 90961  
                Australian bat lyssavirus
              • 38767  
                Duvenhage lyssavirus
              • 57482  
                European bat 1 lyssavirus
              • 57483  
                European bat 2 lyssavirus
              • 38766  
                Lagos bat lyssavirus
              • 12538  
                Mokola lyssavirus
              • 11292  
                Rabies lyssavirus
              • unclassified Lyssavirus (1)
            • Vesiculovirus (5)
              • Chandipura vesiculovirus (1)
              • Indiana vesiculovirus (1)
                • 11277  
                  Vesicular stomatitis Indiana virus
              • Isfahan vesiculovirus (1)
              • 1972568
                Jurona vesiculovirus
              • Maraba vesiculovirus (1)
        • Orthomyxoviridae (16)
          • Alphainfluenzavirus (12)
            • Influenza A virus (12)
              • H1N1 subtype (4)
                • 641501 
                  Influenza A virus (A/California/04/2009(H1N1))
                • 641809 
                  Influenza A virus (A/California/07/2009(H1N1))
                • 211044 
                  Influenza A virus (A/Puerto Rico/8/1934(H1N1)) (2)
                  • 183764 
                    Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
              • H2N2 subtype (1)
                • 488241 
                  Influenza A virus (A/Korea/426/1968(H2N2))
              • H3N2 subtype (4)
                • 335341 
                  Influenza A virus (A/New York/392/2004(H3N2))
                • 370519 
                  Influenza A virus (A/New York/599/1996(H3N2))
                • 370522 
                  Influenza A virus (A/New York/602/1996(H3N2))
                • 370128 
                  Influenza A virus (A/Northern Territory/60/1968(H3N2))
              • H5N1 subtype (1)
                • 93838  
                  Influenza A virus (A/goose/Guangdong/1/1996(H5N1))
              • H7N9 subtype (1)
                • 1332244
                  Influenza A virus (A/Shanghai/02/2013(H7N9))
              • H9N2 subtype (1)
                • 130760 
                  Influenza A virus (A/Hong Kong/1073/99(H9N2))
          • Betainfluenzavirus (2)
            • Influenza B virus (2)
              • 518987 
                Influenza B virus (B/Lee/1940)
              • 98832  
                Influenza B virus (B/Memphis/12/97)
          • Gammainfluenzavirus (1)
            • Influenza C virus (1)
              • 11553  
                Influenza C virus (C/Ann Arbor/1/50)
          • Thogotovirus (1)
            • 11318  
              Dhori thogotovirus
      • ssRNA positive-strand viruses, no DNA stage (675)
        • Astroviridae (23)
          • Mamastrovirus (17)
            • 1239565
              Mamastrovirus 1 (11)
              • 12456  
                Human astrovirus 1 (5)
                • 626160 
                  Human astrovirus 1 Beijing/128/2005/CHN
                • 626164 
                  Human astrovirus 1 Beijing/176/2006/CHN
                • 626180 
                  Human astrovirus 1 Beijing/291/2007/CHN
                • 626181 
                  Human astrovirus 1 Beijing/293/2007/CHN
              • 12701  
                Human astrovirus 2
              • 35300  
                Human astrovirus 4
              • 35741  
                Human astrovirus 5
              • 37130  
                Human astrovirus 6
              • 43358  
                Human astrovirus 8
            • Mamastrovirus 6 (2)
            • Mamastrovirus 9 (2)
            • unclassified Mamastrovirus (2)
              • Burkina Faso astrovirus (1)
              • 682382 
                HMO Astrovirus A
          • unclassified Astroviridae (6)
        • Caliciviridae (314)
          • Norovirus (305)
            • Norwalk virus (305)
              • 94433  
                Camberwell virus
              • 99565  
                Chiba virus
              • 122928 
                Norovirus GI (15)
                • Norovirus genogroup 1 isolates (3)
                  • 1529909
                    Norovirus GI/Hu/JP/2007/GI.P3_GI.3/Shimizu/KK2866
                  • 1529910
                    Norovirus GI/Hu/JP/2007/GI.P8_GI.8/Nagoya/KY531
                  • 1175308
                    Norovirus Hu/GI/10360/2010/VNM
                • Norovirus GI.1 (8)
                  • 1383577
                    Norovirus Hu/GI.1/8CKIIIc/1974/USA
                  • 1184498
                    Norovirus Hu/GI.1/8FIIa/1968/USA
                  • 1383578
                    Norovirus Hu/GI.1/8K/1979/USA
                  • 1383579
                    Norovirus Hu/GI.1/8MC/1978/USA
                  • 1383580
                    Norovirus Hu/GI.1/8McIII/1973/USA
                  • 1383581
                    Norovirus Hu/GI.1/8MoIIIL/1972/USA
                  • 1383582
                    Norovirus Hu/GI.1/8UIIIf/1973/USA
                  • 1383583
                    Norovirus Hu/GI.1/8W/1968/USA
                • Norovirus GI.2 (2)
                  • 1406147
                    Norovirus Hu/GI.2/Jingzhou/2013401/CHN
                  • 658397 
                    Norovirus Hu/GI.2/Leuven/2003/BEL
                • Norovirus GI.6 (1)
                  • 1173217
                    Norovirus Hu/GI.6/Kingston/ACT160D/2010/AU
              • Norovirus GII (210)
                • 82658  
                  Lordsdale virus
                • Norovirus GII isolates (45)
                  • 158465 
                    Human calicivirus Hu/NLV/GII/MD145-12/1987/US
                  • 1529911
                    Norovirus GII/Hu/JP/2000/GII.P12_GII.12/Saitama/KU16
                  • 1529912
                    Norovirus GII/Hu/JP/2001/GII.P12_GII.12/Saitama/T15
                  • 1529913
                    Norovirus GII/Hu/JP/2001/GII.P12_GII.12/Saitama/T18
                  • 1529914
                    Norovirus GII/Hu/JP/2001/GII.P22_GII.5/Saitama/T49
                  • 1529915
                    Norovirus GII/Hu/JP/2002/GII.P12_GII.13/Saitama/T80
                  • 1529916
                    Norovirus GII/Hu/JP/2002/GII.P16_GII.17/Saitama/T87
                  • 1529917
                    Norovirus GII/Hu/JP/2002/GII.P5_GII.5/Saitama/T52
                  • 1529918
                    Norovirus GII/Hu/JP/2007/GII.P15_GII.15/Sapporo/HK299
                  • 1529919
                    Norovirus GII/Hu/JP/2007/GII.P21_GII.21/Kawasaki/YO284
                  • 1529920
                    Norovirus GII/Hu/JP/2007/GII.P7_GII.14/Fukuoka/KK282
                  • 1529921
                    Norovirus GII/Hu/JP/2007/GII.P7_GII.14/Sendai/YG99
                  • 1529922
                    Norovirus GII/Hu/JP/2010/GII.P4_GII.4/Shimada/ASC96
                  • 1529923
                    Norovirus GII/Hu/JP/2010/GII.P7_GII.7/Musashimurayama/TAKAsanKimchi
                  • 1529924
                    Norovirus GII/Hu/JP/2011/GII/Yuzawa/Gira2HS
                  • 1529925
                    Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/1
                  • 1529926
                    Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/2
                  • 1529927
                    Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/3
                  • 1529928
                    Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/5
                  • 1529929
                    Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/105
                  • 1529930
                    Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/106
                  • 1529931
                    Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/108
                  • 1529932
                    Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/109
                  • 1183319
                    Norovirus Hu/GII.g-GII.12/Gunnedah/NSW895P/2010/AU
                  • 1183320
                    Norovirus Hu/GII.g-GII.12/Wahroonga/NSW004P/2009/AU
                  • 1175309
                    Norovirus Hu/GII/10002/2009/VNM
                  • 1175310
                    Norovirus Hu/GII/10003/2009/VNM
                  • 1175311
                    Norovirus Hu/GII/10012/2009/VNM
                  • 1175312
                    Norovirus Hu/GII/10037/2009/VNM
                  • 1291872
                    Norovirus Hu/GII/20469/2010/VNM
                  • 1291873
                    Norovirus Hu/GII/20477/2010/VNM
                  • 1486684
                    Norovirus Hu/GII/BG1C0004/2010/BGD
                  • 1486685
                    Norovirus Hu/GII/BG1C0066/2011/BGD
                  • 1486687
                    Norovirus Hu/GII/BG1C0204/2011/BGD
                  • 1486689
                    Norovirus Hu/GII/BG1C0241-33/2011/BGD
                  • 1486691
                    Norovirus Hu/GII/BG1C0270/2011/BGD
                  • 1486692
                    Norovirus Hu/GII/BG1C0282/2011/BGD
                  • 1486694
                    Norovirus Hu/GII/BG1C0317/2011/BGD
                  • 1486697
                    Norovirus Hu/GII/BG1C0405/2012/BGD
                  • 1336082
                    Norovirus Hu/GII/Seoul1055/KOR/2010
                  • 1336084
                    Norovirus Hu/GII/Seoul1072/KOR/2010
                  • 1336095
                    Norovirus Hu/GII/Seoul1282/KOR/2010
                  • 1336100
                    Norovirus Hu/GII/Seoul1367/KOR/2010
                  • 1336131
                    Norovirus Hu/GII/Seoul1488/KOR/2011
                  • 756495 
                    Norovirus Hu/GII/Shanghai/SH2/2008/CHN
                • Norovirus GII.12 (7)
                  • 1380573
                    Norovirus Hu/GII.12/CGMH38/2010/TW
                  • 1380574
                    Norovirus Hu/GII.12/CGMH39/2010/TW
                  • 1380575
                    Norovirus Hu/GII.12/CGMH40/2010/TW
                  • 1380576
                    Norovirus Hu/GII.12/CGMH41/2010/TW
                  • 1380577
                    Norovirus Hu/GII.12/CGMH42/2010/TW
                  • 1046049
                    Norovirus Hu/GII.12/HS206/2010/USA
                  • 934293 
                    Norovirus Hu/GII.12/HS210/2010/USA
                • Norovirus GII.14 (1)
                  • 748172 
                    Norovirus Hu/GII.14/8610/Saga/2008/JPN
                • 552592 
                  Norovirus GII.17
                • Norovirus GII.2 (1)
                  • 1458701
                    Norovirus Hu/GII.2/HS255/2011/USA
                • Norovirus GII.3 (3)
                  • 863240 
                    Norovirus Hu/GII.3/CBNU1/2006/KOR
                  • 1260941
                    Norovirus Hu/GII.3/HK71/1978/CHN
                  • 1406148
                    Norovirus Hu/GII.3/Jingzhou/2013402/CHN
                • Norovirus GII.4 (147)
                  • 1514999
                    Norovirus GII/Hu/HKG/2013/GII.4/CUHK-NS-141
                  • 707384 
                    Norovirus Hu/GII-4/Aichi1/2007/JP
                  • 707385 
                    Norovirus Hu/GII-4/Aichi1/2008/JP
                  • 707386 
                    Norovirus Hu/GII-4/Aichi2/2007/JP
                  • 707387 
                    Norovirus Hu/GII-4/Aichi2/2008/JP
                  • 546970 
                    Norovirus Hu/GII-4/Aichi3/2006/JP
                  • 707388 
                    Norovirus Hu/GII-4/Aichi3/2007/JP
                  • 546971 
                    Norovirus Hu/GII-4/Aichi4/2006/JP
                  • 546960 
                    Norovirus Hu/GII-4/Akita1/2006/JP
                  • 546961 
                    Norovirus Hu/GII-4/Akita2/2006/JP
                  • 546962 
                    Norovirus Hu/GII-4/Akita4/2006/JP
                  • 546963 
                    Norovirus Hu/GII-4/Akita5/2006/JP
                  • 546956 
                    Norovirus Hu/GII-4/Aomori1/2006/JP
                  • 546957 
                    Norovirus Hu/GII-4/Aomori2/2006/JP
                  • 546958 
                    Norovirus Hu/GII-4/Aomori4/2006/JP
                  • 546959 
                    Norovirus Hu/GII-4/Aomori5/2006/JP
                  • 1184496
                    Norovirus Hu/GII-4/CBNU2/2007/KR
                  • 1195613
                    Norovirus Hu/GII-4/CGMH01/2006/TW
                  • 1195614
                    Norovirus Hu/GII-4/CGMH02/2006/TW
                  • 1195615
                    Norovirus Hu/GII-4/CGMH03/2006/TW
                  • 1195616
                    Norovirus Hu/GII-4/CGMH04/2006/TW
                  • 1195617
                    Norovirus Hu/GII-4/CGMH05/2006/TW
                  • 1195618
                    Norovirus Hu/GII-4/CGMH06/2006/TW
                  • 1195619
                    Norovirus Hu/GII-4/CGMH07/2006/TW
                  • 1195620
                    Norovirus Hu/GII-4/CGMH08/2006/TW
                  • 1195621
                    Norovirus Hu/GII-4/CGMH09/2006/TW
                  • 1195622
                    Norovirus Hu/GII-4/CGMH10/2006/TW
                  • 1195623
                    Norovirus Hu/GII-4/CGMH11/2006/TW
                  • 1195624
                    Norovirus Hu/GII-4/CGMH12/2007/TW
                  • 1195625
                    Norovirus Hu/GII-4/CGMH13/2007/TW
                  • 1195626
                    Norovirus Hu/GII-4/CGMH14/2007/TW
                  • 1195627
                    Norovirus Hu/GII-4/CGMH15/2007/TW
                  • 1195628
                    Norovirus Hu/GII-4/CGMH16/2007/TW
                  • 1195629
                    Norovirus Hu/GII-4/CGMH17/2007/TW
                  • 1195630
                    Norovirus Hu/GII-4/CGMH18/2008/TW
                  • 1195631
                    Norovirus Hu/GII-4/CGMH19/2009/TW
                  • 1195632
                    Norovirus Hu/GII-4/CGMH20/2009/TW
                  • 1195633
                    Norovirus Hu/GII-4/CGMH21/2010/TW
                  • 1195634
                    Norovirus Hu/GII-4/CGMH22/2010/TW
                  • 1195635
                    Norovirus Hu/GII-4/CGMH23/2010/TW
                  • 1195636
                    Norovirus Hu/GII-4/CGMH24/2010/TW
                  • 1195637
                    Norovirus Hu/GII-4/CGMH25/2010/TW
                  • 1195638
                    Norovirus Hu/GII-4/CGMH26/2010/TW
                  • 1195639
                    Norovirus Hu/GII-4/CGMH27/2010/TW
                  • 1195640
                    Norovirus Hu/GII-4/CGMH28/2010/TW
                  • 587432 
                    Norovirus Hu/GII-4/CUK-3/2008/KR
                  • 546977 
                    Norovirus Hu/GII-4/Ehime1/2006/JP
                  • 546978 
                    Norovirus Hu/GII-4/Ehime2/2006/JP
                  • 546979 
                    Norovirus Hu/GII-4/Ehime5/2006/JP
                  • 714567 
                    Norovirus Hu/GII-4/FUMI/2010/JP
                  • 546975 
                    Norovirus Hu/GII-4/Hiroshima1/2006/JP
                  • 546976 
                    Norovirus Hu/GII-4/Hiroshima2/2006/JP
                  • 546951 
                    Norovirus Hu/GII-4/Hokkaido1/2006/JP
                  • 546952 
                    Norovirus Hu/GII-4/Hokkaido2/2006/JP
                  • 546953 
                    Norovirus Hu/GII-4/Hokkaido3/2006/JP
                  • 546954 
                    Norovirus Hu/GII-4/Hokkaido4/2006/JP
                  • 546955 
                    Norovirus Hu/GII-4/Hokkaido5/2006/JP
                  • 546983 
                    Norovirus Hu/GII-4/Kumamoto1/2006/JP
                  • 546984 
                    Norovirus Hu/GII-4/Kumamoto2/2006/JP
                  • 546985 
                    Norovirus Hu/GII-4/Kumamoto3/2006/JP
                  • 546986 
                    Norovirus Hu/GII-4/Kumamoto4/2006/JP
                  • 546987 
                    Norovirus Hu/GII-4/Kumamoto5/2006/JP
                  • 546964 
                    Norovirus Hu/GII-4/Miyagi2/2006/JP
                  • 546965 
                    Norovirus Hu/GII-4/Miyagi4/2006/JP
                  • 546966 
                    Norovirus Hu/GII-4/Miyagi5/2006/JP
                  • 546980 
                    Norovirus Hu/GII-4/Saga1/2006/JP
                  • 546981 
                    Norovirus Hu/GII-4/Saga4/2006/JP
                  • 546982 
                    Norovirus Hu/GII-4/Saga5/2006/JP
                  • 546972 
                    Norovirus Hu/GII-4/Sakai2/2006/JP
                  • 546973 
                    Norovirus Hu/GII-4/Sakai3/2006/JP
                  • 546974 
                    Norovirus Hu/GII-4/Sakai4/2006/JP
                  • 546967 
                    Norovirus Hu/GII-4/Toyama1/2006/JP
                  • 546968 
                    Norovirus Hu/GII-4/Toyama4/2006/JP
                  • 546969 
                    Norovirus Hu/GII-4/Toyama5/2006/JP
                  • 1325533
                    Norovirus Hu/GII.4/20199/2009/VNM
                  • 1195791
                    Norovirus Hu/GII.4/5M/USA/2004
                  • 1241966
                    Norovirus Hu/GII.4/Berowra/NSW767L/2012/AU
                  • 1331832
                    Norovirus Hu/GII.4/C00006631/2011/UK
                  • 1331833
                    Norovirus Hu/GII.4/C00007876/2011/UK
                  • 1331834
                    Norovirus Hu/GII.4/C00007879/2011/UK
                  • 1331835
                    Norovirus Hu/GII.4/C00007880/2011/UK
                  • 1331836
                    Norovirus Hu/GII.4/C00007881/2011/UK
                  • 1331837
                    Norovirus Hu/GII.4/C00007892/2011/UK
                  • 1331838
                    Norovirus Hu/GII.4/C00007893/2011/UK
                  • 1331839
                    Norovirus Hu/GII.4/C00007904/2011/UK
                  • 1331840
                    Norovirus Hu/GII.4/C00007905/2011/UK
                  • 1331841
                    Norovirus Hu/GII.4/C00007915/2010/UK
                  • 1331842
                    Norovirus Hu/GII.4/C00007916/2011/UK
                  • 1331843
                    Norovirus Hu/GII.4/C00007918/2011/UK
                  • 1331844
                    Norovirus Hu/GII.4/C00007927/2010/UK
                  • 1331845
                    Norovirus Hu/GII.4/C00007928/2011/UK
                  • 1331846
                    Norovirus Hu/GII.4/C00007934/2010/UK
                  • 1331847
                    Norovirus Hu/GII.4/C00007941/2011/UK
                  • 1331848
                    Norovirus Hu/GII.4/C00007952/2011/UK
                  • 1241967
                    Norovirus Hu/GII.4/Caringbah/NSW409G/2011/AU
                  • 660656 
                    Norovirus Hu/GII.4/CHDC2094/1974/US
                  • 660657 
                    Norovirus Hu/GII.4/CHDC3967/1988/US
                  • 660658 
                    Norovirus Hu/GII.4/CHDC4108/1987/US
                  • 660659 
                    Norovirus Hu/GII.4/CHDC4871/1977/US
                  • 1184497
                    Norovirus Hu/GII.4/CHDC5191/1974/USA
                  • 1241968
                    Norovirus Hu/GII.4/Doonside/NSW536I/2011/AU
                  • 1566828
                    Norovirus Hu/GII.4/gg-12-08-04/2012/KR
                  • 1379486
                    Norovirus Hu/GII.4/Guangzhou/GZ2010-L88/CHN/2011
                  • 1379487
                    Norovirus Hu/GII.4/Guangzhou/GZ2010-L91/CHN/2011
                  • 1282423
                    Norovirus Hu/GII.4/GZ2010-L26/Guangzhou/CHN/2010
                  • 1282425
                    Norovirus Hu/GII.4/GZ2010-L87/Guangzhou/CHN/2011
                  • 1262401
                    Norovirus Hu/GII.4/Hong Kong/CUHK3630/2012/CHN
                  • 1337425
                    Norovirus Hu/GII.4/Hong Kong/CUHK6080/2012/CHN
                  • 1268361
                    Norovirus Hu/GII.4/HS191/2004/USA
                  • 1458702
                    Norovirus Hu/GII.4/HS288/2012/USA
                  • 1458703
                    Norovirus Hu/GII.4/HS292/2012/USA
                  • 1458704
                    Norovirus Hu/GII.4/HS66/2001/USA
                  • 1241969
                    Norovirus Hu/GII.4/Jannali/NSW774M/2011/AU
                  • 880562 
                    Norovirus Hu/GII.4/JB-15/KOR/2008
                  • 1432852
                    Norovirus Hu/GII.4/Jiangsu1/2011/CHN
                  • 1432853
                    Norovirus Hu/GII.4/Jiangsu2/2012/CHN
                  • 1406149
                    Norovirus Hu/GII.4/Jingzhou/2013403/CHN
                  • 392172 
                    Norovirus Hu/GII.4/MD-2004/2004/US
                  • 1241970
                    Norovirus Hu/GII.4/Miranda/NSW850K/2011/AU
                  • 1133122
                    Norovirus Hu/GII.4/New Orleans/2010/USA
                  • 1383602
                    Norovirus Hu/GII.4/NIHIC1.13/2012/USA
                  • 1406809
                    Norovirus Hu/GII.4/NIHIC1.16/2012/USA
                  • 1406799
                    Norovirus Hu/GII.4/NIHIC11.3/2013/USA
                  • 1383591
                    Norovirus Hu/GII.4/NIHIC13/2011/USA
                  • 1383599
                    Norovirus Hu/GII.4/NIHIC17.1/2012/USA
                  • 1383601
                    Norovirus Hu/GII.4/NIHIC17.5/2012/USA
                  • 1406805
                    Norovirus Hu/GII.4/NIHIC17.6/2012/USA
                  • 1406801
                    Norovirus Hu/GII.4/NIHIC17.8/2013/USA
                  • 1406802
                    Norovirus Hu/GII.4/NIHIC17.9/2013/USA
                  • 1383590
                    Norovirus Hu/GII.4/NIHIC18.1/2012/USA
                  • 1406797
                    Norovirus Hu/GII.4/NIHIC2.2/2010/USA
                  • 1406798
                    Norovirus Hu/GII.4/NIHIC2.3/2010/USA
                  • 1383596
                    Norovirus Hu/GII.4/NIHIC27.1/2012/USA
                  • 1406800
                    Norovirus Hu/GII.4/NIHIC27.2/2012/USA
                  • 1383609
                    Norovirus Hu/GII.4/NIHIC28.4/2012/USA
                  • 1383606
                    Norovirus Hu/GII.4/NIHIC28.5/2012/USA
                  • 1406796
                    Norovirus Hu/GII.4/NIHIC35/2013/USA
                  • 1316726
                    Norovirus Hu/GII.4/Ohio/684/USA
                  • 1221622
                    Norovirus Hu/GII.4/Ohio/7G/2012/USA
                  • 1221623
                    Norovirus Hu/GII.4/Ohio/7I/2012/USA
                  • 1241971
                    Norovirus Hu/GII.4/Randwick/NSW882J/2011/AU
                  • 1241972
                    Norovirus Hu/GII.4/Randwick/NSW938K/2011/AU
                  • 1183312
                    Norovirus Hu/GII.4/Rockdale/NSW006D/2009/AU
                  • 1312076
                    Norovirus Hu/GII.4/Seoul/1071/2010/KOR
                  • 1498296
                    Norovirus Hu/GII.4/SGU-110421/KOR/2011
                  • 1241973
                    Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU
                  • 1241974
                    Norovirus Hu/GII.4/Woonona/NSW3309/2012/AU
                • Norovirus GII.6 (2)
                  • 1282430
                    Norovirus Hu/GII.6/GZ2010-L96/Guangzhou/CHN/2011
                  • 1458705
                    Norovirus Hu/GII.6/HS245/2010/USA
                • Norovirus GII.9 (1)
                  • 1260944
                    Norovirus Hu/GII.6/CHDC4073/1984/USA
                • 52276  
                  Snow Mountain virus
              • 262897 
                Norovirus GIV (3)
                • Norovirus GIV.1 (2)
                  • 1338688
                    Norovirus Hu/GIV.1/CCDC GR1113-59/CHN/2011
                  • 1183318
                    Norovirus Hu/GIV.1/LakeMacquarie/NSW268O/2010/AU
              • Norovirus isolates (74)
                • 258453 
                  Human calicivirus NLV/GII/Langen1061/2002/DE
                • 336619 
                  Norovirus Hu/Chiba/04-1050/2005/JP
                • 290280 
                  Norovirus Hu/GI/Otofuke/1979/JP
                • 1261195
                  Norovirus Hu/Norwalk/10034/2009/VNM
                • 1261196
                  Norovirus Hu/Norwalk/10051/2009/VNM
                • 1261197
                  Norovirus Hu/Norwalk/10054/2009/VNM
                • 1261198
                  Norovirus Hu/Norwalk/10062/2009/VNM
                • 1261199
                  Norovirus Hu/Norwalk/10074/2009/VNM
                • 1261200
                  Norovirus Hu/Norwalk/10075/2009/VNM
                • 1261201
                  Norovirus Hu/Norwalk/10078/2009/VNM
                • 1261202
                  Norovirus Hu/Norwalk/10079/2009/VNM
                • 1261203
                  Norovirus Hu/Norwalk/10110/2009/VNM
                • 1261204
                  Norovirus Hu/Norwalk/10114/2009/VNM
                • 1261205
                  Norovirus Hu/Norwalk/10116/2009/VNM
                • 1261206
                  Norovirus Hu/Norwalk/10129/2009/VNM
                • 1261207
                  Norovirus Hu/Norwalk/10136/2009/VNM
                • 1261208
                  Norovirus Hu/Norwalk/10137/2009/VNM
                • 1261209
                  Norovirus Hu/Norwalk/10145/2009/VNM
                • 1261210
                  Norovirus Hu/Norwalk/10148/2009/VNM
                • 1261211
                  Norovirus Hu/Norwalk/10158/2009/VNM
                • 1261212
                  Norovirus Hu/Norwalk/10160/2009/VNM
                • 1261213
                  Norovirus Hu/Norwalk/10162/2009/VNM
                • 1261214
                  Norovirus Hu/Norwalk/10163/2009/VNM
                • 1261215
                  Norovirus Hu/Norwalk/10169/2009/VNM
                • 1261216
                  Norovirus Hu/Norwalk/10173/2009/VNM
                • 1261217
                  Norovirus Hu/Norwalk/10176/2009/VNM
                • 1261218
                  Norovirus Hu/Norwalk/10177/2009/VNM
                • 1261219
                  Norovirus Hu/Norwalk/10179/2009/VNM
                • 1261220
                  Norovirus Hu/Norwalk/10182/2009/VNM
                • 1261221
                  Norovirus Hu/Norwalk/10183/2009/VNM
                • 1261222
                  Norovirus Hu/Norwalk/10194/2009/VNM
                • 1261223
                  Norovirus Hu/Norwalk/10199/2009/VNM
                • 1261224
                  Norovirus Hu/Norwalk/10203/2009/VNM
                • 1261225
                  Norovirus Hu/Norwalk/10204/2009/VNM
                • 1261226
                  Norovirus Hu/Norwalk/10222/2009/VNM
                • 1261227
                  Norovirus Hu/Norwalk/10223/2009/VNM
                • 1261228
                  Norovirus Hu/Norwalk/10235/2009/VNM
                • 1261229
                  Norovirus Hu/Norwalk/10236/2009/VNM
                • 1261230
                  Norovirus Hu/Norwalk/10238/2009/VNM
                • 1261231
                  Norovirus Hu/Norwalk/10247/2009/VNM
                • 1261232
                  Norovirus Hu/Norwalk/10255/2009/VNM
                • 1261233
                  Norovirus Hu/Norwalk/10285/2010/VNM
                • 1261234
                  Norovirus Hu/Norwalk/10296/2010/VNM
                • 1261235
                  Norovirus Hu/Norwalk/10313/2010/VNM
                • 1261236
                  Norovirus Hu/Norwalk/10325/2010/VNM
                • 1261237
                  Norovirus Hu/Norwalk/10328/2010/VNM
                • 1261238
                  Norovirus Hu/Norwalk/10368/2010/VNM
                • 1261239
                  Norovirus Hu/Norwalk/10378/2010/VNM
                • 1261240
                  Norovirus Hu/Norwalk/10386/2010/VNM
                • 1261241
                  Norovirus Hu/Norwalk/20008/2009/VNM
                • 1261242
                  Norovirus Hu/Norwalk/20010/2009/VNM
                • 1261243
                  Norovirus Hu/Norwalk/20014/2009/VNM
                • 1261244
                  Norovirus Hu/Norwalk/20016/2009/VNM
                • 1261245
                  Norovirus Hu/Norwalk/20019/2009/VNM
                • 1261246
                  Norovirus Hu/Norwalk/20033/2009/VNM
                • 1261247
                  Norovirus Hu/Norwalk/20035/2009/VNM
                • 1261248
                  Norovirus Hu/Norwalk/20044/2009/VNM
                • 1261249
                  Norovirus Hu/Norwalk/20047/2009/VNM
                • 1261250
                  Norovirus Hu/Norwalk/20066/2009/VNM
                • 1261251
                  Norovirus Hu/Norwalk/20067/2009/VNM
                • 1261252
                  Norovirus Hu/Norwalk/20069/2009/VNM
                • 1261253
                  Norovirus Hu/Norwalk/20092/2009/VNM
                • 1261254
                  Norovirus Hu/Norwalk/20093/2009/VNM
                • 1261255
                  Norovirus Hu/Norwalk/20094/2009/VNM
                • 1261256
                  Norovirus Hu/Norwalk/20118/2009/VNM
                • 1261257
                  Norovirus Hu/Norwalk/20122/2009/VNM
                • 1261258
                  Norovirus Hu/Norwalk/20123/2009/VNM
                • 1261259
                  Norovirus Hu/Norwalk/20128/2009/VNM
                • 1261260
                  Norovirus Hu/Norwalk/20135/2009/VNM
                • 1261261
                  Norovirus Hu/Norwalk/20139/2009/VNM
                • 1261262
                  Norovirus Hu/Norwalk/20140/2009/VNM
                • 1261263
                  Norovirus Hu/Norwalk/20142/2009/VNM
                • 756497 
                  Norovirus Hu/Shanghai/SH312/2009/CHN
                • 756496 
                  Norovirus Hu/Shanghai/SH5/2009/CHN
              • 95340  
                Norwalk-like virus
          • Sapovirus (8)
            • Sapporo virus (8)
              • Sapovirus GI (3)
                • Sapovirus GI.2 (1)
                  • 985691 
                    Sapovirus Hu/GI.2/BR-DF01/BRA/2009
                • 1346530
                  Sapovirus Hu/G1/BE-HPI01/DE/2012
                • 758863 
                  Sapovirus Hu/GI/Sapporo/MT-2010/1982
              • Sapovirus GII (2)
              • Sapovirus isolates (3)
                • 334584 
                  Sapovirus Ehime1107/2002/JP
                • 291175 
                  Sapovirus Hu/Dresden/pJG-Sap01/DE
                • 1280920
                  Sapovirus Hu/Nagoya/NGY-1/2012/JPN
          • Vesivirus (1)
            • unclassified Vesivirus (1)
        • Flaviviridae (67)
          • Flavivirus (38)
            • 64303  
              Aroa virus
            • 12637  
              Dengue virus (5)
            • 64307  
              Gadgets Gully virus
            • 59563  
              Ilheus virus
            • 11072  
              Japanese encephalitis virus
            • 64310  
              Kadam virus
            • 44024  
              Kokobera virus (2)
            • 33743  
              Kyasanur Forest disease virus (2)
              • 172148 
                Alkhumra hemorrhagic fever virus
            • 11085  
              Langat virus
            • 11086  
              Louping ill virus
            • 35279  
              Meaban virus
            • 64300  
              Modoc virus
            • 11079  
              Murray Valley encephalitis virus
            • 64292  
              Ntaya virus
            • 12542  
              Omsk hemorrhagic fever virus
            • 11083  
              Powassan virus
            • 64285  
              Rio Bravo virus
            • Royal Farm virus (1)
            • Saboya virus (1)
            • 11080  
              Saint Louis encephalitis virus
            • 40012  
              Saumarez Reef virus
            • 11084  
              Tick-borne encephalitis virus
            • 64286  
              Usutu virus
            • 164416 
              Wesselsbron virus
            • 11082  
              West Nile virus (5)
              • 449280 
                West Nile virus H442
              • 449279 
                West Nile virus SA381/00
              • 449277 
                West Nile virus SA93/01
              • 449278 
                West Nile virus SPU116/89
            • 11089  
              Yellow fever virus (2)
              • Yellow fever virus 17D (1)
                • 617102 
                  Yellow fever virus 17D/Tiantan
            • 64320  
              Zika virus
          • Hepacivirus (27)
            • 11103  
              Hepacivirus C (27)
              • 41856  
                Hepatitis C virus genotype 1 (4)
                • 31646  
                  Hepatitis C virus subtype 1a
                • 31647  
                  Hepatitis C virus subtype 1b
                • 484894 
                  Hepatitis C virus subtype 1g
              • Hepatitis C virus genotype 2 (4)
                • 31649  
                  Hepatitis C virus subtype 2a
                • 31651  
                  Hepatitis C virus subtype 2c
                • 356466 
                  Hepatitis C virus subtype 2k
                • 1094901
                  Hepatitis C virus subtype 2m
              • 356114 
                Hepatitis C virus genotype 3 (4)
                • 356426 
                  Hepatitis C virus subtype 3a
                • 42792  
                  Hepatitis C virus subtype 3g
                • 1094895
                  Hepatitis C virus subtype 3i
              • 33745  
                Hepatitis C virus genotype 4 (9)
                • 31653  
                  Hepatitis C virus subtype 4a
                • 1094899
                  Hepatitis C virus subtype 4g
                • 1094898
                  Hepatitis C virus subtype 4L
                • 1094900
                  Hepatitis C virus subtype 4m
                • 693426 
                  Hepatitis C virus subtype 4n
                • 745709 
                  Hepatitis C virus subtype 4o
                • 693427 
                  Hepatitis C virus subtype 4r
                • 1208062
                  Hepatitis C virus subtype 4v
              • 33746  
                Hepatitis C virus genotype 5
              • 42182  
                Hepatitis C virus genotype 6 (2)
                • Hepatitis C virus subtype 6a (1)
                  • 356391 
                    Hepatitis C virus (isolate 6a33)
              • 1544901
                Hepatitis C virus genotype 7
              • unclassified Hepatitis C virus (1)
                • 1208063
                  Hepatitis C virus subtype 2k/1b
          • Pegivirus (2)
            • Pegivirus C (1)
            • Pegivirus H (1)
        • Hepeviridae (1)
          • Orthohepevirus (1)
            • Orthohepevirus A (1)
              • 12461  
                Hepatitis E virus
        • Nidovirales (17)
          • Coronaviridae (17)
            • Coronavirinae (17)
              • Alphacoronavirus (3)
                • 11137  
                  Human coronavirus 229E
                • 277944 
                  Human coronavirus NL63 (2)
                  • 270642 
                    Human group 1 coronavirus associated with pneumonia
              • Betacoronavirus (13)
                • Betacoronavirus 1 (3)
                  • Bovine coronavirus (2)
                    • 166124 
                      Human enteric coronavirus 4408 (2)
                      • 627439 
                        Human enteric coronavirus strain 4408
                  • 31631  
                    Human coronavirus OC43
                • 290028 
                  Human coronavirus HKU1
                • 1335626
                  Middle East respiratory syndrome-related coronavirus (5)
                  • 1263720
                    Betacoronavirus England 1
                  • 1235996
                    Human betacoronavirus 2c EMC/2012
                  • 1298362
                    Human betacoronavirus 2c England-Qatar/2012
                  • 1306931
                    Human betacoronavirus 2c Jordan-N3/2012
                • 694009 
                  Severe acute respiratory syndrome-related coronavirus (4)
                  • 227859 
                    SARS coronavirus (3)
                    • 388737 
                      SARS coronavirus GDH-BJH01
                    • 627442 
                      SARS coronavirus P2
              • unclassified coronaviruses (1)
                • 694448 
                  unidentified human coronavirus
        • Picornavirales (236)
        • Togaviridae (17)
          • Alphavirus (16)
            • 11020  
              Barmah Forest virus
            • 37124  
              Chikungunya virus (2)
              • 466217 
                Chikungunya virus Wuerzburg 1
            • 11021  
              Eastern equine encephalitis virus
            • Getah virus (1)
            • 59301  
              Mayaro virus
            • 2169701
              Onyong-nyong virus (2)
            • 11029  
              Ross River virus
            • 11033  
              Semliki Forest virus
            • 11034  
              Sindbis virus (4)
              • 31699  
                Ockelbo virus
              • 44419  
                Sindbis-like virus
              • 84272  
                Sindbis-like virus YN87448
            • 11036  
              Venezuelan equine encephalitis virus
            • 11039  
              Western equine encephalitis virus
          • Rubivirus (1)
    • Retro-transcribing viruses (8)
      • Hepadnaviridae (8)
        • Orthohepadnavirus (8)
    • unclassified viruses (2)
9913   
Bos taurus (173 known viruses)
  • Viruses (173)
    • dsDNA viruses, no RNA stage (53)
      • Adenoviridae (8)
        • Atadenovirus (3)
          • 130499 
            Bovine atadenovirus D (2)
            • 70333  
              Bovine adenovirus 4
          • unclassified Atadenovirus (1)
            • Bovine adenovirus E (1)
        • Mastadenovirus (5)
          • 129953 
            Bovine mastadenovirus A
          • 129950 
            Bovine mastadenovirus B (2)
            • 10510  
              Bovine adenovirus 3
          • 114424 
            Ovine mastadenovirus A (2)
      • Herpesvirales (10)
        • Herpesviridae (10)
          • Alphaherpesvirinae (7)
            • Varicellovirus (7)
              • 10320  
                Bovine alphaherpesvirus 1 (6)
                • 79889  
                  Bovine herpesvirus type 1.1
                • Bovine herpesvirus type 1.2 (4)
                  • 1548190
                    Bovine herpesvirus type 1.2 strain B589
                  • 31519  
                    Bovine herpesvirus type 1.2 strain K22
                  • 1548191
                    Bovine herpesvirus type 1.2 strain SM023
                  • 1548192
                    Bovine herpesvirus type 1.2 strain SP1777
              • 35244  
                Bovine alphaherpesvirus 5
          • Gammaherpesvirinae (3)
            • Macavirus (2)
              • 35252  
                Alcelaphine gammaherpesvirus 1
              • 1504288
                Bovine gammaherpesvirus 6
            • Rhadinovirus (1)
              • 10385  
                Bovine gammaherpesvirus 4
      • Papillomaviridae (23)
        • Firstpapillomavirinae (19)
          • Deltapapillomavirus (3)
            • 337052 
              Deltapapillomavirus 4 (3)
              • 1232138
                Bovine papillomavirus type 13
              • 10560  
                Bovine papillomavirus type 2
          • Dyokappapapillomavirus (1)
            • Dyokappapapillomavirus 4 (1)
              • 1887216
                Bos taurus papillomavirus 18
          • Dyoxipapillomavirus (3)
            • Dyoxipapillomavirus 1 (1)
              • 1001533
                Bos taurus papillomavirus 7
            • Dyoxipapillomavirus 2 (2)
              • 1887217
                Bos taurus papillomavirus 19
              • 1887219
                Bos taurus papillomavirus 21
          • Epsilonpapillomavirus (2)
            • 40537  
              Epsilonpapillomavirus 1 (2)
              • 374077 
                Bovine papillomavirus 8
          • Xipapillomavirus (10)
            • 10561  
              Xipapillomavirus 1 (8)
              • 1969700
                Bovine papillomavirus Aks-02
              • 453461 
                Bovine papillomavirus type 10 (2)
                • 508418 
                  Bovine papillomavirus BAA5-Japan
              • 714200 
                Bovine papillomavirus type 11
              • 10562  
                Bovine papillomavirus type 4
              • 10563  
                Bovine papillomavirus type 6
              • 453460 
                Bovine papillomavirus type 9
            • Xipapillomavirus 2 (1)
              • 1070324
                Bos taurus papillomavirus 12
            • Xipapillomavirus 4 (1)
              • 1887215
                Bos taurus papillomavirus 17
        • unclassified Papillomaviridae (4)
          • non-primate mammal papillomaviruses (4)
            • 1887213
              Bos taurus papillomavirus 13
            • 1887214
              Bos taurus papillomavirus 16
            • 1887218
              Bos taurus papillomavirus 20
            • 10571  
              Bovine papillomavirus
      • Polyomaviridae (6)
        • unassigned Polyomaviridae (2)
        • unclassified Polyomaviridae (4)
      • Poxviridae (6)
        • Chordopoxvirinae (6)
          • Capripoxvirus (1)
            • Lumpy skin disease virus (1)
              • 376849 
                Lumpy skin disease virus NI-2490
          • Orthopoxvirus (3)
          • Parapoxvirus (2)
            • 129727 
              Bovine papular stomatitis virus
            • 129726 
              Pseudocowpox virus
    • ssDNA viruses (19)
      • Circoviridae (3)
        • Circovirus (1)
          • Porcine circovirus 2 (1)
            • 85542  
              Bovine circovirus
        • Cyclovirus (1)
          • Bovine associated cyclovirus 1 (1)
            • 942032 
              Cyclovirus PKbeef23/PAK/2009
        • unclassified Circoviridae (1)
      • Genomoviridae (3)
        • Gemycircularvirus (1)
          • Bovine associated gemycircularvirus 1 (1)
            • 1843742
              Faeces associated gemycircularvirus 22
        • Gemykibivirus (1)
          • Bovine associated gemykibivirus 1 (1)
        • Gemykrogvirus (1)
          • Bovine associated gemykrogvirus 1 (1)
      • Parvoviridae (7)
        • Parvovirinae (6)
          • Bocaparvovirus (3)
            • Ungulate bocaparvovirus 1 (2)
              • 10784  
                Bovine parvovirus (2)
            • 1864484
              Ungulate bocaparvovirus 6
          • Copiparvovirus (1)
            • Ungulate copiparvovirus 1 (1)
              • 172296 
                Bovine parvovirus - 2
          • Erythroparvovirus (1)
            • Ungulate erythroparvovirus 1 (1)
          • Protoparvovirus (1)
            • Ungulate protoparvovirus 1 (1)
              • 10796  
                Porcine parvovirus
        • unclassified Parvoviridae (1)
      • Smacoviridae (6)
        • Bovismacovirus (1)
          • Bovine associated bovismacovirus 2 (1)
            • 1843751
              Bovine faeces associated smacovirus 3
        • Cosmacovirus (1)
          • Bovine associated cosmacovirus 1 (1)
            • 1843752
              Bovine faeces associated smacovirus 4
        • Drosmacovirus (1)
          • Bovine associated drosmacovirus 1 (1)
            • 1843753
              Bovine faeces associated smacovirus 5
        • Huchismacovirus (2)
          • Bovine associated huchismacovirus 1 (1)
            • 1843749
              Bovine faeces associated smacovirus 1
          • Bovine associated huchismacovirus 2 (1)
            • 1843754
              Bovine faeces associated smacovirus 6
        • Porprismacovirus (1)
          • Bovine associated porprismacovirus 1 (1)
            • 1843750
              Bovine faeces associated smacovirus 2
    • dsRNA viruses (11)
      • Reoviridae (11)
        • Sedoreovirinae (11)
          • Orbivirus (10)
            • 40051  
              Bluetongue virus
            • Epizootic hemorrhagic disease virus (8)
              • Epizootic hemorrhagic disease virus 1 (1)
                • 449133 
                  Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey)
              • Epizootic hemorrhagic disease virus 2 (2)
                • 449134 
                  Epizootic hemorrhagic disease virus (serotype 2 / strain 439)
                • 449142 
                  Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki)
              • Epizootic hemorrhagic disease virus 5 (1)
                • 449137 
                  Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157)
              • Epizootic hemorrhagic disease virus 6 (2)
                • 449141 
                  Epizootic hemorrhagic disease virus (serotype 6 / strain 318)
                • 449138 
                  Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753)
              • Epizootic hemorrhagic disease virus 7 (1)
                • 449139 
                  Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775)
              • Epizootic hemorrhagic disease virus 8 (1)
                • 449140 
                  Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A)
            • 40059  
              Palyam virus
          • Seadornavirus (1)
            • Banna virus (1)
              • 649604 
                Banna virus strain JKT-6423
    • ssRNA viruses (83)
      • ssRNA negative-strand viruses (23)
        • Bunyavirales (5)
          • Peribunyaviridae (4)
            • Orthobunyavirus (4)
              • Akabane orthobunyavirus (1)
              • 159141 
                Sathuperi orthobunyavirus
              • 159150 
                Shamonda orthobunyavirus
              • Shuni orthobunyavirus (1)
          • Phenuiviridae (1)
            • Phlebovirus (1)
              • Rift Valley fever phlebovirus (1)
                • 11588  
                  Rift Valley fever virus
        • Mononegavirales (18)
          • Bornaviridae (1)
            • Orthobornavirus (1)
              • Mammalian 1 orthobornavirus (1)
          • Paramyxoviridae (3)
            • Morbillivirus (2)
              • 11241  
                Rinderpest morbillivirus (2)
                • 11242  
                  Rinderpest virus (strain Kabete O)
            • Respirovirus (1)
              • 11215  
                Bovine respirovirus 3
          • Pneumoviridae (2)
            • Orthopneumovirus (2)
              • 11246  
                Bovine orthopneumovirus (2)
                • 11247  
                  Bovine respiratory syncytial virus ATCC51908
          • Rhabdoviridae (12)
            • Ephemerovirus (5)
              • Adelaide River ephemerovirus (1)
                • 31612  
                  Adelaide River virus
              • Berrimah ephemerovirus (1)
              • Bovine fever ephemerovirus (1)
                • 11303  
                  Bovine ephemeral fever virus
              • Kimberley ephemerovirus (1)
              • Koolpinyah ephemerovirus (1)
            • Lyssavirus (1)
              • 11292  
                Rabies lyssavirus
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              • Tibrogargan tibrovirus (1)
            • Vesiculovirus (4)
              • Alagoas vesiculovirus (1)
                • 198833 
                  Vesicular stomatitis Alagoas virus
              • Cocal vesiculovirus (1)
              • Indiana vesiculovirus (1)
                • 11277  
                  Vesicular stomatitis Indiana virus
              • New Jersey vesiculovirus (1)
                • 11280  
                  Vesicular stomatitis New Jersey virus
      • ssRNA positive-strand viruses, no DNA stage (60)
        • Astroviridae (6)
          • Mamastrovirus (5)
            • unclassified Mamastrovirus (5)
          • unclassified Astroviridae (1)
        • Caliciviridae (6)
          • Nebovirus (4)
            • Newbury 1 virus (2)
            • unclassified Nebovirus (2)
              • 1812179
                Bovine calicivirus strain Kirklareli
              • 1212483
                Nebovirus Bo/M3641/2011/HUN
          • Norovirus (1)
            • Norwalk virus (1)
          • unclassified Caliciviridae (1)
            • 243550 
              Calicivirus isolate TCG
        • Flaviviridae (12)
          • Flavivirus (2)
            • 11072  
              Japanese encephalitis virus
            • 11086  
              Louping ill virus
          • Hepacivirus (1)
            • unclassified Hepacivirus (1)
          • Pestivirus (9)
            • Pestivirus A (3)
              • 11099  
                Bovine viral diarrhea virus 1
              • Bovine viral diarrhea virus isolates and strains (1)
                • 82470  
                  Bovine viral diarrhea virus strain Oregon C24V
              • 981676 
                Bovine viral diarrhea virus type 1b
            • Pestivirus B (2)
              • 54315  
                Bovine viral diarrhea virus 2 (2)
                • 60869  
                  Bovine viral diarrhea virus 2 C413
            • Pestivirus D (1)
            • Pestivirus H (2)
              • 381707 
                Bovine viral diarrhea virus 3
              • 402584 
                Bovine viral diarrhea virus 3 Th/04_KhonKaen
            • unclassified Pestivirus (1)
              • Pestivirus Giraffe-1 (1)
        • Nidovirales (14)
          • Coronaviridae (14)
            • Coronavirinae (12)
              • Betacoronavirus (12)
                • Betacoronavirus 1 (12)
                  • 11128  
                    Bovine coronavirus (12)
                    • 422220 
                      Bovine coronavirus E-AH187 (2)
                      • 454963 
                        Bovine coronavirus E-AH187-TC
                    • 422217 
                      Bovine coronavirus E-AH65 (2)
                      • 422218 
                        Bovine coronavirus E-AH65-TC
                    • 422216 
                      Bovine coronavirus E-DB2-TC
                    • 422219 
                      Bovine coronavirus R-AH187
                    • 422214 
                      Bovine coronavirus R-AH65 (2)
                      • 422215 
                        Bovine coronavirus R-AH65-TC
                    • 502108 
                      Bovine respiratory coronavirus AH187
                    • 502105 
                      Bovine respiratory coronavirus bovine/US/OH-440-TC/1996
                    • Human enteric coronavirus 4408 (1)
                      • 627439 
                        Human enteric coronavirus strain 4408
            • Torovirinae (2)
              • Bovine nidovirus 1 (1)
              • Torovirus (1)
                • Bovine torovirus (1)
        • Picornavirales (21)
          • Picornaviridae (21)
            • Aphthovirus (11)
              • 693066 
                Bovine rhinitis B virus
              • Foot-and-mouth disease virus (9)
                • 12111  
                  Foot-and-mouth disease virus - type A
                • 110195 
                  Foot-and-mouth disease virus - type Asia 1
                • Foot-and-mouth disease virus - type C (1)
                  • 12121  
                    Foot-and-mouth disease virus C1
                • 12118  
                  Foot-and-mouth disease virus - type O (6)
                  • 461292 
                    Foot-and-mouth disease virus O/UKG/4014/2001
                  • 461293 
                    Foot-and-mouth disease virus O/UKG/4998/2001
                  • 461295 
                    Foot-and-mouth disease virus O/UKG/5470/2001
                  • 461289 
                    Foot-and-mouth disease virus O/UKG/7039/2001
                  • 461290 
                    Foot-and-mouth disease virus O/UKG/9161/2001
              • unclassified Aphthovirus (1)
            • Enterovirus (6)
              • 12064  
                Enterovirus E (3)
                • 106607 
                  Bovine enterovirus strain K2577
                • 106608 
                  Bovine enterovirus strain SL305
              • 1330520
                Enterovirus F (2)
                • 269638 
                  Bovine enterovirus type 2
              • unclassified Enterovirus (1)
            • Hunnivirus (1)
              • Hunnivirus A (1)
            • Kobuvirus (2)
              • Aichivirus D (1)
                • 1659220
                  Kobuvirus cattle/Kagoshima-1-22-KoV/2014/JPN
              • unclassified Kobuvirus (1)
                • 1659219
                  Kobuvirus cattle/Kagoshima-2-24-KoV/2015/JPN
            • unclassified Picornaviridae (1)
        • Togaviridae (1)
          • Alphavirus (1)
            • 11036  
              Venezuelan equine encephalitis virus
    • unclassified viruses (3)
      • 1843764
        Bovine faeces associated circular DNA virus 1
      • 1843765
        Bovine faeces associated circular DNA virus 2
      • 1843772
        Porcine faeces associated circular DNA molecule-1
9823   
Sus scrofa (169 known viruses)
  • Viruses (169)
    • dsDNA viruses, no RNA stage (12)
      • Adenoviridae (3)
        • Mastadenovirus (3)
          • Porcine mastadenovirus A (1)
            • 35265  
              Porcine adenovirus 3
          • 130371 
            Porcine mastadenovirus C (2)
            • 45370  
              Porcine adenovirus 5
      • Asfarviridae (4)
        • Asfivirus (4)
          • 10497  
            African swine fever virus (4)
            • 443876 
              African swine fever virus Benin 97/1
            • 686262 
              African swine fever virus E75
            • 443878 
              African swine fever virus OURT 88/3
      • Herpesvirales (2)
        • Herpesviridae (2)
          • Alphaherpesvirinae (1)
            • Varicellovirus (1)
              • 10345  
                Suid alphaherpesvirus 1
          • Betaherpesvirinae (1)
            • unassigned Betaherpesvirinae (1)
      • Papillomaviridae (1)
        • unclassified Papillomaviridae (1)
          • non-primate mammal papillomaviruses (1)
            • 2025338
              Sus scrofa papillomavirus 2
      • Poxviridae (2)
        • Chordopoxvirinae (2)
          • Orthopoxvirus (1)
            • Vaccinia virus (1)
          • Suipoxvirus (1)
    • ssDNA viruses (59)
      • Anelloviridae (5)
        • Iotatorquevirus (3)
          • 687386 
            Torque teno sus virus 1a
          • 687387 
            Torque teno sus virus 1b
          • unclassified Iotatorquevirus (1)
            • 742012 
              Torque teno sus virus SH0822/2008
        • Kappatorquevirus (2)
      • Circoviridae (27)
        • Circovirus (19)
          • 133704 
            Porcine circovirus 1
          • 85708  
            Porcine circovirus 2 (14)
            • 479166 
              Porcine circovirus 2 P0404c/03
            • 479167 
              Porcine circovirus 2 R0255/209/03
            • 479168 
              Porcine circovirus 2 S0255/210/03
            • 348291 
              Porcine circovirus 2 strain SD3
            • 348292 
              Porcine circovirus 2 strain SD5
            • 348293 
              Porcine circovirus 2 strain SD6
            • 479169 
              Porcine circovirus 2 T0181c/03
            • 479170 
              Porcine circovirus 2 U0168/03
            • 479171 
              Porcine circovirus 2 Z0161b/03
            • 85709  
              Porcine circovirus type 2-B
            • 85543  
              Porcine circovirus type 2-C
            • 86385  
              Porcine circovirus type 2-D
            • 85544  
              Porcine circovirus type 2-E
          • 1868221
            Porcine circovirus 3
          • unclassified Circovirus (3)
            • 46221  
              Porcine circovirus
            • 720569 
              Porcine circovirus type 1/2a
            • 1506546
              Porcine circovirus-like virus P1
        • Cyclovirus (1)
          • Human associated cyclovirus 8 (1)
            • Cyclovirus VN (1)
        • unclassified Circoviridae (7)
          • Po-Circo-like virus (2)
          • 1105385
            Po-Circo-like virus 41
          • 1105386
            Po-Circo-like virus 51
          • 1475062
            Porcine stool-associated circular virus 4
          • 1475063
            Porcine stool-associated circular virus 5
          • 2017724
            Porcine stool-associated circular virus/BEL/15V010
      • Genomoviridae (3)
        • Gemycircularvirus (3)
          • Porcine associated gemycircularvirus 1 (1)
            • 1843739
              Faeces associated gemycircularvirus 19
          • Porcine associated gemycircularvirus 2 (1)
            • 1391031
              Faeces associated gemycircularvirus 2
          • unclassified Gemycircularvirus (1)
            • 2017712
              Porcine feces-associated gemycircularvirus
      • Parvoviridae (14)
        • Parvovirinae (14)
          • Bocaparvovirus (8)
            • unclassified Bocaparvovirus (2)
              • 1165907
                Porcine bocavirus
              • Porcine bocavirus 5 (1)
                • 1131622
                  Porcine bocavirus 5/JS677
            • Ungulate bocaparvovirus 2 (2)
              • Porcine bocavirus 1 (1)
                • 795694 
                  Porcine bocavirus 1 pig/ZJD/China/2006
              • Porcine bocavirus 2 (1)
                • 795695 
                  Porcine bocavirus 2 pig/ZJD/China/2006
            • Ungulate bocaparvovirus 5 (4)
          • Copiparvovirus (1)
            • Ungulate copiparvovirus 2 (1)
          • Protoparvovirus (3)
            • unclassified Protoparvovirus (2)
            • Ungulate protoparvovirus 1 (1)
              • 10796  
                Porcine parvovirus
          • Tetraparvovirus (1)
            • 1511916
              Ungulate tetraparvovirus 3
          • unclassified Parvovirinae (1)
      • Smacoviridae (1)
        • Porprismacovirus (1)
          • Porcine associated porprismacovirus 2 (1)
            • 1328031
              Porcine stool-associated circular virus 2
      • unclassified ssDNA viruses (9)
        • 1249501
          Pig stool associated circular ssDNA virus (2)
          • 1114942
            Pig stool associated circular ssDNA virus GER2011
        • 1537164
          Porcine stool-associated circular virus 1
        • 1328032
          Porcine stool-associated circular virus 3
        • 1537165
          Porcine stool-associated circular virus 6
        • 1537166
          Porcine stool-associated circular virus 7
        • 1537167
          Porcine stool-associated circular virus 8
        • 1537168
          Porcine stool-associated circular virus 9
        • 1488557
          PoSCV Kor J481
    • dsRNA viruses (3)
      • Picobirnaviridae (1)
        • Picobirnavirus (1)
          • unclassified Picobirnavirus (1)
            • 442302 
              Porcine picobirnavirus
      • Reoviridae (2)
        • Sedoreovirinae (2)
          • Orbivirus (1)
          • Seadornavirus (1)
            • Banna virus (1)
              • 649604 
                Banna virus strain JKT-6423
    • ssRNA viruses (89)
      • ssRNA negative-strand viruses (15)
        • Mononegavirales (8)
          • Filoviridae (2)
            • Ebolavirus (2)
              • 186539 
                Reston ebolavirus (2)
                • 129003 
                  Reston ebolavirus - Reston
          • Paramyxoviridae (4)
            • Henipavirus (1)
            • Respirovirus (1)
              • unclassified Respirovirus (1)
                • 505220 
                  Swine parainfluenza virus 3
            • Rubulavirus (2)
              • Menangle rubulavirus (1)
              • 53179  
                Porcine rubulavirus
          • Rhabdoviridae (2)
            • Lyssavirus (1)
              • 11292  
                Rabies lyssavirus
            • Vesiculovirus (1)
              • Indiana vesiculovirus (1)
                • 11277  
                  Vesicular stomatitis Indiana virus
        • Orthomyxoviridae (7)
          • Alphainfluenzavirus (5)
            • Influenza A virus (5)
              • H1N1 subtype (4)
                • 641501 
                  Influenza A virus (A/California/04/2009(H1N1))
                • 211044 
                  Influenza A virus (A/Puerto Rico/8/1934(H1N1))
                • 1086543
                  Influenza A virus (A/swine/Holguin/121/2010(H1N1))
                • 1086544
                  Influenza A virus (A/swine/La Habana/130/2010(H1N1))
              • H5N1 subtype (1)
                • 93838  
                  Influenza A virus (A/goose/Guangdong/1/1996(H5N1))
          • Deltainfluenzavirus (1)
            • Influenza D virus (1)
              • 1173138
                Influenza D virus (D/swine/Oklahoma/1334/2011)
          • Gammainfluenzavirus (1)
            • Influenza C virus (1)
              • 11553  
                Influenza C virus (C/Ann Arbor/1/50)
      • ssRNA positive-strand viruses, no DNA stage (74)
        • Astroviridae (7)
          • Mamastrovirus (6)
            • 1239566
              Mamastrovirus 2
            • 1239567
              Mamastrovirus 3
            • unclassified Mamastrovirus (4)
          • unclassified Astroviridae (1)
        • Caliciviridae (10)
          • Norovirus (1)
            • Norwalk virus (1)
              • Norovirus GII (1)
                • Norovirus GII isolates (1)
                  • 1088689
                    Norovirus pig/GII/Ch6/China/2009
          • Sapovirus (4)
            • Sapporo virus (4)
              • Sapovirus GIII (1)
                • 106333 
                  Porcine enteric sapovirus
              • Sapovirus GVI (1)
                • 1471436
                  Sapovirus pig/GVI/OH-JJ674/2000/US
              • Sapovirus isolates (2)
                • 1401324
                  Sapovirus pig/Gansu/CH430/2012/CHN
                • 638664 
                  Sapovirus pig/sav1/2008/CHN
          • unclassified Caliciviridae (3)
            • St-Valerien swine virus (3)
              • 520974 
                Calicivirus pig/AB104/CAN
              • 520973 
                Calicivirus pig/AB90/CAN
              • 520975 
                Calicivirus pig/F15-10/CAN
          • Vesivirus (2)
            • 35612  
              Vesicular exanthema of swine virus (2)
              • 82664  
                VESV-like calicivirus
        • Flaviviridae (9)
          • Flavivirus (2)
            • 11072  
              Japanese encephalitis virus
            • 11086  
              Louping ill virus
          • Pestivirus (7)
            • Pestivirus C (4)
              • 11096  
                Classical swine fever virus
              • 358769 
                Classical swine fever virus - Alfort/187
              • 358812 
                Classical swine fever virus - C
              • Classical swine fever virus isolates (1)
                • 149596 
                  Classical swine fever virus strain Eystrup
            • Pestivirus F (1)
              • 412969 
                Porcine pestivirus isolate Bungowannah
            • unclassified Pestivirus (2)
              • Atypical porcine pestivirus (1)
                • 1873455
                  Atypical porcine pestivirus 1
              • 2014960
                Linda virus
        • Hepeviridae (1)
          • Orthohepevirus (1)
            • Orthohepevirus A (1)
              • Hepatitis E virus (1)
                • 63421  
                  Swine hepatitis E virus
        • Nidovirales (20)
          • Arteriviridae (3)
            • Porartevirus (1)
              • 1965066
                Porcine reproductive and respiratory syndrome virus 1
            • unclassified Arteriviridae (2)
              • 28344  
                Porcine reproductive and respiratory syndrome virus (2)
          • Coronaviridae (17)
            • Coronavirinae (16)
              • Alphacoronavirus (5)
                • Alphacoronavirus 1 (3)
                  • 1766554
                    Swine enteric coronavirus
                  • 11149  
                    Transmissible gastroenteritis virus (2)
                    • Porcine respiratory coronavirus (1)
                • 28295  
                  Porcine epidemic diarrhea virus (2)
                  • 1525377
                    Porcine epidemic diarrhea virus L00721/GER/2014
              • Betacoronavirus (1)
                • Betacoronavirus 1 (1)
                  • 42005  
                    Porcine hemagglutinating encephalomyelitis virus
              • Deltacoronavirus (10)
                • Coronavirus HKU15 (10)
                  • 1159905
                    Porcine coronavirus HKU15 (10)
                    • 1465644
                      Deltacoronavirus PDCoV/USA/Illinois121/2014
                    • 1477411
                      Deltacoronavirus PDCoV/USA/Illinois133/2014
                    • 1477412
                      Deltacoronavirus PDCoV/USA/Illinois134/2014
                    • 1477413
                      Deltacoronavirus PDCoV/USA/Illinois136/2014
                    • 1477414
                      Deltacoronavirus PDCoV/USA/Ohio137/2014
                    • 1586324
                      Porcine deltacoronavirus
                    • 1476502
                      Porcine deltacoronavirus 8734/USA-IA/2014
                    • 1559519
                      Porcine deltacoronavirus KNU14-04
                    • 1525854
                      Swine deltacoronavirus OhioCVM1/2014
            • Torovirinae (1)
              • Torovirus (1)
        • Nodaviridae (1)
          • Alphanodavirus (1)
        • Picornavirales (25)
          • Picornaviridae (22)
            • Aphthovirus (5)
              • Foot-and-mouth disease virus (5)
                • Foot-and-mouth disease virus - type C (1)
                  • 12121  
                    Foot-and-mouth disease virus C1
                • 12118  
                  Foot-and-mouth disease virus - type O (2)
                  • 290057 
                    Foot-and-mouth disease virus O/ES/2001
                • 12122  
                  Foot-and-mouth disease virus - type SAT 1
                • 35292  
                  Foot-and-mouth disease virus - type SAT 2
            • Cardiovirus (1)
              • Cardiovirus A (1)
                • 12104  
                  Encephalomyocarditis virus
            • Enterovirus (4)
              • Enterovirus B (2)
                • 12075  
                  Swine vesicular disease virus (2)
                  • 12076  
                    Swine vesicular disease virus (STRAIN H/3 '76)
              • 106966 
                Enterovirus G (2)
                • 64141  
                  Porcine enterovirus 9
            • Kobuvirus (4)
              • Aichivirus C (4)
                • 1156769
                  Porcine kobuvirus (3)
                  • 1136133
                    Porcine kobuvirus SH-W-CHN/2010/China
                  • 703582 
                    Porcine kobuvirus swine/K-30-HUN/2008/HUN
                • 569195 
                  Porcine kobuvirus swine/S-1-HUN/2007/Hungary
            • Pasivirus (2)
              • Pasivirus A (2)
            • Sapelovirus (2)
            • Senecavirus (1)
            • Teschovirus (3)
          • unclassified Picornavirales (3)
        • Togaviridae (1)
          • Alphavirus (1)
            • Getah virus (1)
    • unclassified viruses (1)
10090  
Mus musculus (130 known viruses)
  • Viruses (130)
    • dsDNA viruses, no RNA stage (18)
      • Adenoviridae (2)
        • Mastadenovirus (2)
          • 129956 
            Murine mastadenovirus A
          • Murine mastadenovirus B (1)
      • Herpesvirales (3)
        • Herpesviridae (3)
          • Betaherpesvirinae (3)
            • Muromegalovirus (2)
              • 10366  
                Murid betaherpesvirus 1 (2)
                • 69156  
                  Murine cytomegalovirus (strain K181)
            • Roseolovirus (1)
              • unclassified Roseolovirus (1)
      • Papillomaviridae (1)
        • Firstpapillomavirinae (1)
          • Pipapillomavirus (1)
            • Pipapillomavirus 2 (1)
              • 763552 
                Mus musculus papillomavirus type 1
      • Polyomaviridae (3)
        • Alphapolyomavirus (2)
          • Mus musculus polyomavirus 1 (2)
            • 10636  
              Murine polyomavirus strain A2
            • 179241 
              Murine polyomavirus strain BG
        • Betapolyomavirus (1)
          • 1891770
            Mus musculus polyomavirus 2
      • Poxviridae (9)
        • Chordopoxvirinae (7)
          • Centapoxvirus (1)
          • Orthopoxvirus (6)
            • 10243  
              Cowpox virus
            • 12643  
              Ectromelia virus (2)
            • 10244  
              Monkeypox virus (2)
              • 619591 
                Monkeypox virus Zaire-96-I-16
            • Vaccinia virus (1)
              • 502057 
                Vaccinia virus GLV-1h68
        • unclassified Poxviridae (2)
    • ssDNA viruses (9)
      • Circoviridae (1)
        • Cyclovirus (1)
          • unclassified Cyclovirus (1)
      • Parvoviridae (8)
        • Parvovirinae (8)
          • Protoparvovirus (8)
            • Rodent protoparvovirus 1 (8)
              • 10794  
                Minute virus of mice
              • 35340  
                Mouse parvovirus 1 (2)
              • 344971 
                Mouse parvovirus 2
              • 344970 
                Mouse parvovirus 3
              • Mouse parvovirus 4 (2)
              • 576714 
                Mouse parvovirus 5a
    • dsRNA viruses (2)
      • Reoviridae (2)
        • Sedoreovirinae (2)
          • Orbivirus (1)
          • Seadornavirus (1)
    • ssRNA viruses (81)
      • ssRNA negative-strand viruses (12)
        • Arenaviridae (1)
          • Mammarenavirus (1)
            • 11623  
              Lymphocytic choriomeningitis mammarenavirus
        • Mononegavirales (10)
          • Nyamiviridae (1)
            • Nyavirus (1)
          • Paramyxoviridae (2)
            • Respirovirus (1)
              • 11191  
                Murine respirovirus
            • unclassified Paramyxoviridae (1)
          • Pneumoviridae (3)
            • Orthopneumovirus (3)
              • 11263  
                Murine orthopneumovirus (3)
                • 296738 
                  Pneumonia virus of mice 15
                • 270473 
                  Pneumonia virus of mice J3666
          • Rhabdoviridae (4)
            • Curiovirus (1)
              • Curionopolis curiovirus (1)
            • Lyssavirus (1)
              • unclassified Lyssavirus (1)
            • unclassified Rhabdoviridae (1)
            • Vesiculovirus (1)
              • Maraba vesiculovirus (1)
        • Orthomyxoviridae (1)
          • Betainfluenzavirus (1)
            • Influenza B virus (1)
              • 228675 
                Influenza B virus (B/Memphis/12/97-MA)
      • ssRNA positive-strand viruses, no DNA stage (69)
        • Astroviridae (2)
          • unclassified Astroviridae (2)
        • Caliciviridae (33)
          • Norovirus (33)
            • Norwalk virus (33)
              • Norovirus GV (33)
                • Murine norovirus (33)
                  • 223997 
                    Murine norovirus 1
                  • 351048 
                    Murine norovirus 3
                  • Murine norovirus GV (31)
                    • 463718 
                      Murine norovirus GV/CR1/2005/USA
                    • 463724 
                      Murine norovirus GV/CR10/2005/USA
                    • 463725 
                      Murine norovirus GV/CR11/2005/USA
                    • 463726 
                      Murine norovirus GV/CR13/2005/USA
                    • 463727 
                      Murine norovirus GV/CR15/2005/USA
                    • 463728 
                      Murine norovirus GV/CR17/2005/USA
                    • 463729 
                      Murine norovirus GV/CR18/2005/DEU
                    • 463719 
                      Murine norovirus GV/CR3/2005/USA
                    • 463720 
                      Murine norovirus GV/CR4/2005/USA
                    • 463721 
                      Murine norovirus GV/CR5/2005/USA
                    • 463722 
                      Murine norovirus GV/CR6/2005/USA
                    • 463723 
                      Murine norovirus GV/CR7/2005/USA
                    • 1028321
                      Murine norovirus GV/NIH-2409/2005/USA
                    • 1028322
                      Murine norovirus GV/NIH-2410/2005/USA
                    • 1028323
                      Murine norovirus GV/NIH-2411/2005/USA
                    • 1028324
                      Murine norovirus GV/NIH-2747/2005/USA
                    • 1028325
                      Murine norovirus GV/NIH-2750/2005/USA
                    • 1028326
                      Murine norovirus GV/NIH-4421/2005/USA
                    • 1028327
                      Murine norovirus GV/NIH-4428/2005/USA
                    • 1028328
                      Murine norovirus GV/NIH-4431/2005/USA
                    • 1028329
                      Murine norovirus GV/NIH-A114/2006/USA
                    • 1028330
                      Murine norovirus GV/NIH-D220/2007/USA
                    • 463709 
                      Murine norovirus GV/WU11/2005/USA
                    • 463710 
                      Murine norovirus GV/WU12/2005/USA
                    • 463711 
                      Murine norovirus GV/WU20/2005/USA
                    • 463712 
                      Murine norovirus GV/WU21/2005/USA
                    • 463713 
                      Murine norovirus GV/WU22/2005/USA
                    • 463714 
                      Murine norovirus GV/WU23/2005/USA
                    • 463715 
                      Murine norovirus GV/WU24/2005/USA
                    • 463716 
                      Murine norovirus GV/WU25/2005/USA
                    • 463717 
                      Murine norovirus GV/WU26/2005/USA
        • Flaviviridae (8)
          • Flavivirus (8)
            • Kokobera virus (1)
            • 64292  
              Ntaya virus
            • 64284  
              Saboya virus
            • Tembusu virus (1)
            • 11084  
              Tick-borne encephalitis virus
            • 64297  
              Uganda S virus
            • unclassified Flavivirus (1)
            • 64320  
              Zika virus
        • Nidovirales (16)
          • Coronaviridae (16)
            • Coronavirinae (16)
              • Betacoronavirus (16)
                • 694005 
                  Murine coronavirus (16)
                  • 11138  
                    Murine hepatitis virus (15)
                    • 591071 
                      Murine coronavirus inf-MHV-A59
                    • 502106 
                      Murine coronavirus MHV-1
                    • 502104 
                      Murine coronavirus MHV-3
                    • 591068 
                      Murine coronavirus MHV-JHM.IA
                    • 591069 
                      Murine coronavirus RA59/R13
                    • 502107 
                      Murine coronavirus RA59/SJHM
                    • 429331 
                      Murine coronavirus repA59/RJHM
                    • 429330 
                      Murine coronavirus repJHM/RA59
                    • 591070 
                      Murine coronavirus RJHM/A
                    • 430472 
                      Murine coronavirus SA59/RJHM
                    • 76344  
                      Murine hepatitis virus strain 2
                    • 11142  
                      Murine hepatitis virus strain A59
                    • 11144  
                      Murine hepatitis virus strain JHM
                    • 1163669
                      Murine hepatitis virus strain S/3239-17
        • Picornavirales (9)
          • Picornaviridae (9)
            • Cardiovirus (7)
              • Cardiovirus A (2)
                • 12104  
                  Encephalomyocarditis virus (2)
              • Cardiovirus B (5)
                • 12127  
                  Theiler's murine encephalomyeltits virus GDVII
                • 204711 
                  Theilovirus (4)
                  • 434309 
                    Saffold virus
                  • 12124  
                    Theiler's encephalomyelitis virus
                  • 204729 
                    Theiler's-like virus of rats
            • Parechovirus (2)
              • Parechovirus B (1)
              • Parechovirus C (1)
        • Togaviridae (1)
          • Alphavirus (1)
            • Sindbis virus (1)
              • 44419  
                Sindbis-like virus
9031   
Gallus gallus (77 known viruses)
  • Viruses (77)
    • dsDNA viruses, no RNA stage (15)
      • Adenoviridae (6)
        • Atadenovirus (1)
        • Aviadenovirus (5)
          • 190061 
            Fowl aviadenovirus A
          • Fowl aviadenovirus B (1)
          • 190063 
            Fowl aviadenovirus C
          • 190064 
            Fowl aviadenovirus D
          • 190065 
            Fowl aviadenovirus E
      • Herpesvirales (6)
        • Herpesviridae (6)
          • Alphaherpesvirinae (6)
            • Iltovirus (1)
              • 10386  
                Gallid alphaherpesvirus 1
            • Mardivirus (5)
              • 10390  
                Gallid alphaherpesvirus 2 (2)
                • 1123959
                  Gallid herpesvirus 2 strain 814
              • 35250  
                Gallid alphaherpesvirus 3 (2)
                • 36353  
                  Marek's disease virus serotype 2 MDV2
              • 37108  
                Meleagrid alphaherpesvirus 1
      • Polyomaviridae (1)
        • Gammapolyomavirus (1)
          • Aves polyomavirus 1 (1)
            • 133789 
              Budgerigar fledgling disease virus - 1
      • Poxviridae (2)
        • Chordopoxvirinae (2)
          • Avipoxvirus (2)
            • 10261  
              Fowlpox virus
            • unclassified Avipoxvirus (1)
              • 2059380
                Flamingopox virus FGPVKD09
    • ssDNA viruses (16)
      • Anelloviridae (2)
        • Gyrovirus (2)
          • 12618  
            Chicken anemia virus
          • unclassified Gyrovirus (1)
      • Circoviridae (3)
        • Circovirus (1)
          • Pigeon circovirus (1)
            • 942030 
              Circovirus NGchicken38/NGA/2009
        • Cyclovirus (2)
          • Chicken associated cyclovirus 1 (2)
            • 942037 
              Cyclovirus NGchicken15/NGA/2009
            • 942036 
              Cyclovirus NGchicken8/NGA/2009
      • Genomoviridae (4)
        • Gemycircularvirus (4)
          • Chicken associated gemycircularvirus 1 (1)
            • 1843740
              Faeces associated gemycircularvirus 20
          • Chicken associated gemycircularvirus 2 (1)
            • 1843737
              Faeces associated gemycircularvirus 17
          • unclassified Gemycircularvirus (2)
            • 1930298
              Chicken stool-associated gemycircularvirus
            • 1843761
              Sewage associated gemycircularvirus 3
      • Parvoviridae (6)
        • Parvovirinae (6)
          • Aveparvovirus (3)
            • Galliform aveparvovirus 1 (3)
              • 1136878
                Chicken parvovirus
              • 717641 
                Chicken parvovirus ABU-P1
              • 1633569
                Gallus gallus enteric parvovirus
          • Dependoparvovirus (3)
            • Avian dependoparvovirus 1 (3)
              • 341671 
                Avian adeno-associated virus
              • 219704 
                Avian adeno-associated virus ATCC VR-865
              • 281492 
                Avian adeno-associated virus strain DA-1
      • Smacoviridae (1)
        • unclassified Smacoviridae (1)
          • 1932006
            Chicken associated smacovirus
    • dsRNA viruses (5)
      • Birnaviridae (1)
        • Avibirnavirus (1)
          • 10995  
            Infectious bursal disease virus
      • Reoviridae (4)
        • Sedoreovirinae (3)
          • Rotavirus (3)
            • Rotavirus D (1)
              • 884200 
                Rotavirus D chicken/05V0049/DEU/2005
            • Rotavirus F (1)
              • 994994 
                Rotavirus F chicken/03V0568/DEU/2003
            • Rotavirus G (1)
              • 994995 
                Rotavirus G chicken/03V0567/DEU/2003
        • Spinareovirinae (1)
          • Orthoreovirus (1)
            • 38170  
              Avian orthoreovirus
    • ssRNA viruses (31)
      • ssRNA negative-strand viruses (9)
        • Mononegavirales (6)
          • Paramyxoviridae (5)
            • Avulavirus (4)
              • 11176  
                Avian avulavirus 1 (2)
                • 139270 
                  Newcastle disease virus B1
              • 35302  
                Avian avulavirus 2
              • unclassified Avulavirus (1)
                • 204987 
                  Goose paramyxovirus SF02
            • Rubulavirus (1)
              • Mumps rubulavirus (1)
                • Mumps virus genotype N (1)
                  • 301186 
                    Mumps virus strain L-Zagreb
          • Rhabdoviridae (1)
            • unclassified Rhabdoviridae (1)
        • Orthomyxoviridae (3)
          • Alphainfluenzavirus (3)
            • Influenza A virus (3)
              • H1N1 subtype (3)
                • Influenza A virus (A/Puerto Rico/8/1934(H1N1)) (1)
                  • 183764 
                    Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
                • 1086543
                  Influenza A virus (A/swine/Holguin/121/2010(H1N1))
                • 1086544
                  Influenza A virus (A/swine/La Habana/130/2010(H1N1))
      • ssRNA positive-strand viruses, no DNA stage (22)
        • Astroviridae (2)
          • Avastrovirus (2)
            • Avastrovirus 2 (1)
              • 336960 
                Avian nephritis virus 1
            • unclassified Avastrovirus (1)
        • Caliciviridae (1)
          • unclassified Caliciviridae (1)
        • Flaviviridae (1)
          • Flavivirus (1)
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          • Orthohepevirus (1)
        • Nidovirales (3)
          • Coronaviridae (3)
            • Coronavirinae (3)
              • Gammacoronavirus (3)
                • Avian coronavirus (3)
                  • 11120  
                    Infectious bronchitis virus (3)
                    • 658929 
                      Infectious bronchitis virus ITA/90254/2005
                    • 658930 
                      Infectious bronchitis virus NGA/A116E7/2006
        • Picornavirales (14)
          • Picornaviridae (14)
            • Avihepatovirus (1)
              • Avihepatovirus A (1)
            • Avisivirus (3)
              • Avisivirus B (1)
              • Avisivirus C (1)
              • unclassified Avisivirus (1)
            • Gallivirus (2)
              • unclassified Gallivirus (2)
            • Megrivirus (1)
              • unclassified Megrivirus (1)
            • Sicinivirus (2)
              • 1755588
                Sicinivirus A
              • unclassified Sicinivirus (1)
            • Tremovirus (1)
            • unclassified Picornaviridae (4)
    • unclassified viruses (1)
      • 1930302
        Chicken stool-associated circular virus
9534   
Chlorocebus aethiops (59 known viruses)
  • Viruses (59)
    • dsDNA viruses, no RNA stage (17)
      • Adenoviridae (7)
        • Mastadenovirus (7)
          • Simian mastadenovirus A (2)
          • Simian mastadenovirus B (1)
          • Simian mastadenovirus E (1)
          • Simian mastadenovirus F (1)
          • Simian mastadenovirus G (1)
          • unclassified Simian adenoviruses (1)
            • Simian adenovirus B (1)
      • Asfarviridae (1)
        • Asfivirus (1)
          • 10497  
            African swine fever virus
      • Herpesvirales (3)
        • Herpesviridae (3)
          • Alphaherpesvirinae (2)
            • Simplexvirus (1)
              • 10317  
                Cercopithecine alphaherpesvirus 2
            • Varicellovirus (1)
              • 35246  
                Cercopithecine alphaherpesvirus 9
          • Betaherpesvirinae (1)
            • Cytomegalovirus (1)
              • 50292  
                Cercopithecine betaherpesvirus 5
      • Polyomaviridae (1)
        • unclassified Polyomaviridae (1)
          • 12480  
            African green monkey polyomavirus
      • Poxviridae (5)
        • Chordopoxvirinae (4)
          • Orthopoxvirus (3)
            • 160796 
              Skunkpox virus
            • Vaccinia virus (1)
              • 502057 
                Vaccinia virus GLV-1h68
            • 28874  
              Volepox virus
          • Yatapoxvirus (1)
        • unclassified Poxviridae (1)
    • ssDNA viruses (5)
      • Anelloviridae (5)
        • Alphatorquevirus (5)
          • unclassified Alphatorquevirus (5)
            • 1619218
              Simian torque teno virus 30
            • 1619219
              Simian torque teno virus 31
            • 1619220
              Simian torque teno virus 32
            • 1629656
              Simian torque teno virus 33
            • 1629657
              Simian torque teno virus 34
    • ssRNA viruses (34)
      • ssRNA negative-strand viruses (15)
        • Arenaviridae (2)
          • Mammarenavirus (1)
            • 11628  
              Machupo mammarenavirus
          • unclassified Arenaviridae (1)
            • Arenavirus (1)
              • Old world arenaviruses (1)
                • unclassified Old world arenaviruses (1)
                  • 300180 
                    Mopeia Lassa virus reassortant 29
        • Bunyavirales (3)
          • Hantaviridae (1)
            • Orthohantavirus (1)
          • Nairoviridae (1)
            • Orthonairovirus (1)
              • Thiafora orthonairovirus (1)
          • Peribunyaviridae (1)
            • Orthobunyavirus (1)
              • Wolkberg orthobunyavirus (1)
        • Mononegavirales (9)
          • Filoviridae (5)
            • Marburgvirus (5)
              • 11269  
                Marburg marburgvirus (5)
                • 378830 
                  Lake Victoria marburgvirus - Angola2005
                • 448086 
                  Lake Victoria marburgvirus - Ci67
                • 33727  
                  Marburg virus - Musoke, Kenya, 1980
                • 378809 
                  Ravn virus - Ravn, Kenya, 1987
          • Paramyxoviridae (1)
            • Avulavirus (1)
          • Rhabdoviridae (3)
            • Sripuvirus (1)
              • Almpiwar sripuvirus (1)
            • unclassified Rhabdoviridae (1)
            • Vesiculovirus (1)
              • 1972567
                Yug Bogdanovac vesiculovirus
        • Orthomyxoviridae (1)
          • Thogotovirus (1)
            • 11318  
              Dhori thogotovirus
      • ssRNA positive-strand viruses, no DNA stage (19)
        • Caliciviridae (4)
          • Vesivirus (4)
            • unclassified Vesivirus (2)
            • Vesicular exanthema of swine virus (2)
              • 11982  
                San Miguel sea lion virus
              • 82664  
                VESV-like calicivirus
        • Flaviviridae (2)
          • Flavivirus (2)
            • 64303  
              Aroa virus
            • West Nile virus (1)
              • 307044 
                West Nile virus strain 385-99
        • Nidovirales (3)
          • Arteriviridae (2)
            • Simartevirus (1)
              • 38143  
                Simian hemorrhagic fever virus
            • unclassified Arteriviridae (1)
              • Porcine reproductive and respiratory syndrome virus (1)
                • Lelystad virus (1)
          • Coronaviridae (1)
            • Coronavirinae (1)
              • Alphacoronavirus (1)
                • Porcine epidemic diarrhea virus (1)
                  • 1525377
                    Porcine epidemic diarrhea virus L00721/GER/2014
        • Picornavirales (7)
          • Picornaviridae (7)
            • Enterovirus (4)
              • Enterovirus A (2)
              • Enterovirus B (1)
              • 1330521
                Enterovirus J
            • Parechovirus (3)
              • Parechovirus B (3)
                • Ljungan virus (3)
                  • Ljungan virus 1 (2)
                  • Ljungan virus 2 (1)
        • Togaviridae (3)
          • Alphavirus (3)
            • 11020  
              Barmah Forest virus
            • Chikungunya virus (1)
              • 466217 
                Chikungunya virus Wuerzburg 1
            • Sindbis virus (1)
              • 84272  
                Sindbis-like virus YN87448
9615   
Canis lupus familiaris (55 known viruses)
  • Viruses (55)
    • dsDNA viruses, no RNA stage (21)
      • Adenoviridae (3)
        • Mastadenovirus (3)
          • 10537  
            Canine mastadenovirus A (3)
            • 10512  
              Canine adenovirus 1
            • 10514  
              Canine adenovirus 2
      • Herpesvirales (1)
        • Herpesviridae (1)
          • Alphaherpesvirinae (1)
            • Varicellovirus (1)
              • 170325 
                Canid alphaherpesvirus 1
      • Papillomaviridae (15)
        • Firstpapillomavirinae (15)
          • Chipapillomavirus (10)
            • Chipapillomavirus 1 (4)
              • 1091166
                Canis familiaris papillomavirus 11
              • 360397 
                Canis familiaris papillomavirus 3
              • 658422 
                Canis familiaris papillomavirus 5
              • 1087108
                Canis familiaris papillomavirus 9
            • Chipapillomavirus 2 (2)
              • 1619253
                Canis familiaris papillomavirus 16
              • 464980 
                Canis familiaris papillomavirus 4
            • Chipapillomavirus 3 (4)
              • 1087109
                Canis familiaris papillomavirus 10
              • 1236767
                Canis familiaris papillomavirus 14
              • 1272519
                Canis familiaris papillomavirus 15
              • 1081055
                Canis familiaris papillomavirus 8
          • Lambdapapillomavirus (2)
            • 35258  
              Lambdapapillomavirus 2
            • Lambdapapillomavirus 3 (1)
              • 1513269
                Canis familiaris papillomavirus 6
          • Taupapillomavirus (3)
            • Taupapillomavirus 1 (2)
              • 292792 
                Canis familiaris papillomavirus 2 (2)
                • 658423 
                  Canine papillomavirus 7
            • Taupapillomavirus 2 (1)
              • 1226723
                Canis familiaris papillomavirus 13
      • Polyomaviridae (1)
        • Betapolyomavirus (1)
          • unclassified Betapolyomavirus (1)
            • 1980633
              Canis familiaris polyomavirus 1
      • Poxviridae (1)
        • Chordopoxvirinae (1)
          • Orthopoxvirus (1)
    • ssDNA viruses (9)
      • Anelloviridae (1)
        • Thetatorquevirus (1)
          • 687385 
            Torque teno canis virus
      • Circoviridae (1)
        • Circovirus (1)
      • Genomoviridae (1)
        • Gemygorvirus (1)
          • Canine associated gemygorvirus 1 (1)
            • 1843735
              Faeces associated gemycircularvirus 15
      • Parvoviridae (6)
        • Parvovirinae (6)
          • Bocaparvovirus (3)
            • Carnivore bocaparvovirus 1 (1)
            • Carnivore bocaparvovirus 2 (1)
            • unclassified Bocaparvovirus (1)
          • Protoparvovirus (3)
            • Carnivore protoparvovirus 1 (3)
              • Feline panleukopenia virus (3)
                • 10788  
                  Canine parvovirus (3)
                  • Canine parvovirus 2 (2)
    • dsRNA viruses (4)
      • Picobirnaviridae (1)
        • Picobirnavirus (1)
          • unclassified Picobirnavirus (1)
            • 1961162
              Picobirnavirus dog/KNA/2015
      • Reoviridae (3)
        • Sedoreovirinae (3)
          • Orbivirus (2)
            • 40050  
              African horse sickness virus
            • 40065  
              Chenuda virus
          • Rotavirus (1)
    • ssRNA viruses (21)
      • ssRNA negative-strand viruses (9)
        • Mononegavirales (5)
          • Paramyxoviridae (2)
            • Morbillivirus (1)
              • 11232  
                Canine morbillivirus
            • Rubulavirus (1)
          • Pneumoviridae (1)
            • unclassified Pneumoviridae (1)
          • Rhabdoviridae (2)
            • Lyssavirus (2)
        • Orthomyxoviridae (4)
          • Alphainfluenzavirus (3)
            • Influenza A virus (3)
              • H1N1 subtype (3)
                • Influenza A virus (A/Puerto Rico/8/1934(H1N1)) (1)
                  • 183764 
                    Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1))
                • 1086543
                  Influenza A virus (A/swine/Holguin/121/2010(H1N1))
                • 1086544
                  Influenza A virus (A/swine/La Habana/130/2010(H1N1))
          • Betainfluenzavirus (1)
            • Influenza B virus (1)
              • 228675 
                Influenza B virus (B/Memphis/12/97-MA)
      • ssRNA positive-strand viruses, no DNA stage (12)
        • Astroviridae (1)
          • Mamastrovirus (1)
            • unclassified Mamastrovirus (1)
        • Caliciviridae (3)
          • Vesivirus (3)
            • unclassified Vesivirus (3)
        • Flaviviridae (1)
          • Flavivirus (1)
            • 11086  
              Louping ill virus
        • Nidovirales (2)
          • Coronaviridae (2)
            • Coronavirinae (2)
              • Alphacoronavirus (1)
                • Alphacoronavirus 1 (1)
                  • 11153  
                    Canine coronavirus
              • Betacoronavirus (1)
                • Betacoronavirus 1 (1)
                  • 215681 
                    Canine respiratory coronavirus
        • Picornavirales (5)
          • Picornaviridae (4)
            • Dicipivirus (1)
              • Cadicivirus A (1)
            • Kobuvirus (3)
              • Aichivirus A (2)
                • Canine kobuvirus 1 (1)
                  • 1082189
                    Canine kobuvirus US-PC0082
                • 1281440
                  Canine kobuvirus CH-1
              • unclassified Kobuvirus (1)
          • unclassified Picornavirales (1)
9397   
Chiroptera (52 known viruses)
  • Viruses (52)
    • dsDNA viruses, no RNA stage (5)
      • Polyomaviridae (5)
        • Alphapolyomavirus (3)
          • 1891718
            Cardioderma cor polyomavirus 1
          • 1891722
            Eidolon helvum polyomavirus 1
          • Otomops martiensseni polyomavirus 1 (1)
            • 2035999
              Otomops polyomavirus KY157
        • Betapolyomavirus (2)
          • 1891769
            Miniopterus africanus polyomavirus 1
          • 1891773
            Pteronotus davyi polyomavirus 1
    • ssDNA viruses (6)
      • Circoviridae (6)
        • Circovirus (1)
          • Bat associated circovirus 4 (1)
            • 1732201
              Tadarida brasiliensis circovirus 1
        • Cyclovirus (5)
          • Bat associated cyclovirus 1 (1)
          • Bat associated cyclovirus 10 (1)
            • 1572239
              Bat circovirus POA/2012/VI
          • Bat associated cyclovirus 12 (1)
            • 1572237
              Bat circovirus POA/2012/II
          • 2050587
            Bat associated cyclovirus 4
          • Bat associated cyclovirus 5 (1)
            • 942035 
              Cyclovirus bat/USA/2009
    • dsRNA viruses (2)
      • Reoviridae (1)
        • Spinareovirinae (1)
          • Orthoreovirus (1)
            • unclassified Orthoreovirus (1)
              • Pteropine orthoreovirus (1)
      • Totiviridae (1)
        • unclassified Totiviridae (1)
    • ssRNA viruses (38)
      • ssRNA negative-strand viruses (1)
        • Mononegavirales (1)
          • Rhabdoviridae (1)
            • Lyssavirus (1)
              • 11292  
                Rabies lyssavirus
      • ssRNA positive-strand viruses, no DNA stage (37)
        • Astroviridae (2)
          • unclassified Astroviridae (2)
            • Bastrovirus BAS-2 (1)
              • 1906172
                Bastrovirus/VietNam/Bat/16715_78
            • 1906170
              Bastrovirus-like_virus/VietNam/Bat/17819_21
        • Caliciviridae (1)
          • Sapovirus (1)
            • unclassified Sapovirus (1)
        • Flaviviridae (1)
          • Flavivirus (1)
            • 64283  
              Entebbe bat virus
        • Nidovirales (32)
          • Coronaviridae (32)
            • Coronavirinae (32)
              • Alphacoronavirus (3)
                • Bat coronavirus HKU10 (2)
                  • 1241932
                    Hipposideros bat coronavirus HKU10
                  • 1241933
                    Rousettus bat coronavirus HKU10
                • unclassified Alphacoronavirus (1)
                  • Bat coronavirus 1A (1)
              • Betacoronavirus (29)
                • 694008 
                  Pipistrellus bat coronavirus HKU5 (5)
                  • 424363 
                    Bat coronavirus HKU5-1
                  • 424364 
                    Bat coronavirus HKU5-2
                  • 424365 
                    Bat coronavirus HKU5-3
                  • 424366 
                    Bat coronavirus HKU5-5
                • 694006 
                  Rousettus bat coronavirus HKU9 (9)
                  • 424367 
                    Bat coronavirus HKU9-1
                  • 875612 
                    Bat coronavirus HKU9-10-1
                  • 875613 
                    Bat coronavirus HKU9-10-2
                  • 424368 
                    Bat coronavirus HKU9-2
                  • 424369 
                    Bat coronavirus HKU9-3
                  • 424370 
                    Bat coronavirus HKU9-4
                  • 875614 
                    Bat coronavirus HKU9-5-1
                  • 875615 
                    Bat coronavirus HKU9-5-2
                • Severe acute respiratory syndrome-related coronavirus (10)
                  • SARS coronavirus (10)
                    • Bat SARS coronavirus HKU3 (10)
                      • 741997 
                        Bat SARS coronavirus HKU3-10
                      • 741998 
                        Bat SARS coronavirus HKU3-11
                      • 741999 
                        Bat SARS coronavirus HKU3-12
                      • 742000 
                        Bat SARS coronavirus HKU3-13
                      • 742001 
                        Bat SARS coronavirus HKU3-4
                      • 742002 
                        Bat SARS coronavirus HKU3-5
                      • 742003 
                        Bat SARS coronavirus HKU3-6
                      • 742004 
                        Bat SARS coronavirus HKU3-7
                      • 742005 
                        Bat SARS coronavirus HKU3-8
                      • 742006 
                        Bat SARS coronavirus HKU3-9
                • 694007 
                  Tylonycteris bat coronavirus HKU4 (5)
                  • 424359 
                    Bat coronavirus HKU4-1
                  • 424360 
                    Bat coronavirus HKU4-2
                  • 424361 
                    Bat coronavirus HKU4-3
                  • 424362 
                    Bat coronavirus HKU4-4
        • Tymovirales (1)
          • unclassified Tymovirales (1)
    • unclassified viruses (1)
10088  
Mus (50 known viruses)
  • Viruses (50)
    • dsDNA viruses, no RNA stage (2)
      • Polyomaviridae (1)
        • Alphapolyomavirus (1)
          • Mus musculus polyomavirus 1 (1)
            • 179241 
              Murine polyomavirus strain BG
      • Poxviridae (1)
        • Chordopoxvirinae (1)
          • Orthopoxvirus (1)
            • Ectromelia virus (1)
    • ssDNA viruses (8)
      • Circoviridae (1)
        • Cyclovirus (1)
          • unclassified Cyclovirus (1)
      • Parvoviridae (7)
        • Parvovirinae (7)
          • Protoparvovirus (7)
            • Rodent protoparvovirus 1 (7)
              • 35340  
                Mouse parvovirus 1 (2)
              • 344971 
                Mouse parvovirus 2
              • 344970 
                Mouse parvovirus 3
              • Mouse parvovirus 4 (2)
              • 576714 
                Mouse parvovirus 5a
    • ssRNA viruses (39)
      • ssRNA negative-strand viruses (2)
        • Bunyavirales (2)
          • Nairoviridae (1)
            • Orthonairovirus (1)
              • Thiafora orthonairovirus (1)
          • Phenuiviridae (1)
            • Phlebovirus (1)
              • unclassified Phlebovirus (1)
      • ssRNA positive-strand viruses, no DNA stage (37)
        • Caliciviridae (32)
          • Norovirus (32)
            • Norwalk virus (32)
              • Norovirus GV (32)
                • Murine norovirus (32)
                  • 351048 
                    Murine norovirus 3
                  • Murine norovirus GV (31)
                    • 463718 
                      Murine norovirus GV/CR1/2005/USA
                    • 463724 
                      Murine norovirus GV/CR10/2005/USA
                    • 463725 
                      Murine norovirus GV/CR11/2005/USA
                    • 463726 
                      Murine norovirus GV/CR13/2005/USA
                    • 463727 
                      Murine norovirus GV/CR15/2005/USA
                    • 463728 
                      Murine norovirus GV/CR17/2005/USA
                    • 463729 
                      Murine norovirus GV/CR18/2005/DEU
                    • 463719 
                      Murine norovirus GV/CR3/2005/USA
                    • 463720 
                      Murine norovirus GV/CR4/2005/USA
                    • 463721 
                      Murine norovirus GV/CR5/2005/USA
                    • 463722 
                      Murine norovirus GV/CR6/2005/USA
                    • 463723 
                      Murine norovirus GV/CR7/2005/USA
                    • 1028321
                      Murine norovirus GV/NIH-2409/2005/USA
                    • 1028322
                      Murine norovirus GV/NIH-2410/2005/USA
                    • 1028323
                      Murine norovirus GV/NIH-2411/2005/USA
                    • 1028324
                      Murine norovirus GV/NIH-2747/2005/USA
                    • 1028325
                      Murine norovirus GV/NIH-2750/2005/USA
                    • 1028326
                      Murine norovirus GV/NIH-4421/2005/USA
                    • 1028327
                      Murine norovirus GV/NIH-4428/2005/USA
                    • 1028328
                      Murine norovirus GV/NIH-4431/2005/USA
                    • 1028329
                      Murine norovirus GV/NIH-A114/2006/USA
                    • 1028330
                      Murine norovirus GV/NIH-D220/2007/USA
                    • 463709 
                      Murine norovirus GV/WU11/2005/USA
                    • 463710 
                      Murine norovirus GV/WU12/2005/USA
                    • 463711 
                      Murine norovirus GV/WU20/2005/USA
                    • 463712 
                      Murine norovirus GV/WU21/2005/USA
                    • 463713 
                      Murine norovirus GV/WU22/2005/USA
                    • 463714 
                      Murine norovirus GV/WU23/2005/USA
                    • 463715 
                      Murine norovirus GV/WU24/2005/USA
                    • 463716 
                      Murine norovirus GV/WU25/2005/USA
                    • 463717 
                      Murine norovirus GV/WU26/2005/USA
        • Flaviviridae (2)
          • Flavivirus (2)
            • 11085  
              Langat virus
            • West Nile virus (1)
              • 406269 
                West Nile virus strain PTRoxo
        • Nidovirales (1)
          • Coronaviridae (1)
            • Coronavirinae (1)
              • Betacoronavirus (1)
                • Murine coronavirus (1)
                  • Murine hepatitis virus (1)
                    • 11142  
                      Murine hepatitis virus strain A59
        • Picornavirales (1)
          • Picornaviridae (1)
            • Cardiovirus (1)
              • Cardiovirus A (1)
                • Encephalomyocarditis virus (1)
        • Togaviridae (1)
          • Alphavirus (1)
            • 11020  
              Barmah Forest virus
9544   
Macaca mulatta (49 known viruses)
  • Viruses (49)
    • dsDNA viruses, no RNA stage (24)
      • Adenoviridae (16)
        • Mastadenovirus (16)
          • Human mastadenovirus G (3)
          • Simian mastadenovirus A (2)
          • Simian mastadenovirus H (1)
            • 1560346
              Simian adenovirus DM-2014
          • unclassified Simian adenoviruses (10)
      • Herpesvirales (6)
        • Herpesviridae (6)
          • Alphaherpesvirinae (2)
            • Simplexvirus (2)
              • 10325  
                Macacine alphaherpesvirus 1
              • 340907 
                Papiine alphaherpesvirus 2
          • Betaherpesvirinae (1)
            • Cytomegalovirus (1)
              • 47929  
                Macacine betaherpesvirus 3
          • Gammaherpesvirinae (3)
            • Lymphocryptovirus (1)
              • 45455  
                Macacine gammaherpesvirus 4
            • Rhadinovirus (2)
              • 154334 
                Macacine gammaherpesvirus 5 (2)
                • 83534  
                  Macaca mulatta rhadinovirus 17577
      • Papillomaviridae (2)
        • Firstpapillomavirinae (2)
          • Alphapapillomavirus (2)
            • 10570  
              Alphapapillomavirus 12 (2)
              • 464935 
                Rhesus papillomavirus 1b
    • ssDNA viruses (4)
      • Parvoviridae (4)
        • Parvovirinae (4)
          • Dependoparvovirus (4)
            • Adeno-associated dependoparvovirus A (4)
              • 85106  
                Adeno-associated virus - 1
              • 57579  
                Adeno-associated virus - 4 (3)
                • 202812 
                  Adeno-associated virus - 7
                • 202813 
                  Adeno-associated virus - 8
    • ssRNA viruses (18)
      • ssRNA positive-strand viruses, no DNA stage (18)
        • Flaviviridae (1)
          • Flavivirus (1)
        • Nidovirales (1)
          • Arteriviridae (1)
            • Simartevirus (1)
        • Picornavirales (16)
          • Picornaviridae (16)
            • Enterovirus (14)
              • Enterovirus A (2)
              • Enterovirus B (9)
              • Enterovirus D (1)
              • 1330521
                Enterovirus J
              • Enterovirus L (1)
            • Hepatovirus (1)
              • Hepatovirus A (1)
                • 12101  
                  Simian hepatitis A virus
            • Sapelovirus (1)
              • Sapelovirus B (1)