Chlorocebus aethiops

Scientific NameChlorocebus aethiops [TAX:9534]
Lineagecellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus

Known viruses (193)
Scientific NameAdana virus [TAX:1611877]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus adanaense
RefSeq
Adana virus strain 195 segment L, complete sequence.
Adana virus strain 195 segment M, complete sequence.
Adana virus strain 195 segment S, complete sequence.
Evidence Literature
   Reference PMID: 25653443
      Authors Alkan C, Alwassouf S, Piorkowski G, Bichaud L, Tezcan S, Dincer E, Ergunay K, Ozbel Y, Alten B, de Lamballerie X, Charrel RN
      Title Isolation, genetic characterization, and seroprevalence of Adana virus, a novel phlebovirus belonging to the Salehabad virus complex, in Turkey.
      Journal J Virol. 2015 Apr;89(8):4080-91.
   Comment Culture cell line: VERO cells
Culture cell line: VERO cells
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Scientific NameAfrican green monkey polyomavirus [TAX:12480]
LineageViruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; unclassified Polyomaviridae
RefSeq
African green monkey polyomavirus, complete genome.
Evidence UniProt
Evidence Literature
   Reference PMID: 2998001
      Authors Pawlita M, Clad A, zur Hausen H
      Title Complete DNA sequence of lymphotropic papovavirus: prototype of a new species of the polyomavirus genus.
      Journal Virology. 1985 May;143(1):196-211.
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Scientific NameAfrican green monkey simian foamy virus [TAX:338079]
LineageViruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Spumaretrovirinae; Spumavirus
RefSeq
Simian foamy virus 3, complete genome.
Evidence UniProt
Evidence Literature
   Reference PMID: 1310187
      Authors Renne R, Friedl E, Schweizer M, Fleps U, Turek R, Neumann-Haefelin D
      Title Genomic organization and expression of simian foamy virus type 3 (SFV-3).
      Journal Virology. 1992 Feb;186(2):597-608.
   Comment Culture cell line: BHK-21 cells, Vero cells.
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Scientific NameAfrican swine fever virus [TAX:10497]
LineageViruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Asfuvirales; Asfarviridae; Asfivirus
RefSeq
African swine fever virus strain BA71V, complete genome.
African swine fever virus, complete genome.
Evidence RefSeq
Evidence Literature
   Reference PMID: 26618713
      Authors Rodríguez JM, Moreno LT, Alejo A, Lacasta A, Rodríguez F, Salas ML
      Title Genome Sequence of African Swine Fever Virus BA71, the Virulent Parental Strain of the Nonpathogenic and Tissue-Culture Adapted BA71V.
      Journal PLoS One. 2015;10(11):e0142889.
   Comment Culture cell line: Vero cells
Evidence Literature
   Reference PMID: 11831707
      Authors Yáñez RJ, Rodríguez JM, Nogal ML, Yuste L, Enríquez C, Rodriguez JF, Viñuela E
      Title Analysis of the complete nucleotide sequence of African swine fever virus.
      Journal Virology. 1995 Apr 1;208(1):249-78.
   Comment Culture cell line: Vero cells
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Scientific NameAichi virus 1 [TAX:1313215]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Kodimesavirinae; Kobuvirus; Aichivirus A
RefSeq
Aichi virus, complete genome.
Aichi virus genomic RNA, complete genome.
Evidence Literature
   Reference PMID: 9733894
      Authors Yamashita T, Sakae K, Tsuzuki H, Suzuki Y, Ishikawa N, Takeda N, Miyamura T, Yamazaki S
      Title Complete nucleotide sequence and genetic organization of Aichi virus, a distinct member of the Picornaviridae associated with acute gastroenteritis in humans.
      Journal J Virol. 1998 Oct;72(10):8408-12.
   Comment Culture cell line: BS-C-1 cells, Vero cells.
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Scientific NameAichivirus B [TAX:194965]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Kodimesavirinae; Kobuvirus
RefSeq
Aichivirus B genomic RNA, complete genome, strain:U-1.
Evidence Literature
   Reference PMID: 14573811
      Authors Yamashita T, Ito M, Kabashima Y, Tsuzuki H, Fujiura A, Sakae K
      Title Isolation and characterization of a new species of kobuvirus associated with cattle.
      Journal J Gen Virol. 2003 Nov;84(Pt 11):3069-77.
   Comment Culture cell line: Vero cells, Hela cells
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Scientific NameAkhmeta virus [TAX:2200830]
LineageViruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus
RefSeq
Akhmeta virus isolate Akhmeta_2013-88, complete genome.
Evidence Literature
   Reference PMID: 31554682
      Authors Doty JB, Maghlakelidze G, Sikharulidze I, Tu SL, Morgan CN, Mauldin MR, Parkadze O, Kartskhia N, Turmanidze M, Matheny AM, Davidson W, Tang S, Gao J, Li Y, Upton C, Carroll DS, Emerson GL, Nakazawa Y
      Title Isolation and Characterization of Akhmeta Virus from Wild-Caught Rodents (<i>Apodemus</i> spp.) in Georgia.
      Journal J Virol. 2019 Dec 15;93(24).
   Comment Culture cell line: BSC-40 cells
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Scientific NameAlcube virus [TAX:1725367]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus alcubeense
RefSeq
Alcube virus strain S20 segment S, complete sequence.
Alcube virus strain S20 segment M, complete sequence.
Alcube virus strain S20 segment L, complete sequence.
Evidence Literature
   Reference PMID: 26497645
      Authors Amaro F, Zé-Zé L, Alves MJ, Börstler J, Clos J, Lorenzen S, Becker SC, Schmidt-Chanasit J, Cadar D
      Title Co-circulation of a novel phlebovirus and Massilia virus in sandflies, Portugal.
      Journal Virol J. 2015 Oct 24;12:174.
   Comment Culture cell line: Vero E6 cells
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Scientific NameAlkhumra hemorrhagic fever virus [TAX:172148]
LineageViruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus kyasanurense; Kyasanur Forest disease virus
GenBank
Alkhumra hemorrhagic fever virus strain SCVHF001, complete genome.
DISEASE
H01560  
Alkhumra hemorrhagic fever
Evidence Literature
   Reference PMID: 17370534
      Authors Charrel RN, Fagbo S, Moureau G, Alqahtani MH, Temmam S, de Lamballerie X
      Title Alkhurma hemorrhagic fever virus in Ornithodoros savignyi ticks.
      Journal Emerg Infect Dis. 2007 Jan;13(1):153-5.
   Comment Culture cell line: Vero cells Laboratory host: house mouse, sheep, Wistar rats
Evidence Literature
   Reference PMID: 11554750
      Authors Charrel RN, Zaki AM, Attoui H, Fakeeh M, Billoir F, Yousef AI, de Chesse R, De Micco P, Gould EA, de Lamballerie X
      Title Complete coding sequence of the Alkhurma virus, a tick-borne flavivirus causing severe hemorrhagic fever in humans in Saudi Arabia.
      Journal Biochem Biophys Res Commun. 2001 Sep 21;287(2):455-61.
   Comment Culture cell line: Vero cells Laboratory host: house mouse, sheep, Wistar rats
Evidence Literature
   Reference PMID: 28456648
      Authors Al-Tawfiq JA, Memish ZA
      Title Alkhurma hemorrhagic fever virus.
      Journal Microbes Infect. 2017 Jun;19(6):305-310.
   Comment Culture cell line: Vero cells Laboratory host: house mouse, sheep, Wistar rats
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Scientific NameAlphamesonivirus 2 [TAX:1945560]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Mesnidovirineae; Mesoniviridae; Hexponivirinae; Alphamesonivirus; Karsalivirus
RefSeq
Hana virus strain A4/CI/2004, complete genome.
Evidence Literature
   Reference PMID: 23536661
      Authors Zirkel F, Roth H, Kurth A, Drosten C, Ziebuhr J, Junglen S
      Title Identification and characterization of genetically divergent members of the newly established family Mesoniviridae.
      Journal J Virol. 2013 Jun;87(11):6346-58.
   Comment Culture cell line:C6/36, VeroE6 and VeroFM
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Scientific NameAlston virus [TAX:2495433]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Rubulavirinae; Orthorubulavirus; Orthorubulavirus alstonvillense
RefSeq
Alston virus isolate Alstonville, complete genome.
Evidence Literature
   Reference PMID: 30487438
      Authors Johnson RI, Tachedjian M, Rowe B, Clayton BA, Layton R, Bergfeld J, Wang LF, Marsh GA
      Title Alston Virus, a Novel Paramyxovirus Isolated from Bats Causes Upper Respiratory Tract Infection in Experimentally Challenged Ferrets.
      Journal Viruses. 2018 Nov 28;10(12).
   Comment Culture cell line: MDBK, MDCK, PK15a, HeLa, Paki, and Vero cells
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Scientific NameAmapari virus [TAX:2886894]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus; Mammarenavirus amapariense
RefSeq
Amapari virus segment S, complete sequence.
Amapari virus segment L, complete sequence.
Evidence Literature
   Reference PMID: 12504568
      Authors Archer AM, Rico-Hesse R
      Title High genetic divergence and recombination in Arenaviruses from the Americas.
      Journal Virology. 2002 Dec 20;304(2):274-81.
   Comment Culture cell line: Vero cells Laboratory host: house mouse
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Scientific NameAmbe virus [TAX:1926500]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus ambeense
RefSeq
Ambe virus strain BeAr407981 segment M, complete sequence.
Ambe virus strain BeAr407981 segment L, complete sequence.
Ambe virus strain BeAr407981 segment S, complete sequence.
Evidence Literature
   Reference PMID: 28141497
      Authors Nunes-Neto JP, Souza WM, Acrani GO, Romeiro MF, Fumagalli M, Vieira LC, Medeiros DBA, Lima JA, Lima CPS, Cardoso JF, Figueiredo LTM, Silva SPD, Tesh R, Nunes MRT, Vasconcelos PFDC
      Title Characterization of the Bujaru, frijoles and Tapara antigenic complexes into the sandfly fever group and two unclassified phleboviruses from Brazil.
      Journal J Gen Virol. 2017 Apr;98(4):585-594.
   Comment Culture cell line: Vero cells (CCK81)
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Scientific NameAnaconda paramyxovirus [TAX:1529450]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Ferlavirus; Ferlavirus reptilis
GenBank
Anaconda paramyxovirus isolate RF111111, complete genome.
Evidence Literature
   Reference PMID: 25078906
      Authors Woo PC, Lau SK, Martelli P, Hui SW, Lau CC, Fan RY, Groff JM, Tam EW, Chan KH, Yuen KY
      Title Fatal systemic necrotizing infections associated with a novel paramyxovirus, anaconda paramyxovirus, in green anaconda juveniles.
      Journal J Clin Microbiol. 2014 Oct;52(10):3614-23.
   Comment Culture cell line: BHK21, HF, Calu-3, A549, Hep-2, Caco-2, HRT-18G, Huh-7, Hela, HEK, NT2, RD, SF268, His-1, MDCK, MDBK, RK13, 3T3, Dubca, LLC-MK2, Vero, VeroE6, CRFK, PK-15, RK3E, RMC,DF-1, C6/36 cells
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Scientific NameAnanindeua virus [TAX:1927813]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus ananindeuaense
RefSeq
Ananindeua virus isolate BeAn20525 segment S, complete sequence.
Ananindeua virus isolate BeAn20525 segment M, complete sequence.
Ananindeua virus isolate BeAn20525 segment L, complete sequence.
Evidence Literature
   Reference PMID: 28254992
      Authors Carvalho VL, Nunes MR, Medeiros DB, da Silva SP, Lima CP, Inada DT, Cardoso JF, Vianez JL, Rodrigues SG, Vasconcelos PF
      Title New Virus Genome Sequences of the Guama Serogroup (Genus Orthobunyavirus, Family Bunyaviridae), Isolated in the Brazilian Amazon Region.
      Journal Genome Announc. 2017 Mar 2;5(9).
   Comment Culture cell line:Brain tissues of newborn mice, Vero cells
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Scientific NameAnhanga virus [TAX:904722]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus anhangaense
RefSeq
Anhanga virus strain BeAn46852 segment S, complete sequence.
Anhanga virus strain BeAn46852 segment M, complete sequence.
Evidence Literature
   Reference PMID: 28141497
      Authors Nunes-Neto JP, Souza WM, Acrani GO, Romeiro MF, Fumagalli M, Vieira LC, Medeiros DBA, Lima JA, Lima CPS, Cardoso JF, Figueiredo LTM, Silva SPD, Tesh R, Nunes MRT, Vasconcelos PFDC
      Title Characterization of the Bujaru, frijoles and Tapara antigenic complexes into the sandfly fever group and two unclassified phleboviruses from Brazil.
      Journal J Gen Virol. 2017 Apr;98(4):585-594.
   Comment Culture cell line: Vero cells
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Scientific NameAnhembi virus [TAX:273355]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus anhembiense
RefSeq
Anhembi virus strain SPAr2984 RNA-dependent RNA polymerase gene, complete cds.
Anhembi virus strain SPAr2984 polyprotein gene, complete cds.
Anhembi virus strain SPAr2984 nucleocapsid protein gene, complete cds.
Evidence Literature
   Reference Lopes, O. D. S., Sacchetta, L. D. A., Fonseca, I. E., & Lacerda, J. P. (1975). Bertioga (Guama group) and Anhembi (Bunyamwera group), two new arboviruses isolated in São Paulo, Brazil. The American journal of tropical medicine and hygiene, 24(1), 131-134.
Lopes, O. D. S., Sacchetta, L. D. A., Fonseca, I. E., & Lacerda, J. P. (1975). Bertioga (Guama group) and Anhembi (Bunyamwera group), two new arboviruses isolated in São Paulo, Brazil. The American journal of tropical medicine and hygiene, 24(1), 131-134.
   Comment Culture cell line: Vero (African green monkey kidney cell)
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Scientific NameAntarctic penguin virus A [TAX:2006072]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Orthoavulavirus; Orthoavulavirus borisense; Avian orthoavulavirus 17
RefSeq
Antarctic penguin virus A, complete genome.
Evidence Literature
   Reference PMID: 28628443
      Authors Neira V, Tapia R, Verdugo C, Barriga G, Mor S, Ng TFF, García V, Del Río J, Rodrigues P, Briceño C, Medina RA, González-Acuña D
      Title Novel Avulaviruses in Penguins, Antarctica.
      Journal Emerg Infect Dis. 2017 Jul;23(7):1212-1214.
   Comment Culture cell line: MDBK cells, Vero cells
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Scientific NameAntarctic penguin virus B [TAX:2006073]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Orthoavulavirus; Orthoavulavirus kopaiticense; Avian orthoavulavirus 18
RefSeq
Antarctic penguin virus B, complete genome.
Evidence Literature
   Reference PMID: 28628443
      Authors Neira V, Tapia R, Verdugo C, Barriga G, Mor S, Ng TFF, García V, Del Río J, Rodrigues P, Briceño C, Medina RA, González-Acuña D
      Title Novel Avulaviruses in Penguins, Antarctica.
      Journal Emerg Infect Dis. 2017 Jul;23(7):1212-1214.
   Comment Culture cell line: MDBK cells, Vero cells
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Scientific NameAntarctic penguin virus C [TAX:2006074]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Orthoavulavirus; Orthoavulavirus oneillense; Avian orthoavulavirus 19
RefSeq
Antarctic penguin virus C, complete genome.
Evidence Literature
   Reference PMID: 28628443
      Authors Neira V, Tapia R, Verdugo C, Barriga G, Mor S, Ng TFF, García V, Del Río J, Rodrigues P, Briceño C, Medina RA, González-Acuña D
      Title Novel Avulaviruses in Penguins, Antarctica.
      Journal Emerg Infect Dis. 2017 Jul;23(7):1212-1214.
   Comment Culture cell line: MDBK cells, Vero cells
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Scientific NameApeu virus [TAX:334520]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus apeuense
RefSeq
Apeu virus isolate BeAn848 segment M, complete sequence.
Apeu virus isolate BeAn848 segment L, complete sequence.
Apeu virus isolate BeAn848 segment S, complete sequence.
Evidence Literature
   Reference PMID: 29795585
      Authors Nunes MRT, de Souza WM, Acrani GO, Cardoso JF, da Silva SP, Badra SJ, Figueiredo LTM, Vasconcelos PFDC
      Title Revalidation and genetic characterization of new members of Group C (Orthobunyavirus genus, Peribunyaviridae family) isolated in the Americas.
      Journal PLoS One. 2018;13(5):e0197294.
   Comment Culture Cell Line: VERO cells
Culture Cell Line: VERO cells
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Scientific Nameaquamavirus A1 [TAX:2870389]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Aquamavirus; Aquamavirus A
GenBank
Aquamavirus A1 isolate HO.02.21, complete genome.
Evidence Literature
   Reference PMID: 17942560
      Authors Kapoor A, Victoria J, Simmonds P, Wang C, Shafer RW, Nims R, Nielsen O, Delwart E
      Title A highly divergent picornavirus in a marine mammal.
      Journal J Virol. 2008 Jan;82(1):311-20.
   Comment Culture cell line: Vero cells
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Scientific NameAroa virus [TAX:64303]
LineageViruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus aroaense
RefSeq
Bussuquara virus, complete genome.
Evidence Literature
   Reference PMID: 16223950
      Authors Kuno G, Chang GJ
      Title Biological transmission of arboviruses: reexamination of and new insights into components, mechanisms, and unique traits as well as their evolutionary trends.
      Journal Clin Microbiol Rev. 2005 Oct;18(4):608-37.
   Comment Culture cell line: VERO cells Vector: Culicidae (mosquitos)
Evidence Literature
   Reference PMID: 21419803
      Authors Nunes MR, Palacios G, Nunes KN, Casseb SM, Martins LC, Quaresma JA, Savji N, Lipkin WI, Vasconcelos PF
      Title Evaluation of two molecular methods for the detection of Yellow fever virus genome.
      Journal J Virol Methods. 2011 Jun;174(1-2):29-34.
   Comment Culture cell line: VERO cells Vector: Culicidae (mosquitos)
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Scientific NameArrabida virus [TAX:1457322]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; unclassified Phlebovirus
RefSeq
Arrabida virus strain PoSFPhlebV/126/2008 segment M, complete sequence.
Arrabida virus strain PoSFPhlebV/126/2008 segment S, complete sequence.
Evidence Literature
   Reference PMID: 26795868
      Authors Amaro F, Hanke D, Zé-Zé L, Alves MJ, Becker SC, Höper D
      Title Genetic characterization of Arrabida virus, a novel phlebovirus isolated in South Portugal.
      Journal Virus Res. 2016 Mar 2;214:19-25.
   Comment Culture cell line: Vero E6 (African green monkey kidney cells) Vector: sandfly (tax: 7198)
Culture cell line: Vero E6 (African green monkey kidney cells) Vector: sandfly (tax: 7198)
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Scientific NameAteline alphaherpesvirus 1 [TAX:35243]
LineageViruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Alphaherpesvirinae; Simplexvirus; Simplexvirus atelinealpha1
RefSeq
Ateline alphaherpesvirus 1 isolate Lennette, complete genome.
Evidence Literature
   Reference PMID: 28160144
      Authors Eberle R, Black DH
      Title Sequence of the ateline alphaherpesvirus 1 (HVA1) genome.
      Journal Arch Virol. 2017 May;162(5):1423-1425.
   Comment Culture cell line: Vero cells
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Scientific NameAvian adeno-associated virus ATCC VR-865 [TAX:219704]
LineageViruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Dependoparvovirus; Dependoparvovirus avian1
RefSeq
Avian adeno-associated virus ATCC VR-865, complete genome.
Evidence Literature
   Reference PMID: 12768000
      Authors Bossis I, Chiorini JA
      Title Cloning of an avian adeno-associated virus (AAAV) and generation of recombinant AAAV particles.
      Journal J Virol. 2003 Jun;77(12):6799-810.
   Comment Culture cell line: CEF, DF-1, LMH, QNR, QT6, Chicken primary embryonic kidney cells, Chicken primary pituitary cells, COS cells
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Scientific NameAvian metaavulavirus 2 [TAX:2560313]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Metaavulavirus; Metaavulavirus yucaipaense
RefSeq
Avian paramyxovirus 2 strain APMV-2/Chicken/California/Yucaipa/56, complete genome.
Evidence Literature
   Reference PMID: 18603323
      Authors Subbiah M, Xiao S, Collins PL, Samal SK
      Title Complete sequence of the genome of avian paramyxovirus type 2 (strain Yucaipa) and comparison with other paramyxoviruses.
      Journal Virus Res. 2008 Oct;137(1):40-8.
   Comment Culture cell line: BHK21, BT, DF-1, HEp2, MDCK, PK15, QT35, RK13, Vero cells
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Scientific NameAvian metaavulavirus 5 [TAX:2560315]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Metaavulavirus; Metaavulavirus kunitachiense
RefSeq
Avian paramyxovirus 5 strain budgerigar/Kunitachi/74, complete genome.
Evidence Literature
   Reference PMID: 20174645
      Authors Samuel AS, Paldurai A, Kumar S, Collins PL, Samal SK
      Title Complete genome sequence of avian paramyxovirus (APMV) serotype 5 completes the analysis of nine APMV serotypes and reveals the longest APMV genome.
      Journal PLoS One. 2010 Feb 17;5(2):e9269.
   Comment Culture cell line: Vero cells
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Scientific NameAvian metaavulavirus 7 [TAX:2560317]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Metaavulavirus; Metaavulavirus tennessense
RefSeq
Avian paramyxovirus 7 strain APMV-7/dove/Tennessee/4/75, complete genome.
Evidence Literature
   Reference PMID: 19540277
      Authors Xiao S, Paldurai A, Nayak B, Subbiah M, Collins PL, Samal SK
      Title Complete genome sequence of avian paramyxovirus type 7 (strain Tennessee) and comparison with other paramyxoviruses.
      Journal Virus Res. 2009 Oct;145(1):80-91.
   Comment Culture cell line: Vero cells
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Scientific NameAvian metapneumovirus [TAX:38525]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Pneumoviridae; Metapneumovirus; Metapneumovirus avis
RefSeq
Avian pneumovirus strain LAH A, complete genome.
Evidence Literature
   Reference PMID: 15483235
      Authors Naylor CJ, Brown PA, Edworthy N, Ling R, Jones RC, Savage CE, Easton AJ
      Title Development of a reverse-genetics system for Avian pneumovirus demonstrates that the small hydrophobic (SH) and attachment (G) genes are not essential for virus viability.
      Journal J Gen Virol. 2004 Nov;85(Pt 11):3219-3227.
   Comment Culture cell line: Vero cells
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Scientific NameAvian metapneumovirus type C [TAX:227731]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Pneumoviridae; Metapneumovirus; Metapneumovirus avis; Avian metapneumovirus
GenBank
Avian metapneumovirus type C complete genome, strain Muscovy duck/1999/99178/France.
Evidence Literature
   Reference PMID: 25036224
      Authors Brown PA, Lemaitre E, Briand FX, Courtillon C, Guionie O, Allée C, Toquin D, Bayon-Auboyer MH, Jestin V, Eterradossi N
      Title Molecular comparisons of full length metapneumovirus (MPV) genomes, including newly determined French AMPV-C and -D isolates, further supports possible subclassification within the MPV Genus.
      Journal PLoS One. 2014;9(7):e102740.
   Comment Culture cell line: Vero cells
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Scientific NameAvian metapneumovirus type D [TAX:519376]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Pneumoviridae; Metapneumovirus; Metapneumovirus avis; Avian metapneumovirus
GenBank
Avian metapneumovirus type D complete genome, strain Turkey/1985/Fr85.1.
Evidence Literature
   Reference PMID: 25036224
      Authors Brown PA, Lemaitre E, Briand FX, Courtillon C, Guionie O, Allée C, Toquin D, Bayon-Auboyer MH, Jestin V, Eterradossi N
      Title Molecular comparisons of full length metapneumovirus (MPV) genomes, including newly determined French AMPV-C and -D isolates, further supports possible subclassification within the MPV Genus.
      Journal PLoS One. 2014;9(7):e102740.
   Comment Culture cell line: Vero cells
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Scientific NameAvian orthoavulavirus 9 [TAX:2560326]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Orthoavulavirus; Orthoavulavirus newyorkense
RefSeq
Avian paramyxovirus 9 strain duck/New York/22/1978, complete genome.
Evidence Literature
   Reference PMID: 19185593
      Authors Samuel AS, Kumar S, Madhuri S, Collins PL, Samal SK
      Title Complete sequence of the genome of avian paramyxovirus type 9 and comparison with other paramyxoviruses.
      Journal Virus Res. 2009 Jun;142(1-2):10-8.
   Comment Culture cell line: SPF embryonated chicken eggs, CEK, DF-1, Vero, BHK21 cells
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Scientific NameAvian orthoreovirus [TAX:38170]
LineageViruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Spinareoviridae; Orthoreovirus
RefSeq
Avian orthoreovirus genomic RNA, segment M3, complete sequence, strain: Pycno-1.
Avian orthoreovirus genomic RNA, segment S2, complete sequence, strain: Pycno-1.
Avian orthoreovirus genomic RNA, segment L1, complete sequence, strain: Pycno-1.
Avian orthoreovirus genomic RNA, segment L2, complete sequence, strain: Pycno-1.
Avian orthoreovirus genomic RNA, segment S4, complete sequence, strain: Pycno-1.
Avian orthoreovirus genomic RNA, segment L3, complete sequence, strain: Pycno-1.
Avian orthoreovirus genomic RNA, segment M1, complete sequence, strain: Pycno-1.
Avian orthoreovirus genomic RNA, segment M2, complete sequence, strain: Pycno-1.
Avian orthoreovirus genomic RNA, segment S1, complete sequence, strain: Pycno-1.
Avian orthoreovirus genomic RNA, segment S3, complete sequence, strain: Pycno-1.
Evidence Literature
   Reference PMID: 25740958
      Authors Ogasawara Y, Ueda H, Kikuchi N, Kirisawa R
      Title Isolation and genomic characterization of a novel orthoreovirus from a brown-eared bulbul (Hypsipetes amaurotis) in Japan.
      Journal J Gen Virol. 2015 Jul;96(Pt 7):1777-86.
   Comment Culture Cell Line: Caco-2, Vero cells
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Scientific NameAvian paramyxovirus 14 [TAX:1928005]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Metaavulavirus; Metaavulavirus japanense; Avian metaavulavirus 14
RefSeq
Avian paramyxovirus 14 isolate APMV14/duck/Japan/11OG0352/2011, complete genome.
Evidence Literature
   Reference PMID: 27884627
      Authors Thampaisarn R, Bui VN, Trinh DQ, Nagai M, Mizutani T, Omatsu T, Katayama Y, Gronsang D, Le DHT, Ogawa H, Imai K
      Title Characterization of avian paramyxovirus serotype 14, a novel serotype, isolated from a duck fecal sample in Japan.
      Journal Virus Res. 2017 Jan 15;228:46-57.
   Comment Culture cell line: Vero cells
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Scientific NameAvian paramyxovirus goose/Shimane/67/2000 [TAX:1401445]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Orthoavulavirus; Orthoavulavirus japanense; Avian orthoavulavirus 13
RefSeq
Avian paramyxovirus goose/Shimane/67/2000 viral cRNA, complete genome.
Evidence Literature
   Reference PMID: 25866408
      Authors Yamamoto E, Ito H, Tomioka Y, Ito T
      Title Characterization of novel avian paramyxovirus strain APMV/Shimane67 isolated from migratory wild geese in Japan.
      Journal J Vet Med Sci. 2015 Sep;77(9):1079-85.
   Comment Culture cell line: DF-1, MDCK, MDBK, BHK, Vero, 293 cells
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Scientific NameAvian paramyxovirus penguin/Falkland Islands/324/2007 [TAX:862945]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Avulavirinae; Metaavulavirus; Metaavulavirus falklandense
RefSeq
Avian paramyxovirus penguin/Falkland Islands/324/2007, complete genome.
Evidence Literature
   Reference PMID: 20702635
      Authors Miller PJ, Afonso CL, Spackman E, Scott MA, Pedersen JC, Senne DA, Brown JD, Fuller CM, Uhart MM, Karesh WB, Brown IH, Alexander DJ, Swayne DE
      Title Evidence for a new avian paramyxovirus serotype 10 detected in rockhopper penguins from the Falkland Islands.
      Journal J Virol. 2010 Nov;84(21):11496-504.
   Comment Culture cell line: SPF ECE,vero cells, DF1 cells
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Scientific NameBaakal virus [TAX:2609058]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; unclassified Peribunyaviridae
RefSeq
Baakal virus strain Palenque-C593-MX-2008 segment small, complete sequence.
Baakal virus strain Palenque-C593-MX-2008 segment medium, complete sequence.
Baakal virus strain Palenque-C593-MX-2008 segment large, complete sequence.
Evidence Literature
   Reference PMID: 31500304
      Authors Kopp A, Hübner A, Zirkel F, Hobelsberger D, Estrada A, Jordan I, Gillespie TR, Drosten C, Junglen S
      Title Detection of Two Highly Diverse Peribunyaviruses in Mosquitoes from Palenque, Mexico.
      Journal Viruses. 2019 Sep 7;11(9).
   Comment Culture cell line: VeroE6, BHK-J, BHK-21, Tb1Lu, S.hisp, Huh7, A549, HEK293T, and U373
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Scientific NameBaboon orthoreovirus [TAX:75888]
LineageViruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Spinareoviridae; Orthoreovirus
RefSeq
Baboon orthoreovirus segment L1, complete genome.
Baboon orthoreovirus segment L2, complete genome.
Baboon orthoreovirus segment L3, complete genome.
Baboon orthoreovirus segment M1, complete genome.
Baboon orthoreovirus segment M2, complete genome.
Baboon orthoreovirus segment M3, complete genome.
Baboon orthoreovirus segment S1, complete genome.
Baboon orthoreovirus segment S2, complete genome.
Baboon orthoreovirus segment S4, complete genome.
Baboon orthoreovirus segment S3, complete genome.
Evidence Literature
   Reference PMID: 21593159
      Authors Yan X, Parent KN, Goodman RP, Tang J, Shou J, Nibert ML, Duncan R, Baker TS
      Title Virion structure of baboon reovirus, a fusogenic orthoreovirus that lacks an adhesion fiber.
      Journal J Virol. 2011 Aug;85(15):7483-95.
   Comment Culture cell line: Vero cells
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Scientific NameBarmah Forest virus [TAX:11020]
LineageViruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus
RefSeq
Barmah Forest virus, complete genome.
Evidence Literature
   Reference PMID: 9018152
      Authors Lee E, Stocks C, Lobigs P, Hislop A, Straub J, Marshall I, Weir R, Dalgarno L
      Title Nucleotide sequence of the Barmah Forest virus genome.
      Journal Virology. 1997 Jan 20;227(2):509-14.
   Comment Culture cell line: Vero cells
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Scientific Namebat adenovirus 3 [TAX:2758098]
LineageViruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Bat mastadenovirus A
RefSeq
Bat adenovirus 3 strain TJM, complete genome.
Evidence Literature
   Reference PMID: 20089640
      Authors Li Y, Ge X, Zhang H, Zhou P, Zhu Y, Zhang Y, Yuan J, Wang LF, Shi Z
      Title Host range, prevalence, and genetic diversity of adenoviruses in bats.
      Journal J Virol. 2010 Apr;84(8):3889-97.
   Comment Culture cell line: BtMsK, MDCK, PK-15, HEK293, Vero, Vero E6 cells
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Scientific NameBat mastadenovirus WIV10 [TAX:1788432]
LineageViruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Bat mastadenovirus C
RefSeq
Bat mastadenovirus WIV10, complete genome.
Evidence Literature
   Reference PMID: 27032099
      Authors Tan B, Yang XL, Ge XY, Peng C, Zhang YZ, Zhang LB, Shi ZL
      Title Novel bat adenoviruses with an extremely large E3 gene.
      Journal J Gen Virol. 2016 Jul;97(7):1625-1635.
   Comment Culture cell line: PK15, 293T, A549, LLC-MK2, Vero E6, Paki E9, RlKi, RcKi cells
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Scientific NameBat mastadenovirus WIV11 [TAX:1788433]
LineageViruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Bat mastadenovirus C
RefSeq
Bat mastadenovirus WIV11, complete genome.
Evidence Literature
   Reference PMID: 27032099
      Authors Tan B, Yang XL, Ge XY, Peng C, Zhang YZ, Zhang LB, Shi ZL
      Title Novel bat adenoviruses with an extremely large E3 gene.
      Journal J Gen Virol. 2016 Jul;97(7):1625-1635.
   Comment Culture cell line: PK15, 293T, A549, LLC-MK2, Vero E6, Paki E9, RlKi, RcKi cells
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Scientific NameBat mastadenovirus WIV9 [TAX:1788436]
LineageViruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Bat mastadenovirus C
RefSeq
Bat mastadenovirus WIV9, complete genome.
Evidence Literature
   Reference PMID: 27032099
      Authors Tan B, Yang XL, Ge XY, Peng C, Zhang YZ, Zhang LB, Shi ZL
      Title Novel bat adenoviruses with an extremely large E3 gene.
      Journal J Gen Virol. 2016 Jul;97(7):1625-1635.
   Comment Culture cell line: PK15, 293T, A549, LLC-MK2, Vero E6, Paki E9, RlKi, RcKi cells
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Scientific NameBat SARS-like coronavirus WIV1 [TAX:1415852]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus
GenBank
Bat SARS-like coronavirus WIV1, complete genome.
Evidence Literature
   Reference PMID: 24172901
      Authors Ge XY, Li JL, Yang XL, Chmura AA, Zhu G, Epstein JH, Mazet JK, Hu B, Zhang W, Peng C, Zhang YJ, Luo CM, Tan B, Wang N, Zhu Y, Crameri G, Zhang SY, Wang LF, Daszak P, Shi ZL
      Title Isolation and characterization of a bat SARS-like coronavirus that uses the ACE2 receptor.
      Journal Nature. 2013 Nov 28;503(7477):535-8.
   Comment Culture cell line: Vero E6, RSKT, PK-15, A549
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Scientific NameBeAn 58058 virus [TAX:67082]
LineageViruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Oryzopoxvirus; unclassified Oryzopoxvirus
RefSeq
BeAn 58058 virus, complete genome.
Evidence Literature
   Reference PMID: 28254970
      Authors Wanzeller AL, Souza AL, Azevedo RS, Júnior EC, Filho LC, Oliveira RS, Lemos PS, Júnior JV, Vasconcelos PF
      Title Complete Genome Sequence of the BeAn 58058 Virus Isolated from <i>Oryzomys</i> sp. Rodents in the Amazon Region of Brazil.
      Journal Genome Announc. 2017 Mar 2;5(9).
   Comment Culture cell line: Vero cells
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Scientific NameBellavista virus [TAX:1856565]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus bellavistaense
RefSeq
Bellavista virus isolate PRD0552 segment L RNA-dependent RNA polymerase gene, complete cds.
Bellavista virus isolate PRD0552 segment S nucleocapsid protein and nonstructural protein genes, complete cds.
Bellavista virus isolate PRD0552 segment M polyprotein gene, complete cds.
Evidence Literature
   Reference PMID: 27834712
      Authors Hang J, Yang Y, Kuschner RA, Evangelista J, Astete H, Halsey ES, Kochel TJ, Forshey BM
      Title Genome Sequence of Bellavista Virus, a Novel Orthobunyavirus Isolated from a Pool of Mosquitoes Captured near Iquitos, Peru.
      Journal Genome Announc. 2016 Nov 10;4(6).
   Comment Culture cell line: Vero 76, C6/36
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Scientific NameBellinger River virus [TAX:2301728]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Tornidovirineae; Tobaniviridae; Serpentovirinae; Pregotovirus; Snaturtovirus; Berisnavirus 1
RefSeq
Bellinger River virus isolate J248, complete genome.
Evidence Literature
   Reference PMID: 30356240
      Authors Zhang J, Finlaison DS, Frost MJ, Gestier S, Gu X, Hall J, Jenkins C, Parrish K, Read AJ, Srivastava M, Rose K, Kirkland PD
      Title Identification of a novel nidovirus as a potential cause of large scale mortalities in the endangered Bellinger River snapping turtle (Myuchelys georgesi).
      Journal PLoS One. 2018;13(10):e0205209.
   Comment Culture cell line: BGM, Vero, CV-1 cells
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Scientific NameBogoria virus [TAX:2767007]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus bogoriaense
RefSeq
Bogoria virus strain SP105-KE-2016 segment M, complete sequence.
Bogoria virus strain SP105-KE-2016 segment L, complete sequence.
Bogoria virus strain SP105-KE-2016 segment S, complete sequence.
Evidence Literature
   Reference PMID: 32878929
      Authors Marklewitz M, Tchouassi DP, Hieke C, Heyde V, Torto B, Sang R, Junglen S
      Title Insights into the Evolutionary Origin of Mediterranean Sandfly Fever Viruses.
      Journal mSphere. 2020 Sep 2;5(5).
   Comment Culture cell line:VeroE6, C6/36, LLC-MK2, LL-5, PP-9 and BHK-21
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Scientific NameBorna disease virus 2 [TAX:1714622]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Bornaviridae; Orthobornavirus; Orthobornavirus bornaense
RefSeq
Borna disease virus 2, complete genome.
Evidence Literature
   Reference PMID: 11602780
      Authors Pleschka S, Staeheli P, Kolodziejek J, Richt JA, Nowotny N, Schwemmle M
      Title Conservation of coding potential and terminal sequences in four different isolates of Borna disease virus.
      Journal J Gen Virol. 2001 Nov;82(Pt 11):2681-2690.
   Comment Culture cell line: Vero cells
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Scientific NameBrazoran virus [TAX:1368616]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus brazoriaense
RefSeq
Brazoran virus segment S, complete sequence.
Brazoran virus segment M, complete sequence.
Brazoran virus segment L, complete sequence.
Evidence Literature
   Reference PMID: 23791018
      Authors Lanciotti RS, Kosoy OI, Bosco-Lauth AM, Pohl J, Stuchlik O, Reed M, Lambert AJ
      Title Isolation of a novel orthobunyavirus (Brazoran virus) with a 1.7 kb S segment that encodes a unique nucleocapsid protein possessing two putative functional domains.
      Journal Virology. 2013 Sep;444(1-2):55-63.
   Comment Culture cell line: Vero, Vero E6, and LLC-MK2 cells
Culture cell line: Vero, Vero E6, and LLC-MK2 cells
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Scientific NameCabassou virus [TAX:60879]
LineageViruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus
RefSeq
Cabassou virus strain CaAr 508, complete genome.
Evidence Literature
   Reference PMID: 9886206
      Authors Kinney RM, Pfeffer M, Tsuchiya KR, Chang GJ, Roehrig JT
      Title Nucleotide sequences of the 26S mRNAs of the viruses defining the Venezuelan equine encephalitis antigenic complex.
      Journal Am J Trop Med Hyg. 1998 Dec;59(6):952-64.
   Comment Culture cell line: Vero cells
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Scientific NameCaraparu virus [TAX:192196]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus caraparuense
RefSeq
Caraparu virus strain BeAn3994 polyprotein gene, complete cds.
Caraparu virus strain BeAn3994 nucleocapsid protein and nonstructural protein genes, complete cds.
Caraparu virus strain BeAn3994 RNA-dependent RNA polymerase gene, complete cds.
Evidence Literature
   Reference PMID: 17705031
      Authors de Brito Magalhães CL, Quinan BR, Novaes RF, dos Santos JR, Kroon EG, Bonjardim CA, Ferreira PC
      Title Caraparu virus (group C Orthobunyavirus): sequencing and phylogenetic analysis based on the conserved region 3 of the RNA polymerase gene.
      Journal Virus Genes. 2007 Dec;35(3):681-4.
   Comment Culture cell line: Vero cells
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Scientific NameCercopithecine alphaherpesvirus 2 [TAX:10317]
LineageViruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Alphaherpesvirinae; Simplexvirus; Simplexvirus cercopithecinealpha2
RefSeq
Cercopithecine herpesvirus 2, complete genome.
Evidence RefSeq
Evidence Literature
   Reference PMID: 15629785
      Authors Tyler SD, Peters GA, Severini A
      Title Complete genome sequence of cercopithecine herpesvirus 2 (SA8) and comparison with other simplexviruses.
      Journal Virology. 2005 Jan 20;331(2):429-40.
   Comment Culture cell line: Vero cell
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Scientific NameCercopithecine alphaherpesvirus 9 [TAX:35246]
LineageViruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Alphaherpesvirinae; Varicellovirus; Varicellovirus cercopithecinealpha9
RefSeq
Cercopithecine herpesvirus 9, complete genome.
Evidence UniProt
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Scientific NameCercopithecine betaherpesvirus 5 [TAX:50292]
LineageViruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Betaherpesvirinae; Cytomegalovirus; Cytomegalovirus cercopithecinebeta5
RefSeq
Cercopithecine herpesvirus 5 strain 2715, complete genome.
Evidence RefSeq
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Scientific NameChikungunya virus Wuerzburg 1 [TAX:466217]
LineageViruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus; Chikungunya virus
GenBank
Chikungunya virus Wuerzburg 1, complete genome.
Evidence Literature
   Reference PMID: 18351388
      Authors Kowalzik S, Xuan NV, Weissbrich B, Scheiner B, Schied T, Drosten C, Müller A, Stich A, Rethwilm A, Bodem J
      Title Characterisation of a chikungunya virus from a German patient returning from Mauritius and development of a serological test.
      Journal Med Microbiol Immunol. 2008 Dec;197(4):381-6.
   Comment Culture cell line: Vero cells (African green monkey kidney cells)
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Scientific NameChilibre virus [TAX:629728]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Pacuvirus; Pacuvirus chilibreense
RefSeq
Chilibre virus isolate VP-118D segment S, complete sequence.
Chilibre virus isolate VP-118D segment L, complete sequence.
Chilibre virus isolate VP-118D segment M, complete sequence.
Evidence Literature
   Reference PMID: 37018120
      Authors Jancarova M, Polanska N, Volf P, Dvorak V
      Title The role of sand flies as vectors of viruses other than phleboviruses.
      Journal J Gen Virol. 2023 Apr;104(4).
   Comment Culture cell line: Vero cells
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Scientific NameChipmunk parvovirus [TAX:56820]
LineageViruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Erythroparvovirus; Erythroparvovirus rodent1
RefSeq
Chipmunk parvovirus NS1, NS2, VP1, and VP2 genes, complete cds.
Evidence Literature
   Reference PMID: 21151930
      Authors Chen Z, Chen AY, Cheng F, Qiu J
      Title Chipmunk parvovirus is distinct from members in the genus Erythrovirus of the family Parvoviridae.
      Journal PLoS One. 2010 Dec 3;5(12):e15113.
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Scientific NameCotia virus [TAX:39444]
LineageViruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Oryzopoxvirus
GenBank
Cotia virus strain SPAn880, complete genome.
Evidence Literature
   Reference PMID: 25477400
      Authors Ibrahim MS, Antwerpen M, Georgi E, Vette P, Zoeller G, Meyer H
      Title Complete Genome Sequence of the Embu Virus Strain SPAn880.
      Journal Genome Announc. 2014 Dec 4;2(6).
   Comment Culture cell line: MA104 cells
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Scientific NameCoxsackievirus A10 [TAX:42769]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus A
GenBank
Human coxsackievirus A10 strain CVA10/SD/CHN/09, complete genome.
Evidence Literature
   Reference PMID: 21543560
      Authors Hu YF, Yang F, Du J, Dong J, Zhang T, Wu ZQ, Xue Y, Jin Q
      Title Complete genome analysis of coxsackievirus A2, A4, A5, and A10 strains isolated from hand, foot, and mouth disease patients in China revealing frequent recombination of human enterovirus A.
      Journal J Clin Microbiol. 2011 Jul;49(7):2426-34.
   Comment Culture cell line: Vero cells
DBLINKS
ViralZone:  

Scientific NameCoxsackievirus A4 [TAX:42785]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus A
GenBank
Human coxsackievirus A4 strain CVA4/SZ/CHN/09, complete genome.
Evidence Literature
   Reference PMID: 21543560
      Authors Hu YF, Yang F, Du J, Dong J, Zhang T, Wu ZQ, Xue Y, Jin Q
      Title Complete genome analysis of coxsackievirus A2, A4, A5, and A10 strains isolated from hand, foot, and mouth disease patients in China revealing frequent recombination of human enterovirus A.
      Journal J Clin Microbiol. 2011 Jul;49(7):2426-34.
   Comment Culture cell line: Vero cells
DBLINKS
ViralZone:  

Scientific NameCoxsackievirus A5 [TAX:42786]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus A
GenBank
Human coxsackievirus A5 strain CVA5/SD/CHN/09, complete genome.
Evidence Literature
   Reference PMID: 21543560
      Authors Hu YF, Yang F, Du J, Dong J, Zhang T, Wu ZQ, Xue Y, Jin Q
      Title Complete genome analysis of coxsackievirus A2, A4, A5, and A10 strains isolated from hand, foot, and mouth disease patients in China revealing frequent recombination of human enterovirus A.
      Journal J Clin Microbiol. 2011 Jul;49(7):2426-34.
   Comment Culture cell line: Vero cells
DBLINKS
ViralZone:  

Scientific NameCulex theileri flavivirus [TAX:1244563]
LineageViruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus; unclassified Flavivirus
RefSeq
Culex theileri flavivirus, complete genome.
Evidence Literature
   Reference PMID: 28855097
      Authors Sadeghi M, Popov V, Guzman H, Phan TG, Vasilakis N, Tesh R, Delwart E
      Title Genomes of viral isolates derived from different mosquitos species.
      Journal Virus Res. 2017 Oct 15;242:49-57.
   Comment Culture cell line: 6/36, Vero cells
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameDashli virus [TAX:1764087]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus dashliense
RefSeq
Dashli virus strain 131 segment S, complete sequence.
Dashli virus strain 131 segment M, complete sequence.
Dashli virus strain 131 segment L, complete sequence.
Evidence Literature
   Reference PMID: 29281639
      Authors Alkan C, Moin Vaziri V, Ayhan N, Badakhshan M, Bichaud L, Rahbarian N, Javadian EA, Alten B, de Lamballerie X, Charrel RN
      Title Isolation and sequencing of Dashli virus, a novel Sicilian-like virus in sandflies from Iran; genetic and phylogenetic evidence for the creation of one novel species within the Phlebovirus genus in the Phenuiviridae family.
      Journal PLoS Negl Trop Dis. 2017 Dec;11(12):e0005978.
   Comment Culture cell line: Vero cells
DBLINKS
ViralZone:  

Scientific NameDeerpox virus W-1170-84 [TAX:305676]
LineageViruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Cervidpoxvirus; Mule deerpox virus
GenBank
Deerpox virus W-1170-84, complete genome.
Evidence Literature
   Reference PMID: 15613325
      Authors Afonso CL, Delhon G, Tulman ER, Lu Z, Zsak A, Becerra VM, Zsak L, Kutish GF, Rock DL
      Title Genome of deerpox virus.
      Journal J Virol. 2005 Jan;79(2):966-77.
   Comment Culture cell line: Vero cells
DBLINKS
ViralZone:  

Scientific NameDurania virus [TAX:1006585]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus duraniaense
RefSeq
Durania virus strain Co Ar 171162 segment L, complete sequence.
Durania virus strain Co Ar 171162 segment M, complete sequence.
Durania virus strain Co Ar 171162 segment S, complete sequence.
Evidence Literature
   Reference PMID: 21325481
      Authors Palacios G, Travassos da Rosa A, Savji N, Sze W, Wick I, Guzman H, Hutchison S, Tesh R, Lipkin WI
      Title Aguacate virus, a new antigenic complex of the genus Phlebovirus (family Bunyaviridae).
      Journal J Gen Virol. 2011 Jun;92(Pt 6):1445-1453.
   Comment Culture Cell Line: vero cells
Culture Cell Line: vero cells
DBLINKS
ViralZone:  

Scientific NameDurham virus [TAX:710545]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Tupavirus; Tupavirus durham
RefSeq
Durham virus nucleocapsid, phosphoprotein, putative protein C, matrix protein, small hydrophobic protein, and glycoprotein genes, complete cds; and RNA polymerase gene, partial cds.
Evidence Literature
   Reference PMID: 20863863
      Authors Allison AB, Palacios G, Travassos da Rosa A, Popov VL, Lu L, Xiao SY, DeToy K, Briese T, Lipkin WI, Keel MK, Stallknecht DE, Bishop GR, Tesh RB
      Title Characterization of Durham virus, a novel rhabdovirus that encodes both a C and SH protein.
      Journal Virus Res. 2011 Jan;155(1):112-22.
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameEchovirus E11 [TAX:12078]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus B
GenBank
Human echovirus 11, isolate HUN-1108, complete virion genome.
Evidence Literature
   Reference PMID: 15231386
      Authors Chevaliez S, Szendröi A, Caro V, Balanant J, Guillot S, Berencsi G, Delpeyroux F
      Title Molecular comparison of echovirus 11 strains circulating in Europe during an epidemic of multisystem hemorrhagic disease of infants indicates that evolution generally occurs by recombination.
      Journal Virology. 2004 Jul 20;325(1):56-70.
   Comment Culture cell line: Vero cells
DBLINKS
ViralZone:  

Scientific NameEmbossos virus [TAX:2767008]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus embossosense
RefSeq
Embossos virus strain SP288-KE-2016 segment L, complete sequence.
Embossos virus strain SP288-KE-2016 segment S, complete sequence.
Embossos virus strain SP288-KE-2016 segment M, complete sequence.
Evidence Other
   Comment Culture cell line:VeroE6, C6/36, LLC-MK2, LL-5, PP-9 and BHK-21
DBLINKS
ViralZone:  

Scientific Nameenterovirus A124 [TAX:2870395]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus A
GenBank
Simian enterovirus 46 strain RNM5, complete genome.
Evidence Literature
   Reference PMID: 18941864
      Authors Oberste MS, Jiang X, Maher K, Nix WA, Jiang B
      Title The complete genome sequences for three simian enteroviruses isolated from captive primates.
      Journal Arch Virol. 2008;153(11):2117-22.
   Comment Culture cell line: MA104 cells (African green monkey kidney cell)
DBLINKS
ViralZone:  

Scientific NameEnterovirus A92 [TAX:469959]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus; Enterovirus A
GenBank
Human enterovirus 92 strain RJG7, complete genome.
Evidence Literature
   Reference PMID: 18941864
      Authors Oberste MS, Jiang X, Maher K, Nix WA, Jiang B
      Title The complete genome sequences for three simian enteroviruses isolated from captive primates.
      Journal Arch Virol. 2008;153(11):2117-22.
   Comment Culture cell line: MA104 (African green monkey kidney cell)
DBLINKS
ViralZone:  

Scientific NameEnterovirus J [TAX:1330521]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus
RefSeq
Enterovirus J strain 1631, complete genome.
Enterovirus J strain N203, complete genome.
Evidence Literature
   Reference PMID: 18024906
      Authors Oberste MS, Maher K, Pallansch MA
      Title Complete genome sequences for nine simian enteroviruses.
      Journal J Gen Virol. 2007 Dec;88(Pt 12):3360-72.
DBLINKS
KEGG BRITE:  
ICTV:  
ViralZone:  

Scientific NameEquine encephalosis virus [TAX:201490]
LineageViruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus
RefSeq
Equine encephalosis virus isolate HS103/06 VP1 gene, complete cds.
Equine encephalosis virus isolate HS103/06 VP3 gene, complete cds.
Equine encephalosis virus isolate HS103/06 NS1 gene, complete cds.
Equine encephalosis virus isolate HS103/06 VP5 gene, complete cds.
Equine encephalosis virus isolate HS103/06 VP7 gene, complete cds.
Equine encephalosis virus isolate HS103/06 VP6 gene, complete cds.
Equine encephalosis virus isolate HS103/06 NS3 gene, complete cds.
Equine encephalosis virus isolate HS103/06 VP4 gene, complete cds.
Equine encephalosis virus isolate HS103/06 VP2 gene, complete cds.
Equine encephalosis virus isolate HS103/06 NS2 gene, complete cds.
Evidence Literature
   Reference PMID: 19264638
      Authors Potgieter AC, Page NA, Liebenberg J, Wright IM, Landt O, van Dijk AA
      Title Improved strategies for sequence-independent amplification and sequencing of viral double-stranded RNA genomes.
      Journal J Gen Virol. 2009 Jun;90(Pt 6):1423-1432.
   Comment Culture cell line:BHK, Vero
DBLINKS
ICTV:  
ViralZone:  

Scientific NameEstero Real virus [TAX:2170057]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Nairoviridae; Orthonairovirus; Orthonairovirus esteroense
RefSeq
Estero Real orthobunyavirus isolate K329 segment M glycoprotein precursor, gene, complete cds.
Estero Real orthobunyavirus isolate K329 segment L RNA-dependent RNA polymerase gene, complete cds.
Estero Real orthobunyavirus isolate K329 segment S nucleocapsid gene, complete cds.
Evidence Literature
   Reference PMID: 29893199
      Authors Aguilar PV, Marciel de Souza W, Silvas JA, Wood T, Widen S, Fumagalli MJ, Nunes MRT
      Title Genetic Characterization of the Patois Serogroup (Genus <i>Orthobunyavirus</i>; Family <i>Peribunyaviridae</i>) and Evidence That Estero Real Virus is a Member of the Genus <i>Orthonairovirus</i>.
      Journal Am J Trop Med Hyg. 2018 Aug;99(2):451-457.
   Comment Culture cell line: Vero cells Ornithodoros tadaridae
DBLINKS
ViralZone:  

Scientific NameEverglades virus [TAX:2083198]
LineageViruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus
RefSeq
Everglades virus, complete sequence.
Evidence Literature
   Reference PMID: 9886206
      Authors Kinney RM, Pfeffer M, Tsuchiya KR, Chang GJ, Roehrig JT
      Title Nucleotide sequences of the 26S mRNAs of the viruses defining the Venezuelan equine encephalitis antigenic complex.
      Journal Am J Trop Med Hyg. 1998 Dec;59(6):952-64.
   Comment Culture cell line: Vero, Peikin duck embryo, BHK-21 cells
DBLINKS
KEGG BRITE:  
ICTV:  
ViralZone:  

Scientific NameFarmington virus [TAX:1027468]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; unclassified Rhabdoviridae
RefSeq
Farmington virus strain CT 114, complete genome.
Evidence Literature
   Reference PMID: 23816310
      Authors Palacios G, Forrester NL, Savji N, Travassos da Rosa AP, Guzman H, Detoy K, Popov VL, Walker PJ, Lipkin WI, Vasilakis N, Tesh RB
      Title Characterization of Farmington virus, a novel virus from birds that is distantly related to members of the family Rhabdoviridae.
      Journal Virol J. 2013 Jul 1;10:219.
   Comment Culture cell line: Vero E6 cells
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameFengkai orbivirus [TAX:1692107]
LineageViruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus; unclassified Orbivirus; Tibet orbivirus
RefSeq
Fengkai orbivirus isolate D181/2008 segment 1, complete sequence.
Fengkai orbivirus isolate D181/2008 segment 5, complete sequence.
Fengkai orbivirus isolate D181/2008 segment 7, complete sequence.
Fengkai orbivirus isolate D181/2008 segment 8, complete sequence.
Fengkai orbivirus isolate D181/2008 segment 10, complete sequence.
Fengkai orbivirus isolate D181/2008 segment 2, complete sequence.
Fengkai orbivirus isolate D181/2008 segment 3, complete sequence.
Fengkai orbivirus isolate D181/2008 segment 4, complete sequence.
Fengkai orbivirus isolate D181/2008 segment 6, complete sequence.
Fengkai orbivirus isolate D181/2008 segment 9, complete sequence.
Evidence Literature
   Reference PMID: 32437817
      Authors Wu, Tan Q, Zhang H, Huang P, Zhou H, Zhang X, Sun J, Huang L, Liang G
      Title Genomic and biological features of a novel orbivirus isolated from mosquitoes, in China.
      Journal Virus Res. 2020 Aug;285:197990.
   Comment Culture cell line: C6/36, BHK-21, Vero
culture cell line: C6/36, Vero and BHK-21
Culture cell line:C6/36, BHK-21, Vero
Culture cell line:C6/36, BHK-21, Vero
DBLINKS
ViralZone:  

Scientific NameFort Sherman virus [TAX:273345]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus shermanense
RefSeq
Fort Sherman virus strain 86MSP18 segment M, complete sequence.
Fort Sherman virus strain 86MSP18 segment S, complete sequence.
Fort Sherman virus strain 86MSP18 segment L, complete sequence.
Evidence Literature
   Reference PMID: 32009301
      Authors de Oliveira Filho EF, Carneiro IO, Ribas JRL, Fischer C, Marklewitz M, Junglen S, Netto EM, Franke CR, Drexler JF
      Title Identification of animal hosts of Fort Sherman virus, a New World zoonotic orthobunyavirus.
      Journal Transbound Emerg Dis. 2020 Jul;67(4):1433-1441.
   Comment Culture cell line:Ver cells
DBLINKS
ViralZone:  

Scientific NameGuertu virus [TAX:1763596]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Bandavirus; Bandavirus guertuense
RefSeq
Guertu virus strain DXM segment M, complete sequence.
Guertu virus strain DXM segment S, complete sequence.
Guertu virus strain DXM segment L, complete sequence.
Evidence Literature
   Reference PMID: 29802259
      Authors Shen S, Duan X, Wang B, Zhu L, Zhang Y, Zhang J, Wang J, Luo T, Kou C, Liu D, Lv C, Zhang L, Chang C, Su Z, Tang S, Qiao J, Moming A, Wang C, Abudurexiti A, Wang H, Hu Z, Zhang Y, Sun S, Deng F
      Title A novel tick-borne phlebovirus, closely related to severe fever with thrombocytopenia syndrome virus and Heartland virus, is a potential pathogen.
      Journal Emerg Microbes Infect. 2018 May 25;7(1):95.
   Comment Culture cell line :Vero , DH82 , BHK-21 , 293 , and Hep G2
DBLINKS
ViralZone:  

Scientific NameHazara virus [TAX:11596]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Nairoviridae; Orthonairovirus; Orthonairovirus hazaraense
RefSeq
Hazara virus isolate JC280 segment L, complete sequence.
Hazara virus isolate JC280 segment M, complete sequence.
Hazara virus isolate JC280 segment S, complete sequence.
Evidence Literature
   Reference PMID: 33291703
      Authors Hartlaub J, von Arnim F, Fast C, Somova M, Mirazimi A, Groschup MH, Keller M
      Title Sheep and Cattle Are Not Susceptible to Experimental Inoculation with Hazara Orthonairovirus, a Tick-Borne Arbovirus Closely Related to CCHFV.
      Journal Microorganisms. 2020 Dec 4;8(12).
   Comment Culture cell line: Vero E6 cells
DBLINKS
ViralZone:  

Scientific NameHerbert virus strain F23/CI/2004 [TAX:1230253]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Herbevirus; Herbevirus herberti
RefSeq
Herbert virus strain F23/CI/2004 segment S, complete sequence.
Herbert virus strain F23/CI/2004 segment M, complete sequence.
Herbert virus strain F23/CI/2004 segment L, complete sequence.
Evidence Literature
   Reference PMID: 24067954
      Authors Marklewitz M, Zirkel F, Rwego IB, Heidemann H, Trippner P, Kurth A, Kallies R, Briese T, Lipkin WI, Drosten C, Gillespie TR, Junglen S
      Title Discovery of a unique novel clade of mosquito-associated bunyaviruses.
      Journal J Virol. 2013 Dec;87(23):12850-65.
   Comment Culture cell line:C6/36, Vero E6
DBLINKS
ViralZone:  

Scientific NameHervey virus [TAX:1554500]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Rubulavirinae; Pararubulavirus; Pararubulavirus herveyense
RefSeq
UNVERIFIED: Hervey virus isolate BO6 genomic sequence.
Evidence Literature
   Reference PMID: 29390028
      Authors Kohl C, Tachedjian M, Todd S, Monaghan P, Boyd V, Marsh GA, Crameri G, Field H, Kurth A, Smith I, Wang LF
      Title Hervey virus: Study on co-circulation with Henipaviruses in Pteropid bats within their distribution range from Australia to Africa.
      Journal PLoS One. 2018;13(2):e0191933.
   Comment Culture cell line: Vero E6, Bovine kidney, PaKi, PaHe, Equine kidney, CRFK and LoVo cells
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameHom-1 vesivirus [TAX:1960046]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Vesivirus; unclassified Vesivirus
RefSeq
Hom-1 vesivirus, complete genome.
Evidence Literature
   Reference PMID: 28196955
      Authors Sosnovtsev SV, Sandoval-Jaime C, Parra GI, Tin CM, Jones RW, Soden J, Barnes D, Freeth J, Smith AW, Green KY
      Title Identification of Human Junctional Adhesion Molecule 1 as a Functional Receptor for the Hom-1 Calicivirus on Human Cells.
      Journal MBio. 2017 Feb 14;8(1).
   Comment Culture cell line: Vero cells (african green monkey kidney cells)
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameHuman parechovirus 2 [TAX:39085]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Parechovirus; Parechovirus A
GenBank
Human parechovirus 2 complete genome.
Evidence Literature
   Reference PMID: 9820139
      Authors Ghazi F, Hughes PJ, Hyypiä T, Stanway G
      Title Molecular analysis of human parechovirus type 2 (formerly echovirus 23).
      Journal J Gen Virol. 1998 Nov;79 ( Pt 11):2641-50.
   Comment Culture cell line: A-Vero cells
DBLINKS
ViralZone:  

Scientific NameHuman parechovirus 3 [TAX:195055]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Parechovirus; Parechovirus A
GenBank
Human parechovirus 3 genomic RNA, complete genome, isolate Can82853-01.
Evidence Literature
   Reference PMID: 16254961
      Authors Abed Y, Boivin G
      Title Molecular characterization of a Canadian human parechovirus (HPeV)-3 isolate and its relationship to other HPeVs.
      Journal J Med Virol. 2005 Dec;77(4):566-70.
   Comment Culture cell line:LLC-MK2 cells, Vero cells
DBLINKS
ViralZone:  

Scientific NameHuman parechovirus 6 [TAX:411152]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Parechovirus; Parechovirus A
GenBank
Human parechovirus 6 genomic RNA, complete genome, strain: NII561-2000.
Evidence Literature
   Reference PMID: 17553229
      Authors Watanabe K, Oie M, Higuchi M, Nishikawa M, Fujii M
      Title Isolation and characterization of novel human parechovirus from clinical samples.
      Journal Emerg Infect Dis. 2007 Jun;13(6):889-95.
   Comment Culture cell line:Vero cells
DBLINKS
ViralZone:  

Scientific NameIxcanal virus [TAX:1006586]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus ixcanalense
RefSeq
Ixcanal virus strain CA Ar 170897 segment M, complete sequence.
Ixcanal virus strain CA Ar 170897 segment L, complete sequence.
Ixcanal virus strain CA Ar 170897 segment S, complete sequence.
Evidence Literature
   Reference PMID: 21325481
      Authors Palacios G, Travassos da Rosa A, Savji N, Sze W, Wick I, Guzman H, Hutchison S, Tesh R, Lipkin WI
      Title Aguacate virus, a new antigenic complex of the genus Phlebovirus (family Bunyaviridae).
      Journal J Gen Virol. 2011 Jun;92(Pt 6):1445-1453.
   Comment Culture Cell Line: Vero cells
DBLINKS
ViralZone:  

Scientific NameJamestown Canyon virus [TAX:35511]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus jamestownense
RefSeq
Jamestown Canyon virus strain 61V2235 nucleoprotein and NSs protein genes, complete cds.
Jamestown Canyon virus strain 61V2235 L protein gene, complete cds.
Jamestown Canyon virus strain 61V2235 M polyprotein gene, complete cds.
DISEASE
H02511  
Jamestown Canyon encephalitis
Evidence Literature
   Reference PMID: 21435230
      Authors Bennett RS, Nelson JT, Gresko AK, Murphy BR, Whitehead SS
      Title The full genome sequence of three strains of Jamestown Canyon virus and their pathogenesis in mice or monkeys.
      Journal Virol J. 2011 Mar 24;8:136.
   Comment culture cell line:Vero 6, mouse brain
DBLINKS
KEGG GENOME:  
ViralZone:  

Scientific NameJapanese macaque simian foamy virus [TAX:2170198]
LineageViruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Spumaretrovirinae; Simiispumavirus
RefSeq
Japanese macaque simian foamy virus proviral DNA, complete genome, clone: JM356.
Evidence Literature
   Reference PMID: 25017058
      Authors Yoshikawa R, Nakagawa S, Okamoto M, Miyazawa T
      Title Construction of an infectious clone of simian foamy virus of Japanese macaque (SFVjm) and phylogenetic analyses of SFVjm isolates.
      Journal Gene. 2014 Sep 10;548(1):149-54.
   Comment Culture cell line: 293T, Vero, Mus dunni tail fibroblast cells
DBLINKS
KEGG BRITE:  
ICTV:  
ViralZone:  

Scientific NameJos virus [TAX:1027466]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Thogotovirus; Thogotovirus josense
RefSeq
Jos virus segment 3 PA gene, complete cds.
Jos virus segment 4 glycoprotein gene, complete cds.
Jos virus segment 1 PB2 gene, complete cds.
Jos virus segment 6 ML gene, complete cds.
Jos virus segment 2 PB1 gene, partial cds.
Jos virus segment 5 nucleoprotein gene, complete cds.
Evidence Literature
   Reference PMID: 21994326
      Authors Bussetti AV, Palacios G, Travassos da Rosa A, Savji N, Jain K, Guzman H, Hutchison S, Popov VL, Tesh RB, Lipkin WI
      Title Genomic and antigenic characterization of Jos virus.
      Journal J Gen Virol. 2012 Feb;93(Pt 2):293-298.
   Comment Culture cell line: Vero cells
DBLINKS
ViralZone:  

Scientific NameKabuto mountain virus [TAX:1851087]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Uukuvirus; Uukuvirus kabutoense
RefSeq
Kabuto mountain virus RdRp gene for RNA-dependent RNA polymerase, complete cds, strain: T32.
Kabuto mountain virus GPs gene for envelope glycoproteins, complete cds, strain: T32.
Kabuto mountain virus N, NSs genes for nucleocapsid protein, nonstructural protein, complete cds, strain: T32.
Evidence Literature
   Reference PMID: 29197549
      Authors Ejiri H, Lim CK, Isawa H, Yamaguchi Y, Fujita R, Takayama-Ito M, Kuwata R, Kobayashi D, Horiya M, Posadas-Herrera G, Iizuka-Shiota I, Kakiuchi S, Katayama Y, Hayashi T, Sasaki T, Kobayashi M, Morikawa S, Maeda K, Mizutani T, Kaku K, Saijo M, Sawabe K
      Title Isolation and characterization of Kabuto Mountain virus, a new tick-borne phlebovirus from Haemaphysalis flava ticks in Japan.
      Journal Virus Res. 2018 Jan 15;244:252-261.
   Comment Culture Cell Line: HmLu-1 and BHK-21and Vero E6
Culture Cell Line:HmLu-1 and BHK-21and Vero E6
DBLINKS
ViralZone:  

Scientific NameKaeng Khoi virus [TAX:307164]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus kaengkhoiense
RefSeq
Kaeng Khoi virus strain PSC-19 segment L polymerase gene, complete cds.
Kaeng Khoi virus strain PSC-19 segment M glycoprotein precursor gene, complete cds.
Kaeng Khoi virus strain PSC-19 segment S nucleoprotein and nonstructural protein NSs genes, complete cds.
Evidence Literature
   Reference PMID: 25188437
      Authors Groseth A, Mampilli V, Weisend C, Dahlstrom E, Porcella SF, Russell BJ, Tesh RB, Ebihara H
      Title Molecular characterization of human pathogenic bunyaviruses of the Nyando and Bwamba/Pongola virus groups leads to the genetic identification of Mojuí dos Campos and Kaeng Khoi virus.
      Journal PLoS Negl Trop Dis. 2014 Sep;8(9):e3147.
   Comment Culture Cell Line: Vero E6 cells
Cell Line: Vero E6 cells
Culture Cell Line: Vero E6 cells
DBLINKS
ViralZone:  

Scientific NameKarshi virus [TAX:64287]
LineageViruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus royalense; Royal Farm virus
GenBank
Karshi virus strain LEIV 2247, complete genome.
Evidence Literature
   Reference PMID: 18256443
      Authors Turell MJ, Whitehouse CA, Butler A, Baldwin C, Hottel H, Mores CN
      Title Assay for and replication of Karshi (mammalian tick-borne flavivirus group) virus in mice.
      Journal Am J Trop Med Hyg. 2008 Feb;78(2):344-7.
   Comment Vector: Ticks Culture cell line: Vero (African green monkey kidney cell)
Evidence Literature
   Reference PMID: 130853
      Authors Lvov DK, Neronov VM, Gromashevsky VL, Skvortsova TM, Berezina LK, Sidorova GA, Zhmaeva ZM, Gofman YA, Klimenko SM, Fomina KB
      Title "Karshi" virus, a new flavivirus (Togaviridae) isolated from Ornithodoros papillipes (Birula, 1895) ticks in Uzbek S.S.R.
      Journal Arch Virol. 1976;50(1-2):29-36.
   Comment Vector: Ticks Culture cell line: Vero (African green monkey kidney cell)
DBLINKS
ViralZone:  

Scientific NameKeystone virus [TAX:35514]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus keystoneense
RefSeq
Keystone virus strain B64-5587.05 segment M, complete sequence.
Keystone virus strain B64-5587.05 segment S, complete sequence.
Keystone virus strain B64-5587.05 segment L, complete sequence.
Evidence Literature
   Reference PMID: 29893806
      Authors Lednicky JA, White SK, Stephenson CJ, Cherabuddi K, Loeb JC, Moussatche N, Lednicky A, Morris JG Jr
      Title Keystone Virus Isolated From a Florida Teenager With Rash and Subjective Fever: Another Endemic Arbovirus in the Southeastern United States?
      Journal Clin Infect Dis. 2019 Jan 1;68(1):143-145.
   Comment Culture cell line: vero E6 cells and Neuro-2A cells
DBLINKS
ViralZone:  

Scientific NameKiborgoch virus [TAX:2767009]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus kiborgochense
RefSeq
Kiborgoch virus strain SSP39-KE-2016 segment M, complete sequence.
Kiborgoch virus strain SSP39-KE-2016 segment S, complete sequence.
Kiborgoch virus strain SSP39-KE-2016 segment L, complete sequence.
Evidence Literature
   Reference PMID: 32375386
      Authors Li Y, Gordon E, Idle A, Altan E, Seguin MA, Estrada M, Deng X, Delwart E
      Title Virome of a Feline Outbreak of Diarrhea and Vomiting Includes Bocaviruses and a Novel Chapparvovirus.
      Journal Viruses. 2020 May 4;12(5).
   Comment Culture cell line:VeroE6, C6/36, LLC-MK2, LL-5, PP-9 and BHK-21
DBLINKS
ViralZone:  

Scientific NameKundal virus [TAX:2290890]
LineageViruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Spinareoviridae; Coltivirus; Kundal coltivirus
RefSeq
Kundal virus strain MCL-13-T-316 segment 6, complete sequence.
Kundal virus strain MCL-13-T-316 segment 4, complete sequence.
Kundal virus strain MCL-13-T-316 segment 9, complete sequence.
Kundal virus strain MCL-13-T-316 segment 7, complete sequence.
Kundal virus strain MCL-13-T-316 segment 11, complete sequence.
Kundal virus strain MCL-13-T-316 segment 12, complete sequence.
Kundal virus strain MCL-13-T-316 segment 8, complete sequence.
Kundal virus strain MCL-13-T-316 segment 10, complete sequence.
Kundal virus strain MCL-13-T-316 segment 3, complete sequence.
Kundal virus strain MCL-13-T-316 segment 1, complete sequence.
Kundal virus strain MCL-13-T-316 segment 2, complete sequence.
Kundal virus strain MCL-13-T-316 segment 5, complete sequence.
Evidence Literature
   Reference PMID: 30971476
      Authors Yadav PD, Whitmer SLM, Sarkale P, Fei Fan Ng T, Goldsmith CS, Nyayanit DA, Esona MD, Shrivastava-Ranjan P, Lakra R, Pardeshi P, Majumdar TD, Francis A, Klena JD, Nichol ST, Ströher U, Mourya D
      Title Characterization of Novel Reoviruses Wad Medani Virus (Orbivirus) and Kundal Virus (Coltivirus) Collected from <i>Hyalomma anatolicum</i> Ticks in India during Surveillance for Crimean Congo Hemorrhagic Fever.
      Journal J Virol. 2019 Jul 1;93(13).
   Comment Culture Cell Line: Vero CCL-81 and BHK-21 cell lines
DBLINKS
ViralZone:  

Scientific NameLaibin virus [TAX:1633187]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Hantaviridae; Mammantavirinae; Mobatvirus; Mobatvirus laibinense
RefSeq
Laibin virus strain BT20 segment M, complete sequence.
Laibin virus strain BT20 segment S, complete sequence.
Laibin virus strain BT20 segment L, complete sequence.
Evidence Literature
   Reference PMID: 25643870
      Authors Xu L, Wu J, He B, Qin S, Xia L, Qin M, Li N, Tu C
      Title Novel hantavirus identified in black-bearded tomb bats, China.
      Journal Infect Genet Evol. 2015 Apr;31:158-60.
   Comment Culture cell line: Vero-E6 cells
DBLINKS
ViralZone:  

Scientific NameLake Chad virus [TAX:688438]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Quaranjavirus; Quaranjavirus chadense
RefSeq
Lake Chad virus isolate Ib An 38918 segment 1, complete sequence.
Lake Chad virus isolate Ib An 38918 segment 2, complete sequence.
Lake Chad virus isolate Ib An 38918 segment 3, complete sequence.
Lake Chad virus isolate Ib An 38918 segment 4, complete sequence.
Lake Chad virus isolate Ib An 38918 segment 5, complete sequence.
Lake Chad virus isolate Ib An 38918 segment 7, complete sequence.
Lake Chad virus isolate Ib An 38918 segment 6, complete sequence.
Evidence Literature
   Reference PMID: 19726499
      Authors Presti RM, Zhao G, Beatty WL, Mihindukulasuriya KA, da Rosa AP, Popov VL, Tesh RB, Virgin HW, Wang D
      Title Quaranfil, Johnston Atoll, and Lake Chad viruses are novel members of the family Orthomyxoviridae.
      Journal J Virol. 2009 Nov;83(22):11599-606.
   Comment Culture cell line: Vero cells
Culture cell line:Vero cells
DBLINKS
ViralZone:  

Scientific NameLake Victoria marburgvirus - Angola2005 [TAX:378830]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Filoviridae; Orthomarburgvirus; Orthomarburgvirus marburgense
GenBank
Lake Victoria marburgvirus - Angola2005 strain Ang0214, complete genome.
Evidence UniProt
DBLINKS
ViralZone:  

Scientific NameLake Victoria marburgvirus - Ci67 [TAX:448086]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Filoviridae; Orthomarburgvirus; Orthomarburgvirus marburgense
GenBank
Lake Victoria marburgvirus - Ci67, complete genome.
Evidence Literature
   Reference PMID: 17940965
      Authors Lofts LL, Ibrahim MS, Negley DL, Hevey MC, Schmaljohn AL
      Title Genomic differences between guinea pig lethal and nonlethal Marburg virus variants.
      Journal J Infect Dis. 2007 Nov 15;196 Suppl 2:S305-12.
   Comment Culture cell line: Vero E6 cells
DBLINKS
ViralZone:  

Scientific NameLjungan virus 145SL [TAX:172317]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Parechovirus; Parechovirus B; Ljungan virus 2
GenBank
Ljungan virus strain 145SL polyprotein gene, complete cds.
Evidence Literature
   Reference PMID: 12163611
      Authors Johansson S, Niklasson B, Maizel J, Gorbalenya AE, Lindberg AM
      Title Molecular analysis of three Ljungan virus isolates reveals a new, close-to-root lineage of the Picornaviridae with a cluster of two unrelated 2A proteins.
      Journal J Virol. 2002 Sep;76(17):8920-30.
   Comment Culture cell line: A-549 (Human lung tumor cells‎) and Vero (African green monkey kidney cells)
Evidence Literature
   Reference PMID: 10049824
      Authors Niklasson B, Kinnunen L, Hörnfeldt B, Hörling J, Benemar C, Hedlund KO, Matskova L, Hyypiä T, Winberg G
      Title A new picornavirus isolated from bank voles (Clethrionomys glareolus).
      Journal Virology. 1999 Mar 1;255(1):86-93.
   Comment Culture cell line: A-549 (Human lung tumor cells‎) and Vero (African green monkey kidney cells)
DBLINKS
ViralZone:  

Scientific NameLjungan virus 174F [TAX:172316]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Parechovirus; Parechovirus B; Ljunganvirus 1
GenBank
Ljungan virus strain 174F polyprotein gene, complete cds.
Evidence Literature
   Reference PMID: 12163611
      Authors Johansson S, Niklasson B, Maizel J, Gorbalenya AE, Lindberg AM
      Title Molecular analysis of three Ljungan virus isolates reveals a new, close-to-root lineage of the Picornaviridae with a cluster of two unrelated 2A proteins.
      Journal J Virol. 2002 Sep;76(17):8920-30.
   Comment Culture cell line: A-549 (Human lung tumor cells‎) and Vero (African green monkey kidney cells)
Evidence Literature
   Reference PMID: 10049824
      Authors Niklasson B, Kinnunen L, Hörnfeldt B, Hörling J, Benemar C, Hedlund KO, Matskova L, Hyypiä T, Winberg G
      Title A new picornavirus isolated from bank voles (Clethrionomys glareolus).
      Journal Virology. 1999 Mar 1;255(1):86-93.
   Comment Culture cell line: A-549 (Human lung tumor cells‎) and Vero (African green monkey kidney cells)
DBLINKS
ViralZone:  

Scientific NameLjunganvirus 1 [TAX:1001061]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Paavivirinae; Parechovirus; Parechovirus B
GenBank
Ljunganvirus 1 strain 87-012 polyprotein gene, complete cds.
Evidence Literature
   Reference PMID: 10049824
      Authors Niklasson B, Kinnunen L, Hörnfeldt B, Hörling J, Benemar C, Hedlund KO, Matskova L, Hyypiä T, Winberg G
      Title A new picornavirus isolated from bank voles (Clethrionomys glareolus).
      Journal Virology. 1999 Mar 1;255(1):86-93.
   Comment Culture cell line: Vero (African green monkey kidney cells)
Evidence Literature
   Reference PMID: 12163611
      Authors Johansson S, Niklasson B, Maizel J, Gorbalenya AE, Lindberg AM
      Title Molecular analysis of three Ljungan virus isolates reveals a new, close-to-root lineage of the Picornaviridae with a cluster of two unrelated 2A proteins.
      Journal J Virol. 2002 Sep;76(17):8920-30.
   Comment Culture cell line: Vero (African green monkey kidney cells)
DBLINKS
ViralZone:  

Scientific NameLone Star virus [TAX:1219465]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Bandavirus; Bandavirus amblyommae; Lone Star bandavirus
RefSeq
Lone Star virus isolate TMA 1381 segment L, complete sequence.
Lone Star virus isolate TMA 1381 segment M, complete sequence.
Lone Star virus isolate TMA 1381 segment S, complete sequence.
Evidence Literature
   Reference PMID: 23637969
      Authors Swei A, Russell BJ, Naccache SN, Kabre B, Veeraraghavan N, Pilgard MA, Johnson BJ, Chiu CY
      Title The genome sequence of Lone Star virus, a highly divergent bunyavirus found in the Amblyomma americanum tick.
      Journal PLoS One. 2013;8(4):e62083.
   Comment Culture cell line:Vero cells, Help
DBLINKS
ViralZone:  

Scientific NameM'Poko virus [TAX:442712]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus mpokoense
RefSeq
M'Poko virus segment S, complete sequence, strain ArB365.
Evidence Literature
   Reference PMID: 17485537
      Authors Yandoko EN, Gribaldo S, Finance C, Le Faou A, Rihn BH
      Title Molecular characterization of African orthobunyaviruses.
      Journal J Gen Virol. 2007 Jun;88(Pt 6):1761-6.
   Comment Culture cell line: Vero E6 cells
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameMahlapitsi orthoreovirus [TAX:2170064]
LineageViruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Spinareoviridae; Orthoreovirus
RefSeq
Mahlapitsi virus isolate 2511 segment L2, complete sequence.
Mahlapitsi virus isolate 2511 segment L3, complete sequence.
Mahlapitsi virus isolate 2511 segment M1, complete sequence.
Mahlapitsi virus isolate 2511 segment M3, complete sequence.
Mahlapitsi virus isolate 2511 segment S1, complete sequence.
Mahlapitsi virus isolate 2511 segment S3, complete sequence.
Mahlapitsi virus isolate 2511 segment L1, complete sequence.
Mahlapitsi virus isolate 2511 segment M2, complete sequence.
Mahlapitsi virus isolate 2511 segment S2, complete sequence.
Mahlapitsi virus isolate 2511 segment S4, complete sequence.
Evidence Literature
   Reference PMID: 27011199
      Authors Jansen van Vuren P, Wiley M, Palacios G, Storm N, McCulloch S, Markotter W, Birkhead M, Kemp A, Paweska JT
      Title Isolation of a Novel Fusogenic Orthoreovirus from Eucampsipoda africana Bat Flies in South Africa.
      Journal Viruses. 2016 Feb 29;8(3):65.
   Comment Culture cell line: Vero E6, C6-36
DBLINKS
ICTV:  
ViralZone:  

Scientific NameMammalian orthoreovirus 3 [TAX:538123]
LineageViruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Spinareoviridae; Orthoreovirus; Mammalian orthoreovirus
RefSeq
Mammalian orthoreovirus 3 segment L1, complete genome.
Mammalian orthoreovirus 3 segment L2, complete genome.
Mammalian orthoreovirus 3 segment M1, complete genome.
Mammalian orthoreovirus 3 segment M2, complete genome.
Mammalian orthoreovirus 3 segment L3, complete genome.
Mammalian orthoreovirus 3 segment M3, complete genome.
Mammalian orthoreovirus 3 segment S1, complete genome.
Mammalian orthoreovirus 3 segment S2, complete genome.
Mammalian orthoreovirus 3 segment S3, complete genome.
Mammalian orthoreovirus 3 segment S4, complete genome.
Evidence Literature
   Reference PMID: 26325682
      Authors Li Z, Shao Y, Liu C, Liu D, Guo D, Qiu Z, Tian J, Zhang X, Liu S, Qu L
      Title Isolation and pathogenicity of the mammalian orthoreovirus MPC/04 from masked civet cats.
      Journal Infect Genet Evol. 2015 Dec;36:55-61.
   Comment Culture cell line: Vero E6, BALB/c mice
DBLINKS
ViralZone:  

Scientific NameMammarenavirus cupixiense [TAX:3052304]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus
RefSeq
Cupixi virus segment L, complete sequence.
Cupixi virus segment S, complete sequence.
Evidence Literature
   Reference PMID: 12207889
      Authors Charrel RN, Feldmann H, Fulhorst CF, Khelifa R, de Chesse R, de Lamballerie X
      Title Phylogeny of New World arenaviruses based on the complete coding sequences of the small genomic segment identified an evolutionary lineage produced by intrasegmental recombination.
      Journal Biochem Biophys Res Commun. 2002 Sep 6;296(5):1118-24.
   Comment Culture cell line: Vero cells
Evidence Literature
   Reference PMID: 14698659
      Authors Charrel RN, Lemasson JJ, Garbutt M, Khelifa R, De Micco P, Feldmann H, de Lamballerie X
      Title New insights into the evolutionary relationships between arenaviruses provided by comparative analysis of small and large segment sequences.
      Journal Virology. 2003 Dec 20;317(2):191-6.
   Comment Culture cell line: Vero cells
DBLINKS
KEGG BRITE:  
ICTV:  
ViralZone:  

Scientific NameMammarenavirus machupoense [TAX:3052317]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus
RefSeq
Machupo virus segment S, complete genome.
Machupo virus segment L, complete genome.
DISEASE
H01542  
Bolivian hemorrhagic fever
Evidence UniProt
DBLINKS
KEGG BRITE:  
KEGG GENOME:  
ICTV:  
ViralZone:  

Scientific NameMammarenavirus whitewaterense [TAX:3052331]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus
RefSeq
Whitewater Arroyo virus segment S, complete sequence.
Evidence Literature
   Reference PMID: 11336541
      Authors Charrel RN, de Lamballerie X, Fulhorst CF
      Title The Whitewater Arroyo virus: natural evidence for genetic recombination among Tacaribe serocomplex viruses (family Arenaviridae).
      Journal Virology. 2001 May 10;283(2):161-6.
   Comment Culture cell line: Vero E6
DBLINKS
KEGG BRITE:  
ICTV:  
ViralZone:  

Scientific NameMaporal virus [TAX:238817]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Hantaviridae; Mammantavirinae; Orthohantavirus; Orthohantavirus maporalense
RefSeq
Maporal virus strain HV-97021050 segment M, complete sequence.
Maporal virus strain HV 97021050 segment L, complete sequence.
Maporal virus segment S nucleocapsid protein gene, complete cds.
Evidence Literature
   Reference PMID: 15246651
      Authors Fulhorst CF, Cajimat MN, Utrera A, Milazzo ML, Duno GM
      Title Maporal virus, a hantavirus associated with the fulvous pygmy rice rat (Oligoryzomys fulvescens) in western Venezuela.
      Journal Virus Res. 2004 Sep 1;104(2):139-44.
   Comment Culture cell line: Vero E6 cells
DBLINKS
ViralZone:  

Scientific NameMarburg virus - Musoke, Kenya, 1980 [TAX:33727]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Filoviridae; Orthomarburgvirus; Orthomarburgvirus marburgense
GenBank
Lake Victoria marburgvirus - Musoke from Kenya, complete genome.
Z12132  
Marburg virus - Musoke, Kenya, 1980 genes for vp35, vp40, vp30, vp24, glycoprotein, nucleoprotein, polymerase.
Evidence UniProt
Evidence Literature
   Reference PMID: 16379005
      Authors Enterlein S, Volchkov V, Weik M, Kolesnikova L, Volchkova V, Klenk HD, Mühlberger E
      Title Rescue of recombinant Marburg virus from cDNA is dependent on nucleocapsid protein VP30.
      Journal J Virol. 2006 Jan;80(2):1038-43.
   Comment Culture cell line: BSR T7/5, Vero cells
DBLINKS
ViralZone:  

Scientific NameMedjerda Valley virus [TAX:1775957]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus medjerdaense
RefSeq
Medjerda Valley virus strain T131 segment S, complete sequence.
Medjerda Valley virus strain T131 segment M, complete sequence.
Medjerda Valley virus strain T131 segment L, complete sequence.
Evidence Literature
   Reference PMID: 26704069
      Authors Bichaud L, Dachraoui K, Alwassouf S, Alkan C, Mensi M, Piorkowski G, Sakhria S, Seston M, Fares W, De Lamballerie X, Zhioua E, Charrel RN
      Title Isolation, full genomic characterization and neutralization-based human seroprevalence of Medjerda Valley virus, a novel sandfly-borne phlebovirus belonging to the Salehabad virus complex in northern Tunisia.
      Journal J Gen Virol. 2016 Mar;97(3):602-610.
   Comment Culture cell line: Vero cells
Culture cell line:Vero cells
DBLINKS
ViralZone:  

Scientific NameMelao virus [TAX:35515]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus melajoense
RefSeq
Melao virus strain TRVL 9375 segment M, complete sequence.
Melao virus strain TRVL 9375 segment L, complete sequence.
Melao virus strain TRVL 9375 segment S, complete sequence.
Evidence Literature
   Reference PMID: 34133422
      Authors Elbadry MA, Durães-Carvalho R, Blohm GM, Stephenson CJ, Loeb JC, White SK, Telisma T, Chavannes S, Beau De Rochars VM, Salemi M, Morris JG Jr, Lednicky JA
      Title Orthobunyaviruses in the Caribbean: Melao and Oropouche virus infections in school children in Haiti in 2014.
      Journal PLoS Negl Trop Dis. 2021 Jun;15(6):e0009494.
   Comment Culture cell line: Vero E6
DBLINKS
ViralZone:  

Scientific NameMogiana tick virus [TAX:1172985]
LineageViruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; unclassified Flaviviridae; Jingmenvirus group
RefSeq
Mogiana tick virus isolate MGTV/V4/11 segment 1, complete sequence.
Mogiana tick virus isolate MGTV/V4/11 segment 3, complete sequence.
Mogiana tick virus isolate MGTV/V4/11 VP2-3 gene, complete cds.
Mogiana tick virus isolate MGTV/V4/11 putative glycoprotein gene, complete cds.
Evidence Literature
   Reference PMID: 24626302
      Authors Maruyama SR, Castro-Jorge LA, Ribeiro JM, Gardinassi LG, Garcia GR, Brandão LG, Rodrigues AR, Okada MI, Abrão EP, Ferreira BR, Fonseca BA, Miranda-Santos IK
      Title Characterisation of divergent flavivirus NS3 and NS5 protein sequences detected in Rhipicephalus microplus ticks from Brazil.
      Journal Mem Inst Oswaldo Cruz. 2014 Feb;109(1):38-50.
   Comment Culture cell line: Vero cell and BHK21
Culture cell line: Vero cells(Chlorocebus aethiops)
DBLINKS
ViralZone:  

Scientific NameMopeia Lassa virus reassortant 29 [TAX:300180]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Arenaviridae; unclassified Arenaviridae; Arenavirus; Old world arenaviruses; unclassified Old world arenaviruses
RefSeq
Mopeia Lassa reassortant 29 segment L, complete genome.
Mopeia Lassa reassortant 29 segment S, complete genome.
Evidence RefSeq
Evidence Literature
   Reference PMID: 16254329
      Authors Lukashevich IS, Patterson J, Carrion R, Moshkoff D, Ticer A, Zapata J, Brasky K, Geiger R, Hubbard GB, Bryant J, Salvato MS
      Title A live attenuated vaccine for Lassa fever made by reassortment of Lassa and Mopeia viruses.
      Journal J Virol. 2005 Nov;79(22):13934-42.
   Comment Culture cell line: Vero E6 cells
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameMosso das Pedras virus [TAX:2083199]
LineageViruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus
RefSeq
Mosso das Pedras virus, complete sequence.
Evidence Literature
   Reference PMID: 14680121
      Authors Fernández Z, Moncayo AC, Carrara AS, Forattini OP, Weaver SC
      Title Vector competence of rural and urban strains of Aedes (Stegomyia) albopictus (Diptera: Culicidae) from São Paulo State, Brazil for IC, ID, and IF subtypes of Venezuelan equine encephalitis virus.
      Journal J Med Entomol. 2003 Jul;40(4):522-7.
   Comment Culture cell line: Vero cells, Pekin duck embryo cell monolayers, baby hamster kidney-21 cells
Evidence Literature
   Reference PMID: 9886206
      Authors Kinney RM, Pfeffer M, Tsuchiya KR, Chang GJ, Roehrig JT
      Title Nucleotide sequences of the 26S mRNAs of the viruses defining the Venezuelan equine encephalitis antigenic complex.
      Journal Am J Trop Med Hyg. 1998 Dec;59(6):952-64.
   Comment Culture cell line: Vero cells, Pekin duck embryo cell monolayers, baby hamster kidney-21 cells
DBLINKS
KEGG BRITE:  
ICTV:  
ViralZone:  

Scientific NameMukawa virus [TAX:1569922]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus mukawaense
RefSeq
Mukawa virus cRNA, segment M, complete sequence, isolate: MKW73.
Mukawa virus cRNA, segment L, complete sequence, isolate: MKW73.
Mukawa virus cRNA, segment S, complete sequence, isolate: MKW73.
Evidence Literature
   Reference PMID: 29898985
      Authors Matsuno K, Kajihara M, Nakao R, Nao N, Mori-Kajihara A, Muramatsu M, Qiu Y, Torii S, Igarashi M, Kasajima N, Mizuma K, Yoshii K, Sawa H, Sugimoto C, Takada A, Ebihara H
      Title The Unique Phylogenetic Position of a Novel Tick-Borne Phlebovirus Ensures an Ixodid Origin of the Genus <i>Phlebovirus</i>.
      Journal mSphere. 2018 Jun 27;3(3).
   Comment Culture cell line: Vero E6 cells,DH82 cells,Huh7 cells, and ISE6 cells
DBLINKS
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Scientific NameMurmansk poxvirus [TAX:2025359]
LineageViruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Centapoxvirus; Murmansk microtuspox virus
RefSeq
Murmansk poxvirus strain LEIV-11411, complete genome.
Evidence Literature
   Reference PMID: 28762208
      Authors Smithson C, Meyer H, Gigante CM, Gao J, Zhao H, Batra D, Damon I, Upton C, Li Y
      Title Two novel poxviruses with unusual genome rearrangements: NY_014 and Murmansk.
      Journal Virus Genes. 2017 Dec;53(6):883-897.
   Comment Culture cell line: Vero cells
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameMyotis gammaherpesvirus 8 [TAX:1780507]
LineageViruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Orthoherpesviridae; Gammaherpesvirinae; unclassified Gammaherpesvirinae
RefSeq
Myotis gammaherpesvirus 8 strain My-HV8/Myotis velifer incautus/USA/FCGHV/2011, partial genome.
Evidence Literature
   Reference PMID: 27303690
      Authors Host KM, Damania B
      Title Discovery of a Novel Bat Gammaherpesvirus.
      Journal mSphere. 2016 Jan-Feb;1(1).
   Comment Culture cell line: Vero cells, The human cell lines A549 and Huh7
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameNess Ziona virus [TAX:2544873]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; unclassified Orthobunyavirus
RefSeq
Ness Ziona virus isolate H234A segment M, complete sequence.
Ness Ziona virus isolate H234A segment L, complete sequence.
Ness Ziona virus isolate H234A segment S, complete sequence.
Evidence Literature
   Reference PMID: 30833612
      Authors Shifman O, Cohen-Gihon I, Beth-Din A, Zvi A, Laskar O, Paran N, Epstein E, Stein D, Dorozko M, Wolf D, Yitzhaki S, Shapira SC, Melamed S, Israeli O
      Title Identification and genetic characterization of a novel Orthobunyavirus species by a straightforward high-throughput sequencing-based approach.
      Journal Sci Rep. 2019 Mar 4;9(1):3398.
   Comment Culture cell line:Vero cells
DBLINKS
ViralZone:  

Scientific NameNgewotan negevirus [TAX:2713662]
LineageViruses; Riboviria; unclassified Riboviria; unclassified ssRNA viruses; unclassified ssRNA positive-strand viruses; Negevirus; unclassified Negevirus
GenBank
Ngewotan negevirus isolate JKT9982, complete genome.
Evidence Literature
   Reference PMID: 23255793
      Authors Vasilakis N, Forrester NL, Palacios G, Nasar F, Savji N, Rossi SL, Guzman H, Wood TG, Popov V, Gorchakov R, González AV, Haddow AD, Watts DM, da Rosa AP, Weaver SC, Lipkin WI, Tesh RB
      Title Negevirus: a proposed new taxon of insect-specific viruses with wide geographic distribution.
      Journal J Virol. 2013 Mar;87(5):2475-88.
   Comment Culture cell line: Vero cells

Scientific NameNova virus [TAX:660955]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Hantaviridae; Mammantavirinae; Mobatvirus; Mobatvirus novaense
RefSeq
Nova virus strain Te34 nucleocapsid gene, complete cds.
Nova virus strain Te34 RNA-dependent RNA polymerase gene, complete cds.
Nova virus strain Te34 glycoprotein gene, complete cds.
Evidence Literature
   Reference PMID: 26021917
      Authors Gu SH, Hejduk J, Markowski J, Markowski M, Liberski PP, Yanagihara R
      Title Whole-Genome Sequence of a Novel Hantavirus Isolated from the European Mole (Talpa europaea).
      Journal Genome Announc. 2015 May 28;3(3).
   Comment culture cell line:VERO E6
DBLINKS
ViralZone:  

Scientific NameNtepes virus [TAX:2569589]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus ntepesense
RefSeq
Ntepes virus strain MRG54-KE-2014 segment S, complete sequence.
Ntepes virus strain MRG54-KE-2014 segment M, complete sequence.
Ntepes virus strain MRG54-KE-2014 segment L, complete sequence.
Evidence Literature
   Reference PMID: 30882303
      Authors Tchouassi DP, Marklewitz M, Chepkorir E, Zirkel F, Agha SB, Tigoi CC, Koskei E, Drosten C, Borgemeister C, Torto B, Junglen S, Sang R
      Title Sand Fly-Associated Phlebovirus with Evidence of Neutralizing Antibodies in Humans, Kenya.
      Journal Emerg Infect Dis. 2019 Apr;25(4):681-690.
   Comment Culture cell line:VeroE6/7 cells
DBLINKS
ViralZone:  

Scientific NameOrthobunyavirus bwambaense [TAX:3052384]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus
RefSeq
Bwamba virus strain M459 segment L polymerase gene, complete cds.
Bwamba virus strain M459 segment S nucleoprotein and nonstructural protein NSs genes, complete cds.
Bwamba virus strain M459 segment M glycoprotein precursor gene, complete cds.
Evidence Literature
   Reference PMID: 25188437
      Authors Groseth A, Mampilli V, Weisend C, Dahlstrom E, Porcella SF, Russell BJ, Tesh RB, Ebihara H
      Title Molecular characterization of human pathogenic bunyaviruses of the Nyando and Bwamba/Pongola virus groups leads to the genetic identification of Mojuí dos Campos and Kaeng Khoi virus.
      Journal PLoS Negl Trop Dis. 2014 Sep;8(9):e3147.
   Comment Culture cell line: Vero E6.
DBLINKS
ICTV:  
ViralZone:  

Scientific NameOrthohantavirus andesense [TAX:1980456]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Hantaviridae; Mammantavirinae; Orthohantavirus
RefSeq
Andes virus segment S, complete sequence.
Andes virus segment M, complete genome.
Andes virus segment L, complete genome.
DISEASE
H00390  
Hantavirus pulmonary syndrome
Evidence Literature
   Reference PMID: 12367756
      Authors Meissner JD, Rowe JE, Borucki MK, St Jeor SC
      Title Complete nucleotide sequence of a Chilean hantavirus.
      Journal Virus Res. 2002 Oct;89(1):131-43.
   Comment Culture cell line: Vero E6 cells
DBLINKS
KEGG GENOME:  
ICTV:  
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Scientific NameOrthohantavirus dobravaense [TAX:3052477]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Hantaviridae; Mammantavirinae; Orthohantavirus
RefSeq
Dobrava virus complete S segment gene for nucleocapsid protein, strain DOBV/Ano-Poroia/Afl9/1999.
Dobrava virus complete M segment gene for glycoprotein precursor (G1-G2), strain DOBV/Ano-Poroia/Afl9/1999).
Dobrava virus complete L segment gene for polymerase protein, strain DOBV/Ano-Poroia/Afl9/1999).
DISEASE
H00389  
Hemorrhagic fever with renal syndrome
Evidence Literature
   Reference PMID: 12526053
      Authors Nemirov K, Vapalahti O, Papa A, Plyusnina A, Lundkvist A, Antoniadis A, Vaheri A, Plyusnin A
      Title Genetic characterization of new Dobrava hantavirus isolate from Greece.
      Journal J Med Virol. 2003 Mar;69(3):408-16.
   Comment Culture cell line:Vero E6 cell
DBLINKS
KEGG GENOME:  
ICTV:  
ViralZone:  

Scientific NameOrthohantavirus puumalaense [TAX:3052493]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Hantaviridae; Mammantavirinae; Orthohantavirus
RefSeq
Puumala virus segment M, complete sequence.
Puumala virus segment S, complete sequence.
DISEASE
H00389  
Hemorrhagic fever with renal syndrome
Evidence Literature
   Reference PMID: 1353107
      Authors Vapalahti O, Kallio-Kokko H, Salonen EM, Brummer-Korvenkontio M, Vaheri A
      Title Cloning and sequencing of Puumala virus Sotkamo strain S and M RNA segments: evidence for strain variation in hantaviruses and expression of the nucleocapsid protein.
      Journal J Gen Virol. 1992 Apr;73 ( Pt 4):829-38.
   Comment Culture cell line: Vero E6
DBLINKS
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KEGG GENOME:  
ICTV:  
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Scientific NameOrthohantavirus seoulense [TAX:3052498]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Hantaviridae; Mammantavirinae; Orthohantavirus
RefSeq
Seoul virus strain 80-39 segment S, complete sequence.
Seoul virus segment M, complete sequence.
Seoul virus strain Seoul 80-39 clone 1.
DISEASE
H00389  
Hemorrhagic fever with renal syndrome
Evidence Literature
   Reference PMID: 1867009
      Authors Antic D, Lim BU, Kang CY
      Title Molecular characterization of the M genomic segment of the Seoul 80-39 virus; nucleotide and amino acid sequence comparisons with other hantaviruses reveal the evolutionary pathway.
      Journal Virus Res. 1991 Mar;19(1):47-58.
   Comment Culture cell line: Vero E6 cells
Culture cell line: Vero E6 cells
Evidence Literature
   Reference PMID: 15744561
      Authors Schmidt J, Jandrig B, Klempa B, Yoshimatsu K, Arikawa J, Meisel H, Niedrig M, Pitra C, Krüger DH, Ulrich R
      Title Nucleocapsid protein of cell culture-adapted Seoul virus strain 80-39: analysis of its encoding sequence, expression in yeast and immuno-reactivity.
      Journal Virus Genes. 2005 Jan;30(1):37-48.
   Comment Culture cell line: Vero E6 cells
Culture cell line: Vero E6 cells
DBLINKS
KEGG GENOME:  
ICTV:  
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Scientific NameOrthohantavirus tulaense [TAX:3052503]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Hantaviridae; Mammantavirinae; Orthohantavirus
RefSeq
Tula virus segment L, complete sequence.
Tula virus segment S, complete genome.
Tula virus segment M, complete sequence.
DISEASE
H00389  
Hemorrhagic fever with renal syndrome
Evidence Literature
   Reference PMID: 9820136
      Authors Kukkonen SK, Vaheri A, Plyusnin A
      Title Completion of the Tula hantavirus genome sequence: properties of the L segment and heterogeneity found in the 3' termini of S and L genome RNAs.
      Journal J Gen Virol. 1998 Nov;79 ( Pt 11):2615-22.
   Comment Culture cell line: Vero E6
DBLINKS
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Scientific NameOrthomarburgvirus marburgense [TAX:3052505]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Filoviridae; Orthomarburgvirus
RefSeq
Marburg marburgvirus isolate Marburg virus/H.sapiens-tc/KEN/1980/Mt. Elgon-Musoke, complete genome.
Marburg marburgvirus isolate Ravn virus/H.sapiens-tc/KEN/1987/Kitum Cave-810040, complete genome.
DISEASE
H00405  
Marburg disease; Marburg hemorrhagic fever
Evidence UniProt
DBLINKS
KEGG BRITE:  
KEGG GENOME:  
ICTV:  
ViralZone:  

Scientific NameOrthonairovirus thiaforaense [TAX:3052537]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Nairoviridae; Orthonairovirus
RefSeq
Thiafora virus isolate AnD 11411 RNA-dependent RNA polymerase gene, complete cds.
Thiafora virus isolate AnD 11411 envelope glycoprotein gene, complete cds.
Thiafora virus isolate AnD 11411 nucleoprotein gene, complete cds.
Evidence Literature
   Reference PMID: 26324724
      Authors Walker PJ, Widen SG, Firth C, Blasdell KR, Wood TG, Travassos da Rosa AP, Guzman H, Tesh RB, Vasilakis N
      Title Genomic Characterization of Yogue, Kasokero, Issyk-Kul, Keterah, Gossas, and Thiafora Viruses: Nairoviruses Naturally Infecting Bats, Shrews, and Ticks.
      Journal Am J Trop Med Hyg. 2015 Nov;93(5):1041-51.
   Comment Culture cell line: Vero cell
Evidence Other
   Comment Culture cell line: Vero cell
DBLINKS
ICTV:  
ViralZone:  

Scientific NameOrungo virus [TAX:40058]
LineageViruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus
RefSeq
Orungo virus isolate UGMP 359 segment 1, complete sequence.
Orungo virus isolate UGMP 359 segment 2, complete sequence.
Orungo virus isolate UGMP 359 segment 4, complete sequence.
Orungo virus isolate UGMP 359 segment 7, complete sequence.
Orungo virus isolate UGMP 359 segment 8, complete sequence.
Orungo virus isolate UGMP 359 segment 6, complete sequence.
Orungo virus isolate UGMP 359 segment 3, complete sequence.
Orungo virus isolate UGMP 359 segment 5, complete sequence.
Orungo virus isolate UGMP 359 segment 9, complete sequence.
Orungo virus isolate UGMP 359 segment 10, complete sequence.
Evidence Literature
   Reference First Identification of Orungo Virus (Orbivirus) from a Febrile Patient in South-Eastern Senegal, 2015
First Identification of Orungo Virus (Orbivirus) from a Febrile Patient in South-Eastern Senegal, 2015
DBLINKS
ICTV:  
ViralZone:  

Scientific NameOz virus [TAX:2137161]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Thogotovirus; Thogotovirus ozense
RefSeq
Oz virus viral cRNA, segment 1, complete sequence, strain: EH8.
Oz virus viral cRNA, segment 2, complete sequence, strain: EH8.
Oz virus viral cRNA, segment 3, complete sequence, strain: EH8.
Oz virus viral cRNA, segment 5, complete sequence, strain: EH8.
Oz virus viral cRNA, segment 6, complete sequence, strain: EH8.
Oz virus viral cRNA, segment 4, complete sequence, strain: EH8.
Evidence Literature
   Reference PMID: 29548745
      Authors Ejiri H, Lim CK, Isawa H, Fujita R, Murota K, Sato T, Kobayashi D, Kan M, Hattori M, Kimura T, Yamaguchi Y, Takayama-Ito M, Horiya M, Posadas-Herrera G, Minami S, Kuwata R, Shimoda H, Maeda K, Katayama Y, Mizutani T, Saijo M, Kaku K, Shinomiya H, Sawabe K
      Title Characterization of a novel thogotovirus isolated from Amblyomma testudinarium ticks in Ehime, Japan: A significant phylogenetic relationship to Bourbon virus.
      Journal Virus Res. 2018 Apr 2;249:57-65.
   Comment Culture cell line: Vero, BHK-21 and DH82
DBLINKS
ViralZone:  

Scientific NameParainfluenza virus 5 [TAX:2905673]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Rubulavirinae; Orthorubulavirus; Orthorubulavirus mammalis; Mammalian orthorubulavirus 5
RefSeq
Parainfluenza virus 5 strain W3A.
Evidence Literature
   Reference PMID: 23807746
      Authors Lee YN, Lee C
      Title Complete genome sequence of a novel porcine parainfluenza virus 5 isolate in Korea.
      Journal Arch Virol. 2013 Aug;158(8):1765-72.
   Comment Culture cell line: Vero cells
Evidence Literature
   Reference PMID: 31450796
      Authors Feehan BJ, Penin AA, Mukhin AN, Kumar D, Moskvina AS, Khametova KM, Yuzhakov AG, Musienko MI, Zaberezhny AD, Aliper TI, Marthaler D, Alekseev KP
      Title Novel <i>Mammalian orthorubulavirus 5</i> Discovered as Accidental Cell Culture Contaminant.
      Journal Viruses. 2019 Aug 23;11(9).
   Comment Culture cell line: Vero cells
Evidence Literature
   Reference PMID: 26583313
      Authors Liu Y, Li N, Zhang S, Zhang F, Lian H, Hu R
      Title Parainfluenza Virus 5 as Possible Cause of Severe Respiratory Disease in Calves, China.
      Journal Emerg Infect Dis. 2015 Dec;21(12):2242-4.
   Comment Culture cell line: Vero cells
Evidence Literature
   Reference PMID: 28138777
      Authors Zhai JQ, Zhai SL, Lin T, Liu JK, Wang HX, Li B, Zhang H, Zou SZ, Zhou X, Wu MF, Chen W, Luo ML
      Title First complete genome sequence of parainfluenza virus 5 isolated from lesser panda.
      Journal Arch Virol. 2017 May;162(5):1413-1418.
   Comment Culture cell line: Vero cells
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NamePaslahepevirus balayani [TAX:1678143]
LineageViruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Hepelivirales; Hepeviridae; Orthohepevirinae; Paslahepevirus
RefSeq
Paslahepevirus balayani nonstructural protein and structural viral protein genes, complete cds.
Paslahepevirus balayani isolate AlgSwe2012, partial genome.
Paslahepevirus balayani isolate little egret/kocsag02/2014/HUN, complete genome.
DISEASE
H00415  
Hepatitis E; Hepatitis E virus (HEV) infection
Evidence UniProt
DBLINKS
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ICTV:  
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Scientific NamePerkerra virus [TAX:2767010]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus perkerraense
RefSeq
Perkerra virus strain SP166-KE-2016 segment L, complete sequence.
Perkerra virus strain SP166-KE-2016 segment S, complete sequence.
Perkerra virus strain SP166-KE-2016 segment M, complete sequence.
Evidence Literature
   Reference PMID: 32878929
      Authors Marklewitz M, Tchouassi DP, Hieke C, Heyde V, Torto B, Sang R, Junglen S
      Title Insights into the Evolutionary Origin of Mediterranean Sandfly Fever Viruses.
      Journal mSphere. 2020 Sep 2;5(5).
   Comment Culture cell line:VeroE6, C6/36, LLC-MK2, LL-5, PP-9 and BHK-21
DBLINKS
ViralZone:  

Scientific NamePorcine epidemic diarrhea virus L00721/GER/2014 [TAX:1525377]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus; Porcine epidemic diarrhea virus
GenBank
Porcine epidemic diarrhea virus L00721/GER/2014, complete genome.
Evidence Literature
   Reference PMID: 25695311
      Authors Hanke D, Jenckel M, Petrov A, Ritzmann M, Stadler J, Akimkin V, Blome S, Pohlmann A, Schirrmeier H, Beer M, Höper D
      Title Comparison of porcine epidemic diarrhea viruses from Germany and the United States, 2014.
      Journal Emerg Infect Dis. 2015 Mar;21(3):493-6.
   Comment Culture cell line: PK-15 (Porcine Kidney cells) and Vero (African green monkey kidney cells)
DBLINKS
ViralZone:  

Scientific NamePrimate T-lymphotropic virus 1 [TAX:194440]
LineageViruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Deltaretrovirus
RefSeq
Primate T-lymphotropic virus 1, complete genome.
Evidence Literature
   Reference PMID: 8390757
      Authors Saksena NK, Hervé V, Sherman MP, Durand JP, Mathiot C, Müller M, Love JL, LeGuenno B, Sinoussi FB, Dube DK
      Title Sequence and phylogenetic analyses of a new STLV-I from a naturally infected tantalus monkey from Central Africa.
      Journal Virology. 1993 Jan;192(1):312-20.
DBLINKS
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Scientific NamePRRSV LV4.2.1 [TAX:288959]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Arnidovirineae; Arteriviridae; Variarterivirinae; Betaarterivirus; Eurpobartevirus; Betaarterivirus suid 1; Porcine reproductive and respiratory syndrome virus 1; Lelystad virus
GenBank
PRRSV LV4.2.1, complete genome.
Evidence Literature
   Reference PMID: 16160177
      Authors Wissink EH, Kroese MV, van Wijk HA, Rijsewijk FA, Meulenberg JJ, Rottier PJ
      Title Envelope protein requirements for the assembly of infectious virions of porcine reproductive and respiratory syndrome virus.
      Journal J Virol. 2005 Oct;79(19):12495-506.
   Comment Culture cell line: MARC-145 (Monkey kidney)
DBLINKS
ViralZone:  

Scientific NamePulau reovirus [TAX:253454]
LineageViruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Spinareoviridae; Orthoreovirus; Nelson Bay orthoreovirus
RefSeq
Pulau reovirus segment S4, complete sequence.
Pulau reovirus segment S2, complete sequence.
Pulau reovirus segment L2, complete sequence.
Pulau reovirus segment M1, complete sequence.
Pulau reovirus segment L3, complete sequence.
Pulau reovirus segment S3, complete sequence.
Pulau reovirus segment M2, complete sequence.
Pulau reovirus segment L1, complete sequence.
Pulau reovirus segment M3, complete sequence.
Pulau reovirus segment S1, complete sequence.
Evidence Literature
   Reference PMID: 16205863
      Authors Pritchard LI, Chua KB, Cummins D, Hyatt A, Crameri G, Eaton BT, Wang LF
      Title Pulau virus; a new member of the Nelson Bay orthoreovirus species isolated from fruit bats in Malaysia.
      Journal Arch Virol. 2006 Feb;151(2):229-39.
   Comment Culture cell line: vero cells
DBLINKS
ViralZone:  

Scientific NamePunique virus [TAX:693015]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus puniqueense
RefSeq
Punique virus strain PI-B4-2008 nucleoprotein and non-structural protein genes, complete cds.
Punique virus strain PI-B4-2008 polyprotein gene, complete cds.
Punique virus strain PI-B4-2008 polymerase gene, complete cds.
Evidence Literature
   Reference PMID: 20089800
      Authors Zhioua E, Moureau G, Chelbi I, Ninove L, Bichaud L, Derbali M, Champs M, Cherni S, Salez N, Cook S, de Lamballerie X, Charrel RN
      Title Punique virus, a novel phlebovirus, related to sandfly fever Naples virus, isolated from sandflies collected in Tunisia.
      Journal J Gen Virol. 2010 May;91(Pt 5):1275-83.
   Comment Culture cell line: vero cells
DBLINKS
ViralZone:  

Scientific NameQuaranjavirus quaranfilense [TAX:688436]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Quaranjavirus
RefSeq
Quaranfil virus isolate EG T 377 polymerase PB2 (PB2) gene, complete cds.
Quaranfil virus isolate EG T 377 polymerase PA (PA) gene, complete cds.
Quaranfil virus isolate EG T 377 hypothetical protein gene, complete cds.
Quaranfil virus isolate EG T 377 hemagglutinin (HA) gene, complete cds.
Quaranfil virus isolate EG T 377 polymerase PB1 (PB1) gene, complete cds.
Quaranfil virus isolate EG T 377 unknown gene.
Evidence Literature
   Reference PMID: 19726499
      Authors Presti RM, Zhao G, Beatty WL, Mihindukulasuriya KA, da Rosa AP, Popov VL, Tesh RB, Virgin HW, Wang D
      Title Quaranfil, Johnston Atoll, and Lake Chad viruses are novel members of the family Orthomyxoviridae.
      Journal J Virol. 2009 Nov;83(22):11599-606.
   Comment Culture cell line: vero cells, 3T12 cells
DBLINKS
ICTV:  
ViralZone:  

Scientific NameRavn virus - Ravn, Kenya, 1987 [TAX:378809]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Filoviridae; Orthomarburgvirus; Orthomarburgvirus marburgense
GenBank
Lake Victoria marburgvirus - Ravn, complete genome.
Evidence UniProt
DBLINKS
ViralZone:  

Scientific NameRio Grande virus [TAX:629740]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus riograndense
RefSeq
Rio Grande virus isolate TBM3-204 segment L, complete sequence.
Rio Grande virus isolate TBM3-204 segment S, complete sequence.
Rio Grande virus isolate TBM3-204 segment M, complete sequence.
Evidence Literature
   Reference PMID: 34578299
      Authors Szymczak MS, Reeves WK, Miller MM
      Title Further Characterization of Rio Grande Virus and Potential for Cross Reactivity with Rift Valley Fever Virus Assays.
      Journal Viruses. 2021 Aug 30;13(9).
   Comment Culture cell line: Vero 76
DBLINKS
ViralZone:  

Scientific NameRotavirus A [TAX:28875]
LineageViruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Rotavirus
RefSeq
Rotavirus A segment 5, complete genome.
Rotavirus A segment 7, complete genome.
Rotavirus A segment 8, complete genome.
Rotavirus A segment 9, complete genome.
Rotavirus A segment 10, complete genome.
Rotavirus A segment 11, complete genome.
Rotavirus A segment 2, complete genome.
Rotavirus A segment 1, complete genome.
Rotavirus A segment 3, complete genome.
Rotavirus A segment 6, complete genome.
Rotavirus A segment 4, complete genome.
DISEASE
H00975  
Rotaviral enteritis; Rotaviral gastroenteritis
H01430  
Viral gastroenteritis
Evidence Literature
   Reference PMID: 17059839
      Authors Small C, Barro M, Brown TL, Patton JT
      Title Genome heterogeneity of SA11 rotavirus due to reassortment with "O" agent.
      Journal Virology. 2007 Mar 15;359(2):415-24.
   Comment Culture cell line: bovine kidney cells, African green monkey kidney cells
Culture cell line: bovine kidney cells, African green monkey kidney cells,
DBLINKS
KEGG GENOME:  
ICTV:  
ViralZone:  

Scientific NameSalanga virus [TAX:1416745]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus salangaense
RefSeq
Salanga virus strain AnB 904a polymerase gene, complete cds.
Salanga virus strain AnB 904a polyprotein gene, complete cds.
Salanga virus strain AnB 904a nonstructural protein and nucleocapsid genes, complete cds.
Evidence Literature
   Reference PMID: 24167629
      Authors Zhao G, Krishnamurthy S, Cai Z, Popov VL, Travassos da Rosa AP, Guzman H, Cao S, Virgin HW, Tesh RB, Wang D
      Title Identification of novel viruses using VirusHunter--an automated data analysis pipeline.
      Journal PLoS One. 2013;8(10):e78470.
   Comment Culture cell line: Vero E6
DBLINKS
ViralZone:  

Scientific NameSan Miguel sea lion virus [TAX:11982]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Vesivirus; Vesicular exanthema of swine virus
GenBank
U15301  
San Miguel sea lion virus serotype 1, complete genome.
Evidence Literature
   Reference PMID: 7769708
      Authors Neill JD, Meyer RF, Seal BS
      Title Genetic relatedness of the caliciviruses: San Miguel sea lion and vesicular exanthema of swine viruses constitute a single genotype within the Caliciviridae.
      Journal J Virol. 1995 Jul;69(7):4484-8.
   Comment Culture cell line: Vero (African green monkey kidney cells)
DBLINKS
ViralZone:  

Scientific NameSan Miguel sea lion virus 8 [TAX:1564182]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Vesivirus; unclassified Vesivirus
RefSeq
San Miguel sea lion virus 8, complete genome.
Evidence Literature
   Reference PMID: 25502676
      Authors Neill JD
      Title The Complete Genome Sequence of the San Miguel Sea Lion Virus-8 Reveals that It Is Not a Member of the Vesicular Exanthema of Swine Virus/San Miguel Sea Lion Virus Species of the Caliciviridae.
      Journal Genome Announc. 2014 Dec 11;2(6).
   Comment Culture cell line: Vero cells
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameSARS coronavirus BJ01 [TAX:228407]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus
GenBank
SARS coronavirus BJ01, complete genome.
Evidence Literature
   Reference Zhu, Q., Yu, M., Fan, B., Chang, G., Si, B., Yang, B. A., ... & Liu, H. (2003). A complete sequence and comparative analysis of a SARS-associated virus (Isolate BJ01). Chinese Science Bulletin, 48(10), 941-948.
   Comment Culture cell line: Vero E6 (African green monkey kidney cells)
DBLINKS
ViralZone:  

Scientific NameSARS coronavirus ExoN1 [TAX:627440]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus; recombinant SARSr-CoV
GenBank
SARS coronavirus ExoN1 isolate P3pp46, complete genome.
Evidence Literature
   Reference PMID: 14569023
      Authors Yount B, Curtis KM, Fritz EA, Hensley LE, Jahrling PB, Prentice E, Denison MR, Geisbert TW, Baric RS
      Title Reverse genetics with a full-length infectious cDNA of severe acute respiratory syndrome coronavirus.
      Journal Proc Natl Acad Sci U S A. 2003 Oct 28;100(22):12995-3000.
   Comment Culture cell line: Vero E6 (African green monkey kidney cells)
Evidence Literature
   Reference PMID: 20463816
      Authors Eckerle LD, Becker MM, Halpin RA, Li K, Venter E, Lu X, Scherbakova S, Graham RL, Baric RS, Stockwell TB, Spiro DJ, Denison MR
      Title Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing.
      Journal PLoS Pathog. 2010 May 6;6(5):e1000896.
   Comment Culture cell line: Vero E6 (African green monkey kidney cells)
DBLINKS
ViralZone:  

Scientific NameSARS coronavirus MA15 [TAX:633137]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus; recombinant SARSr-CoV
GenBank
SARS coronavirus MA15 isolate P3pp6, complete genome.
Evidence Literature
   Reference PMID: 17222058
      Authors Roberts A, Deming D, Paddock CD, Cheng A, Yount B, Vogel L, Herman BD, Sheahan T, Heise M, Genrich GL, Zaki SR, Baric R, Subbarao K
      Title A mouse-adapted SARS-coronavirus causes disease and mortality in BALB/c mice.
      Journal PLoS Pathog. 2007 Jan;3(1):e5.
   Comment Culture cell line: Vero E6 (African green monkey kidney cells)
DBLINKS
ViralZone:  

Scientific NameSARS coronavirus MA15 ExoN1 [TAX:633140]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus; recombinant SARSr-CoV
GenBank
SARS coronavirus MA15 ExoN1 isolate P3pp5, complete genome.
Evidence Literature
   Reference PMID: 17222058
      Authors Roberts A, Deming D, Paddock CD, Cheng A, Yount B, Vogel L, Herman BD, Sheahan T, Heise M, Genrich GL, Zaki SR, Baric R, Subbarao K
      Title A mouse-adapted SARS-coronavirus causes disease and mortality in BALB/c mice.
      Journal PLoS Pathog. 2007 Jan;3(1):e5.
Eckerle, L. D., Becker, M. M., Halpin, R. A., Li, K., Venter, E., Lu, X., ... & Spiro, D. J. (2010). Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing. PLoS pathogens, 6(5), e1000896.
   Comment Culture cell line: Vero E6 (African green monkey kidney cells)
DBLINKS
ViralZone:  

Scientific NameSARS coronavirus Tor2 [TAX:227984]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus; Severe acute respiratory syndrome coronavirus
RefSeq
SARS coronavirus Tor2, complete genome.
DISEASE
H00402  
Severe acute respiratory syndrome; SARS
Evidence Literature
   Reference PMID: 15020242
      Authors He R, Dobie F, Ballantine M, Leeson A, Li Y, Bastien N, Cutts T, Andonov A, Cao J, Booth TF, Plummer FA, Tyler S, Baker L, Li X
      Title Analysis of multimerization of the SARS coronavirus nucleocapsid protein.
      Journal Biochem Biophys Res Commun. 2004 Apr 2;316(2):476-83.
   Comment Culture cell line: Vero cells
DBLINKS
KEGG BRITE:  
KEGG GENOME:  
ViralZone:  

Scientific NameSARS coronavirus Urbani [TAX:228330]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus
GenBank
SARS coronavirus Urbani, complete genome.
Evidence Literature
   Reference PMID: 12730500
      Authors Rota PA, Oberste MS, Monroe SS, Nix WA, Campagnoli R, Icenogle JP, Peñaranda S, Bankamp B, Maher K, Chen MH, Tong S, Tamin A, Lowe L, Frace M, DeRisi JL, Chen Q, Wang D, Erdman DD, Peret TC, Burns C, Ksiazek TG, Rollin PE, Sanchez A, Liffick S, Holloway B, Limor J, McCaustland K, Olsen-Rasmussen M, Fouchier R, Günther S, Osterhaus AD, Drosten C, Pallansch MA, Anderson LJ, Bellini WJ
      Title Characterization of a novel coronavirus associated with severe acute respiratory syndrome.
      Journal Science. 2003 May 30;300(5624):1394-9.
   Comment Culture cell line: Vero E6 (African green monkey kidney cells)
DBLINKS
ViralZone:  

Scientific NameSARS coronavirus WHU [TAX:247149]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus
GenBank
SARS coronavirus WHU, complete genome.
Evidence Literature
   Reference PMID: 15170624
      Authors Yan H, Xiao G, Zhang J, Hu Y, Yuan F, Cole DK, Zheng C, Gao GF
      Title SARS coronavirus induces apoptosis in Vero E6 cells.
      Journal J Med Virol. 2004 Jul;73(3):323-31.
   Comment Culture cell line: Vero E6 (African green monkey kidney cells)
Evidence Literature
   Reference PMID: 15744567
      Authors Zhu Y, Liu M, Zhao W, Zhang J, Zhang X, Wang K, Gu C, Wu K, Li Y, Zheng C, Xiao G, Yan H, Zhang J, Guo D, Tien P, Wu J
      Title Isolation of virus from a SARS patient and genome-wide analysis of genetic mutations related to pathogenesis and epidemiology from 47 SARS-CoV isolates.
      Journal Virus Genes. 2005 Jan;30(1):93-102.
   Comment Culture cell line: Vero E6 (African green monkey kidney cells)
DBLINKS
ViralZone:  

Scientific NameSARS coronavirus wtic-MB [TAX:698419]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus; recombinant SARSr-CoV
GenBank
SARS coronavirus wtic-MB isolate P3pp21, complete genome.
Evidence Other
   Comment Culture cell line: Vero E6 (African green monkey kidney cells)
DBLINKS
ViralZone:  

Scientific NameSchmallenberg virus [TAX:1133363]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus schmallenbergense
RefSeq
Schmallenberg virus isolate F6 segment S, complete sequence.
Schmallenberg virus isolate F6 segment L, complete sequence.
Schmallenberg virus isolate F6 segment M, complete sequence.
Evidence Literature
   Reference PMID: 23996608
      Authors Hulst M, Kortekaas J, Hakze-van der Honing R, Vastenhouw S, Cornellissen J, van Maanen K, Bossers A, Harders F, Stockhofe N, van der Poel W
      Title Genetic characterization of an atypical Schmallenberg virus isolated from the brain of a malformed lamb.
      Journal Virus Genes. 2013 Dec;47(3):505-14.
DBLINKS
ViralZone:  

Scientific NameSimian adenovirus 16 [TAX:1715778]
LineageViruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Simian mastadenovirus E
RefSeq
Simian adenovirus 16 strain C-8, complete genome.
Evidence RefSeq
Evidence Literature
   Reference PMID: 26370792
      Authors Pantó L, Podgorski II, Jánoska M, Márkó O, Harrach B
      Title Taxonomy proposal for Old World monkey adenoviruses: characterisation of several non-human, non-ape primate adenovirus lineages.
      Journal Arch Virol. 2015 Dec;160(12):3165-77.
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameSimian adenovirus 18 [TAX:909210]
LineageViruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Simian mastadenovirus F
RefSeq
Simian adenovirus 18, complete genome.
Evidence Literature
   Reference PMID: 22709783
      Authors Roy S, Sandhu A, Medina A, Clawson DS, Wilson JM
      Title Adenoviruses in fecal samples from asymptomatic rhesus macaques, United States.
      Journal Emerg Infect Dis. 2012 Jul;18(7):1081-8.
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameSimian adenovirus 20 [TAX:585059]
LineageViruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Simian mastadenovirus G
RefSeq
Simian adenovirus 20 strain ATCC VR-541, complete genome.
Evidence Literature
   Reference PMID: 22709783
      Authors Roy S, Sandhu A, Medina A, Clawson DS, Wilson JM
      Title Adenoviruses in fecal samples from asymptomatic rhesus macaques, United States.
      Journal Emerg Infect Dis. 2012 Jul;18(7):1081-8.
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameSimian adenovirus 48 [TAX:995021]
LineageViruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Simian mastadenovirus A
GenBank
Simian adenovirus 48 isolate AJ75, complete genome.
Evidence Literature
   Reference PMID: 19578438
      Authors Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
      Title Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
      Journal PLoS Pathog. 2009 Jul;5(7):e1000503.
   Comment Culture cell line: BS-C-1 (African green monkey epithelial kidney)
DBLINKS
ViralZone:  

Scientific NameSimian adenovirus 49 [TAX:995022]
LineageViruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Simian mastadenovirus B
RefSeq
Simian adenovirus 49, complete genome.
Evidence Literature
   Reference PMID: 19578438
      Authors Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
      Title Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
      Journal PLoS Pathog. 2009 Jul;5(7):e1000503.
   Comment Culture cell line: BS-C-1 (African green monkey epithelial kidney)
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameSimian adenovirus 50 [TAX:995023]
LineageViruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Simian mastadenovirus B
GenBank
Simian adenovirus 50 isolate 18222, complete genome.
Evidence Literature
   Reference PMID: 19578438
      Authors Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
      Title Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
      Journal PLoS Pathog. 2009 Jul;5(7):e1000503.
   Comment Culture cell line: BS-C-1 (African green monkey epithelial kidney)
DBLINKS
ViralZone:  

Scientific NameSimian adenovirus 6 [TAX:413259]
LineageViruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Simian mastadenovirus A
GenBank
Simian adenovirus 6 strain SV-39 from USA, complete genome.
Evidence Literature
   Reference PMID: 19578438
      Authors Roy S, Vandenberghe LH, Kryazhimskiy S, Grant R, Calcedo R, Yuan X, Keough M, Sandhu A, Wang Q, Medina-Jaszek CA, Plotkin JB, Wilson JM
      Title Isolation and characterization of adenoviruses persistently shed from the gastrointestinal tract of non-human primates.
      Journal PLoS Pathog. 2009 Jul;5(7):e1000503.
   Comment Culture cell line: BS-C-1 (African green monkey epithelial kidney)
DBLINKS
ViralZone:  

Scientific NameSimian endogenous retrovirus vero ATCC CCL-81 [TAX:1051323]
LineageViruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Betaretrovirus; Mason-Pfizer monkey virus
GenBank
Simian endogenous retrovirus vero ATCC CCL-81 isolate SRVcae, complete genome.
Evidence Literature
   Reference PMID: 21651935
      Authors Onions D, Côté C, Love B, Toms B, Koduri S, Armstrong A, Chang A, Kolman J
      Title Ensuring the safety of vaccine cell substrates by massively parallel sequencing of the transcriptome.
      Journal Vaccine. 2011 Sep 22;29(41):7117-21.
   Comment Culture cell line: Vero cells (ATCC CCL-81)
DBLINKS
ViralZone:  

Scientific NameSimian hemorrhagic fever virus [TAX:38143]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Arnidovirineae; Arteriviridae; Simarterivirinae; Deltaarterivirus; Hedartevirus; Deltaarterivirus hemfev
RefSeq
Simian hemorrhagic fever virus, complete genome.
Evidence RefSeq
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameSimian immunodeficiency virus [TAX:11723]
LineageViruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus
RefSeq
Simian immunodeficiency virus, complete genome.
Evidence RefSeq
DBLINKS
KEGG BRITE:  
ICTV:  
ViralZone:  

Scientific NameSimian mastadenovirus C [TAX:1962300]
LineageViruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus
GenBank
Simian adenovirus C isolate BaAdV-4, complete genome.
Evidence Literature
   Reference PMID: 23592261
      Authors Chiu CY, Yagi S, Lu X, Yu G, Chen EC, Liu M, Dick EJ Jr, Carey KD, Erdman DD, Leland MM, Patterson JL
      Title A novel adenovirus species associated with an acute respiratory outbreak in a baboon colony and evidence of coincident human infection.
      Journal mBio. 2013 Apr 16;4(2):e00084.
   Comment Culture cell line: A549, PMK, Vero, CyMK cells
DBLINKS
ICTV:  
ViralZone:  

Scientific NameSindbis-like virus YN87448 [TAX:84272]
LineageViruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus; Sindbis virus
GenBank
Sindbis-like virus YN87448, complete genome.
Evidence Literature
   Reference PMID: 22082202
      Authors Wu-yang Z, Guo-dong L
      Title Research on basis of reverse genetics system of a Sindbis-like virus XJ-160.
      Journal Virol J. 2011 Nov 14;8:519.
   Comment Culture cell line: BHK-21 cells, Vero cells, C6/36 cells
DBLINKS
ViralZone:  

Scientific NameSkunkpox virus [TAX:160796]
LineageViruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus
RefSeq
Skunkpox virus strain WA, complete genome.
Evidence Literature
   Reference PMID: 27613417
      Authors Smithson C, Tang N, Sammons S, Frace M, Batra D, Li Y, Emerson GL, Carroll DS, Upton C
      Title The genomes of three North American orthopoxviruses.
      Journal Virus Genes. 2017 Feb;53(1):21-34.
   Comment Culture cell line: BSC-40 (african green monkey kidney cells)
DBLINKS
KEGG BRITE:  
ICTV:  
ViralZone:  

Scientific NameTahyna virus [TAX:45270]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus tahynaense
RefSeq
Tahyna virus strain XJ0625 segment M, complete sequence.
Tahyna virus strain XJ0625 segment S, complete sequence.
Tahyna virus strain XJ0625 segment L, complete sequence.
Evidence Literature
   Reference PMID: 19193280
      Authors Lu Z, Lu XJ, Fu SH, Zhang S, Li ZX, Yao XH, Feng YP, Lambert AJ, Ni da X, Wang FT, Tong SX, Nasci RS, Feng Y, Dong Q, Zhai YG, Gao XY, Wang HY, Tang Q, Liang GD
      Title Tahyna virus and human infection, China.
      Journal Emerg Infect Dis. 2009 Feb;15(2):306-9.
   Comment culture cell line: BHK–21 and Vero ce
culture cell line: BHK–21 and Vero cell
DBLINKS
ViralZone:  

Scientific NameTamana bat virus [TAX:161675]
LineageViruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus; unclassified Flavivirus
RefSeq
Tamana bat virus, genome.
Evidence Literature
   Reference PMID: 31531178
      Authors Zhang Z, Rong L, Li YP
      Title <i>Flaviviridae</i> Viruses and Oxidative Stress: Implications for Viral Pathogenesis.
      Journal Oxid Med Cell Longev. 2019;2019:1409582.
   Comment Culture cell line: Vero cells Laboratory host: house mouse
Evidence Literature
   Reference PMID: 12237426
      Authors de Lamballerie X, Crochu S, Billoir F, Neyts J, de Micco P, Holmes EC, Gould EA
      Title Genome sequence analysis of Tamana bat virus and its relationship with the genus Flavivirus.
      Journal J Gen Virol. 2002 Oct;83(Pt 10):2443-2454.
   Comment Culture cell line: Vero cells Laboratory host: house mouse
DBLINKS
KEGG BRITE:  
ViralZone:  

Scientific NameTanapox virus [TAX:99000]
LineageViruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Yatapoxvirus
GenBank
Tanapox virus isolate TPV-RoC, complete genome.
Evidence Literature
   Reference PMID: 14736928
      Authors Dhar AD, Werchniak AE, Li Y, Brennick JB, Goldsmith CS, Kline R, Damon I, Klaus SN
      Title Tanapox infection in a college student.
      Journal N Engl J Med. 2004 Jan 22;350(4):361-6.
   Comment Culture cell line: BSC-40 (african green monkey kidney cells)
DBLINKS
ICTV:  
ViralZone:  

Scientific NameTensaw virus [TAX:273347]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus tensawense
RefSeq
Tensaw virus strain TSV-FE3-66FB segment L, complete sequence.
Tensaw virus strain TSV-FE3-66FB segment S, complete sequence.
Tensaw virus strain TSV-FE3-66FB segment M, complete sequence.
Evidence Literature
   Reference PMID: 19760176
      Authors Watts SL, Garcia-Maruniak A, Maruniak JE
      Title Tensaw virus genome sequence and its relation to other Bunyaviridae.
      Journal Virus Genes. 2009 Dec;39(3):309-18.
   Comment Culture cell line: Vero cells
DBLINKS
ViralZone:  

Scientific NameThogotovirus dhoriense [TAX:11318]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Thogotovirus
RefSeq
Dhori virus isolate Dhori/1313/61 segment 3, complete sequence.
Dhori virus isolate Dhori/1313/61 segment 4, complete sequence.
Dhori virus isolate Dhori/1313/61 segment 6, complete sequence.
Dhori virus isolate Dhori/1313/61 segment 1, complete sequence.
Dhori virus isolate Dhori/1313/61 segment 5, complete sequence.
Dhori virus isolate Dhori/1313/61 segment 2, complete sequence.
Evidence Literature
   Reference PMID: 1402803
      Authors Clay WC, Fuller FJ
      Title Nucleotide sequence of the tick-borne orthomyxo-like Dhori/India/1313/61 virus membrane protein gene.
      Journal J Gen Virol. 1992 Oct;73 ( Pt 10):2609-16.
   Comment Culture cell line: Vero cells (African green monkey kidney)
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Scientific NameTianjin totivirus [TAX:1163537]
LineageViruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; unclassified Totiviridae
RefSeq
Tianjin totivirus, complete genome.
Evidence Literature
   Reference PMID: 22421961
      Authors Yang X, Zhang Y, Ge X, Yuan J, Shi Z
      Title A novel totivirus-like virus isolated from bat guano.
      Journal Arch Virol. 2012 Jun;157(6):1093-9.
   Comment Culture cell line: Vero
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Scientific NameTofla virus [TAX:1615758]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Nairoviridae; Orthonairovirus; Orthonairovirus japonicum
RefSeq
Tofla virus viral cRNA, complete genome, segment: S.
Tofla virus viral cRNA, complete genome, segment: M.
Tofla virus viral cRNA, complete genome, segment: L.
Evidence Literature
   Reference PMID: 26863911
      Authors Shimada S, Aoki K, Nabeshima T, Fuxun Y, Kurosaki Y, Shiogama K, Onouchi T, Sakaguchi M, Fuchigami T, Ono H, Nishi K, Posadas-Herrera G, Uchida L, Takamatsu Y, Yasuda J, Tsutsumi Y, Fujita H, Morita K, Hayasaka D
      Title Tofla virus: A newly identified Nairovirus of the Crimean-Congo hemorrhagic fever group isolated from ticks in Japan.
      Journal Sci Rep. 2016 Feb 11;6:20213.
   Comment Culture cell line: Vero E6, SK-N-SH, T98-G and HEK-293 cells
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Scientific NameToscana virus [TAX:11590]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus toscanaense
GenBank
X53794  
Toscana virus sRNA for NS and N protein.
X89628  
Toscana virus M segment, genomic RNA, strain toscana.
Evidence Literature
   Reference PMID: 1846496
      Authors Giorgi C, Accardi L, Nicoletti L, Gro MC, Takehara K, Hilditch C, Morikawa S, Bishop DH
      Title Sequences and coding strategies of the S RNAs of Toscana and Rift Valley fever viruses compared to those of Punta Toro, Sicilian Sandfly fever, and Uukuniemi viruses.
      Journal Virology. 1991 Feb;180(2):738-53.
   Comment Culture cell line: Vero cells, BHK cells
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Scientific NameTulane virus [TAX:512169]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Recovirus; Recovirus A
RefSeq
Tulane virus nonstructural polyprotein, capsid protein, and minor structural protein VP2 genes, complete cds.
Evidence Literature
   Reference PMID: 18385231
      Authors Farkas T, Sestak K, Wei C, Jiang X
      Title Characterization of a rhesus monkey calicivirus representing a new genus of Caliciviridae.
      Journal J Virol. 2008 Jun;82(11):5408-16.
   Comment Culture cell line: Caco-2 cells,Vero cells, MA104 cells, LLC-MK2 cells
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Scientific NameUpolu virus [TAX:1428581]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Thogotovirus; Thogotovirus upoluense
RefSeq
Upolu virus segment 1 polymerase basic subunit 2 (PB2) gene, complete cds.
Upolu virus segment 6 matrix (ML) gene, complete cds.
Upolu virus segment 2 polymerase basic subunit 1 (PB1) gene, complete cds.
Upolu virus segment 4 glycoprotein (gp) gene, complete cds.
Upolu virus segment 3 PA polymerase subunit (PA) gene, complete cds.
Upolu virus segment 5 nucleoprotein (NP) gene, complete cds.
Evidence Literature
   Reference PMID: 24574415
      Authors Briese T, Chowdhary R, Travassos da Rosa A, Hutchison SK, Popov V, Street C, Tesh RB, Lipkin WI
      Title Upolu virus and Aransas Bay virus, two presumptive bunyaviruses, are novel members of the family Orthomyxoviridae.
      Journal J Virol. 2014 May;88(10):5298-309.
   Comment Culture cell line: BHK, Vero E6, HEK 293 cells
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Scientific NameUriurana virus [TAX:1055750]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus uriuranaense
RefSeq
Uriurana virus strain BeAr479776 segment M, complete sequence.
Uriurana virus strain BeAr479776 segment L, complete sequence.
Uriurana virus strain BeAr479776 segment S, complete sequence.
Uriurana virus segment M, complete sequence.
Uriurana virus segment L, complete sequence.
Uriurana virus segment S, complete sequence.
Evidence Literature
   Reference PMID: 28141497
      Authors Nunes-Neto JP, Souza WM, Acrani GO, Romeiro MF, Fumagalli M, Vieira LC, Medeiros DBA, Lima JA, Lima CPS, Cardoso JF, Figueiredo LTM, Silva SPD, Tesh R, Nunes MRT, Vasconcelos PFDC
      Title Characterization of the Bujaru, frijoles and Tapara antigenic complexes into the sandfly fever group and two unclassified phleboviruses from Brazil.
      Journal J Gen Virol. 2017 Apr;98(4):585-594.
   Comment Culture cell line: Vero cells (CCL81)
Culture cell line:Vero cells (CCL81)
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Scientific NameVesiculovirus bogdanovac [TAX:1972567]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Vesiculovirus
RefSeq
Yug Bogdanovac virus, complete genome.
Evidence Literature
   Reference PMID: 23065467
      Authors Pfeffer M, Dilcher M, Tesh RB, Hufert FT, Weidmann M
      Title Genetic characterization of Yug Bogdanovac virus.
      Journal Virus Genes. 2013 Feb;46(1):201-2.
   Comment Culture cell line: Vero B4 cells
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Scientific NameVESV-like calicivirus [TAX:82664]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Vesivirus; Vesicular exanthema of swine virus
GenBank
VESV-like calicivirus strain Pan-1, complete genome.
Evidence Literature
   Reference PMID: 10076521
      Authors Rinehart-Kim JE, Zhong WM, Jiang X, Smith AW, Matson DO
      Title Complete nucleotide sequence and genomic organization of a primate calicivirus, Pan-1.
      Journal Arch Virol. 1999;144(1):199-208.
   Comment Culture cell line: Vero cells and MA104 (african green monkey kidney cell line)
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Scientific NameViola virus [TAX:2182586]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus pantanalense
RefSeq
Viola virus RNA polymerase gene, complete cds.
Viola virus polyprotein gene, complete cds.
Evidence Literature
   Reference PMID: 29996902
      Authors de Carvalho MS, de Lara Pinto AZ, Pinheiro A, Rodrigues JSV, Melo FL, da Silva LA, Ribeiro BM, Dezengrini-Slhessarenko R
      Title Viola phlebovirus is a novel Phlebotomus fever serogroup member identified in Lutzomyia (Lutzomyia) longipalpis from Brazilian Pantanal.
      Journal Parasit Vectors. 2018 Jul 11;11(1):405.
   Comment Culture cell line: Vero cells
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Scientific NameVolepox virus [TAX:28874]
LineageViruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus
RefSeq
Volepox virus strain CA, complete genome.
Evidence Literature
   Reference PMID: 27613417
      Authors Smithson C, Tang N, Sammons S, Frace M, Batra D, Li Y, Emerson GL, Carroll DS, Upton C
      Title The genomes of three North American orthopoxviruses.
      Journal Virus Genes. 2017 Feb;53(1):21-34.
   Comment Culture cell line: BSC-40 (african green monkey kidney cells)
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Scientific NameWad Medani virus [TAX:40067]
LineageViruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus
RefSeq
Wad Medani virus isolate SUD1952/01 segment 1 RNA-dependent RNA polymerase (VP1) gene, complete cds.
Wad Medani virus isolate SUD1952/01 segment 2 inner core protein (VP2) gene, complete cds.
Wad Medani virus isolate SUD1952/01 segment 3 capping enzyme (VP3) gene, complete cds.
Wad Medani virus isolate SUD1952/01 segment 4 outer capsid protein (VP4) gene, complete cds.
Wad Medani virus isolate SUD1952/01 segment 5 tubule protein (NS1) gene, complete cds.
Wad Medani virus isolate SUD1952/01 segment 6 outer capsid protein 2 (VP5) gene, complete cds.
Wad Medani virus isolate SUD1952/01 segment 7 viral inclusion body protein (NS2) gene, complete cds.
Wad Medani virus isolate SUD1952/01 segment 8 major core protein (VP7) gene, complete cds.
Wad Medani virus isolate SUD1952/01 segment 9 helicase (VP6) and NS4 protein (NS4) genes, complete cds.
Wad Medani virus isolate SUD1952/01 segment 10 NS3 protein (NS3) and NS3a protein (NS3a) genes, complete cds.
Evidence Literature
   Reference Isolation and characterization of Wad Medani virus obtained in the tuva Republic of Russia
   Comment Culture cell line: PEK, Vero, and BHK
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Scientific NameWest Nile virus strain 385-99 [TAX:307044]
LineageViruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus nilense; West Nile virus
GenBank
West Nile virus strain 385-99, complete genome.
Evidence Literature
   Reference PMID: 16222029
      Authors Ding X, Wu X, Duan T, Siirin M, Guzman H, Yang Z, Tesh RB, Xiao SY
      Title Nucleotide and amino acid changes in West Nile virus strains exhibiting renal tropism in hamsters.
      Journal Am J Trop Med Hyg. 2005 Oct;73(4):803-7.
   Comment Culture cell line: Vero cells (African green monkeys)
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Scientific NameWolkberg virus [TAX:1867943]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Orthobunyavirus wolkbergense
RefSeq
Wolkberg virus isolate 2562_SA3 segment M glycoprotein gene, complete cds.
Wolkberg virus isolate 2562_SA3 segment S nucleoprotein gene, complete cds.
Wolkberg virus isolate 2562_SA3 segment L RNA-dependent RNA polymerase gene, complete cds.
Evidence Literature
   Reference PMID: 28488954
      Authors Jansen van Vuren P, Wiley MR, Palacios G, Storm N, Markotter W, Birkhead M, Kemp A, Paweska JT
      Title Isolation of a novel orthobunyavirus from bat flies (Eucampsipoda africana).
      Journal J Gen Virol. 2017 May;98(5):935-945.
   Comment Culture cell line: VeroE6 (African green monkey kidney cells) and C6-36 (Aedes albopictus mosquitoes cells)
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Scientific NameYichang virus [TAX:2053026]
LineageViruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Mesnidovirineae; Mesoniviridae; Hexponivirinae; Alphamesonivirus; Yilivirus; Alphamesonivirus 11
RefSeq
Yichang virus isolate HB-MLV, complete genome.
Evidence Literature
   Reference PMID: 28823942
      Authors Wang Y, Xia H, Zhang B, Liu X, Yuan Z
      Title Isolation and characterization of a novel mesonivirus from Culex mosquitoes in China.
      Journal Virus Res. 2017 Aug 15;240:130-139.
   Comment Culture cell line: Vero, BHK-21, human embryonic kidney [293T]
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Scientific NameZerdali virus [TAX:1764086]
LineageViruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Phlebovirus zerdaliense
RefSeq
Zerdali virus strain 37 segment L, complete sequence.
Zerdali virus strain 37 segment M, complete sequence.
Zerdali virus strain 37 segment S, complete sequence.
Evidence Literature
   Reference PMID: 27007326
      Authors Alkan C, Erisoz Kasap O, Alten B, de Lamballerie X, Charrel RN
      Title Sandfly-Borne Phlebovirus Isolations from Turkey: New Insight into the Sandfly fever Sicilian and Sandfly fever Naples Species.
      Journal PLoS Negl Trop Dis. 2016 Mar;10(3):e0004519.
   Comment Culture cell line: Vero cells
Culture cell line: Vero cells
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Scientific NameZika virus [TAX:64320]
LineageViruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus zikaense
RefSeq
Zika virus, complete genome.
DISEASE
H01553  
Zika fever; Zika virus disease
Evidence Literature
   Reference PMID: 27174284
      Authors Ladner JT, Wiley MR, Prieto K, Yasuda CY, Nagle E, Kasper MR, Reyes D, Vasilakis N, Heang V, Weaver SC, Haddow A, Tesh RB, Sovann L, Palacios G
      Title Complete Genome Sequences of Five Zika Virus Isolates.
      Journal Genome Announc. 2016 May 12;4(3).
   Comment Culture cell line: vero cells, AP61, C6/36, SM
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