Current Statistics of KO Assignment
As of 2025/4/15
Summary
# of proteins | with KOs | # of RNAs | with KOs | ||
Animals | 14,208,883 | 9,459,046 | (66.6%) | 803,516 | 95,984 |
Plants | 5,349,312 | 1,953,128 | (36.5%) | 319,935 | 14,978 |
Fungi | 1,861,025 | 697,911 | (37.5%) | 15,857 | 6,120 |
Protists | 748,834 | 168,171 | (22.5%) | 4,181 | 1,095 |
Bacteria | 33,190,853 | 17,126,232 | (51.6%) | 689,488 | 541,315 |
Archaea | 1,134,646 | 526,495 | (46.4%) | 23,766 | 17,345 |
Viruses | 676,333 | 56,731 | (8.4%) | 12,287 | 646 |
Total | 56,493,553 | 29,930,983 | (53.0%) | 1,856,743 | 676,837 |
Animals | Type* | Protein | w. KO | RNA | w. KO | |
Mammals | ||||||
Primates | ||||||
hsa | Homo sapiens (human) | Ref | 20,535 | 16,407 | 4,150 | 1,490 |
ptr | Pan troglodytes (chimpanzee) | 22,560 | 17,092 | 4,167 | 1,443 | |
pps | Pan paniscus (bonobo) | 22,890 | 17,378 | 3,247 | 1,217 | |
ggo | Gorilla gorilla gorilla (western lowland gorilla) | 22,635 | 17,279 | 3,904 | 1,194 | |
pon | Pongo abelii (Sumatran orangutan) | 22,189 | 17,022 | 3,230 | 1,170 | |
ppyg | Pongo pygmaeus (Bornean orangutan) | 22,085 | 17,377 | 3,545 | 3 | |
nle | Nomascus leucogenys (northern white-cheeked gibbon) | 20,527 | 16,454 | 2,673 | 1,171 | |
hmh | Hylobates moloch (silvery gibbon) | 21,733 | 16,958 | 2,610 | 511 | |
ssyn | Symphalangus syndactylus (siamang) | 22,101 | 17,287 | 3,300 | 2 | |
mcc | Macaca mulatta (rhesus monkey) | Ref | 21,121 | 16,866 | 3,307 | 1,325 |
mcf | Macaca fascicularis (crab-eating macaque) | 21,826 | 17,261 | 3,516 | 1,064 | |
mthb | Macaca thibetana thibetana (Pere David's macaque) | 21,402 | 17,233 | 2,640 | 1,060 | |
mni | Macaca nemestrina (pig-tailed macaque) | 21,017 | 16,413 | 2,581 | 491 | |
csab | Chlorocebus sabaeus (green monkey) | 20,994 | 16,299 | 24 | 24 | |
caty | Cercocebus atys (sooty mangabey) | 20,627 | 16,495 | 24 | 20 | |
panu | Papio anubis (olive baboon) | 21,087 | 16,664 | 2,638 | 1,077 | |
tge | Theropithecus gelada (gelada) | 20,683 | 16,666 | 2,650 | 1,089 | |
mleu | Mandrillus leucophaeus (drill) | 20,267 | 16,118 | |||
rro | Rhinopithecus roxellana (golden snub-nosed monkey) | 21,094 | 16,961 | 2,811 | 1,125 | |
rbb | Rhinopithecus bieti (black snub-nosed monkey) | 21,657 | 16,526 | 24 | 18 | |
tfn | Trachypithecus francoisi (Francois's langur) | 21,701 | 17,484 | 2,734 | 1,073 | |
pteh | Piliocolobus tephrosceles (Ugandan red Colobus) | 21,528 | 16,591 | 2,653 | 1,083 | |
cang | Colobus angolensis palliatus (Angola colobus) | 20,103 | 16,061 | |||
cjc | Callithrix jacchus (white-tufted-ear marmoset) | 22,368 | 17,130 | 3,931 | 456 | |
sbq | Saimiri boliviensis boliviensis (Bolivian squirrel monkey) | 19,742 | 15,910 | 24 | 24 | |
cimi | Cebus imitator (Panamanian white-faced capuchin) | 21,544 | 17,420 | 3,660 | 491 | |
anan | Aotus nancymaae (Ma's night monkey) | 21,779 | 17,772 | 4,186 | 18 | |
csyr | Carlito syrichta (Philippine tarsier) | 20,017 | 15,409 | 24 | 21 | |
mmur | Microcebus murinus (gray mouse lemur) | 20,522 | 16,734 | 24 | 20 | |
lcat | Lemur catta (Ring-tailed lemur) | 19,990 | 16,357 | 3,069 | 584 | |
pcoq | Propithecus coquereli (Coquerel's sifaka) | 19,391 | 15,910 | 24 | 2 | |
oga | Otolemur garnettii (small-eared galago) | 19,558 | 16,295 | 3,824 | 601 | |
Rodents | ||||||
mmu | Mus musculus (house mouse) | Ref | 22,412 | 17,773 | 3,697 | 944 |
mcal | Mus caroli (Ryukyu mouse) | 21,002 | 17,209 | 2,129 | 339 | |
mpah | Mus pahari (shrew mouse) | 20,380 | 17,016 | 24 | 20 | |
rno | Rattus norvegicus (rat) | Ref | 23,167 | 17,712 | 3,264 | 1,315 |
mcoc | Mastomys coucha (southern multimammate mouse) | 20,166 | 16,637 | 2,768 | 616 | |
anu | Arvicanthis niloticus (African grass rat) | 22,234 | 18,008 | 2,542 | 338 | |
asyl | Apodemus sylvaticus (European woodmouse) | 22,444 | 17,942 | 2,899 | ||
mun | Meriones unguiculatus (Mongolian gerbil) | 21,272 | 16,779 | 3,157 | 205 | |
cge | Cricetulus griseus (Chinese hamster) | 21,789 | 17,683 | 1,785 | 607 | |
maua | Mesocricetus auratus (golden hamster) | 21,616 | 17,470 | 1,674 | 439 | |
prob | Phodopus roborovskii (desert hamster) | 20,480 | 16,909 | 1,413 | 1 | |
pleu | Peromyscus leucopus (white-footed mouse) | 22,198 | 18,213 | 1,607 | 444 | |
morg | Microtus oregoni (creeping vole) | 25,418 | 20,686 | 1,991 | 433 | |
mfot | Alexandromys fortis (reed vole) | 21,656 | 17,694 | 1,229 | 391 | |
aamp | Arvicola amphibius (Eurasian water vole) | 21,424 | 17,791 | 1,472 | 423 | |
ngi | Nannospalax galili (Upper Galilee mountains blind mole rat) | 20,703 | 16,904 | 24 | 24 | |
hgl | Heterocephalus glaber (naked mole-rat) | 19,811 | 16,457 | 24 | 24 | |
cpoc | Cavia porcellus (domestic guinea pig) | 19,976 | 16,392 | 2,626 | 505 | |
ccan | Castor canadensis (American beaver) | 21,712 | 16,621 | 24 | 20 | |
dord | Dipodomys ordii (Ord's kangaroo rat) | 19,786 | 16,033 | |||
dsp | Dipodomys spectabilis (banner-tailed kangaroo rat) | 20,632 | 16,942 | 4,112 | 465 | |
plop | Perognathus longimembris pacificus (Pacific pocket mouse) | 20,883 | 17,079 | 1,631 | 264 | |
ncar | Sciurus carolinensis (gray squirrel) | 21,772 | 17,943 | 1,783 | 425 | |
mmma | Marmota marmota marmota (Alpine marmot) | 21,014 | 16,998 | 1,664 | 6 | |
iti | Ictidomys tridecemlineatus (thirteen-lined ground squirrel) | 20,734 | 16,965 | 1,511 | ||
Lagomorpha | ||||||
ocu | Oryctolagus cuniculus (rabbit) | Ref | 22,460 | 17,104 | 1,914 | 252 |
opi | Ochotona princeps (American pika) | 18,885 | 15,787 | 1,681 | 424 | |
Scandentia | ||||||
tup | Tupaia chinensis (Chinese tree shrew) | 21,235 | 17,425 | 177 | 107 | |
Dermoptera | ||||||
gvr | Galeopterus variegatus (Sunda flying lemur) | 22,834 | 16,507 | 24 | 1 | |
Carnivora | ||||||
cfa | Canis lupus familiaris (dog) | Ref | 20,087 | 16,263 | 2,144 | 635 |
clud | Canis lupus dingo (dingo) | 20,775 | 16,884 | 1,809 | 475 | |
vvp | Vulpes vulpes (red fox) | 19,366 | 16,113 | 1,761 | 477 | |
vlg | Vulpes lagopus (Arctic fox) | 20,695 | 16,981 | 1,877 | 454 | |
npo | Nyctereutes procyonoides (raccoon dog) | 20,849 | 17,242 | 1,822 | 288 | |
aml | Ailuropoda melanoleuca (giant panda) | 20,837 | 16,511 | 1,611 | 438 | |
umr | Ursus maritimus (polar bear) | 20,419 | 16,730 | 1,598 | 273 | |
uah | Ursus arctos (brown bear) | 20,306 | 16,777 | 1,771 | 417 | |
uar | Ursus americanus (American black bear) | 20,389 | 17,007 | 1,586 | 445 | |
elk | Enhydra lutris kenyoni (northern sea otter) | 19,327 | 16,196 | |||
llv | Lutra lutra (Eurasian river otter) | 20,777 | 16,941 | 1,864 | 469 | |
mpuf | Mustela putorius furo (domestic ferret) | 19,680 | 16,157 | |||
mnp | Mustela nigripes (black-footed ferret) | 20,269 | 16,730 | 1,750 | 278 | |
mlk | Mustela lutreola (European mink) | 20,701 | 16,934 | 2,484 | 1 | |
nvs | Neogale vison (American mink) | 20,422 | 16,979 | 2,322 | 335 | |
oro | Odobenus rosmarus divergens (Pacific walrus) | 19,399 | 16,259 | |||
eju | Eumetopias jubatus (Steller sea lion) | 19,668 | 16,358 | 1,794 | 511 | |
zca | Zalophus californianus (California sea lion) | 21,397 | 17,755 | 1,770 | 481 | |
mlx | Mirounga leonina (Southern elephant seal) | 19,899 | 16,604 | 1,965 | 508 | |
nsu | Neomonachus schauinslandi (Hawaiian monk seal) | 19,838 | 16,582 | 1,893 | 482 | |
lww | Leptonychotes weddellii (Weddell seal) | 22,214 | 15,490 | 1,842 | 263 | |
fca | Felis catus (domestic cat) | Ref | 20,453 | 16,439 | 1,813 | 481 |
pyu | Puma yagouaroundi (jaguarundi) | 19,954 | 16,233 | 1,790 | 475 | |
pcoo | Puma concolor (puma) | 17,659 | 14,763 | 1,673 | 308 | |
pbg | Prionailurus bengalensis (leopard cat) | 20,003 | 16,568 | 2,572 | 539 | |
pviv | Prionailurus viverrinus (fishing cat) | 20,111 | 16,534 | 2,068 | 1 | |
lruf | Lynx rufus (bobcat) | 19,863 | 16,549 | 1,949 | 466 | |
lgf | Leopardus geoffroyi (Geoffroy's cat) | 20,127 | 16,484 | 1,749 | ||
aju | Acinonyx jubatus (cheetah) | 20,012 | 16,306 | 1,735 | 477 | |
ptg | Panthera tigris altaica (Amur tiger) | 18,496 | 15,376 | |||
ppad | Panthera pardus (leopard) | 20,318 | 16,422 | 24 | 17 | |
puc | Panthera uncia (snow leopard) | 20,201 | 16,407 | 1,771 | 329 | |
plez | Panthera leo (lion) | 19,491 | 16,029 | 1,736 | ||
hhv | Hyaena hyaena (striped hyena) | 20,024 | 16,684 | 1,742 | 470 | |
Artiodactyla | ||||||
bta | Bos taurus (cow) | Ref | 21,669 | 17,398 | 2,713 | 790 |
bom | Bos mutus (wild yak) | 20,029 | 16,484 | 1,672 | 24 | |
biu | Bos indicus (zebu cattle) | 19,786 | 16,230 | 24 | 21 | |
bbub | Bubalus bubalis (water buffalo) | 21,359 | 17,250 | 4,098 | 540 | |
bbis | Bison bison bison (American bison) | 20,644 | 16,425 | |||
chx | Capra hircus (goat) | 20,572 | 17,003 | 288 | 160 | |
oas | Ovis aries (sheep) | 21,300 | 17,410 | 1,845 | 569 | |
btax | Budorcas taxicolor (takin) | 20,434 | 17,233 | 1,817 | 327 | |
csum | Capricornis sumatraensis (Sumatran serow) | 20,155 | 16,921 | 1,899 | ||
oda | Oryx dammah (scimitar-horned oryx) | 21,161 | 17,606 | 1,578 | 493 | |
ccad | Cervus canadensis (wapiti) | 22,361 | 18,125 | 4,998 | 785 | |
mree | Muntiacus reevesi (Reeves' muntjac) | 21,423 | 17,862 | 2,757 | 1 | |
ovr | Odocoileus virginianus (white-tailed deer) | 20,237 | 16,701 | 2,206 | ||
mbez | Moschus berezovskii (Chinese forest musk deer) | 20,842 | 17,095 | 1,531 | 285 | |
ssc | Sus scrofa (pig) | Ref | 20,666 | 16,686 | 342 | 175 |
cfr | Camelus ferus (Wild Bactrian camel) | 20,222 | 16,171 | 1,414 | 506 | |
cbai | Camelus bactrianus (Bactrian camel) | 19,171 | 15,713 | 24 | 21 | |
cdk | Camelus dromedarius (Arabian camel) | 20,062 | 16,214 | 1,480 | 484 | |
vpc | Vicugna pacos (alpaca) | 19,490 | 15,724 | 1,421 | 448 | |
bacu | Balaenoptera acutorostrata scammoni (minke whale) | 18,400 | 15,091 | |||
bmus | Balaenoptera musculus (blue whale) | 19,686 | 16,336 | 1,590 | 9 | |
lve | Lipotes vexillifer (Yangtze River dolphin) | 17,942 | 14,918 | 24 | 3 | |
oor | Orcinus orca (killer whale) | 19,396 | 15,649 | 2,060 | 312 | |
lalb | Lagenorhynchus albirostris (white-beaked dolphin) | 19,117 | 15,769 | 2,069 | ||
dle | Delphinapterus leucas (beluga whale) | 18,469 | 15,206 | 1,517 | 524 | |
pcad | Physeter macrocephalus (sperm whale) | 20,411 | 15,937 | 1,689 | 511 | |
psiu | Phocoena sinus (vaquita) | 19,069 | 15,745 | 1,554 | 476 | |
nasi | Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) | 18,245 | 14,941 | 1,502 | 319 | |
Perissodactyla | ||||||
ecb | Equus caballus (horse) | Ref | 21,129 | 17,379 | 1,614 | 593 |
epz | Equus przewalskii (Przewalski's horse) | 20,530 | 16,568 | 930 | 21 | |
eai | Equus asinus (ass) | 21,662 | 17,125 | 927 | 426 | |
Chiroptera | ||||||
myb | Myotis brandtii (Brandt's bat) | 20,001 | 16,141 | 24 | 24 | |
myd | Myotis davidii (David's myotis) | 18,864 | 15,411 | 24 | 24 | |
mmyo | Myotis myotis (greater mouse-eared bat) | 20,154 | 16,841 | 2,205 | 520 | |
mlf | Myotis lucifugus (little brown bat) | 19,966 | 15,915 | 2,310 | 516 | |
mdt | Myotis daubentonii (Daubenton's bat) | 21,049 | 17,468 | 2,374 | 9 | |
myum | Myotis yumanensis (Yuma myotis) | 19,673 | 16,423 | 2,399 | ||
pkl | Pipistrellus kuhlii (Kuhl's pipistrelle) | 19,189 | 16,036 | 1,866 | 454 | |
efus | Eptesicus fuscus (big brown bat) | 20,078 | 16,626 | 2,551 | 312 | |
mna | Miniopterus natalensis (Natal long-fingered bat) | 18,161 | 15,170 | |||
dro | Desmodus rotundus (common vampire bat) | 18,631 | 15,694 | 2,007 | 485 | |
shon | Sturnira hondurensis | 18,577 | 15,676 | 2,220 | 472 | |
ajm | Artibeus jamaicensis (Jamaican fruit-eating bat) | 19,344 | 15,269 | 2,316 | 493 | |
pdic | Phyllostomus discolor (pale spear-nosed bat) | 19,767 | 16,532 | 2,016 | 475 | |
phas | Phyllostomus hastatus (greater spear-nosed bat) | 19,524 | 16,344 | 2,024 | 465 | |
mmf | Molossus molossus (Pallas's mastiff bat) | 19,367 | 16,341 | 2,396 | 498 | |
ppam | Pteronotus mesoamericanus (Parnell's mustached bat) | 19,214 | 16,260 | 1,995 | 3 | |
hai | Hipposideros armiger (great roundleaf bat) | 18,920 | 15,330 | 24 | 1 | |
rfq | Rhinolophus ferrumequinum (greater horseshoe bat) | 19,651 | 16,352 | 1,235 | 470 | |
pale | Pteropus alecto (black flying fox) | 18,363 | 15,394 | 2,464 | 415 | |
pgig | Pteropus vampyrus (Indian flying fox) | 19,574 | 15,947 | 2,448 | 396 | |
pvp | Pteropus vampyrus (large flying fox) | 19,529 | 15,489 | 2,482 | 388 | |
ray | Rousettus aegyptiacus (Egyptian rousette) | 19,425 | 15,956 | 24 | 21 | |
Pholidota | ||||||
mjv | Manis javanica (Malayan pangolin) | 20,676 | 15,449 | 1,306 | 306 | |
Eulipotyphla | ||||||
tod | Talpa occidentalis (Iberian mole) | 21,597 | 17,464 | 1,507 | 452 | |
sara | Sorex araneus (European shrew) | 19,216 | 16,114 | |||
sfum | Sorex fumeus (smoky shrew) | 20,380 | 17,135 | 3,762 | ||
setr | Suncus etruscus (white-toothed pygmy shrew) | 19,819 | 16,769 | 13,014 | 4 | |
Proboscidea | ||||||
lav | Loxodonta africana (African savanna elephant) | 21,094 | 17,603 | 1,284 | 417 | |
other Eutheria | ||||||
tmu | Trichechus manatus latirostris (Florida manatee) | 19,095 | 15,983 | 1,086 | 405 | |
etf | Echinops telfairi (small Madagascar hedgehog) | 20,007 | 16,670 | 3,443 | 277 | |
dnm | Dasypus novemcinctus (nine-banded armadillo) | 22,044 | 17,382 | 4,036 | 640 | |
Didelphimorphia | ||||||
mdo | Monodelphis domestica (gray short-tailed opossum) | Ref | 20,907 | 16,819 | 483 | 164 |
gas | Gracilinanus agilis (agile gracile opossum) | 21,142 | 17,004 | 1,034 | 357 | |
other Metatheria | ||||||
shr | Sarcophilus harrisii (Tasmanian devil) | 19,966 | 16,194 | 777 | 353 | |
afz | Antechinus flavipes (yellow-footed antechinus) | 20,412 | 16,429 | 777 | 213 | |
pcw | Phascolarctos cinereus (koala) | 19,945 | 16,315 | 24 | 19 | |
tvp | Trichosurus vulpecula (common brushtail) | 22,532 | 19,108 | 909 | ||
pbrv | Petaurus breviceps papuanus (sugar glider) | 20,526 | 17,056 | 890 | ||
Monotremata | ||||||
oaa | Ornithorhynchus anatinus (platypus) | 18,152 | 15,055 | 7,051 | 439 | |
tacu | Tachyglossus aculeatus (Australian echidna) | 18,929 | 15,702 | 7,814 | ||
Birds | ||||||
Galliformes | ||||||
gga | Gallus gallus (chicken) | Ref | 17,478 | 13,030 | 1,109 | 341 |
pcoc | Phasianus colchicus (Ring-necked pheasant) | 16,222 | 12,792 | 307 | 209 | |
mgp | Meleagris gallopavo (turkey) | 17,974 | 12,755 | 354 | 221 | |
cjo | Coturnix japonica (Japanese quail) | 16,026 | 12,883 | 275 | 214 | |
tpai | Tympanuchus pallidicinctus (lesser prairie-chicken) | 15,563 | 12,564 | 273 | 111 | |
lmut | Lagopus muta (rock ptarmigan) | 16,078 | 12,712 | 382 | 118 | |
nmel | Numida meleagris (helmeted guineafowl) | 16,083 | 12,817 | 24 | 19 | |
Anseriformes | ||||||
apla | Anas platyrhynchos (mallard) | 16,836 | 13,156 | 343 | 196 | |
acyg | Anser cygnoides (swan goose) | 18,126 | 13,586 | 456 | 181 | |
cata | Cygnus atratus (black swan) | 15,671 | 13,021 | 349 | 122 | |
aful | Aythya fuligula (tufted duck) | 15,578 | 13,064 | 357 | 212 | |
Passeriformes | ||||||
tgu | Taeniopygia guttata (zebra finch) | 16,198 | 12,965 | 552 | 316 | |
lsr | Lonchura striata (white-rumped munia) | 15,577 | 12,915 | 250 | 180 | |
scan | Serinus canaria (common canary) | 15,281 | 12,481 | 282 | 213 | |
pmoa | Passer montanus (Eurasian tree sparrow) | 16,207 | 13,062 | 255 | 187 | |
otc | Onychostruthus taczanowskii (white-rumped snowfinch) | 15,777 | 12,776 | 253 | 192 | |
pruf | Pyrgilauda ruficollis (rufous-necked snowfinch) | 16,034 | 12,770 | 268 | 195 | |
atrc | Agelaius tricolor (tricolored blackbird) | 16,833 | 13,715 | 418 | ||
gfr | Geospiza fortis (medium ground-finch) | 14,183 | 11,942 | |||
fab | Ficedula albicollis (collared flycatcher) | 15,400 | 12,434 | 24 | 24 | |
oma | Oenanthe melanoleuca (Eastern black-eared wheatear) | 16,429 | 13,089 | 291 | 101 | |
phi | Pseudopodoces humilis (Tibetan ground-tit) | 15,814 | 13,205 | 24 | 16 | |
pmaj | Parus major (Great Tit) | 15,069 | 12,421 | 243 | 190 | |
ccae | Cyanistes caeruleus (blue tit) | 16,519 | 12,344 | 247 | 175 | |
ccw | Corvus cornix (hooded crow) | 14,435 | 11,913 | 243 | 167 | |
cbrc | Corvus brachyrhynchos (American crow) | 14,927 | 11,870 | |||
acoe | Aphelocoma coerulescens (scrub jay) | 17,513 | 14,063 | 1,682 | ||
etl | Empidonax traillii (willow flycatcher) | 16,293 | 12,965 | 251 | 187 | |
zab | Zonotrichia albicollis (white-throated sparrow) | 14,377 | 11,431 | 204 | 155 | |
zle | Zonotrichia leucophrys gambelii (white-crowned sparrow) | 16,563 | 13,614 | 277 | ||
achl | Acanthisitta chloris (rifleman) | 15,052 | 10,504 | |||
svg | Sturnus vulgaris (common starling) | 15,233 | 12,634 | |||
mmea | Malurus melanocephalus (red-backed fairy wren) | 15,788 | 12,430 | 263 | 108 | |
hrt | Hirundo rustica (Barn swallow) | 15,517 | 12,722 | 278 | 109 | |
sati | Sylvia atricapilla (blackcap) | 15,521 | 12,739 | 267 | ||
ccic | Cinclus cinclus (white-throated dipper) | 16,099 | 13,436 | 347 | ||
Falconiformes | ||||||
fpg | Falco peregrinus (peregrine falcon) | 14,860 | 12,522 | 24 | 24 | |
fch | Falco cherrug (Saker falcon) | 15,038 | 12,433 | 266 | 202 | |
Cariamiformes | ||||||
ccri | Cariama cristata (Red-legged seriema) | 14,999 | 10,416 | |||
Psittaciformes | ||||||
nnt | Nestor notabilis (Kea) | 14,740 | 10,517 | |||
shab | Strigops habroptila (Kakapo) | 16,053 | 13,163 | 302 | 119 | |
Strigiformes | ||||||
acun | Athene cunicularia (burrowing owl) | 13,841 | 11,424 | 219 | 175 | |
tala | Tyto alba (Barn owl) | 16,229 | 13,235 | 310 | 176 | |
Accipitriformes | ||||||
achc | Aquila chrysaetos chrysaetos (golden eagle) | 16,702 | 13,342 | 305 | 199 | |
hald | Haliaeetus albicilla (white-tailed eagle) | 14,895 | 9,934 | |||
hle | Haliaeetus leucocephalus (bald eagle) | 15,212 | 12,613 | |||
agen | Astur gentilis (Northern goshawk) | 16,989 | 13,520 | 523 | 195 | |
hhar | Harpia harpyja (harpy eagle) | 16,803 | 13,578 | 419 | ||
gcl | Gymnogyps californianus (California condor) | 15,144 | 12,498 | 272 | 148 | |
other Telluraves | ||||||
csti | Colius striatus (speckled mousebird) | 14,900 | 9,669 | |||
ldi | Leptosomus discolor (cuckoo roller) | 15,196 | 10,456 | |||
mnb | Merops nubicus (carmine bee-eater) | 14,559 | 9,617 | |||
dpub | Dryobates pubescens (Downy woodpecker) | 14,136 | 11,546 | |||
ppus | Pogoniulus pusillus (red-fronted tinkerbird) | 15,465 | 12,565 | 319 | ||
avit | Apaloderma vittatum (bar-tailed trogon) | 14,307 | 9,911 | |||
brhi | Buceros rhinoceros silvestris (rhinoceros hornbill) | 14,401 | 10,004 | |||
other Neoaves | ||||||
egz | Egretta garzetta (little egret) | 14,296 | 11,734 | 261 | 20 | |
nni | Nipponia nippon (crested ibis) | 15,031 | 12,477 | 24 | ||
pcri | Pelecanus crispus (Dalmatian pelican) | 15,254 | 10,107 | |||
pcao | Phalacrocorax carbo (great cormorant) | 14,394 | 9,682 | |||
padl | Pygoscelis adeliae (Adelie penguin) | 13,747 | 11,415 | 24 | 20 | |
afor | Aptenodytes forsteri (emperor penguin) | 14,550 | 12,015 | |||
fga | Fulmarus glacialis (Northern fulmar) | 15,108 | 10,150 | |||
gste | Gavia stellata (red-throated loon) | 14,678 | 9,852 | 24 | 18 | |
clv | Columba livia (rock pigeon) | 15,575 | 12,438 | 24 | 24 | |
mui | Mesitornis unicolor (brown roatelo) | 15,561 | 10,404 | |||
pguu | Pterocles gutturalis (yellow-throated sandgrouse) | 14,859 | 9,980 | |||
plet | Phaethon lepturus (White-tailed tropicbird) | 15,065 | 10,385 | |||
ehs | Eurypyga helias (sunbittern) | 14,721 | 9,674 | |||
cmac | Chlamydotis macqueenii (Macqueen's bustard) | 14,661 | 9,935 | |||
cuca | Cuculus canorus (common cuckoo) | 16,774 | 12,497 | 330 | ||
teo | Tauraco erythrolophus (red-crested turaco) | 14,922 | 10,342 | |||
breg | Balearica regulorum gibbericeps (East African grey crowned-crane) | 15,006 | 10,500 | |||
oha | Opisthocomus hoazin (hoatzin) | 13,333 | 10,841 | |||
acar | Antrostomus carolinensis (chuck-will's-widow) | 15,273 | 10,163 | 209 | 164 | |
cpea | Chaetura pelagica (chimney swift) | 14,101 | 11,571 | |||
cvf | Charadrius vociferus (killdeer) | 14,465 | 11,856 | |||
rtd | Rissa tridactyla (black-legged kittiwake) | 16,547 | 13,505 | 780 | 117 | |
crid | Chroicocephalus ridibundus (black-headed gull) | 16,778 | 13,615 | 343 | ||
Palaeognathae | ||||||
aam | Apteryx mantelli mantelli (North Island brown kiwi) | 16,251 | 12,543 | |||
arow | Apteryx rowi (Okarito brown kiwi) | 15,896 | 12,992 | 303 | 226 | |
npd | Nothoprocta perdicaria (Chilean tinamou) | 15,087 | 12,526 | 255 | 197 | |
tgt | Tinamus guttatus (white-throated tinamou) | 15,723 | 11,295 | |||
dne | Dromaius novaehollandiae (emu) | 15,554 | 12,636 | 283 | 222 | |
scam | Struthio camelus australis (South African ostrich) | 14,577 | 11,544 | |||
Reptiles | ||||||
Crocodylia | ||||||
asn | Alligator sinensis (Chinese alligator) | 19,129 | 15,219 | 494 | 261 | |
amj | Alligator mississippiensis (American alligator) | 18,955 | 15,113 | 24 | 24 | |
cpoo | Crocodylus porosus (Australian saltwater crocodile) | 14,717 | 12,171 | 24 | 12 | |
ggn | Gavialis gangeticus (Gharial) | 14,315 | 11,835 | 24 | 14 | |
Testudines | ||||||
pss | Pelodiscus sinensis (Chinese soft-shelled turtle) | 19,518 | 14,967 | 442 | 271 | |
cmy | Chelonia mydas (green sea turtle) | 19,752 | 15,484 | 508 | 292 | |
ccay | Caretta caretta (Loggerhead turtle) | 20,272 | 15,304 | 502 | 167 | |
dcc | Dermochelys coriacea (leatherback sea turtle) | 18,775 | 15,058 | 436 | 162 | |
cpic | Chrysemys picta (western painted turtle) | 21,498 | 16,274 | 494 | 291 | |
tst | Trachemys scripta elegans (red-eared slider) | 18,649 | 14,985 | 389 | 229 | |
cabi | Chelonoidis abingdonii (Abingdon island giant tortoise) | 19,989 | 15,551 | 513 | 291 | |
mrv | Mauremys reevesii (Reeves's turtle) | 22,605 | 17,464 | 1,297 | 310 | |
Squamata | ||||||
acs | Anolis carolinensis (green anole) | 19,365 | 14,627 | 292 | 152 | |
asao | Anolis sagrei ordinatus (Brown anole) | 19,987 | 15,503 | 365 | ||
pvt | Pogona vitticeps (central bearded dragon) | 18,904 | 14,876 | 24 | 7 | |
sund | Sceloporus undulatus (fence lizard) | 19,905 | 15,208 | 453 | 220 | |
pbi | Python bivittatus (Burmese python) | 19,806 | 15,081 | 311 | 212 | |
pmur | Protobothrops mucrosquamatus (Taiwan habu) | 20,508 | 15,616 | 374 | 215 | |
ctig | Crotalus tigris (Tiger rattlesnake) | 19,653 | 15,119 | 370 | 208 | |
tsr | Thamnophis sirtalis (common garter snake) | 18,565 | 12,952 | |||
pgut | Pantherophis guttatus (corn snake) | 20,058 | 15,351 | 361 | 196 | |
apri | Ahaetulla prasina (Asian vine snake) | 18,292 | 14,444 | 408 | ||
ptex | Pseudonaja textilis (eastern brown snake) | 19,358 | 14,502 | 335 | 121 | |
nss | Notechis scutatus (mainland tiger snake) | 19,770 | 13,998 | 354 | 120 | |
vko | Varanus komodoensis (Komodo dragon) | 17,968 | 14,618 | 299 | 192 | |
pmua | Podarcis muralis (common wall lizard) | 21,258 | 16,496 | 461 | 243 | |
praf | Podarcis raffonei (Aeolian wall lizard) | 20,895 | 16,340 | 515 | 153 | |
zvi | Zootoca vivipara (common lizard) | 20,278 | 16,201 | 431 | 239 | |
hcg | Hemicordylus capensis (graceful crag lizard) | 21,239 | 15,892 | 708 | 148 | |
gja | Gekko japonicus (Schlegel's Japanese gecko) | 19,476 | 15,202 | 24 | 24 | |
stow | Sphaerodactylus townsendi (Townsend's least gecko) | 18,976 | 14,550 | 403 | 190 | |
emc | Eublepharis macularius (Leopard gecko) | 20,469 | 16,165 | 1,379 | 160 | |
Amphibians | ||||||
Anura | ||||||
xla | Xenopus laevis (African clawed frog) | Ref | 34,476 | 24,652 | 1,389 | 415 |
xtr | Xenopus tropicalis (tropical clawed frog) | Ref | 21,827 | 16,277 | 1,648 | 431 |
npr | Nanorana parkeri (Xizang Plateau frog) | 18,958 | 14,902 | 25 | 17 | |
rtem | Rana temporaria (common frog) | 23,707 | 16,307 | 5,753 | 295 | |
bbuf | Bufo bufo (common toad) | 21,517 | 16,017 | 1,616 | 282 | |
bgar | Bufo gargarizans (Asiatic toad) | 22,033 | 15,890 | 1,694 | 288 | |
Caudata | ||||||
pwl | Pleurodeles waltl (Iberian ribbed newt) | 22,339 | 16,701 | 6,160 | ||
Gymnophiona | ||||||
muo | Microcaecilia unicolor | 20,868 | 16,302 | 673 | 134 | |
gsh | Geotrypetes seraphini (Gaboon caecilian) | 19,223 | 15,257 | 608 | 133 | |
Fishes | ||||||
Cypriniformes | ||||||
dre | Danio rerio (zebrafish) | Ref | 27,249 | 17,580 | 4,771 | 210 |
srx | Sinocyclocheilus rhinocerous | 44,364 | 31,766 | 24 | 19 | |
sanh | Sinocyclocheilus anshuiensis | 42,658 | 31,481 | 24 | 18 | |
sgh | Sinocyclocheilus grahami (golden-line barbel) | 45,912 | 31,483 | 24 | 19 | |
ccar | Cyprinus carpio (common carp) | 43,531 | 28,233 | 1,253 | 19 | |
caua | Carassius auratus (goldfish) | 53,052 | 37,654 | 9,075 | 290 | |
cgib | Carassius gibelio (silver crucian carp) | 43,901 | 31,229 | 26,707 | 166 | |
ptet | Puntigrus tetrazona (Sumatra barb) | 25,865 | 18,678 | 2,220 | 103 | |
lroh | Labeo rohita (rohu) | 26,277 | 18,129 | 464 | 105 | |
omc | Onychostoma macrolepis | 26,202 | 17,906 | 817 | 111 | |
pprm | Pimephales promelas (fathead minnow) | 26,629 | 18,409 | 3,202 | 184 | |
rkg | Rhinichthys klamathensis goyatoka (western speckled dace) | 23,703 | 16,855 | 3,375 | ||
mamb | Megalobrama amblycephala (Wuchang bream) | 29,877 | 19,115 | 517 | 196 | |
cide | Ctenopharyngodon idella (grass carp) | 25,130 | 18,122 | 542 | 131 | |
cery | Chanodichthys erythropterus (predatory carp) | 26,703 | 18,524 | 1,774 | ||
masi | Myxocyprinus asiaticus (Chinese sucker) | 39,345 | 30,064 | 708 | 155 | |
tros | Triplophysa rosa | 24,185 | 17,208 | 321 | 102 | |
tdw | Triplophysa dalaica | 24,283 | 17,453 | 1,461 | ||
manu | Misgurnus anguillicaudatus (oriental weatherfish) | 27,957 | 18,445 | 2,793 | 86 | |
pdab | Paramisgurnus dabryanus (large-scale loach) | 34,171 | 23,594 | 14,281 | ||
Siluriformes | ||||||
ipu | Ictalurus punctatus (channel catfish) | 23,964 | 17,815 | 1,646 | 188 | |
ifu | Ictalurus furcatus (blue catfish) | 23,168 | 17,060 | 561 | 124 | |
phyp | Pangasianodon hypophthalmus (striped catfish) | 21,669 | 16,888 | 322 | 195 | |
smeo | Silurus meridionalis (southern catfish) | 22,599 | 16,874 | 487 | 188 | |
tfd | Tachysurus fulvidraco (yellow catfish) | 23,998 | 17,542 | 3,102 | 163 | |
tvc | Tachysurus vachellii | 22,890 | 17,253 | 554 | ||
cgar | Clarias gariepinus (North African catfish) | 24,297 | 18,070 | 8,086 | ||
ngra | Neoarius graeffei (lesser salmon catfish) | 24,873 | 17,913 | 3,306 | ||
trn | Trichomycterus rosablanca | 22,952 | 16,990 | 5,011 | ||
Characiformes | ||||||
amex | Astyanax mexicanus (Mexican tetra) | 26,736 | 18,359 | 10,871 | ||
cmao | Colossoma macropomum (tambaqui) | 26,670 | 18,952 | 714 | 113 | |
Gymnotiformes | ||||||
eee | Electrophorus electricus (electric eel) | 22,026 | 17,152 | 215 | 151 | |
other Teleostei | ||||||
char | Clupea harengus (Atlantic herring) | 26,665 | 18,517 | 748 | 139 | |
spil | Sardina pilchardus (sardine) | 26,477 | 18,711 | 3,122 | ||
tru | Takifugu rubripes (torafugu) | 22,076 | 17,419 | 953 | 262 | |
tfs | Takifugu flavidus (sansaifugu) | 21,500 | 16,686 | 673 | 78 | |
tng | Tetraodon nigroviridis (spotted green pufferfish) | 27,931 | 14,367 | 24 | 24 | |
lco | Larimichthys crocea (large yellow croaker) | 23,367 | 17,133 | 458 | 192 | |
ncc | Notothenia coriiceps (black rockcod) | 24,789 | 13,937 | 24 | 16 | |
tben | Trematomus bernacchii (emerald rockcod) | 25,524 | 18,469 | 656 | ||
cgob | Cottoperca gobio | 21,272 | 16,778 | 778 | 181 | |
pgeo | Pseudochaenichthys georgianus (South Georgia icefish) | 23,496 | 16,899 | 761 | ||
gacu | Gymnodraco acuticeps | 24,925 | 17,153 | 604 | ||
emac | Eleginops maclovinus (Patagonian blennie) | 22,649 | 17,391 | 483 | ||
ely | Epinephelus lanceolatus (giant grouper) | 24,178 | 18,510 | 335 | 215 | |
efo | Epinephelus fuscoguttatus (brown-marbled grouper) | 23,879 | 18,129 | 397 | 227 | |
plep | Plectropomus leopardus (leopard coralgrouper) | 25,802 | 17,552 | 439 | 209 | |
sluc | Sander lucioperca (pikeperch) | 24,727 | 18,606 | 516 | 217 | |
ecra | Etheostoma cragini (Arkansas darter) | 21,827 | 16,651 | 315 | 181 | |
esp | Etheostoma spectabile (orangethroat darter) | 22,341 | 16,814 | 2,354 | 237 | |
pflv | Perca flavescens (yellow perch) | 23,749 | 18,053 | 572 | 211 | |
gat | Gasterosteus aculeatus (three-spined stickleback) | 22,585 | 17,590 | 916 | 174 | |
ppug | Pungitius pungitius (ninespine stickleback) | 22,158 | 17,511 | 5,257 | 190 | |
afb | Anoplopoma fimbria (sablefish) | 22,530 | 17,912 | 2,108 | 127 | |
clum | Cyclopterus lumpus (lumpfish) | 21,480 | 17,107 | 1,049 | 108 | |
pswi | Pseudoliparis swirei (Mariana hadal snailfish) | 21,161 | 16,289 | 717 | ||
cana | Clinocottus analis (woolly sculpin) | 21,958 | 17,512 | 1,538 | ||
cve | Cebidichthys violaceus (monkeyface prickleback) | 21,905 | 17,102 | 1,895 | ||
msam | Micropterus salmoides (largemouth bass) | 27,179 | 19,933 | 1,647 | 213 | |
schu | Siniperca chuatsi (mandarin fish) | 22,572 | 17,511 | 639 | 105 | |
cud | Cheilinus undulatus (humphead wrasse) | 23,316 | 17,985 | 386 | 204 | |
spul | Semicossyphus pulcher (California sheephead) | 22,635 | 17,971 | 4,367 | ||
lmix | Labrus mixtus (cuckoo wrasse) | 22,740 | 17,733 | 8,191 | ||
alat | Acanthopagrus latus (yellowfin seabream) | 23,773 | 18,364 | 764 | 202 | |
astr | Antennarius striatus (striated frogfish) | 21,475 | 17,366 | 2,206 | ||
mze | Maylandia zebra (zebra mbuna) | 25,898 | 19,150 | 820 | 243 | |
onl | Oreochromis niloticus (Nile tilapia) | 29,550 | 19,781 | 1,306 | 216 | |
oau | Oreochromis aureus (blue tilapia) | 27,686 | 19,748 | 783 | 191 | |
ola | Oryzias latipes (Japanese medaka) | Ref | 22,071 | 16,886 | 627 | 309 |
oml | Oryzias melastigma (Indian medaka) | 23,519 | 17,471 | 255 | 162 | |
csai | Cololabis saira (Pacific saury) | 23,923 | 17,888 | 12,387 | ||
xma | Xiphophorus maculatus (southern platyfish) | 23,238 | 17,853 | 371 | 181 | |
xco | Xiphophorus couchianus (Monterrey platyfish) | 22,784 | 17,644 | 296 | 169 | |
xhe | Xiphophorus hellerii (green swordtail) | 23,921 | 18,148 | 575 | 160 | |
pret | Poecilia reticulata (guppy) | 22,842 | 17,370 | 24 | 20 | |
pfor | Poecilia formosa (Amazon molly) | 25,338 | 18,637 | |||
plai | Poecilia latipinna (sailfin molly) | 25,059 | 18,074 | |||
pmei | Poecilia mexicana (shortfin molly) | 25,189 | 18,133 | |||
gaf | Gambusia affinis (western mosquitofish) | 23,148 | 17,735 | 456 | 178 | |
pprl | Poeciliopsis prolifica (blackstripe livebearer) | 23,101 | 17,686 | 646 | ||
cvg | Cyprinodon variegatus (sheepshead minnow) | 23,277 | 17,428 | 24 | 20 | |
ctul | Cyprinodon tularosa (White Sands pupfish) | 23,992 | 17,651 | 369 | 175 | |
gmu | Girardinichthys multiradiatus (darkedged splitfin) | 23,723 | 18,177 | 325 | 152 | |
nfu | Nothobranchius furzeri (turquoise killifish) | 22,207 | 16,924 | 25 | 16 | |
kmr | Kryptolebias marmoratus (mangrove rivulus) | 22,200 | 17,259 | 219 | 164 | |
alim | Austrofundulus limnaeus (annual killifish) | 23,805 | 17,426 | |||
nwh | Nematolebias whitei (Rio pearlfish) | 21,341 | 16,230 | 242 | 136 | |
aoce | Amphiprion ocellaris (clown anemonefish) | 23,035 | 16,780 | 423 | 175 | |
eja | Embiotoca jacksoni (black perch) | 22,292 | 17,598 | 436 | ||
bfre | Brachyistius frenatus (kelp perch) | 21,193 | 17,088 | 363 | ||
mcep | Mugil cephalus (flathead mullet) | 23,232 | 17,526 | 2,073 | 176 | |
csem | Cynoglossus semilaevis (tongue sole) | 21,271 | 16,649 | 24 | 18 | |
pov | Paralichthys olivaceus (Japanese flounder) | 23,126 | 16,935 | 24 | 20 | |
ssen | Solea senegalensis (Senegalese sole) | 23,383 | 18,201 | 1,587 | 213 | |
ssoe | Solea solea (common sole) | 22,383 | 17,713 | 10,292 | ||
hhip | Hippoglossus hippoglossus (Atlantic halibut) | 22,234 | 17,733 | 698 | 211 | |
hsp | Hippoglossus stenolepis (Pacific halibut) | 21,933 | 17,460 | 2,382 | 221 | |
pplt | Pleuronectes platessa (European plaice) | 22,945 | 17,763 | 6,331 | ||
smau | Scophthalmus maximus (turbot) | 21,619 | 17,320 | 1,009 | ||
lcf | Lates calcarifer (barramundi perch) | 25,071 | 19,039 | 2,634 | 216 | |
sdu | Seriola dumerili (greater amberjack) | 22,018 | 17,772 | 24 | 19 | |
slal | Seriola lalandi dorsalis (Yellowtail amberjack) | 25,560 | 18,270 | 457 | 204 | |
xgl | Xiphias gladius (swordfish) | 21,362 | 17,452 | 511 | 203 | |
hcq | Hippocampus comes (tiger tail seahorse) | 21,184 | 16,216 | 24 | 19 | |
sscv | Syngnathus scovelli (Gulf pipefish) | 19,665 | 15,238 | 3,409 | 82 | |
sbia | Syngnathoides biaculeatus (alligator pipefish) | 19,565 | 15,635 | 361 | ||
pee | Phycodurus eques (leafy seadragon) | 19,538 | 15,839 | 651 | ||
ptao | Phyllopteryx taeniolatus (common seadragon) | 19,926 | 15,907 | 489 | ||
bpec | Boleophthalmus pectinirostris (great blue-spotted mudskipper) | 21,404 | 16,676 | 24 | 21 | |
malb | Monopterus albus (swamp eel) | 21,356 | 16,736 | 24 | 17 | |
bspl | Betta splendens (Siamese fighting fish) | 22,791 | 17,457 | 739 | 179 | |
sjo | Scomber japonicus (chub mackerel) | 23,586 | 18,329 | 2,724 | ||
ssco | Scomber scombrus (Atlantic mackerel) | 22,929 | 18,041 | 2,113 | ||
gmh | Gadus morhua (Atlantic cod) | 23,485 | 17,360 | 1,921 | ||
sasa | Salmo salar (Atlantic salmon) | 48,679 | 31,535 | 24 | 24 | |
stru | Salmo trutta (river trout) | 42,405 | 30,508 | 3,989 | 305 | |
otw | Oncorhynchus tshawytscha (Chinook salmon) | 39,464 | 29,107 | 1,458 | 333 | |
omy | Oncorhynchus mykiss (rainbow trout) | 41,897 | 31,954 | 11,390 | 331 | |
ogo | Oncorhynchus gorbuscha (pink salmon) | 40,846 | 29,501 | 2,634 | 317 | |
one | Oncorhynchus nerka (sockeye salmon) | 37,942 | 26,316 | 729 | 290 | |
oki | Oncorhynchus kisutch (coho salmon) | 41,269 | 30,569 | 2,664 | 146 | |
oke | Oncorhynchus keta (chum salmon) | 40,661 | 28,983 | 1,643 | 158 | |
omm | Oncorhynchus masou masou (cherry salmon) | 40,543 | 29,768 | 1,600 | ||
ocla | Oncorhynchus clarkii lewisi (westslope cutthroat trout) | 41,663 | 31,711 | 5,143 | ||
salp | Salvelinus sp. IW2-2015 (Arctic char) | 36,435 | 25,802 | 865 | 324 | |
snh | Salvelinus namaycush (lake trout) | 39,192 | 29,306 | 2,462 | 331 | |
cclu | Coregonus clupeaformis (lake whitefish) | 42,433 | 30,147 | 2,560 | ||
els | Esox lucius (northern pike) | 24,843 | 18,896 | 4,256 | 246 | |
sfm | Scleropages formosus (Asian bonytongue) | 23,537 | 18,760 | 431 | 194 | |
pki | Paramormyrops kingsleyae | 23,862 | 18,067 | 285 | 158 | |
aang | Anguilla anguilla (European eel) | 25,903 | 19,903 | 481 | 246 | |
arot | Anguilla rostrata (American eel) | 25,366 | 19,642 | 682 | ||
ccog | Conger conger (European conger) | 26,618 | 20,368 | 3,556 | ||
other Actinopterygii | ||||||
loc | Lepisosteus oculatus (spotted gar) | 18,784 | 14,165 | 24 | 18 | |
pspa | Polyodon spathula (Mississippi paddlefish) | 30,722 | 24,222 | 1,836 | 308 | |
arut | Acipenser ruthenus (sterlet) | 35,994 | 26,872 | 1,774 | 356 | |
psex | Polypterus senegalus (gray bichir) | 21,940 | 14,102 | 1,071 | 161 | |
Coelacanthiformes | ||||||
lcm | Latimeria chalumnae (coelacanth) | 20,945 | 14,941 | 24 | 24 | |
other Vertebrates | ||||||
Cartilaginous fishes | ||||||
cmk | Callorhinchus milii (elephant shark) | 17,193 | 12,589 | 508 | 187 | |
rtp | Rhincodon typus (whale shark) | 20,766 | 12,323 | 390 | 18 | |
cpla | Chiloscyllium plagiosum (whitespotted bambooshark) | 19,916 | 13,915 | 528 | 93 | |
hoc | Hemiscyllium ocellatum (epaulette shark) | 19,215 | 14,786 | 3,551 | ||
leri | Leucoraja erinaceus (little skate) | 18,970 | 13,844 | 413 | 94 | |
Jawless fishes | ||||||
pmrn | Petromyzon marinus (sea lamprey) | 17,580 | 11,909 | 651 | ||
lrj | Lethenteron reissneri (Far Eastern brook lamprey) | 19,027 | 12,437 | 667 | ||
other Chordates | ||||||
Cephalochordates | ||||||
bfo | Branchiostoma floridae (Florida lancelet) | 26,689 | 12,418 | 196 | 87 | |
bbel | Branchiostoma belcheri (Belcher's lancelet) | 23,868 | 12,064 | 24 | 5 | |
Tunicates | ||||||
cin | Ciona intestinalis (yellow sea squirt) | 13,713 | 7,652 | 428 | 56 | |
sclv | Styela clava (leathery sea squirt) | 19,966 | 9,858 | 306 | 44 | |
other Deuterostomes | ||||||
Echinoderms | ||||||
spu | Strongylocentrotus purpuratus (purple sea urchin) | 27,447 | 11,877 | 831 | 120 | |
lpic | Lytechinus pictus (painted urchin) | 24,732 | 10,170 | 321 | 29 | |
ajj | Apostichopus japonicus (Japanese sea cucumber) | 20,754 | 9,915 | 2,429 | ||
aplc | Acanthaster planci (crown-of-thorns starfish) | 16,481 | 8,993 | 24 | 5 | |
arun | Luidia clathrata (European starfish) | 16,079 | 9,165 | 327 | ||
aamu | Asterias amurensis (Northern Pacific seastar) | 16,932 | 9,858 | 336 | ||
afil | Amphiura filiformis | 30,736 | 13,326 | 735 | ||
ajc | Anneissia japonica (feather star) | 21,084 | 5,688 | 525 | 30 | |
Hemichordates | ||||||
sko | Saccoglossus kowalevskii (acorn worm) | 20,936 | 9,350 | 115 | 43 | |
pfll | Ptychodera flava | 31,795 | 13,432 | 674 | ||
Insects | ||||||
Diptera | ||||||
dme | Drosophila melanogaster (fruit fly) | Ref | 13,986 | 7,407 | 1,257 | 214 |
der | Drosophila erecta | 13,718 | 7,458 | 258 | 45 | |
dse | Drosophila sechellia | 14,129 | 6,587 | 737 | 68 | |
dsi | Drosophila simulans | 14,191 | 7,445 | 924 | 27 | |
dya | Drosophila yakuba | 14,837 | 7,673 | 1,124 | 143 | |
dan | Drosophila ananassae | 14,128 | 5,573 | 444 | 36 | |
dsr | Drosophila serrata | 14,338 | 7,786 | |||
dpo | Drosophila pseudoobscura | 14,330 | 7,779 | 340 | 43 | |
dpe | Drosophila persimilis | 14,397 | 8,032 | 223 | 40 | |
dmn | Drosophila miranda | 19,112 | 9,727 | 304 | 39 | |
dwi | Drosophila willistoni | 14,774 | 7,609 | 258 | 38 | |
dgr | Drosophila grimshawi | 12,825 | 6,599 | 273 | 26 | |
dmo | Drosophila mojavensis | 13,425 | 7,540 | 1,090 | 185 | |
daz | Drosophila arizonae | 12,476 | 7,152 | |||
dnv | Drosophila navojoa | 13,082 | 7,370 | 85 | 27 | |
dhe | Drosophila hydei | 13,282 | 7,715 | 311 | 38 | |
dvi | Drosophila virilis | 13,853 | 6,118 | 243 | 34 | |
ccat | Ceratitis capitata (Mediterranean fruit fly) | 12,563 | 6,852 | 107 | 35 | |
bod | Bactrocera oleae (olive fruit fly) | 12,968 | 6,859 | 129 | 34 | |
bdr | Bactrocera dorsalis (oriental fruit fly) | 14,607 | 7,020 | 195 | ||
rze | Rhagoletis zephyria (snowberry fruit fly) | 24,741 | 8,838 | |||
aoq | Anastrepha obliqua (West Indian fruit fly) | 14,366 | 7,025 | 1,160 | ||
alud | Anastrepha ludens (Mexican fruit fly) | 14,586 | 7,065 | 830 | ||
tda | Teleopsis dalmanni (Malaysian stalk-eyed fly) | 25,647 | 10,749 | 507 | 19 | |
mde | Musca domestica (house fly) | 17,480 | 8,551 | 302 | 40 | |
scac | Stomoxys calcitrans (stable fly) | 13,982 | 7,072 | |||
lcq | Lucilia cuprina (Australian sheep blowfly) | 13,927 | 6,827 | 111 | 37 | |
lsq | Lucilia sericata (common green bottle fly) | 14,704 | 7,172 | 254 | 39 | |
cvj | Calliphora vicina (urban bluebottle blowfly) | 13,778 | 6,926 | 337 | ||
gfs | Glossina fuscipes (tsetse fly) | 12,301 | 6,835 | 87 | ||
ecoe | Eupeodes corollae | 13,703 | 6,692 | 229 | 19 | |
clon | Condylostylus longicornis | 12,227 | 6,547 | 348 | ||
his | Hermetia illucens (black soldier fly) | 14,004 | 6,252 | 137 | 36 | |
aga | Anopheles gambiae (malaria mosquito) | Ref | 12,519 | 6,777 | 675 | |
acoz | Anopheles coluzzii | 12,592 | 7,239 | 618 | 31 | |
aara | Anopheles arabiensis | 12,601 | 7,028 | 1,289 | 33 | |
amer | Anopheles merus | 13,794 | 7,164 | 528 | 18 | |
aste | Anopheles stephensi (Asian malaria mosquito) | 12,692 | 6,968 | 1,297 | ||
amap | Anopheles maculipalpis | 11,533 | 6,645 | 684 | ||
afun | Anopheles funestus (African malaria mosquito) | 12,105 | 6,438 | 1,071 | 16 | |
amou | Anopheles moucheti | 11,885 | 6,388 | 1,354 | ||
aali | Anopheles albimanus | 11,565 | 5,884 | 256 | 14 | |
acos | Anopheles coustani | 12,032 | 6,889 | 1,690 | ||
aag | Aedes aegypti (yellow fever mosquito) | Ref | 14,626 | 8,256 | 25 | 9 |
aalb | Aedes albopictus (Asian tiger mosquito) | 26,124 | 12,642 | 631 | 52 | |
asua | Armigeres subalbatus | 19,040 | 8,234 | 377 | ||
cqu | Culex quinquefasciatus (southern house mosquito) | 18,896 | 8,564 | 3,770 | 188 | |
cpii | Culex pipiens pallens (northern house mosquito) | 16,297 | 7,833 | 246 | 21 | |
cns | Contarinia nasturtii (swede midge) | 14,889 | 7,357 | 64 | 17 | |
bcoo | Bradysia coprophila | 16,546 | 8,588 | 108 | 25 | |
lll | Lutzomyia longipalpis | 11,238 | 6,830 | 114 | ||
ppap | Phlebotomus papatasi | 11,610 | 6,843 | 247 | ||
Hymenoptera | ||||||
ame | Apis mellifera (honey bee) | Ref | 9,922 | 6,715 | 334 | 49 |
acer | Apis cerana (Asiatic honeybee) | 10,719 | 6,695 | 74 | 32 | |
alab | Apis laboriosa (Himalayan honeybee) | 9,783 | 6,633 | 76 | 33 | |
adr | Apis dorsata (giant honeybee) | 10,049 | 6,454 | 48 | 17 | |
aflr | Apis florea (little honeybee) | 10,417 | 6,468 | 74 | 24 | |
bim | Bombus impatiens (common eastern bumble bee) | 10,557 | 6,852 | 78 | 28 | |
bbif | Bombus bifarius (two-form bumblebee) | 11,148 | 6,851 | 124 | 29 | |
bvk | Bombus vosnesenskii (yellow-faced bumblebee) | 11,184 | 6,863 | 127 | 29 | |
bvan | Bombus vancouverensis nearcticus | 11,338 | 6,916 | 176 | 28 | |
bhun | Bombus huntii (Hunt bumble bee) | 11,088 | 7,034 | 678 | ||
bter | Bombus terrestris (buff-tailed bumblebee) | 10,581 | 6,886 | |||
baff | Bombus affinis (rusty patched bumble bee) | 10,718 | 6,802 | 379 | 26 | |
bpyo | Bombus pyrosoma | 10,600 | 6,773 | 77 | 28 | |
bpas | Bombus pascuorum (common carder bee) | 10,380 | 6,730 | 108 | ||
fvi | Frieseomelitta varia | 10,618 | 6,396 | 58 | ||
ccal | Ceratina calcarata (carpenter bee) | 11,173 | 6,841 | 49 | 23 | |
obb | Osmia bicornis bicornis (red mason bee) | 11,191 | 6,971 | 73 | 25 | |
olg | Osmia lignaria (orchard mason bee) | 10,556 | 6,529 | 74 | ||
mgen | Megalopta genalis | 10,425 | 6,608 | 92 | 23 | |
nmea | Nomia melanderi (Alkali bee) | 9,924 | 6,527 | 232 | 22 | |
cgig | Colletes gigas | 10,168 | 6,619 | 63 | 29 | |
soc | Solenopsis invicta (red fire ant) | 14,803 | 7,575 | 96 | 30 | |
mpha | Monomorium pharaonis (pharaoh ant) | 12,651 | 7,318 | 53 | 28 | |
aec | Acromyrmex echinatior (Panamanian leafcutter ant) | 11,219 | 7,202 | |||
acep | Atta cephalotes (leaf cutting ant) | 10,491 | 7,075 | |||
pbar | Pogonomyrmex barbatus (red harvester ant) | 11,317 | 7,028 | |||
vem | Vollenhovia emeryi | 14,883 | 7,448 | 24 | 7 | |
cobs | Cardiocondyla obscurior | 11,040 | 6,842 | 250 | ||
tln | Temnothorax longispinosus | 13,784 | 7,809 | 60 | ||
hst | Harpegnathos saltator (Jerdon's jumping ant) | 12,642 | 7,426 | 109 | 27 | |
dqu | Dinoponera quadriceps | 11,048 | 7,127 | |||
cfo | Camponotus floridanus (Florida carpenter ant) | 12,512 | 7,747 | 66 | 29 | |
fex | Formica exsecta (narrow-headed ant) | 12,081 | 7,115 | 63 | 27 | |
pmec | Polyergus mexicanus | 11,776 | 6,994 | 337 | ||
lhu | Linepithema humile (Argentine ant) | 13,534 | 7,230 | 128 | 9 | |
pgc | Pseudomyrmex gracilis (graceful twig ant) | 11,572 | 7,132 | |||
obo | Ooceraea biroi (clonal raider ant) | 11,927 | 7,080 | 152 | 29 | |
pcf | Polistes canadensis | 9,876 | 6,680 | |||
pfuc | Polistes fuscatus (common paper wasp) | 10,694 | 6,832 | 285 | 30 | |
vps | Vespula pensylvanica (western yellowjacket) | 9,936 | 6,679 | 36 | 21 | |
vcrb | Vespa crabro (European hornet) | 10,204 | 6,609 | 124 | 17 | |
vve | Vespa velutina (Asian hornet) | 10,072 | 6,759 | 109 | ||
nvi | Nasonia vitripennis (jewel wasp) | 13,602 | 7,298 | 361 | 57 | |
csol | Ceratosolen solmsi marchali (fig wasp) | 9,663 | 6,308 | |||
tpre | Trichogramma pretiosum | 12,773 | 7,020 | 103 | 26 | |
lht | Leptopilina heterotoma | 14,450 | 5,682 | 122 | 27 | |
lbd | Leptopilina boulardi | 13,647 | 6,227 | 112 | 25 | |
mdl | Microplitis demolitor | 12,144 | 6,987 | |||
cglo | Cotesia glomerata | 14,119 | 6,956 | 83 | 34 | |
fas | Fopius arisanus | 10,991 | 6,691 | |||
dam | Diachasma alloeum | 12,351 | 6,907 | 91 | 34 | |
agif | Aphidius gifuensis | 12,683 | 7,314 | 164 | 45 | |
cins | Chelonus insularis | 10,548 | 4,768 | 98 | 22 | |
vcan | Venturia canescens | 11,831 | 6,224 | 303 | 23 | |
ccin | Cephus cinctus (wheat stem sawfly) | 11,511 | 6,874 | 92 | 32 | |
dsm | Diprion similis | 11,030 | 5,946 | 869 | 27 | |
npt | Neodiprion pinetum (white pine sawfly) | 11,943 | 6,175 | 622 | 31 | |
nfb | Neodiprion fabricii | 11,597 | 6,159 | 513 | 30 | |
nlo | Neodiprion lecontei (redheaded pine sawfly) | 11,969 | 6,247 | 956 | 32 | |
nvg | Neodiprion virginianus | 11,693 | 6,172 | 425 | 32 | |
aroa | Athalia rosae (coleseed sawfly) | 11,393 | 6,381 | 485 | ||
Coleoptera | ||||||
tca | Tribolium castaneum (red flour beetle) | Ref | 12,881 | 7,633 | 244 | 36 |
tmol | Tenebrio molitor (yellow mealworm) | 14,259 | 8,197 | 353 | ||
dpa | Dendroctonus ponderosae (mountain pine beetle) | 12,777 | 7,072 | 68 | 27 | |
esim | Euwallacea similis | 11,234 | 6,956 | 146 | ||
efor | Euwallacea fornicatus (polyphagous shot-hole borer) | 10,686 | 6,768 | 247 | ||
soy | Sitophilus oryzae (rice weevil) | 15,057 | 7,395 | 133 | 35 | |
agrg | Anthonomus grandis grandis (boll weevil) | 13,112 | 6,413 | 367 | 26 | |
atd | Aethina tumida (small hive beetle) | 13,131 | 7,124 | 786 | 13 | |
cset | Coccinella septempunctata (seven-spotted ladybird) | 14,769 | 7,273 | 256 | 34 | |
haxr | Harmonia axyridis (harlequin ladybird) | 13,899 | 7,410 | 1,725 | ||
agb | Anoplophora glabripennis (Asian longhorned beetle) | 14,828 | 7,614 | 121 | 41 | |
ldc | Leptinotarsa decemlineata (Colorado potato beetle) | 14,000 | 7,153 | 145 | 38 | |
dvv | Diabrotica virgifera virgifera (western corn rootworm) | 19,526 | 8,085 | 380 | ||
nvl | Nicrophorus vespilloides (burying beetle) | 12,642 | 7,358 | |||
dcor | Dalotia coriaria (greenhouse rove beetle) | 12,335 | 1,670 | 72 | ||
apln | Agrilus planipennis (emerald ash borer) | 13,371 | 7,459 | 77 | 35 | |
ppyr | Photinus pyralis (common eastern firefly) | 20,647 | 9,069 | 107 | 24 | |
otu | Onthophagus taurus (bull-headed dung beetle) | 14,016 | 7,041 | 119 | 21 | |
Lepidoptera | ||||||
bmor | Bombyx mori (domestic silkworm) | Ref | 13,465 | 7,304 | 677 | 49 |
bman | Bombyx mandarina (wild silkworm) | 12,794 | 7,084 | 337 | 51 | |
msex | Manduca sexta (tobacco hornworm) | 15,967 | 8,226 | 406 | 44 | |
dpl | Danaus plexippus (monarch butterfly) | 15,245 | 6,753 | 24 | 10 | |
bany | Bicyclus anynana (squinting bush brown) | 13,577 | 7,062 | 282 | 40 | |
mju | Maniola jurtina (meadow brown) | 13,777 | 6,850 | 139 | 23 | |
niq | Nymphalis io (European peacock) | 12,136 | 6,184 | 320 | 35 | |
vcd | Vanessa cardui (painted lady) | 13,223 | 6,886 | 315 | 25 | |
mcix | Melitaea cinxia (Glanville fritillary) | 13,771 | 6,791 | 223 | 23 | |
pmac | Papilio machaon (common yellow swallowtail) | 13,871 | 7,326 | 24 | 10 | |
ppot | Papilio polytes (common Mormon) | 12,178 | 6,794 | 24 | 10 | |
pxu | Papilio xuthus (Asian swallowtail) | 12,617 | 7,173 | 24 | 10 | |
bphi | Battus philenor (pipe-vine swallowtail) | 12,267 | 7,246 | 2,018 | ||
prap | Pieris rapae (cabbage white) | 12,147 | 7,139 | 248 | 45 | |
pbx | Pieris brassicae (large cabbage white) | 11,885 | 5,874 | 943 | 34 | |
pnap | Pieris napi (green-veined white) | 12,823 | 5,877 | 303 | 11 | |
zce | Zerene cesonia (dogface butterfly) | 11,924 | 7,241 | 118 | 24 | |
ccrc | Colias croceus (clouded yellow) | 13,592 | 5,965 | 237 | 31 | |
lsin | Leptidea sinapis (Wood White) | 12,469 | 6,563 | 484 | 34 | |
aage | Aricia agestis (brown argus) | 12,987 | 7,101 | 223 | ||
haw | Helicoverpa armigera (cotton bollworm) | 14,441 | 7,619 | 764 | 18 | |
hze | Helicoverpa zea (corn earworm) | 14,933 | 7,128 | 185 | 40 | |
tnl | Trichoplusia ni (cabbage looper) | 15,102 | 7,969 | 368 | 58 | |
sliu | Spodoptera litura (tobacco cutworm) | 14,745 | 7,472 | 24 | 10 | |
ofu | Ostrinia furnacalis (Asian corn borer) | 15,396 | 7,312 | 168 | 34 | |
onu | Ostrinia nubilalis (European corn borer) | 13,840 | 7,381 | 241 | ||
atra | Amyelois transitella (navel orangeworm) | 13,876 | 7,442 | 451 | ||
gmw | Galleria mellonella (greater wax moth) | 13,604 | 7,395 | 172 | ||
pxy | Plutella xylostella (diamondback moth) | 13,984 | 6,266 | 195 | 24 | |
pgw | Pectinophora gossypiella (pink bollworm) | 14,107 | 6,936 | 166 | 23 | |
lgly | Leguminivora glycinivorella (soybean pod borer) | 15,681 | 7,273 | 143 | ||
cstb | Cydia strobilella (spruce-seed moth) | 14,042 | 7,517 | 148 | ||
other Insecta | ||||||
cfel | Ctenocephalides felis (cat flea) | 18,878 | 7,060 | 1,088 | 49 | |
ccrn | Chrysoperla carnea | 12,985 | 6,773 | 1,389 | 27 | |
api | Acyrthosiphon pisum (pea aphid) | 17,681 | 8,020 | 366 | 68 | |
dnx | Diuraphis noxia (Russian wheat aphid) | 12,390 | 6,705 | 24 | 10 | |
ags | Aphis gossypii (cotton aphid) | 14,853 | 6,574 | 148 | 40 | |
rmd | Rhopalosiphum maidis (corn leaf aphid) | 12,060 | 7,258 | 136 | 42 | |
acoo | Adelges cooleyi (spruce gall adelgid) | 13,556 | 6,861 | 158 | 21 | |
dvt | Daktulosphaira vitifoliae (grape phylloxera) | 14,650 | 6,130 | 107 | ||
btab | Bemisia tabaci (sweet potato whitefly) | 13,914 | 7,316 | 24 | 6 | |
dci | Diaphorina citri (Asian citrus psyllid) | 20,095 | 6,340 | 206 | 48 | |
clec | Cimex lectularius (bed bug) | 11,949 | 7,011 | 169 | 49 | |
hhal | Halyomorpha halys (brown marmorated stink bug) | 14,486 | 7,173 | 201 | 42 | |
nlu | Nilaparvata lugens (brown planthopper) | 18,139 | 8,212 | 254 | 48 | |
hvi | Homalodisca vitripennis (glassy-winged sharpshooter) | 19,904 | 8,122 | 218 | 25 | |
mqu | Macrosteles quadrilineatus (aster leafhopper) | 21,979 | 10,064 | 282 | ||
phu | Pediculus humanus corporis (human body louse) | 10,773 | 6,264 | |||
foc | Frankliniella occidentalis (western flower thrips) | 16,529 | 7,236 | 87 | 41 | |
tpal | Thrips palmi (melon thrips) | 14,332 | 7,407 | 121 | ||
zne | Zootermopsis nevadensis (dampwood termite) | 12,381 | 7,409 | 24 | 6 | |
csec | Cryptotermes secundus (drywood termite) | 13,170 | 7,544 | 109 | 32 | |
sgre | Schistocerca gregaria (desert locust) | 19,799 | 6,434 | 13,877 | 49 | |
bror | Bacillus rossius redtenbacheri | 14,448 | 7,324 | 2,225 | ||
iel | Ischnura elegans (blue-tailed damselfly) | 15,994 | 7,031 | 367 | 29 | |
hamr | Hetaerina americana (American ruby spot damselfly) | 11,196 | 6,865 | 2,562 | ||
other Arthropods | ||||||
Springtails | ||||||
fcd | Folsomia candida | 20,251 | 8,045 | |||
Crustaceans | ||||||
dpx | Daphnia pulex (common water flea) | 30,603 | 7,789 | 23 | 23 | |
dmk | Daphnia magna (water flea) | 16,891 | 8,080 | 924 | 34 | |
dpz | Daphnia pulicaria | 16,865 | 6,766 | 2,988 | 23 | |
afra | Artemia franciscana | 15,504 | 7,521 | 498 | ||
pvm | Penaeus vannamei (Pacific white shrimp) | 24,987 | 8,806 | 570 | 55 | |
pja | Penaeus japonicus (kuruma prawn) | 22,301 | 9,217 | 349 | 44 | |
pchn | Penaeus chinensis (fleshy prawn) | 20,076 | 8,563 | 419 | 44 | |
pmoo | Penaeus monodon (black tiger shrimp) | 24,011 | 7,014 | 577 | 31 | |
hame | Homarus americanus (American lobster) | 22,368 | 8,402 | 953 | 47 | |
pcla | Procambarus clarkii (red swamp crayfish) | 37,059 | 9,277 | 2,096 | 30 | |
cqd | Cherax quadricarinatus (Australian red claw crayfish) | 17,161 | 6,552 | 206 | 11 | |
ptru | Portunus trituberculatus (swimming crab) | 17,292 | 8,096 | 275 | 47 | |
esn | Eriocheir sinensis (Chinese mitten crab) | 19,628 | 7,222 | 545 | 30 | |
mnz | Macrobrachium nipponense (oriental river prawn) | 24,778 | 8,136 | 208 | ||
mrj | Macrobrachium rosenbergii (giant freshwater prawn) | 23,057 | 7,778 | 574 | ||
porn | Panulirus ornatus (ornate spiny lobster) | 16,552 | 7,539 | 228 | ||
hazt | Hyalella azteca | 17,163 | 6,929 | 93 | 21 | |
eaf | Eurytemora affinis | 20,729 | 8,154 | 81 | 25 | |
lsm | Lepeophtheirus salmonis (salmon louse) | 13,322 | 6,909 | 263 | 15 | |
tcf | Tigriopus californicus (tidepool copepod) | 15,364 | 7,020 | 56 | ||
ppoi | Pollicipes pollicipes (gooseneck barnacle) | 20,420 | 9,952 | 157 | ||
Chelicerates | ||||||
isc | Ixodes scapularis (black-legged tick) | 26,659 | 2,511 | 581 | 8 | |
dsv | Dermacentor silvarum | 23,419 | 9,635 | 782 | 37 | |
rsan | Rhipicephalus sanguineus (brown dog tick) | 22,523 | 9,756 | 388 | 24 | |
rmp | Rhipicephalus microplus (southern cattle tick) | 18,598 | 8,988 | 369 | 26 | |
vde | Varroa destructor (honeybee mite) | 10,241 | 6,327 | 24 | 6 | |
vja | Varroa jacobsoni | 10,521 | 6,362 | |||
tut | Tetranychus urticae (two-spotted spider mite) | 11,686 | 6,324 | 111 | 20 | |
dpte | Dermatophagoides pteronyssinus (European house dust mite) | 11,184 | 6,050 | 56 | 12 | |
dfr | Dermatophagoides farinae (American house dust mite) | 10,172 | 6,095 | 50 | 11 | |
cscu | Centruroides sculpturatus (bark scorpion) | 24,591 | 9,762 | 159 | 33 | |
cvs | Centruroides vittatus (striped bark scorpion) | 18,579 | 9,368 | 222 | ||
ptep | Parasteatoda tepidariorum (common house spider) | 18,394 | 7,941 | 123 | 30 | |
abru | Argiope bruennichi (wasp spider) | 18,374 | 8,862 | 787 | ||
udv | Uloborus diversus | 15,750 | 8,353 | 290 | 16 | |
sdm | Stegodyphus dumicola | 20,729 | 8,217 | 308 | 40 | |
lpol | Limulus polyphemus (Atlantic horseshoe crab) | 22,873 | 9,907 | 24 | 2 | |
other Ecdysozoa | ||||||
Tardigrades | ||||||
pmeo | Paramacrobiotus metropolitanus | 20,465 | 6,179 | 140 | 8 | |
Nematodes | ||||||
cel | Caenorhabditis elegans (nematode) | Ref | 19,983 | 6,264 | 24,827 | 460 |
cbr | Caenorhabditis briggsae (nematode) | 21,934 | 6,094 | 52 | 20 | |
crq | Caenorhabditis remanei (nematode) | 26,177 | 5,790 | |||
nai | Necator americanus (New World hookworm) | 19,165 | 4,444 | 110 | 7 | |
bmy | Brugia malayi (filaria) | 10,917 | 3,890 | 264 | 12 | |
loa | Loa loa (eye worm) | 14,915 | 5,016 | 37 | 23 | |
tsp | Trichinella spiralis | 16,392 | 4,318 | 24 | 17 | |
other Protostomes | ||||||
Annelids | ||||||
hro | Helobdella robusta | 23,426 | 6,726 | |||
Mollusks | ||||||
lgi | Lottia gigantea (owl limpet) | 23,818 | 8,115 | |||
pvul | Patella vulgata (common limpet) | 16,057 | 8,414 | 1,879 | ||
pcan | Pomacea canaliculata (golden apple snail) | 21,144 | 8,944 | 247 | 68 | |
lsax | Littorina saxatilis | 27,788 | 9,982 | 1,266 | ||
bgt | Biomphalaria glabrata (bloodfluke planorb) | 25,330 | 8,684 | 24 | 3 | |
gae | Gigantopelta aegis (peltospirid snail) | 22,556 | 10,303 | 514 | 71 | |
hrf | Haliotis rufescens (red abalone) | 31,184 | 12,461 | 1,803 | 54 | |
hrj | Haliotis rubra (blacklip abalone) | 29,738 | 12,739 | 438 | 58 | |
hasi | Haliotis asinina (tropical abalone) | 26,848 | 11,851 | 2,320 | ||
hcra | Haliotis cracherodii (black abalone) | 29,565 | 11,620 | 1,457 | ||
crg | Magallana gigas (Pacific oyster) | 26,085 | 10,430 | 329 | 34 | |
canu | Magallana angulata (Portugese oyster) | 29,822 | 10,444 | 470 | 19 | |
cvn | Crassostrea virginica (eastern oyster) | 34,596 | 12,335 | |||
oed | Ostrea edulis (European flat oyster) | 27,763 | 9,788 | 385 | 15 | |
myi | Mizuhopecten yessoensis (Yesso scallop) | 24,532 | 10,119 | 25 | 1 | |
pmax | Pecten maximus (king scallop) | 26,152 | 11,255 | 486 | 51 | |
airr | Argopecten irradians (bay scallop) | 25,634 | 10,409 | 458 | ||
mcaf | Mytilus californianus (California mussel) | 26,243 | 5,977 | 740 | 39 | |
mmer | Mercenaria mercenaria (northern quahog) | 38,330 | 11,254 | 177 | 42 | |
rphi | Ruditapes philippinarum (Manila clam) | 40,909 | 12,543 | 200 | ||
dpol | Dreissena polymorpha (zebra mussel) | 36,414 | 10,301 | 513 | 31 | |
maea | Mya arenaria (softshell) | 36,031 | 12,834 | 436 | ||
obi | Octopus bimaculoides (California two-spot octopus) | 15,684 | 8,061 | 558 | 38 | |
osn | Octopus sinensis (East Asian common octopus) | 18,886 | 9,491 | 1,301 | 59 | |
ljp | Liolophura japonica (common chiton) | 17,422 | 9,196 | 1,528 | ||
Brachiopoda | ||||||
lak | Lingula anatina | 27,068 | 11,665 | 193 | 60 | |
Flatworms | ||||||
smm | Schistosoma mansoni | 10,711 | 4,901 | 98 | 27 | |
shx | Schistosoma haematobium (urinary blood fluke) | 9,440 | 2,907 | 24 | 3 | |
ovi | Opisthorchis viverrini (Southeast Asian liver fluke) | 16,356 | 4,739 | |||
egl | Echinococcus granulosus (hydatid tapeworm) | 11,331 | 4,219 | 23 | 3 | |
Ribbon worms | ||||||
llon | Lineus longissimus (bootlace worm) | 17,976 | 8,678 | 881 | ||
other Eumetazoa | ||||||
Cnidarians | ||||||
nve | Nematostella vectensis (starlet sea anemone) | 23,845 | 9,887 | 1,269 | 43 | |
epa | Exaiptasia diaphana (Aiptasia) | 22,509 | 9,286 | 93 | 34 | |
aten | Actinia tenebrosa (Australian red waratah sea anemone) | 19,980 | 10,041 | 95 | 45 | |
adf | Acropora digitifera (stony coral) | 26,073 | 8,917 | 4 | 4 | |
amil | Acropora millepora | 30,136 | 9,702 | 516 | 27 | |
mcaz | Montipora capricornis (leaf plate montipora) | 32,425 | 10,997 | 2,365 | ||
mfoo | Montipora foliosa | 31,642 | 11,012 | 2,993 | ||
pdam | Pocillopora damicornis (lace coral) | 19,935 | 9,485 | 55 | 31 | |
spis | Stylophora pistillata (Smooth Cauliflower Coral) | 24,473 | 9,761 | 4 | 1 | |
dgt | Dendronephthya gigantea (soft corals) | 22,045 | 8,578 | 831 | 46 | |
xen | Xenia sp. Carnegie-2017 (soft corals) | 18,425 | 8,241 | 497 | 27 | |
hmg | Hydra vulgaris (swiftwater hydra) | 21,385 | 6,365 | 274 | 23 | |
hsy | Hydractinia symbiolongicarpus | 20,492 | 7,910 | 11,720 | 28 | |
res | Rhopilema esculentum | 14,864 | 7,118 | 119 | ||
Placozoans | ||||||
tad | Trichoplax adhaerens (placozoan) | 11,538 | 6,000 | 27 | 25 | |
other Metazoa | ||||||
Poriferans | ||||||
aqu | Amphimedon queenslandica (sponge) | 20,215 | 6,837 | 22 | 1 | |
Plants | ||||||
Eudicots | ||||||
Mustard family | ||||||
ath | Arabidopsis thaliana (thale cress) | Ref | 27,562 | 10,164 | 1,884 | 261 |
aly | Arabidopsis lyrata (lyrate rockcress) | 29,817 | 10,684 | 45 | 39 | |
crb | Capsella rubella (pink shepherd's-purse) | 26,526 | 10,272 | 576 | 173 | |
csat | Camelina sativa (false flax) | 82,652 | 29,864 | 45 | 39 | |
eus | Eutrema salsugineum (saltwater cress) | 26,615 | 9,988 | 38 | 37 | |
brp | Brassica rapa (field mustard) | 41,569 | 15,499 | 2,842 | 223 | |
bna | Brassica napus (rape) | 90,897 | 31,399 | 11,254 | 245 | |
boe | Brassica oleracea (wild cabbage) | 44,305 | 15,588 | |||
rsz | Raphanus sativus (radish) | 51,440 | 18,555 | 2,846 | 204 | |
Caper family | ||||||
thj | Tarenaya hassleriana (spider flower) | 27,481 | 11,526 | 46 | 36 | |
Papaya family | ||||||
cpap | Carica papaya (papaya) | 18,126 | 7,500 | 67 | 61 | |
Rue family | ||||||
cit | Citrus sinensis (Valencia orange) | Ref | 23,556 | 9,009 | 2,541 | 165 |
cic | Citrus x clementina (clementine) | 25,000 | 9,067 | |||
Sumac family | ||||||
pvy | Pistacia vera (pistachio) | 32,030 | 11,372 | 2,164 | 149 | |
minc | Mangifera indica (mango) | 32,154 | 13,451 | 1,176 | 144 | |
Mallow family | ||||||
tcc | Theobroma cacao (cacao) | 21,518 | 8,911 | 45 | 41 | |
gra | Gossypium raimondii | 34,039 | 13,271 | 3,546 | 176 | |
ghi | Gossypium hirsutum (upland cotton) | 67,586 | 25,535 | 12,719 | 257 | |
gab | Gossypium arboreum (tree cotton) | 34,532 | 13,407 | 80 | 65 | |
hsyr | Hibiscus syriacus (Rose-of-Sharon) | 64,995 | 25,620 | 2,054 | ||
dzi | Durio zibethinus (durian) | 35,915 | 15,166 | 45 | 40 | |
Myrtle family | ||||||
egr | Eucalyptus grandis (rose gum) | 33,352 | 11,386 | 1,067 | 135 | |
rarg | Rhodamnia argentea (silver malletwood) | 23,574 | 9,695 | 620 | ||
Pea family | ||||||
gmx | Glycine max (soybean) | Ref | 47,065 | 18,387 | 2,996 | 242 |
gsj | Glycine soja (wild soybean) | 47,201 | 18,332 | 2,127 | 206 | |
pvu | Phaseolus vulgaris (common bean) | 29,648 | 10,432 | 757 | ||
vra | Vigna radiata (mung bean) | 26,961 | 10,591 | |||
var | Vigna angularis (adzuki bean) | 27,320 | 10,608 | 1,118 | 57 | |
vun | Vigna unguiculata (cowpea) | 28,223 | 11,062 | 2,017 | 169 | |
vum | Vigna umbellata (ricebean) | 26,587 | 10,389 | 392 | ||
ccaj | Cajanus cajan (pigeon pea) | 29,045 | 11,023 | 588 | 134 | |
aprc | Abrus precatorius (Indian licorice) | 24,888 | 10,588 | 2,465 | 151 | |
mtr | Medicago truncatula (barrel medic) | Ref | 31,927 | 11,584 | 2,666 | 120 |
tpra | Trifolium pratense (red clover) | 33,610 | 12,107 | 3,310 | 114 | |
cam | Cicer arietinum (chickpea) | 24,818 | 10,030 | 33 | 33 | |
psat | Pisum sativum (pea) | 40,025 | 11,425 | 11,459 | 128 | |
vvo | Vicia villosa (hairy vetch) | 54,730 | 15,560 | 2,446 | ||
lja | Lotus japonicus | 32,752 | 9,848 | 1,634 | ||
adu | Arachis duranensis | 33,525 | 11,224 | 5,104 | 79 | |
aip | Arachis ipaensis | 37,716 | 11,106 | |||
ahf | Arachis hypogaea (peanut) | 65,994 | 21,825 | 28,639 | 162 | |
lang | Lupinus angustifolius (narrow-leaved blue lupine) | 33,884 | 14,223 | |||
pcin | Prosopis cineraria | 30,645 | 11,833 | 1,205 | 78 | |
Quillaja family | ||||||
qsa | Quillaja saponaria (soapbark tree) | 36,026 | 13,451 | |||
Rose family | ||||||
fve | Fragaria vesca (woodland strawberry) | 24,114 | 9,328 | 45 | 45 | |
aans | Argentina anserina (silverweed cinquefoil) | 19,620 | 8,265 | 1,280 | ||
rcn | Rosa chinensis (China rose) | 30,924 | 10,295 | 866 | 102 | |
pper | Prunus persica (peach) | 23,135 | 9,248 | 45 | 39 | |
pmum | Prunus mume (Japanese apricot) | 23,423 | 9,336 | 45 | 40 | |
pavi | Prunus avium (sweet cherry) | 25,841 | 9,661 | |||
pdul | Prunus dulcis (almond) | 23,151 | 9,415 | 522 | 115 | |
mdm | Malus domestica (apple) | Ref | 39,340 | 14,694 | 1,928 | 141 |
msyl | Malus sylvestris (European crab apple) | 37,480 | 14,519 | 2,110 | 95 | |
pxb | Pyrus x bretschneideri (Chinese white pear) | 34,996 | 14,499 | |||
pcox | Pyrus communis (pear) | 34,369 | 14,181 | 1,531 | ||
Buckthorn family | ||||||
zju | Ziziphus jujuba (Chinese jujube) | 25,201 | 9,204 | 3,574 | 143 | |
Mulberry family | ||||||
mnt | Morus notabilis | 21,745 | 8,895 | 723 | 144 | |
Hemp family | ||||||
csav | Cannabis sativa (hemp) | 28,747 | 8,846 | 2,341 | 81 | |
Cucumber family | ||||||
csv | Cucumis sativus (cucumber) | Ref | 20,040 | 8,787 | 500 | 165 |
cmo | Cucumis melo (muskmelon) | 20,741 | 8,594 | 2,944 | 88 | |
bhj | Benincasa hispida (wax gourd) | 21,088 | 8,669 | 1,210 | 147 | |
mcha | Momordica charantia (bitter melon) | 19,516 | 8,326 | 46 | 39 | |
cmax | Cucurbita maxima (winter squash) | 27,314 | 12,497 | 1,906 | 165 | |
cmos | Cucurbita moschata (crookneck pumpkin) | 27,899 | 12,590 | 793 | 165 | |
cpep | Cucurbita pepo subsp. pepo (vegetable marrow) | 29,243 | 13,006 | 763 | 127 | |
Spurge family | ||||||
rcu | Ricinus communis (castor bean) | Ref | 20,634 | 8,470 | 1,955 | 161 |
mean | Mercurialis annua (annual mercury) | 25,039 | 8,901 | 6,005 | ||
jcu | Jatropha curcas (Barbados nut) | 19,420 | 8,055 | 517 | 138 | |
hbr | Hevea brasiliensis (rubber tree) | 35,267 | 13,837 | 45 | 40 | |
mesc | Manihot esculenta (cassava) | 29,735 | 12,128 | 1,126 | 180 | |
Willow family | ||||||
pop | Populus trichocarpa (black cottonwood) | 29,617 | 12,767 | 755 | 182 | |
peu | Populus euphratica (Euphrates poplar) | 30,668 | 13,275 | 44 | 37 | |
palz | Populus alba (white poplar) | 30,634 | 13,002 | 734 | 198 | |
pnz | Populus nigra (Lombardy poplar) | 29,119 | 12,135 | 5,131 | ||
Walnut family | ||||||
jre | Juglans regia (English walnut) | 30,709 | 11,939 | 3,089 | 156 | |
cill | Carya illinoinensis (pecan) | 31,411 | 11,615 | 7,771 | 94 | |
Birch family | ||||||
cave | Corylus avellana (European hazelnut) | 26,896 | 10,259 | 624 | 85 | |
aglu | Alnus glutinosa (common alder) | 24,946 | 9,500 | 2,512 | ||
Beech family | ||||||
qsu | Quercus suber (cork oak) | 33,154 | 10,433 | 641 | 89 | |
qlo | Quercus lobata (valley oak) | 36,703 | 11,412 | 889 | 111 | |
Bittersweet family | ||||||
twl | Tripterygium wilfordii (thunder duke vine) | 31,432 | 12,871 | 1,947 | 124 | |
Grape family | ||||||
vvi | Vitis vinifera (wine grape) | Ref | 25,187 | 9,846 | 1,238 | 156 |
vri | Vitis riparia (riverbank grape) | 26,189 | 10,327 | 438 | 131 | |
Nightshade family | ||||||
sly | Solanum lycopersicum (tomato) | Ref | 28,611 | 10,513 | 6,570 | 200 |
spen | Solanum pennellii | 26,581 | 10,603 | 786 | 205 | |
sot | Solanum tuberosum (potato) | 28,463 | 11,000 | 268 | 39 | |
sstn | Solanum stenotomum | 29,808 | 11,208 | 880 | 135 | |
sdul | Solanum dulcamara (climbing nightshade) | 25,457 | 10,426 | 3,501 | ||
cann | Capsicum annuum (peppers) | 32,202 | 10,604 | 3,374 | 195 | |
lbb | Lycium barbarum (goji berry) | 34,339 | 11,679 | 2,447 | 79 | |
nta | Nicotiana tabacum (common tobacco) | 61,780 | 21,233 | 72 | 63 | |
nsy | Nicotiana sylvestris (wood tobacco) | 45,213 | 10,890 | 1,831 | 64 | |
nto | Nicotiana tomentosiformis | 42,736 | 10,853 | 2,135 | 40 | |
nau | Nicotiana attenuata (coyote tobacco) | 34,218 | 11,255 | 73 | 64 | |
Morning-glory family | ||||||
ini | Ipomoea nil (Japanese morning glory) | 35,267 | 11,815 | 69 | 66 | |
itr | Ipomoea triloba (trilobed morning glory) | 30,644 | 11,706 | 2,554 | 161 | |
Sesame family | ||||||
sind | Sesamum indicum (sesame) | 24,075 | 10,233 | 45 | 45 | |
Olive family | ||||||
oeu | Olea europaea var. sylvestris (wild olive) | 40,126 | 13,117 | 45 | ||
Lopseed family | ||||||
egt | Erythranthe guttata (spotted monkey flower) | 27,232 | 9,862 | |||
Mint family | ||||||
sspl | Salvia splendens (scarlet sage) | 55,405 | 21,898 | 2,079 | 203 | |
smil | Salvia miltiorrhiza (redroot sage) | 32,434 | 10,555 | 1,035 | 86 | |
shis | Salvia hispanica (chia) | 32,922 | 12,667 | 745 | ||
Acanthus family | ||||||
apan | Andrographis paniculata | 24,723 | 10,034 | 761 | 79 | |
Daisy family | ||||||
han | Helianthus annuus (common sunflower) | 57,237 | 14,407 | 4,723 | 211 | |
ecad | Erigeron canadensis (horseweed) | 28,703 | 10,728 | 488 | 141 | |
lsv | Lactuca sativa (garden lettuce) | 36,855 | 11,741 | 5,862 | 197 | |
ccav | Cynara cardunculus var. scolymus (artichoke) | 26,313 | 10,573 | 1,327 | 129 | |
Parsley family | ||||||
dcr | Daucus carota (carrot) | 33,079 | 11,546 | 1,519 | ||
Tea family | ||||||
csin | Camellia sinensis (tea plant) | 50,870 | 13,722 | 1,442 | 187 | |
Heath family | ||||||
rvl | Rhododendron vialii | 30,067 | 10,169 | 2,759 | 101 | |
Actinidiaceae | ||||||
aew | Actinidia eriantha (wild kiwifruit) | 36,654 | 15,181 | 1,680 | 101 | |
Ebony family | ||||||
dlt | Diospyros lotus (date-plum) | 24,080 | 9,855 | 1,219 | ||
Goosefoot family | ||||||
bvg | Beta vulgaris (sugar beet) | 24,491 | 8,270 | 31 | 30 | |
soe | Spinacia oleracea (spinach) | 28,771 | 8,379 | 2,745 | 169 | |
cqi | Chenopodium quinoa (quinoa) | 49,252 | 16,066 | 68 | 59 | |
Amaranth family | ||||||
atri | Amaranthus tricolor (tampala) | 24,770 | 9,544 | 4,750 | 86 | |
Ximeniaceae | ||||||
mof | Malania oleifera | 20,699 | 8,346 | 1,844 | 80 | |
Lotus family | ||||||
nnu | Nelumbo nucifera (sacred lotus) | 24,117 | 10,052 | 72 | 72 | |
Protea family | ||||||
ming | Macadamia integrifolia (macadamia nut) | 28,774 | 11,228 | 2,578 | 120 | |
tss | Telopea speciosissima (New South Wales waratah) | 27,481 | 11,197 | 1,040 | 107 | |
Poppy family | ||||||
psom | Papaver somniferum (opium poppy) | 63,018 | 18,788 | 3,176 | 219 | |
Monocots | ||||||
Grass family | ||||||
osa | Oryza sativa japonica (Japanese rice) | Ref | 29,429 | 10,125 | 3,149 | 65 |
dosa | Oryza sativa japonica (Japanese rice) (RAPDB) | 28,547 | 8,476 | 814 | ||
obr | Oryza brachyantha (malo sina) | 23,334 | 9,316 | 953 | 127 | |
ogl | Oryza glaberrima (African rice) | 27,018 | 9,932 | 2,050 | 97 | |
bdi | Brachypodium distachyon (stiff brome) | 25,535 | 9,680 | 894 | 148 | |
ats | Aegilops tauschii (wheat D) | 45,318 | 12,329 | |||
tdc | Triticum dicoccoides (wild emmer wheat) | 66,764 | 23,429 | 5,534 | 212 | |
taes | Triticum aestivum (bread wheat) | 103,870 | 34,996 | 9,925 | 266 | |
tua | Triticum urartu (red wild einkorn wheat) | 35,768 | 12,429 | 1,107 | 130 | |
lper | Lolium perenne (perennial ryegrass) | 38,554 | 11,550 | 3,295 | 123 | |
lrd | Lolium rigidum (rigid ryegrass) | 46,752 | 18,218 | 1,816 | 119 | |
sbi | Sorghum bicolor (sorghum) | 28,236 | 10,304 | 77 | 51 | |
zma | Zea mays (maize) | Ref | 34,177 | 12,411 | 3,535 | 176 |
mflo | Miscanthus floridulus | 69,627 | 22,193 | 3,789 | ||
sita | Setaria italica (foxtail millet) | 27,505 | 10,425 | 46 | 45 | |
svs | Setaria viridis (green foxtail) | 27,570 | 10,233 | 1,452 | 137 | |
pvir | Panicum virgatum (switchgrass) | 55,598 | 19,454 | 2,467 | 173 | |
phai | Panicum hallii (Hall's panicgrass) | 26,380 | 10,008 | 618 | 104 | |
paua | Phragmites australis (common reed) | 38,444 | 14,864 | 2,323 | ||
Palm family | ||||||
pda | Phoenix dactylifera (date palm) | 29,239 | 11,831 | 1,913 | 194 | |
egu | Elaeis guineensis (African oil palm) | 26,342 | 11,301 | 46 | 46 | |
Banana family | ||||||
mus | Musa acuminata (dessert banana) | 30,151 | 12,815 | 3,853 | ||
Ginger family | ||||||
zof | Zingiber officinale (ginger) | 68,154 | 25,527 | 4,671 | 69 | |
Orchid family | ||||||
dct | Dendrobium catenatum | 22,643 | 8,538 | 843 | 113 | |
peq | Phalaenopsis equestris | 20,154 | 8,140 | 46 | 36 | |
Asparagus family | ||||||
aof | Asparagus officinalis (garden asparagus) | 26,541 | 9,125 | 46 | 41 | |
other Core angiosperms | ||||||
Magnolia family | ||||||
msin | Magnolia sinica | 27,932 | 10,014 | 5,147 | ||
Birthwort family | ||||||
acak | Aristolochia californica | 24,584 | 10,713 | 4,959 | ||
Basal angiosperms | ||||||
Water-lily family | ||||||
ncol | Nymphaea colorata (blue-petal water lily) | 20,488 | 8,617 | 1,045 | 106 | |
Amborella family | ||||||
atr | Amborella trichopoda | 17,106 | 7,291 | 44 | 43 | |
other Seed plants | ||||||
Cypress family | ||||||
cjf | Cryptomeria japonica (Japanese cedar) | 41,227 | 13,277 | 12,544 | ||
other Vascular plants | ||||||
Ferns | ||||||
smo | Selaginella moellendorffii | 34,724 | 11,897 | 23 | 23 | |
other Land plants | ||||||
Mosses | ||||||
ppp | Physcomitrium patens (spreading earthmoss) | 20,454 | 9,223 | 375 | 114 | |
Green algae | ||||||
Chlorophyceae | ||||||
cre | Chlamydomonas reinhardtii | Ref | 17,819 | 3,761 | 56 | 16 |
vcn | Volvox carteri f. nagariensis | 14,434 | 3,809 | |||
mng | Monoraphidium neglectum | 16,734 | 3,216 | |||
Trebouxiophyceae | ||||||
csl | Coccomyxa subellipsoidea | 9,945 | 3,908 | 64 | 64 | |
cvr | Chlorella variabilis | 9,892 | 3,621 | 65 | 64 | |
apro | Auxenochlorella protothecoides | 7,127 | 3,112 | 62 | 61 | |
Mamiellophyceae | ||||||
olu | Ostreococcus lucimarinus | 7,603 | 3,321 | |||
ota | Ostreococcus tauri | 7,765 | 3,329 | 67 | 67 | |
bpg | Bathycoccus prasinos | 7,892 | 3,114 | 67 | 66 | |
mis | Micromonas commoda | 10,049 | 3,704 | 72 | 72 | |
mpp | Micromonas pusilla | 10,233 | 3,469 | |||
Red algae | ||||||
Bangiophyceae | ||||||
cme | Cyanidioschyzon merolae | 5,010 | 2,477 | 84 | 80 | |
gsl | Galdieria sulphuraria | 6,823 | 2,948 | 55 | 52 | |
Florideophyceae | ||||||
ccp | Chondrus crispus (carragheen) | 9,836 | 2,531 | 62 | 59 | |
Fungi | ||||||
Ascomycetes | ||||||
Saccharomycetes | ||||||
sce | Saccharomyces cerevisiae (budding yeast) | Ref | 6,021 | 3,957 | 428 | 365 |
seub | Saccharomyces eubayanus | 5,364 | 3,753 | |||
spao | Saccharomyces paradoxus | 5,538 | 3,919 | 27 | 1 | |
ago | Eremothecium gossypii | 4,776 | 3,436 | 461 | 429 | |
erc | Eremothecium cymbalariae | 4,432 | 3,193 | 151 | 149 | |
kla | Kluyveromyces lactis | Ref | 5,084 | 3,510 | 250 | 228 |
kmx | Kluyveromyces marxianus | 4,941 | 3,475 | 210 | 168 | |
lth | Lachancea thermotolerans | 5,092 | 3,561 | 292 | 282 | |
vpo | Vanderwaltozyma polyspora | 5,336 | 3,663 | 23 | 22 | |
zro | Zygosaccharomyces rouxii | 4,991 | 3,564 | 332 | 325 | |
cgr | Nakaseomyces glabratus | 5,269 | 3,648 | 264 | ||
ncs | Naumovozyma castellii | 5,589 | 3,860 | 278 | 278 | |
ndi | Naumovozyma dairenensis | 5,548 | 3,833 | 268 | 266 | |
tpf | Tetrapisispora phaffii | 5,250 | 3,709 | 210 | 210 | |
tbl | Henningerozyma blattae | 5,388 | 3,727 | 337 | 337 | |
tgb | Torulaspora globosa | 4,930 | 3,489 | 198 | 6 | |
tdl | Torulaspora delbrueckii | 4,972 | 3,563 | 204 | 204 | |
kaf | Kazachstania africana | 5,378 | 3,768 | 271 | 271 | |
kng | Huiozyma naganishii | 5,319 | 3,735 | 8 | 2 | |
zmk | Zygotorulaspora mrakii | 5,038 | 3,574 | 201 | 64 | |
slud | Saccharomycodes ludwigii | 5,026 | 2,444 | 68 | 33 | |
Pichiomycetes | ||||||
dha | Debaryomyces hansenii | 6,286 | 3,764 | 236 | 234 | |
pic | Scheffersomyces stipitis | 5,818 | 3,657 | 1 | ||
pgu | Meyerozyma guilliermondii | 5,920 | 3,590 | |||
spaa | Spathaspora passalidarum | 5,983 | 3,662 | |||
lel | Lodderomyces elongisporus | 5,630 | 3,274 | 100 | ||
lbg | Lodderomyces beijingensis | 6,161 | 3,947 | 24 | ||
cal | Candida albicans | Ref | 6,043 | 3,719 | 119 | 67 |
ctp | Candida tropicalis | 6,254 | 3,691 | |||
cot | Candida orthopsilosis | 5,677 | 3,614 | 86 | 82 | |
cdu | Candida dubliniensis | 5,860 | 3,678 | 112 | 112 | |
cten | Yamadazyma tenuis | 5,226 | 2,884 | 111 | ||
clu | Clavispora lusitaniae ATCC 42720 | 5,936 | 3,461 | |||
clus | Clavispora lusitaniae CBS 6936 | 5,555 | 3,529 | 228 | 191 | |
caur | Candidozyma auris | 5,327 | 3,274 | 167 | ||
asau | Australozyma saopauloensis | 4,994 | 3,217 | 193 | ||
ppa | Komagataella phaffii | 5,040 | 3,391 | |||
pkz | Pichia kudriavzevii | 5,139 | 3,381 | 185 | 147 | |
bnn | Brettanomyces nanus | 4,711 | 3,260 | 112 | 59 | |
bbrx | Brettanomyces bruxellensis | 5,243 | 3,493 | 99 | 59 | |
opa | Ogataea parapolymorpha | 5,325 | 3,528 | 3 | 2 | |
Dipodascomycetes | ||||||
yli | Yarrowia lipolytica | 6,485 | 3,609 | 815 | ||
slb | Sugiyamaella lignohabitans | 5,135 | 3,111 | 253 | 75 | |
Sordariomycetes | ||||||
ncr | Neurospora crassa | Ref | 9,758 | 3,708 | 416 | 229 |
nte | Neurospora tetrasperma | 10,380 | 3,591 | |||
smp | Sordaria macrospora | 10,309 | 3,659 | 475 | ||
pan | Podospora anserina | 10,600 | 3,902 | 29 | 29 | |
pbel | Podospora bellae-mahoneyi | 11,028 | 3,839 | |||
ppsd | Podospora pseudocomata | 11,301 | 3,874 | |||
ppsp | Podospora pseudopauciseta | 11,145 | 3,858 | |||
ppsa | Podospora pseudoanserina | 11,121 | 3,823 | |||
ttt | Thermothielavioides terrestris | 9,802 | 3,727 | 156 | 155 | |
mtm | Thermothelomyces thermophilus | 9,097 | 3,686 | 194 | 193 | |
cthr | Thermochaetoides thermophila | 7,180 | 3,412 | 28 | 27 | |
rthe | Remersonia thermophila | 7,595 | 3,586 | 168 | ||
mgr | Pyricularia oryzae | Ref | 12,825 | 4,060 | 40 | 40 |
ppei | Pyricularia pennisetigena | 11,428 | 3,827 | |||
pgri | Pyricularia grisea | 12,441 | 3,939 | |||
tmn | Phaeoacremonium minimum | 8,834 | 3,780 | |||
ssck | Sporothrix schenckii | 10,293 | 3,846 | 2 | 2 | |
fgr | Fusarium graminearum | Ref | 13,329 | 4,375 | 118 | 114 |
fpu | Fusarium pseudograminearum | 12,397 | 4,350 | |||
fpoa | Fusarium poae | 13,851 | 4,245 | |||
fvn | Fusarium venenatum | 13,931 | 4,326 | 585 | ||
fvr | Fusarium verticillioides | 15,869 | 4,774 | 75 | 2 | |
fox | Fusarium oxysporum | 20,925 | 5,156 | 121 | 3 | |
nhe | Fusarium vanettenii | 15,708 | 4,923 | |||
ffc | Fusarium falciforme | 14,574 | 4,777 | |||
fkr | Fusarium keratoplasticum | 14,423 | 4,717 | |||
fmu | Fusarium musae | 13,672 | 4,496 | |||
tre | Trichoderma reesei QM6a | 9,113 | 3,887 | |||
trr | Trichoderma reesei RUT C-30 | 9,849 | 3,887 | 199 | 19 | |
tatv | Trichoderma atroviride | 13,127 | 3,991 | 185 | ||
tasp | Trichoderma asperellum | 11,857 | 4,052 | 184 | ||
maw | Metarhizium acridum | 12,160 | 3,892 | |||
maj | Metarhizium robertsii | 11,688 | 4,231 | |||
mbrn | Metarhizium brunneum | 11,405 | 4,133 | 150 | ||
pchm | Pochonia chlamydosporia | 14,204 | 4,205 | |||
cmt | Cordyceps militaris | 9,651 | 3,843 | |||
amus | Akanthomyces muscarius | 12,347 | 4,041 | |||
plj | Purpureocillium lilacinum | 10,532 | 4,118 | 25 | ||
ptkz | Purpureocillium takamizusanense | 10,768 | 4,043 | 152 | 1 | |
val | Verticillium alfalfae | 10,237 | 3,798 | |||
vda | Verticillium dahliae | 10,535 | 4,039 | 46 | 46 | |
cfj | Colletotrichum fioriniae | 13,759 | 4,561 | |||
clup | Colletotrichum lupini | 18,280 | 3,890 | 401 | 4 | |
chig | Colletotrichum higginsianum | 14,651 | 4,415 | |||
cdet | Colletotrichum destructivum | 15,627 | 4,550 | |||
sapo | Scedosporium apiospermum | 8,375 | 3,417 | |||
ela | Eutypa lata | 11,685 | 4,038 | |||
pfy | Pestalotiopsis fici | 15,413 | 4,839 | |||
Leotiomycetes | ||||||
ssl | Sclerotinia sclerotiorum | 14,490 | 3,921 | 33 | 6 | |
bfu | Botrytis cinerea (gray mold) | 11,698 | 4,202 | |||
mbe | Drepanopeziza brunnea | 10,027 | 3,855 | |||
psco | Mollisia scopiformis | 18,556 | 4,860 | |||
glz | Glarea lozoyensis | 13,083 | 4,196 | |||
Eurotiomycetes | ||||||
ani | Aspergillus nidulans | Ref | 10,475 | 3,806 | 30 | 29 |
afm | Aspergillus fumigatus | Ref | 9,630 | 4,112 | ||
act | Aspergillus clavatus | 9,121 | 4,016 | |||
nfi | Aspergillus fischeri | 10,388 | 4,250 | |||
aor | Aspergillus oryzae | Ref | 12,074 | 4,292 | 28 | 25 |
ang | Aspergillus niger (black aspergilli) | 14,074 | 4,194 | 92 | 29 | |
afv | Aspergillus flavus | 14,313 | 4,345 | |||
aluc | Aspergillus luchuensis | 12,662 | 4,239 | 279 | 48 | |
ache | Aspergillus chevalieri | 10,331 | 3,853 | 187 | 24 | |
apuu | Aspergillus puulaauensis | 13,606 | 4,569 | 143 | 2 | |
pcs | Penicillium rubens | 11,625 | 4,144 | |||
pdp | Penicillium digitatum | 8,946 | 3,734 | |||
pou | Penicillium oxalicum | 9,718 | 3,756 | 45 | 1 | |
tmf | Talaromyces marneffei | 9,994 | 3,907 | 72 | ||
trg | Talaromyces rugulosus | 11,901 | 4,192 | 70 | 3 | |
cim | Coccidioides immitis | 9,757 | 3,673 | 27 | 27 | |
cpw | Coccidioides posadasii | 8,299 | 3,604 | 137 | ||
ure | Uncinocarpus reesii | 7,760 | 3,383 | |||
abe | Trichophyton benhamiae | 7,980 | 3,465 | |||
tve | Trichophyton verrucosum | 8,028 | 3,455 | |||
pbl | Paracoccidioides lutzii Pb01 | 8,826 | 3,519 | 22 | 21 | |
pbn | Paracoccidioides brasiliensis | 8,390 | 3,494 | 29 | 4 | |
aje | Histoplasma mississippiense | 9,313 | 3,331 | |||
bgh | Blastomyces gilchristii | 9,692 | 3,606 | 21 | 4 | |
Dothideomycetes | ||||||
pno | Parastagonospora nodorum | 15,990 | 4,227 | 29 | 28 | |
pte | Pyrenophora teres | 11,799 | 4,128 | |||
ptrr | Pyrenophora tritici-repentis | 15,455 | 3,948 | |||
bze | Bipolaris zeicola | 12,853 | 4,204 | |||
bsc | Bipolaris sorokiniana | 12,214 | 4,200 | |||
bor | Bipolaris oryzae | 12,002 | 4,177 | |||
aalt | Alternaria alternata | 13,466 | 4,365 | |||
adac | Alternaria dauci | 10,026 | 4,036 | |||
arab | Ascochyta rabiei | 11,525 | 4,046 | 112 | ||
ztr | Zymoseptoria tritici | 10,963 | 3,982 | |||
pfj | Pseudocercospora fijiensis | 13,065 | 4,093 | |||
ffu | Fulvia fulva | 14,993 | 4,132 | |||
cbet | Cercospora beticola | 12,271 | 4,080 | |||
bcom | Baudoinia panamericana | 10,508 | 3,781 | |||
npa | Neofusicoccum parvum | 10,366 | 3,951 | |||
Pezizomycetes | ||||||
tml | Tuber melanosporum | 7,496 | 3,413 | |||
Schizosaccharomycetes | ||||||
spo | Schizosaccharomyces pombe (fission yeast) | Ref | 5,124 | 3,210 | 356 | |
som | Schizosaccharomyces osmophilus (fission yeast) | 5,111 | 3,158 | 502 | 6 | |
Basidiomycetes | ||||||
Tremellomycetes | ||||||
cne | Cryptococcus neoformans var. neoformans JEC21 | Ref | 6,632 | 3,560 | 134 | 121 |
cnb | Cryptococcus neoformans var. neoformans B-3501A | 6,500 | 3,510 | |||
cng | Cryptococcus neoformans var. grubii H99 | 6,975 | 3,561 | 1,215 | 3 | |
cgi | Cryptococcus gattii | 6,565 | 3,434 | |||
cdeu | Cryptococcus deuterogattii | 6,408 | 3,469 | |||
cdep | Cryptococcus depauperatus | 6,341 | 3,238 | 114 | ||
kmg | Kwoniella mangroviensis | 8,516 | 3,611 | 43 | ||
kne | Kwoniella newhampshirensis | 7,145 | 3,524 | 19 | ||
tms | Tremella mesenterica | 8,308 | 3,195 | |||
tasa | Trichosporon asahii var. asahii | 8,300 | 3,245 | |||
ccac | Cutaneotrichosporon cavernicola | 7,753 | 3,560 | |||
Agaricomycetes | ||||||
ppl | Postia placenta | 9,083 | 1,710 | |||
tvs | Trametes versicolor | 14,292 | 4,039 | |||
dsq | Dichomitus squalens | 12,287 | 3,904 | |||
pco | Phanerochaete carnosa | 13,925 | 3,836 | |||
shs | Stereum hirsutum | 14,066 | 4,204 | |||
hir | Heterobasidion irregulare | 13,271 | 3,889 | |||
psq | Punctularia strigosozonata | 11,540 | 3,857 | |||
adl | Auricularia subglabra | 23,555 | 4,347 | 226 | 6 | |
fme | Fomitiporia mediterranea | 11,338 | 3,825 | |||
gtr | Gloeophyllum trabeum | 11,755 | 3,981 | |||
rsx | Rhizoctonia solani | 12,301 | 3,293 | 124 | ||
lbc | Laccaria bicolor | 18,215 | 3,758 | |||
cci | Coprinopsis cinerea (gray shag) | 13,339 | 3,955 | 8 | 1 | |
abp | Agaricus bisporus var. burnettii JB137-S8 | 11,271 | 3,722 | |||
abv | Agaricus bisporus var. bisporus H97 | 10,444 | 3,706 | |||
pcub | Psilocybe cubensis (magic mushroom) | 13,329 | 2,405 | |||
mpr | Moniliophthora perniciosa | 13,560 | 1,667 | 114 | 4 | |
mrr | Moniliophthora roreri | 17,910 | 4,435 | |||
more | Marasmius oreades (fairy-ring mushroom) | 13,699 | 3,989 | |||
scm | Schizophyllum commune | 16,187 | 3,734 | |||
cput | Coniophora puteana | 13,758 | 3,916 | |||
sla | Serpula lacrymans | 12,920 | 3,475 | |||
Wallemiomycetes | ||||||
wse | Wallemia mellicola | 5,277 | 3,027 | |||
wic | Wallemia ichthyophaga | 4,863 | 2,835 | 2 | 2 | |
Ustilaginomycetes | ||||||
uma | Mycosarcoma maydis | 6,764 | 3,379 | 34 | 34 | |
pfp | Pseudozyma flocculosa | 6,877 | 3,341 | |||
sgra | Sporisorium graminicola | 6,591 | 3,022 | |||
Malasseziomycetes | ||||||
mgl | Malassezia globosa | 4,283 | 2,712 | |||
mrt | Malassezia restricta | 4,406 | 2,899 | 138 | 5 | |
msym | Malassezia sympodialis | 3,318 | 2,373 | |||
Pucciniomycetes | ||||||
pgr | Puccinia graminis | 15,800 | 3,658 | |||
ptrc | Puccinia triticina (wheat leaf rust) | 12,736 | 3,275 | |||
pstr | Puccinia striiformis f. sp. tritici (wheat yellow rust fungus) | 17,132 | 3,692 | 24 | ||
mlr | Melampsora larici-populina | 16,372 | 3,530 | |||
Fungi incertae sedis | ||||||
Microsporidia | ||||||
ecu | Encephalitozoon cuniculi | 2,122 | 905 | 33 | 30 | |
ein | Encephalitozoon intestinalis | 1,939 | 955 | 72 | 55 | |
ehe | Encephalitozoon hellem | 1,847 | 955 | 65 | 58 | |
ero | Encephalitozoon romaleae | 1,831 | 938 | 5 | 5 | |
nce | Vairimorpha ceranae | 2,060 | 756 | 64 | 7 | |
vnx | Vairimorpha necatrix | 3,079 | 806 | 135 | ||
Mucoromycota | ||||||
rie | Rhizophagus irregularis | 30,147 | 3,954 | |||
Protists | ||||||
other Opisthokonta | ||||||
Choanoflagellates | ||||||
mbr | Monosiga brevicollis | 9,171 | 3,599 | |||
sre | Salpingoeca rosetta | 11,618 | 4,072 | 48 | 43 | |
Amoebozoa | ||||||
Dictyostelia | ||||||
ddi | Dictyostelium discoideum (cellular slime mold) | Ref | 13,289 | 3,470 | 20 | 20 |
dpp | Dictyostelium purpureum (cellular slime mold) | 12,399 | 3,515 | |||
dfa | Cavenderia fasciculata (cellular slime mold) | 12,213 | 3,420 | 19 | 19 | |
Entamoeba | ||||||
ehi | Entamoeba histolytica | 8,162 | 2,046 | |||
edi | Entamoeba dispar | 8,811 | 2,171 | |||
eiv | Entamoeba invadens | 11,997 | 2,339 | |||
Acanthamoeba | ||||||
acan | Acanthamoeba castellanii | 14,973 | 4,005 | |||
Alveolates | ||||||
Apicomplexans | ||||||
pfa | Plasmodium falciparum 3D7 | Ref | 5,315 | 1,792 | 213 | 78 |
pfd | Plasmodium falciparum Dd2 | 5,139 | 1,142 | 43 | ||
pfh | Plasmodium falciparum HB3 | 5,462 | 1,575 | 68 | ||
prei | Plasmodium reichenowi | 5,012 | 1,508 | 80 | 8 | |
pgab | Plasmodium gaboni | 5,167 | 1,538 | 75 | 9 | |
plag | Plasmodium sp. gorilla clade G2 | 5,320 | 1,626 | 107 | ||
pyo | Plasmodium yoelii | 6,004 | 1,645 | 107 | 46 | |
pcb | Plasmodium chabaudi | 5,196 | 1,663 | 90 | 38 | |
pbe | Plasmodium berghei | 4,908 | 1,664 | 62 | 9 | |
pvv | Plasmodium vinckei vinckei | 5,050 | 1,573 | 78 | 1 | |
pkn | Plasmodium knowlesi | 5,321 | 1,637 | 83 | 11 | |
pvx | Plasmodium vivax | 5,392 | 1,668 | 22 | ||
pcy | Plasmodium cynomolgi | 5,716 | 1,583 | |||
pmal | Plasmodium malariae | 5,926 | 1,522 | 63 | 4 | |
pbrs | Plasmodium brasilianum | 5,755 | 1,394 | |||
prel | Plasmodium relictum | 5,132 | 1,552 | 82 | 5 | |
pcot | Plasmodium coatneyi | 5,516 | 1,512 | 15 | ||
tan | Theileria annulata | 3,792 | 1,489 | |||
tpv | Theileria parva | 4,061 | 1,519 | 26 | 23 | |
tot | Theileria orientalis | 3,995 | 1,481 | 56 | 56 | |
beq | Theileria equi | 5,329 | 1,571 | |||
bbo | Babesia bovis | 3,959 | 1,532 | 29 | 1 | |
bmic | Babesia microti | 3,601 | 1,478 | 40 | 6 | |
bbig | Babesia bigemina | 5,069 | 1,555 | |||
bdw | Babesia duncani | 4,165 | 113 | |||
cpv | Cryptosporidium parvum | 3,805 | 1,551 | |||
cho | Cryptosporidium hominis | 3,885 | 1,371 | |||
tgo | Toxoplasma gondii | 8,168 | 2,083 | 150 | 150 | |
bbes | Besnoitia besnoiti | 8,193 | 1,814 | 12 | ||
Ciliates | ||||||
tet | Tetrahymena thermophila | 27,041 | 4,112 | 14 | 10 | |
ptm | Paramecium tetraurelia | 40,043 | 7,931 | 1 | 1 | |
Stramenopiles | ||||||
Diatoms | ||||||
pti | Phaeodactylum tricornutum | Ref | 10,392 | 2,589 | ||
fcy | Fragilariopsis cylindrus | 18,082 | 3,227 | 163 | 162 | |
tps | Thalassiosira pseudonana | Ref | 11,672 | 2,738 | ||
Eustigmatophytes | ||||||
ngd | Nannochloropsis gaditana | 3,554 | 863 | |||
Pelagophytes | ||||||
aaf | Aureococcus anophagefferens | 11,625 | 3,183 | 31 | 30 | |
Oomycetes | ||||||
pif | Phytophthora infestans | 17,797 | 4,796 | |||
psoj | Phytophthora sojae | 26,536 | 4,859 | 27 | 27 | |
blac | Bremia lactucae (lettuce downy mildew) | 9,808 | 1,103 | 28 | ||
spar | Saprolegnia parasitica | 20,088 | 4,991 | 23 | 14 | |
Euglenozoa | ||||||
Kinetoplasts | ||||||
tbr | Trypanosoma brucei brucei | Ref | 8,758 | 2,358 | 462 | 2 |
tbg | Trypanosoma brucei gambiense | 9,821 | 2,198 | 17 | 1 | |
tcr | Trypanosoma cruzi | 19,602 | 3,680 | |||
lma | Leishmania major | Ref | 8,316 | 2,290 | 1,275 | 108 |
lif | Leishmania infantum | 8,109 | 2,232 | 122 | 72 | |
ldo | Leishmania donovani | 8,032 | 2,058 | 112 | 71 | |
lmi | Leishmania mexicana | 8,147 | 2,214 | |||
lmat | Leishmania martiniquensis | 7,967 | 2,116 | |||
lbz | Leishmania braziliensis | 7,987 | 2,167 | 97 | 70 | |
lpan | Leishmania panamensis | 7,711 | 2,073 | |||
loi | Leishmania orientalis | 8,158 | 2,095 | |||
leis | Leishmania sp. Ghana 2012 LV757 | 8,119 | 2,014 | |||
lenr | Leishmania enriettii | 8,353 | 2,005 | |||
lein | Leishmania sp. Namibia | 8,266 | 2,131 | |||
phet | Porcisia hertigi | 7,891 | 2,148 | |||
Heterolobosea | ||||||
Tetramitia | ||||||
ngr | Naegleria gruberi | 15,709 | 3,697 | |||
Metamonada | ||||||
Trichomonads | ||||||
tva | Trichomonas vaginalis | 72,290 | 4,811 | 138 | ||
Diplomonads | ||||||
gla | Giardia lamblia | 4,965 | 942 | 40 | ||
ssao | Spironucleus salmonicida | 8,667 | 1,321 | 43 | ||
other Eukaryota | ||||||
Haptophyta | ||||||
ehx | Emiliania huxleyi | 38,544 | 5,911 | |||
Cryptomonads | ||||||
gtt | Guillardia theta | 24,798 | 4,530 | |||
Bacteria | ||||||
Enterobacteria | ||||||
Escherichia | ||||||
eco | Escherichia coli K-12 MG1655 | Ref | 4,288 | 3,230 | 206 | 154 |
ecj | Escherichia coli K-12 W3110 | Ref | 4,226 | 3,251 | 157 | 138 |
ecd | Escherichia coli K-12 DH10B | 4,126 | 3,181 | 157 | 145 | |
ebw | Escherichia coli K-12 BW2952 | 4,084 | 3,180 | 171 | 152 | |
ecok | Escherichia coli K-12 MDS42 | 3,547 | 2,843 | 150 | 139 | |
ecoc | Escherichia coli K-12 C3026 | 4,729 | 3,402 | 130 | 61 | |
ece | Escherichia coli O157:H7 EDL933 (EHEC) | Ref | 5,449 | 3,559 | 129 | 127 |
ecs | Escherichia coli O157:H7 Sakai (EHEC) | Ref | 5,155 | 3,473 | 126 | 119 |
ecf | Escherichia coli O157:H7 EC4115 (EHEC) | 5,477 | 3,445 | 188 | 166 | |
etw | Escherichia coli O157:H7 TW14359 (EHEC) | 5,373 | 3,507 | 128 | 128 | |
elx | Escherichia coli O157:H7 Xuzhou21 (EHEC) | 5,183 | 3,490 | 115 | 114 | |
eoi | Escherichia coli O111:H- 11128 (EHEC) | 5,407 | 3,604 | 203 | 173 | |
eoj | Escherichia coli O26:H11 11368 (EHEC) | 5,519 | 3,704 | 194 | 165 | |
eoh | Escherichia coli O103:H2 12009 (EHEC) | 5,121 | 3,545 | 191 | 163 | |
ecoo | Escherichia coli O145:H28 RM13514 (EHEC) | 5,776 | 3,591 | 129 | 128 | |
ecoh | Escherichia coli O145:H28 RM13516 (EHEC) | 5,513 | 3,534 | 123 | 122 | |
esl | Escherichia coli O104:H4 2011C-3493 (EAEC) | 5,150 | 3,523 | 116 | 115 | |
eso | Escherichia coli O104:H4 2009EL-2071 (EAEC) | 5,126 | 3,519 | 121 | 120 | |
esm | Escherichia coli O104:H4 2009EL-2050 (EAEC) | 5,183 | 3,528 | 121 | 120 | |
eck | Escherichia coli 55989 (EAEC) | 4,763 | 3,406 | 226 | 163 | |
ecg | Escherichia coli O127:H6 E2348/69 (EPEC) | 4,653 | 3,257 | 191 | 141 | |
eok | Escherichia coli O55:H7 CB9615 (EPEC) | 5,121 | 3,442 | 174 | 153 | |
elr | Escherichia coli O55:H7 RM12579 (EPEC) | 5,128 | 3,448 | 127 | 126 | |
elh | Escherichia coli O78:H11:K80 H10407 (ETEC) | 4,873 | 3,445 | 110 | 110 | |
ecw | Escherichia coli O139:H28 E24377A (ETEC) | 4,997 | 3,362 | 113 | 111 | |
eun | Escherichia coli UMNK88 (ETEC, porcine) | 5,608 | 3,510 | 118 | 118 | |
ecp | Escherichia coli O6:K15:H31 536 (UPEC) | 4,629 | 3,322 | 103 | 102 | |
ena | Escherichia coli NA114 (UPEC) | 4,873 | 3,306 | 102 | 102 | |
ecos | Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC) | 5,100 | 3,496 | 116 | 111 | |
ecv | Escherichia coli APEC O1 (APEC) | 4,890 | 3,323 | 93 | 93 | |
ecoa | Escherichia coli APEC O78 (APEC) | 4,589 | 3,310 | 107 | 105 | |
ecx | Escherichia coli O9 HS (commensal) | 4,384 | 3,175 | 158 | 140 | |
ecm | Escherichia coli SMS-3-5 (environmental) | 4,913 | 3,436 | 112 | 111 | |
ecy | Escherichia coli O152:H28 SE11 (commensal) | 5,002 | 3,409 | 107 | 107 | |
ecr | Escherichia coli O8 IAI1 (commensal) | 4,354 | 3,245 | 197 | 151 | |
ecq | Escherichia coli O81 ED1a (commensal) | 4,915 | 3,336 | 203 | 152 | |
eum | Escherichia coli O17:K52:H18 UMN026 (ExPEC) | 5,017 | 3,531 | 194 | 152 | |
ect | Escherichia coli O7:K1 IAI39 (ExPEC) | 4,732 | 3,449 | 207 | 148 | |
eoc | Escherichia coli O7:K1 CE10 | 5,080 | 3,517 | 113 | 113 | |
ebr | Escherichia coli B REL606 | 4,209 | 3,198 | 107 | 107 | |
ecob | Escherichia coli B C3029 | 4,317 | 3,176 | 120 | 107 | |
ebl | Escherichia coli BL21(DE3) | 4,196 | 3,192 | 173 | 124 | |
ebe | Escherichia coli BL21(DE3) | 4,206 | 3,230 | 107 | 107 | |
ebd | Escherichia coli BL21-Gold(DE3)pLysS AG | 4,228 | 3,196 | 112 | 110 | |
eci | Escherichia coli O18:K1:H7 UTI89 (UPEC) | 5,211 | 3,398 | 110 | 110 | |
eih | Escherichia coli O18:K1:H7 IHE3034 (ExPEC) | 4,757 | 3,303 | 118 | 117 | |
ecz | Escherichia coli O45:K1:H7 S88 (ExPEC) | 4,832 | 3,370 | 205 | 154 | |
ecc | Escherichia coli O6:K2:H1 CFT073 (UPEC) | 5,379 | 3,423 | 116 | 110 | |
elo | Escherichia coli O44:H18 042 (EAEC) | 4,918 | 3,436 | 115 | 114 | |
eln | Escherichia coli O83:H1 NRG 857C (AIEC) | 4,582 | 3,343 | 106 | 105 | |
ese | Escherichia coli O150:H5 SE15 (commensal) | 4,488 | 3,344 | 106 | 106 | |
ecl | Escherichia coli ATCC 8739 | 4,200 | 3,246 | 128 | 119 | |
ekf | Escherichia coli KO11FL | 4,709 | 3,394 | 107 | 107 | |
eab | Escherichia coli ABU 83972 | 4,796 | 3,387 | 110 | 110 | |
edh | Escherichia coli DH1 | 4,160 | 3,206 | 114 | 112 | |
edj | Escherichia coli DH1 | 4,260 | 3,228 | 150 | 138 | |
elu | Escherichia coli UM146 | 4,783 | 3,375 | 108 | 106 | |
elw | Escherichia coli W | 4,606 | 3,319 | 180 | 150 | |
ell | Escherichia coli W | 4,731 | 3,370 | 109 | 109 | |
elc | Escherichia coli clone D i14 | 4,919 | 3,319 | 110 | 110 | |
eld | Escherichia coli clone D i2 | 4,919 | 3,319 | 110 | 110 | |
elp | Escherichia coli P12b | 4,393 | 3,187 | 105 | 105 | |
elf | Escherichia coli LF82 | 4,376 | 3,270 | 158 | 143 | |
ecol | Escherichia coli LY180 | 4,463 | 3,274 | 106 | 106 | |
ecoi | Escherichia coli O18:K1 PMV-1 (ExPEC) | 4,707 | 3,343 | 268 | 154 | |
ecoj | Escherichia coli JJ1886 | 5,049 | 3,503 | 110 | 110 | |
efe | Escherichia fergusonii | 4,324 | 3,104 | 177 | 145 | |
eal | Escherichia albertii | 4,422 | 3,098 | 107 | 107 | |
ema | Escherichia marmotae | 4,495 | 3,221 | 111 | 109 | |
esz | Escherichia sp. E4742 | 4,708 | 3,249 | 127 | 118 | |
eruy | Escherichia ruysiae | 4,035 | 3,030 | 116 | 102 | |
Salmonella | ||||||
sty | Salmonella enterica subsp. enterica serovar Typhi CT18 | Ref | 4,766 | 3,073 | 110 | |
stt | Salmonella enterica subsp. enterica serovar Typhi Ty2 | 4,322 | 3,024 | 109 | 108 | |
sex | Salmonella enterica subsp. enterica serovar Typhi P-stx-12 | 4,924 | 3,106 | 98 | 98 | |
sent | Salmonella enterica subsp. enterica serovar Typhi Ty21a | 4,509 | 3,082 | 100 | 100 | |
stm | Salmonella enterica subsp. enterica serovar Typhimurium LT2 | Ref | 4,554 | 3,240 | 118 | 114 |
seo | Salmonella enterica subsp. enterica serovar Typhimurium 14028S | Ref | 5,413 | 3,237 | 117 | 112 |
sev | Salmonella enterica subsp. enterica serovar Typhimurium D23580 | 4,446 | 3,178 | 109 | 108 | |
sey | Salmonella enterica subsp. enterica serovar Typhimurium SL1344 | 4,672 | 3,270 | 222 | 130 | |
sem | Salmonella enterica subsp. enterica serovar Typhimurium T000240 | 4,871 | 3,314 | 106 | 105 | |
sej | Salmonella enterica subsp. enterica serovar Typhimurium UK-1 | 4,555 | 3,236 | 107 | 101 | |
seb | Salmonella enterica subsp. enterica serovar Typhimurium ST4/74 | 4,842 | 3,273 | 106 | 106 | |
sef | Salmonella enterica subsp. enterica serovar Typhimurium 798 | 4,430 | 3,203 | 104 | 104 | |
setu | Salmonella enterica subsp. enterica serovar Typhimurium U288 | 4,798 | 3,271 | 107 | 106 | |
setc | Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921 | 4,801 | 3,314 | 106 | 106 | |
senr | Salmonella enterica subsp. enterica serovar Typhimurium DT2 | 4,496 | 3,199 | 88 | 84 | |
send | Salmonella enterica subsp. enterica serovar Typhimurium DT104 | 4,597 | 3,214 | 109 | 107 | |
seni | Salmonella enterica subsp. enterica serovar Typhimurium 138736 | 4,548 | 3,202 | 113 | 109 | |
seen | Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 08-1736 | 4,489 | 3,177 | 110 | 110 | |
spt | Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150 | 4,093 | 2,987 | 140 | 125 | |
sek | Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601 | 4,079 | 2,979 | 99 | 99 | |
spq | Salmonella enterica subsp. enterica serovar Paratyphi B | 5,601 | 3,154 | 152 | 134 | |
sei | Salmonella enterica subsp. enterica serovar Paratyphi C | 4,640 | 3,094 | 104 | 104 | |
sec | Salmonella enterica subsp. enterica serovar Choleraesuis | 4,666 | 3,124 | 107 | 107 | |
seh | Salmonella enterica subsp. enterica serovar Heidelberg SL476 | 4,779 | 3,167 | 155 | 134 | |
shb | Salmonella enterica subsp. enterica serovar Heidelberg B182 | 4,332 | 3,146 | 236 | 141 | |
senh | Salmonella enterica subsp. enterica serovar Heidelberg CFSAN002069 | 4,609 | 3,221 | 109 | 107 | |
seeh | Salmonella enterica subsp. enterica serovar Heidelberg 41578 | 4,712 | 3,237 | 107 | 106 | |
see | Salmonella enterica subsp. enterica serovar Newport SL254 | 4,805 | 3,174 | 155 | 137 | |
senn | Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1 | 4,828 | 3,178 | 109 | 109 | |
sew | Salmonella enterica subsp. enterica serovar Schwarzengrund | 4,627 | 3,108 | 148 | 132 | |
sea | Salmonella enterica subsp. enterica serovar Agona SL483 | 4,614 | 3,104 | 162 | 137 | |
sens | Salmonella enterica subsp. enterica serovar Agona 24249 | 4,342 | 3,116 | 110 | 106 | |
sed | Salmonella enterica subsp. enterica serovar Dublin | 4,617 | 3,081 | 152 | 133 | |
seg | Salmonella enterica subsp. enterica serovar Gallinarum 287/91 | 3,956 | 2,982 | 75 | 74 | |
sel | Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078 | 4,325 | 2,959 | 94 | 94 | |
sega | Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67 | 4,331 | 2,977 | 98 | 98 | |
set | Salmonella enterica subsp. enterica serovar Enteritidis P125109 | 4,200 | 3,120 | 106 | 105 | |
sena | Salmonella enterica subsp. enterica serovar Enteritidis EC20090135 | 4,320 | 3,141 | 122 | 109 | |
seno | Salmonella enterica subsp. enterica serovar Enteritidis EC20090193 | 4,325 | 3,146 | 122 | 109 | |
senv | Salmonella enterica subsp. enterica serovar Enteritidis EC20090332 | 4,325 | 3,146 | 122 | 109 | |
senq | Salmonella enterica subsp. enterica serovar Enteritidis EC20090531 | 4,323 | 3,144 | 122 | 109 | |
senl | Salmonella enterica subsp. enterica serovar Enteritidis OLF-SE1-1019-1 | 4,367 | 3,150 | 112 | 109 | |
senj | Salmonella enterica subsp. enterica serovar Javiana | 4,407 | 3,109 | 105 | 105 | |
seec | Salmonella enterica subsp. enterica serovar Cubana | 4,979 | 3,278 | 107 | 107 | |
seeb | Salmonella enterica subsp. enterica serovar Bareilly | 4,441 | 3,162 | 107 | 107 | |
seep | Salmonella enterica subsp. enterica serovar Pullorum | 4,052 | 2,829 | 100 | 100 | |
senb | Salmonella enterica subsp. enterica serovar Bovismorbificans | 4,733 | 3,153 | 81 | 73 | |
sene | Salmonella enterica subsp. enterica serovar Thompson | 4,357 | 3,140 | 101 | 101 | |
senc | Salmonella enterica subsp. enterica serovar Tennessee | 4,405 | 3,161 | 113 | 111 | |
ses | Salmonella enterica subsp. arizonae | 4,510 | 3,024 | 142 | 129 | |
sbg | Salmonella bongori NCTC 12419 | 3,864 | 2,902 | 107 | 106 | |
sbz | Salmonella bongori N268-08 | 4,770 | 3,013 | 107 | 106 | |
sbv | Salmonella bongori serovar 48:z41:-- | 3,940 | 2,865 | 104 | 103 | |
salz | Salmonella sp. SSDFZ69 | 4,621 | 3,224 | 117 | 108 | |
Shigella | ||||||
sfl | Shigella flexneri 301 (serotype 2a) | Ref | 4,313 | 3,201 | 129 | 127 |
sfx | Shigella flexneri 2457T (serotype 2a) | 4,068 | 3,085 | 131 | 129 | |
sfv | Shigella flexneri 8401 (serotype 5b) | 4,116 | 3,137 | 119 | 119 | |
sfe | Shigella flexneri 2002017 (serotype Fxv) | 4,706 | 3,238 | 123 | 122 | |
sfn | Shigella flexneri 2003036 | 4,891 | 3,288 | 117 | 117 | |
sfs | Shigella flexneri Shi06HN006 (serotype Yv) | 4,941 | 3,335 | 117 | 117 | |
sft | Shigella flexneri NCTC1 (serotype 2a) | 4,564 | 3,294 | 98 | 97 | |
ssn | Shigella sonnei Ss046 | 4,475 | 3,426 | 119 | 119 | |
sbo | Shigella boydii Sb227 (serotype 4) | 4,284 | 3,236 | 113 | 113 | |
sbc | Shigella boydii CDC 3083-94 (serotype 18) | 4,557 | 3,216 | 174 | 158 | |
sdy | Shigella dysenteriae Sd197 | 4,505 | 3,160 | 107 | 107 | |
sdz | Shigella dysenteriae 1617 (serotype 1) | 6,409 | 3,236 | 94 | 94 | |
shq | Shigella sp. PAMC 28760 | 4,287 | 3,196 | 119 | 111 | |
shig | Shigella sp. PIB | 4,616 | 3,317 | 122 | ||
Enterobacter | ||||||
enc | Enterobacter cloacae subsp. cloacae ATCC 13047 | Ref | 5,518 | 3,498 | 109 | 109 |
enl | Enterobacter cloacae subsp. dissolvens SDM | 4,542 | 3,217 | 104 | 104 | |
eclg | Enterobacter cloacae GGT036 | 4,467 | 3,178 | 109 | 109 | |
ecle | Enterobacter cloacae ECNIH2 | 5,091 | 3,382 | 113 | 113 | |
ecln | Enterobacter cloacae ECNIH4 | 4,514 | 3,204 | 110 | 110 | |
ecli | Enterobacter cloacae ECNIH5 | 4,495 | 3,212 | 109 | 109 | |
eclx | Enterobacter hormaechei subsp. xiangfangensis 34399 | 4,670 | 3,142 | 112 | 111 | |
ecly | Enterobacter hormaechei subsp. steigerwaltii | 4,806 | 3,316 | 110 | 109 | |
eclz | Enterobacter hormaechei subsp. hormaechei | 4,633 | 3,174 | 113 | 110 | |
eclo | Enterobacter hormaechei NCTC 9394 | 3,725 | 2,614 | 72 | 70 | |
ehm | Enterobacter hormaechei CAV1176 | 4,649 | 3,227 | 113 | 113 | |
exf | Enterobacter hormaechei subsp. xiangfangensis | 4,278 | 3,056 | 114 | 113 | |
ecla | Enterobacter hormaechei subsp. hoffmannii ECNIH3 | 4,559 | 3,199 | 109 | 109 | |
eclc | Enterobacter hormaechei subsp. hoffmannii ECR091 | 4,451 | 3,170 | 109 | 109 | |
eau | Enterobacter asburiae L1 | 4,143 | 3,059 | 110 | 110 | |
ekb | Enterobacter kobei DSM 13645 | 4,521 | 3,140 | 119 | 116 | |
eno | Enterobacter kobei ENHKU01 | 4,338 | 3,111 | 107 | 107 | |
eec | Enterobacter ludwigii EcWSU1 | 4,619 | 3,139 | 108 | 108 | |
elg | Enterobacter ludwigii EN-119 | 4,459 | 3,214 | 123 | 118 | |
ecan | Enterobacter cancerogenus | 4,372 | 3,167 | 116 | 114 | |
ern | Enterobacter roggenkampii DSM 16690 | 4,418 | 3,138 | 114 | 112 | |
ecls | Enterobacter roggenkampii 35734 | 4,755 | 3,244 | 109 | 109 | |
echg | Enterobacter chengduensis | 4,784 | 3,227 | 115 | 111 | |
esh | Enterobacter sichuanensis | 4,371 | 3,138 | 115 | 112 | |
ept | Enterobacter pasteurii | 4,530 | 3,212 | 116 | 111 | |
ent | Enterobacter sp. 638 | 4,240 | 2,994 | 108 | 108 | |
eas | Enterobacter soli | 4,612 | 3,253 | 109 | 108 | |
enr | Enterobacter sp. R4-368 | 4,827 | 3,225 | 114 | 114 | |
enx | Enterobacter sp. E20 | 4,289 | 3,050 | 109 | 109 | |
enf | Enterobacter sp. FY-07 | 4,940 | 3,210 | 104 | 104 | |
lni | Enterobacter sp. SGAir0187 | 4,415 | 3,156 | 116 | 112 | |
ebg | Enterobacter bugandensis | 4,402 | 3,150 | 117 | 112 | |
end | Enterobacter sp. ODB01 | 4,117 | 2,923 | 121 | 116 | |
enz | Enterobacter sp. T2 | 4,427 | 3,156 | 118 | 112 | |
ens | Enterobacter sp. DSM 30060 | 4,409 | 3,077 | 121 | 114 | |
enk | Enterobacter sp. AN-K1 | 4,312 | 3,112 | 115 | 114 | |
ehu | Enterobacter huaxiensis | 4,643 | 3,315 | 114 | 112 | |
emor | Enterobacter mori | 4,429 | 3,201 | 117 | 113 | |
enb | Enterobacter sp. N18-03635 | 4,335 | 3,044 | 119 | 116 | |
equ | Enterobacter quasiroggenkampii | 4,298 | 3,096 | 114 | 112 | |
epu | Enterobacter pseudoroggenkampii | 4,466 | 3,166 | 118 | 112 | |
enh | Enterobacter sp. EA-1 | 1,052 | 278 | 111 | 105 | |
edy | Enterobacter dykesii | 4,184 | 3,025 | 113 | 112 | |
eax | Enterobacter adelaidei | 4,786 | 3,190 | 119 | 4 | |
Cronobacter | ||||||
esa | Cronobacter sakazakii ATCC BAA-894 | 4,442 | 2,805 | 123 | 116 | |
csk | Cronobacter sakazakii ES15 | 3,916 | 2,744 | 102 | 101 | |
csz | Cronobacter sakazakii Sp291 | 4,183 | 2,818 | 104 | 104 | |
csj | Cronobacter sakazakii ATCC 29544 | 4,488 | 2,884 | 105 | 105 | |
ccon | Cronobacter condimenti | 3,958 | 2,797 | 105 | 105 | |
cdm | Cronobacter dublinensis | 4,113 | 2,826 | 105 | 105 | |
csi | Cronobacter malonaticus CMCC45402 | 4,313 | 2,805 | 104 | 103 | |
cmj | Cronobacter malonaticus LMG 23826 | 4,000 | 2,775 | 122 | 109 | |
cui | Cronobacter universalis | 3,952 | 2,791 | 105 | 105 | |
cmw | Cronobacter muytjensii | 3,842 | 2,767 | 106 | 106 | |
ctu | Cronobacter turicensis | 4,455 | 2,883 | 110 | 110 | |
Klebsiella | ||||||
kpn | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52) | Ref | 5,185 | 3,590 | 111 | 111 |
kpu | Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1) | 5,284 | 3,609 | 124 | 119 | |
kpm | Klebsiella pneumoniae subsp. pneumoniae HS11286 | 5,779 | 3,564 | 88 | 88 | |
kpp | Klebsiella pneumoniae subsp. pneumoniae 1084 (serotype K1) | 4,962 | 3,488 | 105 | 105 | |
kph | Klebsiella pneumoniae subsp. pneumoniae KPNIH24 | 5,344 | 3,625 | 117 | 113 | |
kpz | Klebsiella pneumoniae subsp. pneumoniae KPNIH27 | 5,699 | 3,748 | 119 | 112 | |
kpv | Klebsiella pneumoniae subsp. pneumoniae KPNIH29 | 5,271 | 3,529 | 117 | 113 | |
kpw | Klebsiella pneumoniae subsp. pneumoniae KPNIH30 | 5,416 | 3,527 | 117 | 113 | |
kpy | Klebsiella pneumoniae subsp. pneumoniae KPNIH31 | 5,246 | 3,502 | 115 | 111 | |
kpg | Klebsiella pneumoniae subsp. pneumoniae KPNIH32 | 5,741 | 3,694 | 118 | 114 | |
kpc | Klebsiella pneumoniae subsp. pneumoniae KPNIH10 | 5,397 | 3,632 | 119 | 114 | |
kpq | Klebsiella pneumoniae subsp. pneumoniae KPR0928 | 5,055 | 3,503 | 115 | 111 | |
kpt | Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1 | 5,081 | 3,511 | 110 | 110 | |
kpo | Klebsiella pneumoniae KCTC 2242 | 5,152 | 3,565 | 112 | 112 | |
kpr | Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 | 5,265 | 3,464 | 90 | 90 | |
kpj | Klebsiella pneumoniae JM45 | 5,141 | 3,412 | 108 | 108 | |
kpi | Klebsiella pneumoniae CG43 | 4,791 | 3,436 | 106 | 106 | |
kpa | Klebsiella pneumoniae 30660/NJST258_1 | 5,799 | 3,520 | 102 | 102 | |
kps | Klebsiella pneumoniae 30684/NJST258_2 | 5,591 | 3,494 | 111 | 111 | |
kpx | Klebsiella pneumoniae PMK1 | 5,594 | 3,731 | 113 | 113 | |
kpb | Klebsiella pneumoniae blaNDM-1 | 5,075 | 3,571 | 119 | 112 | |
kpne | Klebsiella pneumoniae 32192 | 5,495 | 3,573 | 122 | 118 | |
kpnu | Klebsiella pneumoniae 34618 | 5,550 | 3,619 | 117 | 113 | |
kpnk | Klebsiella pneumoniae Kp52.145 | 5,307 | 3,651 | 109 | 109 | |
kva | Klebsiella variicola At-22 | 5,057 | 3,599 | 114 | 113 | |
kpe | Klebsiella variicola 342 | 5,768 | 3,683 | 113 | 113 | |
kpk | Klebsiella variicola KP5-1 | 4,918 | 3,463 | 88 | 84 | |
kvd | Klebsiella variicola DX120E | 5,208 | 3,612 | 124 | 116 | |
kvq | Klebsiella variicola DSM 15968 | 4,992 | 3,559 | 127 | 115 | |
kqu | Klebsiella quasipneumoniae | 5,205 | 3,576 | 123 | 115 | |
kqv | Klebsiella quasivariicola | 5,703 | 3,708 | 124 | 116 | |
kox | Klebsiella michiganensis KCTC 1686 | 5,488 | 3,826 | 110 | 109 | |
koe | Klebsiella michiganensis E718 | 6,023 | 3,944 | 109 | 109 | |
koy | Klebsiella michiganensis HKOPL1 | 5,389 | 3,770 | 112 | 111 | |
kom | Klebsiella michiganensis M1 | 5,634 | 3,941 | 114 | 108 | |
kmi | Klebsiella michiganensis RC10 | 4,536 | 3,171 | 108 | 108 | |
kok | Klebsiella oxytoca KONIH1 | 6,155 | 4,051 | 117 | 113 | |
koc | Klebsiella oxytoca CAV1374 | 6,622 | 4,212 | 118 | 112 | |
eae | Klebsiella aerogenes KCTC 2190 | 4,912 | 3,336 | 109 | 109 | |
ear | Klebsiella aerogenes EA1509E | 5,499 | 3,436 | 114 | 113 | |
kll | Klebsiella sp. LTGPAF-6F | 6,136 | 4,088 | 124 | 113 | |
klw | Klebsiella huaxiensis | 5,716 | 3,977 | 121 | 114 | |
kar | Klebsiella africana | 5,027 | 3,476 | 122 | 115 | |
kgr | Klebsiella grimontii | 5,770 | 3,905 | 116 | 113 | |
kpas | Klebsiella pasteurii | 5,748 | 3,880 | 121 | 113 | |
klc | Klebsiella sp. CTHL.F3a | 5,536 | 3,851 | 124 | 114 | |
klm | Klebsiella sp. M5al | 5,310 | 3,692 | 117 | 113 | |
ree | Klebsiella electrica | 5,389 | 3,591 | 199 | 128 | |
klp | Klebsiella sp. MPUS7 | 5,277 | 3,740 | 116 | 113 | |
Raoultella | ||||||
ror | Raoultella ornithinolytica B6 | 4,909 | 3,503 | 104 | 104 | |
ron | Raoultella ornithinolytica S12 | 4,875 | 3,469 | 114 | 111 | |
rpln | Raoultella planticola | 4,758 | 3,221 | 123 | 112 | |
rao | Raoultella sp. X13 | 4,963 | 3,525 | 121 | 114 | |
rtg | Raoultella terrigena | 7,024 | 3,525 | 111 | 111 | |
Citrobacter | ||||||
cro | Citrobacter rodentium | Ref | 4,913 | 3,325 | 109 | 106 |
cko | Citrobacter koseri | 5,031 | 3,232 | 138 | 126 | |
cfd | Citrobacter freundii CFNIH1 | 4,961 | 3,492 | 111 | 109 | |
cbra | Citrobacter braakii | 4,818 | 3,464 | 120 | 115 | |
cwe | Citrobacter werkmanii | 4,530 | 3,222 | 118 | 114 | |
cyo | Citrobacter youngae | 4,556 | 3,327 | 121 | 113 | |
cpot | Citrobacter portucalensis | 4,508 | 3,313 | 116 | 113 | |
cfq | Citrobacter freundii complex sp. CFNIH3 | 5,179 | 3,546 | 118 | 113 | |
csed | Citrobacter sedlakii | 4,524 | 3,264 | 116 | 111 | |
cama | Citrobacter amalonaticus Y19 | 5,325 | 3,575 | 107 | 106 | |
caf | Citrobacter amalonaticus FDAARGOS_165 | 4,755 | 3,352 | 119 | 113 | |
cif | Citrobacter sp. FDAARGOS_156 | 4,401 | 3,226 | 118 | 112 | |
cfar | Citrobacter farmeri | 5,425 | 3,633 | 117 | 109 | |
cir | Citrobacter sp. CFNIH10 | 5,520 | 3,584 | 121 | 111 | |
cie | Citrobacter sp. CRE-46 | 5,837 | 3,726 | 125 | 112 | |
cpar | Citrobacter pasteurii | 4,308 | 3,173 | 119 | 112 | |
ctel | Citrobacter telavivensis | 5,458 | 3,642 | 119 | 110 | |
citz | Citrobacter tructae | 4,518 | 3,278 | 115 | 112 | |
cars | Citrobacter arsenatis | 5,008 | 3,483 | 116 | 112 | |
cix | Citrobacter sp. XT1-2-2 | 4,600 | 3,385 | 120 | 113 | |
cib | Citrobacter sp. TSA-1 | 4,745 | 3,424 | 116 | 112 | |
cens | Citrobacter enshiensis | 4,172 | 2,895 | 117 | 110 | |
citr | Citrobacter sp. LUTT5 | 4,608 | 3,356 | 122 | 112 | |
ciq | Citrobacter sp. TBCP-5362 | 4,169 | 3,175 | 118 | 4 | |
ciy | Citrobacter sp. Y3 | 4,981 | 3,435 | 116 | ||
Blochmanniella | ||||||
bfl | Candidatus Blochmanniella floridana | 583 | 565 | 42 | 42 | |
bpn | Candidatus Blochmanniella pennsylvanica | 610 | 587 | 44 | 44 | |
bva | Candidatus Blochmanniella vafra | 587 | 566 | 42 | 42 | |
bchr | Candidatus Blochmanniella chromaiodes | 609 | 587 | 46 | 46 | |
bhb | Candidatus Blochmanniella camponoti | 610 | 578 | 46 | 46 | |
bvx | Candidatus Blochmannia vicinus (nom. nud.) | 609 | 564 | 45 | 44 | |
ben | Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus 757 | 584 | 563 | 43 | 43 | |
bed | Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 675 | 589 | 570 | 44 | 44 | |
bec | Blochmannia endosymbiont of Colobopsis nipponica | 605 | 577 | 46 | 46 | |
bem | Blochmannia endosymbiont of Camponotus modoc | 609 | 580 | 46 | 46 | |
bocr | Candidatus Blochmannia ocreatus (nom. nud.) | 589 | 529 | 45 | 45 | |
Westeberhardia | ||||||
wca | Candidatus Westeberhardia cardiocondylae | 372 | 351 | 40 | 5 | |
Hamiltonella | ||||||
hde | Candidatus Hamiltonella defensa (Acyrthosiphon pisum) | 2,155 | 1,152 | 89 | 52 | |
unclassified aphid symbionts | ||||||
sect | Secondary endosymbiont of Ctenarytaina eucalypti | 918 | 640 | 45 | 45 | |
sehc | Secondary endosymbiont of Heteropsylla cubana | 576 | 517 | 44 | 43 | |
unclassified mealybug symbionts | ||||||
senm | Secondary endosymbiont of Trabutina mannipara | 237 | 232 | 49 | 46 | |
Riesia | ||||||
rip | Candidatus Riesia pediculicola | 556 | 450 | 40 | 40 | |
rig | Candidatus Riesia sp. GBBU | 449 | 426 | 39 | 30 | |
rped | Candidatus Riesia pediculischaeffi | 448 | 402 | 39 | 5 | |
Moranella | ||||||
men | Candidatus Moranella endobia PCIT | 406 | 398 | 46 | 46 | |
meo | Candidatus Moranella endobia PCVAL | 411 | 401 | 47 | 47 | |
Shimwellia | ||||||
ebt | Shimwellia blattae | 3,904 | 2,813 | 113 | 113 | |
Cedecea | ||||||
cnt | Cedecea neteri SSMD04 | 4,318 | 3,130 | 104 | 104 | |
cem | Cedecea neteri M006 | 4,423 | 3,110 | 103 | 103 | |
cen | Cedecea neteri ND14a | 4,141 | 3,016 | 104 | 103 | |
clap | Cedecea lapagei | 4,516 | 3,037 | 105 | 104 | |
Pluralibacter | ||||||
pge | Pluralibacter gergoviae | 4,842 | 3,393 | 120 | 110 | |
esc | Enterobacter lignolyticus SCF1 | 4,399 | 3,260 | 108 | 107 | |
kle | Enterobacter lignolyticus G5 | 4,237 | 3,164 | 108 | 108 | |
Kosakonia | ||||||
ksa | Kosakonia sacchari | 4,473 | 3,149 | 116 | 108 | |
kor | Kosakonia oryzae | 4,964 | 3,419 | 117 | 108 | |
krd | Kosakonia radicincitans | 5,105 | 3,503 | 116 | 109 | |
kco | Kosakonia cowanii | 4,338 | 3,001 | 114 | 108 | |
kot | Kosakonia sp. CCTCC M2018092 | 4,325 | 3,016 | 112 | 107 | |
kpse | Kosakonia pseudosacchari | 4,610 | 3,180 | 115 | 108 | |
kob | Kosakonia sp. SMBL-WEM22 | 4,753 | 3,015 | 114 | 108 | |
koo | Kosakonia oryzendophytica | 4,762 | 3,177 | 110 | 108 | |
kou | Kosakonia sp. MUSA4 | 5,289 | 3,520 | 90 | 83 | |
kca | Kosakonia calanthes | 4,315 | 3,157 | 114 | 4 | |
Kluyvera | ||||||
kgo | Kluyvera genomosp. 3 | 2,237 | 1,350 | 117 | 115 | |
kie | Kluyvera intermedia | 4,877 | 3,048 | 117 | 116 | |
kas | Kluyvera ascorbata | 5,088 | 3,389 | 113 | 113 | |
klu | Kluyvera sp. CRP | 4,708 | 3,251 | 119 | 115 | |
kcy | Kluyvera cryocrescens | 4,375 | 3,130 | 124 | 116 | |
Ishikawella | ||||||
icp | Candidatus Ishikawaella capsulata | 623 | 582 | 48 | 48 | |
Leclercia | ||||||
lax | Leclercia adecarboxylata | 4,283 | 3,057 | 130 | 113 | |
lei | Leclercia sp. LSNIH1 | 5,069 | 3,277 | 123 | 114 | |
leh | Leclercia sp. LSNIH3 | 4,947 | 3,311 | 125 | 114 | |
lee | Leclercia sp. W17 | 4,748 | 3,168 | 120 | 115 | |
ler | Leclercia sp. Colony189 | 4,432 | 3,081 | 120 | 114 | |
lea | Leclercia sp. J807 | 4,318 | 3,110 | 122 | 114 | |
lpnu | Leclercia pneumoniae | 4,027 | 2,907 | 122 | 113 | |
ley | Leclercia sp. W6 | 4,574 | 3,078 | 118 | 114 | |
Lelliottia | ||||||
laz | Lelliottia amnigena | 4,207 | 3,058 | 116 | 106 | |
lef | Lelliottia jeotgali | 4,284 | 3,092 | 108 | 108 | |
lew | Lelliottia sp. WB101 | 4,290 | 3,005 | 117 | 113 | |
Buttiauxella | ||||||
buf | Buttiauxella sp. 3AFRM03 | 4,993 | 3,288 | 127 | 115 | |
bage | Buttiauxella agrestis | 4,110 | 3,064 | 109 | 109 | |
bft | Buttiauxella ferragutiae | 4,640 | 3,247 | 116 | 112 | |
bsel | Buttiauxella selenatireducens | 4,596 | 3,189 | 118 | 111 | |
Tachikawaea | ||||||
sbw | Candidatus Tachikawaea gelatinosa | 614 | 574 | 44 | 44 | |
Doolittlea | ||||||
den | Candidatus Doolittlea endobia | 568 | 464 | 55 | 47 | |
Hoaglandella | ||||||
hed | Candidatus Hoaglandella endobia | 517 | 484 | 54 | 48 | |
Gullanella | ||||||
ged | Candidatus Gullanella endobia | 461 | 442 | 49 | 45 | |
Mikella | ||||||
cmik | Candidatus Mikella endobia | 273 | 263 | 50 | 46 | |
Purcelliella | ||||||
ppet | Candidatus Purcelliella pentastirinorum | 427 | 400 | 35 | 28 | |
Symbiopectobacterium | ||||||
sym | Symbiopectobacterium purcellii | 4,182 | 2,732 | 107 | 87 | |
Annandia | ||||||
apin | Candidatus Annandia pinicola | 306 | 291 | 32 | 32 | |
aade | Candidatus Annandia adelgestsuga | 285 | 275 | 33 | 33 | |
Atlantibacter | ||||||
ahn | Atlantibacter hermannii | 4,824 | 2,913 | 108 | 106 | |
asub | Atlantibacter subterraneus | 4,376 | 3,074 | 115 | 109 | |
Yokenella | ||||||
yre | Yokenella regensburgei | 4,776 | 3,214 | 117 | 112 | |
Scandinavium | ||||||
sgoe | Scandinavium goeteborgense | 4,344 | 3,081 | 121 | 115 | |
Phytobacter | ||||||
kin | Phytobacter ursingii | 5,685 | 3,664 | 106 | 106 | |
pdz | Phytobacter diazotrophicus | 5,057 | 3,425 | 110 | 105 | |
mety | Phytobacter sp. MRY16-398 | 5,946 | 3,646 | 106 | 106 | |
Jejubacter | ||||||
izh | Jejubacter calystegiae | 4,679 | 3,204 | 112 | 109 | |
Profftia | ||||||
ptf | Candidatus Profftia tarda | 645 | 610 | 38 | 38 | |
plar | Candidatus Profftia lariciata | 559 | 536 | 39 | 39 | |
Schneideria | ||||||
sny | Candidatus Schneideria nysicola | 533 | 510 | 44 | 44 | |
Plesiomonas | ||||||
pshi | Plesiomonas shigelloides | 2,910 | 2,100 | 147 | 147 | |
Pseudocitrobacter | ||||||
psgc | Pseudocitrobacter corydidari | 4,564 | 3,239 | 116 | 115 | |
Siccibacter | ||||||
scol | Siccibacter colletis | 3,788 | 2,644 | 112 | 107 | |
Pseudescherichia | ||||||
pvj | Pseudescherichia vulneris | 4,312 | 2,858 | 114 | 107 | |
Superficieibacter | ||||||
supe | Superficieibacter sp. HKU1 | 4,446 | 3,081 | 110 | 109 | |
Trabulsiella | ||||||
toe | Trabulsiella odontotermitis | 4,281 | 3,080 | 115 | 108 | |
Apirhabdus | ||||||
aapt | Apirhabdus apintestini | 2,546 | 1,013 | 114 | 105 | |
Mangrovibacter | ||||||
mphg | Mangrovibacter phragmitis | 5,247 | 3,266 | 114 | 5 | |
Franconibacter | ||||||
fpul | Franconibacter pulveris | 4,483 | 2,999 | 118 | ||
unclassified Enterobacteriaceae | ||||||
ebf | Enterobacteriaceae bacterium FGI 57 | 4,323 | 3,187 | 148 | 135 | |
ebc | Enterobacteriaceae bacterium ENNIH2 | 5,934 | 3,599 | 119 | 109 | |
ebu | Enterobacteriaceae bacterium S05 | 4,783 | 3,352 | 120 | 115 | |
ebb | Enterobacteriaceae bacterium bta3-1 | 4,270 | 2,996 | 93 | 92 | |
psts | Plautia stali symbiont | 5,203 | 2,450 | 75 | 75 | |
eep | Enterobacteriaceae endosymbiont of Plateumaris pusilla | 448 | 433 | 40 | 40 | |
eem | Enterobacteriaceae endosymbiont of Macroplea mutica | 413 | 399 | 40 | 40 | |
Yersinia | ||||||
ype | Yersinia pestis CO92 (biovar Orientalis) | Ref | 4,083 | 2,779 | 95 | 85 |
ypk | Yersinia pestis KIM10+ (biovar Mediaevalis) | Ref | 4,205 | 2,732 | 100 | 99 |
yph | Yersinia pestis Harbin 35 (biovar Medievalis) | 4,436 | 2,703 | 113 | 109 | |
ypa | Yersinia pestis Antiqua (biovar Antiqua) | 4,364 | 2,920 | 103 | 98 | |
ypn | Yersinia pestis Nepal516 (biovar Antiqua) | 4,094 | 2,822 | 107 | 102 | |
ypm | Yersinia pestis 91001 (biovar Microtus) | 4,016 | 2,799 | 101 | 99 | |
ypp | Yersinia pestis Pestoides F (biovar Antiqua) | 4,069 | 2,837 | 105 | 102 | |
ypg | Yersinia pestis Angola | 4,045 | 2,695 | 118 | 111 | |
ypz | Yersinia pestis Z176003 | 3,693 | 2,694 | 87 | 87 | |
ypt | Yersinia pestis A1122 | 4,247 | 2,793 | 86 | 86 | |
ypd | Yersinia pestis D106004 | 3,781 | 2,745 | 89 | 89 | |
ypx | Yersinia pestis D182038 | 3,777 | 2,731 | 92 | 92 | |
ypw | Yersinia pestis PBM19 | 4,351 | 2,901 | 90 | 90 | |
ypj | Yersinia pestis Harbin35 | 4,286 | 2,867 | 92 | 92 | |
ypv | Yersinia pestis Shasta | 4,288 | 2,888 | 89 | 89 | |
ypl | Yersinia pestis El Dorado | 4,293 | 2,893 | 88 | 88 | |
yps | Yersinia pseudotuberculosis IP 32953 (serotype I) | Ref | 4,038 | 2,830 | 121 | 114 |
ypo | Yersinia pseudotuberculosis IP 32953 (serotype 1) | 4,181 | 2,850 | 107 | 107 | |
ypi | Yersinia pseudotuberculosis IP 31758 (serotype O:1b) | 4,324 | 2,822 | 133 | 127 | |
ypy | Yersinia pseudotuberculosis YPIII (serotype O:3) | 4,192 | 2,758 | 98 | 98 | |
ypb | Yersinia pseudotuberculosis PB1/+ (serotype 1B) | 4,237 | 2,820 | 97 | 97 | |
ypq | Yersinia pseudotuberculosis ATCC 6904 | 4,113 | 2,801 | 103 | 103 | |
ypu | Yersinia pseudotuberculosis MD67 | 4,054 | 2,774 | 106 | 106 | |
ypr | Yersinia pseudotuberculosis EP2/+ | 4,099 | 2,845 | 105 | 105 | |
ypc | Yersinia pseudotuberculosis 1 | 4,032 | 2,806 | 104 | 104 | |
ypf | Yersinia pseudotuberculosis PA3606 | 4,111 | 2,835 | 108 | 108 | |
yen | Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8) | Ref | 4,056 | 2,892 | 143 | 108 |
yep | Yersinia enterocolitica subsp. palearctica 105.5R(r) (serotype:O:9) | 4,021 | 2,899 | 93 | 93 | |
yey | Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3) | 4,459 | 2,944 | 92 | 92 | |
yew | Yersinia enterocolitica WA | 4,118 | 2,899 | 106 | 106 | |
yet | Yersinia enterocolitica 2516-87 | 4,067 | 2,938 | 100 | 100 | |
yef | Yersinia enterocolitica FORC_002 | 4,236 | 2,951 | 107 | 107 | |
yee | Yersinia enterocolitica (type O:5) YE53/03 | 4,282 | 2,931 | 183 | 103 | |
ysi | Yersinia similis | 4,135 | 2,734 | 110 | 109 | |
yal | Yersinia aldovae | 3,943 | 2,751 | 104 | 104 | |
yfr | Yersinia frederiksenii | 4,088 | 2,822 | 104 | 104 | |
yin | Yersinia intermedia | 4,300 | 2,972 | 103 | 103 | |
ykr | Yersinia rochesterensis | 3,988 | 2,808 | 103 | 103 | |
yro | Yersinia rohdei | 3,781 | 2,756 | 103 | 103 | |
yru | Yersinia ruckeri YRB | 3,133 | 2,354 | 101 | 101 | |
yrb | Yersinia ruckeri Big Creek 74 (serotype O2) | 3,136 | 2,363 | 104 | 104 | |
yak | Yersinia aleksiciae | 3,423 | 2,497 | 96 | 96 | |
yma | Yersinia massiliensis | 4,580 | 3,095 | 111 | 97 | |
yhi | Yersinia hibernica CFS1934 | 4,272 | 2,935 | 110 | 101 | |
yel | Yersinia hibernica LC20 | 4,351 | 2,850 | 112 | 107 | |
yca | Yersinia canariae | 4,132 | 2,922 | 109 | 99 | |
ymo | Yersinia mollaretii | 3,924 | 2,879 | 113 | 98 | |
yas | Yersinia alsatica | 4,271 | 2,995 | 118 | 73 | |
yki | Yersinia kristensenii | 4,249 | 2,848 | 116 | 49 | |
yeg | Yersinia entomophaga | 3,738 | 2,606 | 110 | 76 | |
Serratia | ||||||
smar | Serratia marcescens SM39 | Ref | 4,970 | 3,226 | 109 | 109 |
smac | Serratia marcescens subsp. marcescens Db11 | 4,709 | 3,148 | 110 | 109 | |
smw | Serratia marcescens WW4 | 4,809 | 3,190 | 101 | 101 | |
spe | Serratia proteamaculans | 4,942 | 3,336 | 109 | 108 | |
srr | Serratia plymuthica AS9 | 4,952 | 3,220 | 113 | 111 | |
srl | Serratia plymuthica 4Rx13 | 4,695 | 3,203 | 103 | 102 | |
sry | Serratia plymuthica S13 | 4,991 | 3,281 | 107 | 105 | |
sply | Serratia inhibens | 4,986 | 3,273 | 111 | 102 | |
srs | Serratia sp. AS12 | 4,952 | 3,220 | 113 | 111 | |
sra | Serratia sp. AS13 | 4,951 | 3,220 | 113 | 111 | |
ssz | Serratia symbiotica | 672 | 636 | 42 | 42 | |
smaf | Serratia sp. FGI94 | 4,361 | 3,030 | 151 | 124 | |
slq | Serratia liquefaciens | 4,894 | 3,226 | 109 | 105 | |
serf | Serratia sp. FS14 | 4,761 | 3,214 | 112 | 109 | |
sers | Serratia sp. SCBI | 4,672 | 3,132 | 103 | 101 | |
sfw | Serratia fonticola DSM 4576 | 5,098 | 3,485 | 106 | 105 | |
sfg | Serratia fonticola GS2 | 5,533 | 3,575 | 116 | 100 | |
srz | Serratia rubidaea | 4,486 | 3,002 | 96 | 85 | |
serm | Serratia sp. MYb239 | 4,548 | 3,069 | 115 | 98 | |
squ | Serratia quinivorans | 4,741 | 3,258 | 117 | 106 | |
sfj | Serratia ficaria | 4,661 | 3,195 | 113 | 96 | |
sof | Serratia odorifera | 5,568 | 3,245 | 110 | 93 | |
ssur | Serratia surfactantfaciens | 4,657 | 3,161 | 111 | 90 | |
suri | Serratia ureilytica | 4,674 | 3,192 | 122 | 98 | |
srhz | Serratia rhizosphaerae | 4,518 | 3,004 | 121 | 98 | |
senp | Serratia entomophila | 4,716 | 3,071 | 132 | 98 | |
snem | Serratia nematodiphila | 4,736 | 3,123 | 125 | 42 | |
snev | Serratia nevei | 5,531 | 3,274 | 126 | 73 | |
sgri | Serratia grimesii | 4,696 | 3,152 | 91 | 66 | |
ssar | Serratia sarumanii | 4,769 | 3,170 | 120 | 1 | |
serb | Serratia sp. B1 | 4,238 | 2,605 | 120 | 3 | |
Chania | ||||||
sfo | Chania multitudinisentens | 4,540 | 3,078 | 100 | 100 | |
Rahnella | ||||||
rah | Rahnella aceris Y9602 | 5,111 | 3,361 | 102 | 101 | |
race | Rahnella aceris ZF458 | 4,988 | 3,402 | 109 | 103 | |
raq | Rahnella aquatilis CIP 78.65 = ATCC 33071 | 4,866 | 3,319 | 140 | 112 | |
raa | Rahnella aquatilis HX2 | 5,082 | 3,372 | 98 | 98 | |
rox | Rahnella sikkimica | 4,867 | 3,197 | 104 | 92 | |
rvc | Rahnella victoriana | 4,831 | 3,304 | 111 | 92 | |
rbon | Rahnella bonaserana | 4,346 | 2,950 | 110 | 79 | |
riu | Rahnella inusitata | 4,898 | 3,180 | 105 | 77 | |
Gibbsiella | ||||||
gqu | Gibbsiella quercinecans | 4,756 | 3,405 | 115 | 102 | |
Fukatsuia | ||||||
fsm | Candidatus Fukatsuia symbiotica | 2,507 | 1,294 | 67 | 56 | |
Ewingella | ||||||
eame | Ewingella americana | 4,325 | 2,895 | 116 | 96 | |
Rouxiella | ||||||
rbad | Rouxiella badensis subsp. acadiensis | 4,503 | 3,076 | 109 | 94 | |
rcb | Rouxiella chamberiensis | 3,528 | 2,259 | 106 | 62 | |
Chimaeribacter | ||||||
caru | Chimaeribacter arupi | 4,376 | 2,798 | 115 | 103 | |
Nissabacter | ||||||
nig | Nissabacter sp. SGAir0207 | 4,403 | 2,880 | 113 | 106 | |
Prodigiosinella | ||||||
sera | Prodigiosinella confusarubida ATCC 39006 | 4,313 | 3,026 | 104 | 95 | |
serq | Prodigiosinella confusarubida ATCC 39006 | 4,314 | 3,025 | 104 | 95 | |
prod | Prodigiosinella aquatilis | 4,357 | 2,936 | 107 | 85 | |
Pectobacterium | ||||||
eca | Pectobacterium atrosepticum SCRI1043 | Ref | 4,472 | 2,947 | 119 | 110 |
patr | Pectobacterium atrosepticum JG10-08 | 4,254 | 2,935 | 100 | 100 | |
pato | Pectobacterium atrosepticum 21A | 4,414 | 2,962 | 142 | 121 | |
pct | Pectobacterium carotovorum subsp. carotovorum PC1 | 4,246 | 2,933 | 103 | 102 | |
pcc | Pectobacterium carotovorum subsp. carotovorum PCC21 | 4,263 | 2,883 | 98 | 98 | |
pcv | Pectobacterium odoriferum | 3,855 | 2,675 | 100 | 100 | |
pwa | Pectobacterium parmentieri WPP163 | 4,437 | 2,907 | 101 | 100 | |
ppar | Pectobacterium parmentieri RNS 08-42-1A | 4,395 | 2,924 | 107 | 103 | |
pec | Pectobacterium parmentieri SCC3193 | 4,705 | 2,987 | 99 | 99 | |
pws | Pectobacterium wasabiae | 4,368 | 2,885 | 107 | 103 | |
ppoa | Pectobacterium polaris | 4,221 | 2,927 | 104 | 103 | |
pbra | Pectobacterium brasiliense | 4,252 | 2,900 | 104 | 102 | |
ppuj | Pectobacterium punjabense | 4,172 | 2,890 | 108 | 103 | |
pari | Pectobacterium aroidearum | 4,271 | 2,958 | 108 | 103 | |
paqu | Pectobacterium aquaticum | 3,910 | 2,662 | 106 | 102 | |
pvz | Pectobacterium versatile | 4,307 | 2,945 | 142 | 121 | |
ppav | Pectobacterium parvum | 3,990 | 2,772 | 105 | 102 | |
pqu | Pectobacterium quasiaquaticum | 3,833 | 2,655 | 105 | 102 | |
ppoo | Pectobacterium polonicum | 4,178 | 2,899 | 105 | 103 | |
pcac | Pectobacterium cacticida | 3,539 | 2,579 | 104 | 102 | |
pacb | Pectobacterium actinidiae | 4,202 | 2,941 | 106 | 102 | |
pcoa | Pectobacterium colocasium | 2,819 | 1,128 | 109 | 103 | |
parl | Pectobacterium araliae | 4,124 | 2,809 | 99 | 99 | |
ppeu | Pectobacterium peruviense | 4,298 | 2,971 | 107 | 103 | |
Dickeya | ||||||
ddd | Dickeya dadantii 3937 | Ref | 4,549 | 2,947 | 116 | 112 |
dze | Dickeya chrysanthemi | 4,163 | 2,872 | 100 | 99 | |
ddc | Dickeya parazeae | 4,144 | 2,865 | 102 | 101 | |
dzc | Dickeya zeae | 3,919 | 2,733 | 111 | 111 | |
dso | Dickeya solani IPO 2222 | 4,059 | 2,920 | 105 | 101 | |
ced | Dickeya fangzhongdai ND14b | 4,155 | 2,963 | 98 | 98 | |
dfn | Dickeya fangzhongdai DSM 101947 | 4,298 | 2,946 | 104 | 101 | |
ddq | Dickeya dianthicola | 4,567 | 2,847 | 97 | 97 | |
daq | Dickeya aquatica | 4,079 | 2,629 | 98 | 98 | |
dic | Dickeya poaceiphila | 3,691 | 2,505 | 104 | 4 | |
dlc | Dickeya lacustris | 3,662 | 2,476 | 104 | 102 | |
Musicola | ||||||
dda | Musicola paradisiaca | 3,970 | 2,826 | 100 | 99 | |
Brenneria | ||||||
bgj | Brenneria goodwinii | 4,528 | 3,163 | 104 | 101 | |
brb | Brenneria rubrifaciens | 3,354 | 2,488 | 100 | 99 | |
bng | Brenneria nigrifluens | 4,336 | 3,041 | 101 | 98 | |
biz | Brenneria izadpanahii | 4,461 | 3,096 | 104 | 101 | |
Lonsdalea | ||||||
lbq | Lonsdalea britannica | 3,374 | 2,398 | 118 | 107 | |
lpop | Lonsdalea populi | 3,224 | 2,359 | 107 | 101 | |
Sodalis | ||||||
sgl | Sodalis glossinidius | 2,516 | 1,707 | 91 | 91 | |
sod | Sodalis praecaptivus | 4,282 | 2,970 | 104 | 103 | |
pes | Candidatus Sodalis pierantonius | 2,309 | 1,546 | 67 | 64 | |
seny | Sodalis endosymbiont of Henestaris halophilus | 713 | 553 | 55 | 48 | |
slig | Sodalis ligni | 5,293 | 3,029 | 112 | 100 | |
Erwinia | ||||||
eam | Erwinia amylovora CFBP1430 | Ref | 3,735 | 2,364 | 99 | 99 |
eay | Erwinia amylovora ATCC 49946 | 3,553 | 2,386 | 100 | 100 | |
eta | Erwinia tasmaniensis | 3,622 | 2,462 | 108 | 107 | |
epy | Erwinia pyrifoliae Ep1/96 | 3,697 | 2,421 | 97 | 97 | |
epr | Erwinia pyrifoliae DSM 12163 | 4,038 | 2,429 | 96 | 96 | |
ebi | Erwinia billingiae | 4,917 | 3,198 | 98 | 98 | |
erj | Erwinia sp. Ejp617 | 3,672 | 2,401 | 97 | 97 | |
epe | Erwinia persicina | 4,501 | 2,993 | 118 | 108 | |
ehd | Candidatus Erwinia haradaeae | 630 | 604 | 42 | 42 | |
erwi | Erwinia sorbitola | 4,158 | 2,909 | 123 | 107 | |
etp | Erwinia tracheiphila | 4,196 | 2,304 | 89 | 88 | |
erp | Erwinia rhapontici | 4,612 | 3,021 | 118 | 108 | |
epi | Erwinia pyri | 4,344 | 2,880 | 110 | 103 | |
erwe | Erwinia sp. E602 | 4,543 | 3,009 | 114 | 7 | |
Winslowiella | ||||||
eto | Winslowiella toletana | 4,388 | 2,934 | 111 | 107 | |
Duffyella | ||||||
ege | Duffyella gerundensis | 4,160 | 2,746 | 99 | 98 | |
Buchnera | ||||||
buc | Buchnera aphidicola APS (Acyrthosiphon pisum) | Ref | 574 | 549 | 36 | 31 |
bap | Buchnera aphidicola 5A (Acyrthosiphon pisum) | 555 | 535 | 37 | 37 | |
bau | Buchnera aphidicola Tuc7 (Acyrthosiphon pisum) | 553 | 533 | 37 | 37 | |
baw | Buchnera aphidicola JF98 (Acyrthosiphon pisum) | 477 | 411 | 35 | 35 | |
bajc | Buchnera aphidicola JF99 (Acyrthosiphon pisum) | 590 | 535 | 35 | 35 | |
bua | Buchnera aphidicola LL01 (Acyrthosiphon pisum) | 577 | 519 | 35 | 35 | |
bup | Buchnera aphidicola TLW03 (Acyrthosiphon pisum) | 573 | 515 | 35 | 35 | |
bak | Buchnera aphidicola Ak (Acyrthosiphon kondoi) | 569 | 545 | 38 | 38 | |
buh | Buchnera aphidicola Ua (Uroleucon ambrosiae) | 538 | 514 | 38 | 38 | |
bapf | Buchnera aphidicola F009 (Myzus persicae) | 573 | 550 | 35 | 35 | |
bapg | Buchnera aphidicola G002 (Myzus persicae) | 572 | 549 | 35 | 35 | |
bapu | Buchnera aphidicola USDA (Myzus persicae) | 575 | 552 | 35 | 35 | |
bapw | Buchnera aphidicola W106 (Myzus persicae) | 573 | 550 | 35 | 35 | |
bas | Buchnera aphidicola Sg (Schizaphis graminum) | 545 | 525 | 37 | 37 | |
bab | Buchnera aphidicola Bp (Baizongia pistaciae) | 507 | 484 | 37 | 37 | |
bcc | Buchnera aphidicola BCc | 362 | 345 | 37 | 37 | |
baj | Buchnera aphidicola (Cinara tujafilina) | 359 | 345 | 35 | 35 | |
baph | Buchnera aphidicola (Aphis glycines) | 562 | 535 | 35 | 35 | |
Wigglesworthia | ||||||
wbr | Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis | 611 | 585 | 40 | 40 | |
wgl | Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitan | 618 | 590 | 44 | 44 | |
Pantoea | ||||||
pam | Pantoea ananatis LMG 20103 | 4,241 | 2,954 | 108 | 105 | |
plf | Pantoea ananatis LMG 5342 | 4,664 | 2,969 | 99 | 99 | |
paj | Pantoea ananatis AJ13355 | 4,067 | 2,947 | 100 | 100 | |
paq | Pantoea ananatis PA13 | 4,372 | 2,989 | 105 | 105 | |
pva | Pantoea vagans C9-1 | 4,590 | 2,952 | 99 | 99 | |
pagg | Pantoea vagans FDAARGOS_160 | 4,323 | 2,892 | 107 | 102 | |
pao | Pantoea sp. At-9b | 5,770 | 3,706 | 107 | 105 | |
kln | Pantoea rwandensis | 3,795 | 2,729 | 102 | 102 | |
pant | Pantoea sp. PSNIH1 | 3,956 | 2,648 | 104 | 101 | |
panp | Pantoea sp. PSNIH2 | 4,378 | 2,882 | 106 | 105 | |
hhs | Candidatus Pantoea carbekii | 825 | 738 | 48 | 48 | |
pck | Candidatus Pantoea carbekii US | 801 | 754 | 49 | 49 | |
pagc | Pantoea agglomerans C410P1 | 4,394 | 2,891 | 107 | 102 | |
pstw | Pantoea stewartii subsp. stewartii | 4,883 | 2,990 | 100 | 97 | |
palh | Pantoea alhagi | 3,904 | 2,728 | 116 | 109 | |
pans | Pantoea sp. SO10 | 4,531 | 3,197 | 105 | 104 | |
pey | Pantoea eucalypti | 4,273 | 2,875 | 117 | 101 | |
pdis | Candidatus Pantoea soli | 4,114 | 2,854 | 111 | 106 | |
per | Pantoea eucrina | 3,468 | 2,514 | 107 | 105 | |
pji | Pantoea jilinensis | 4,139 | 2,859 | 109 | 102 | |
pano | Pantoea anthophila | 4,108 | 2,811 | 106 | 103 | |
kpie | Pantoea piersonii | 4,320 | 2,873 | 110 | 104 | |
palf | Pantoea alfalfae | 4,221 | 2,916 | 114 | 103 | |
ppho | Pantoea phytobeneficialis | 5,209 | 3,446 | 81 | 80 | |
pdip | Pantoea dispersa | 4,538 | 3,032 | 115 | 106 | |
pane | Pantoea sp. X85 | 4,477 | 3,095 | 105 | 6 | |
pamt | Pantoea sp. MT58 | 4,214 | 2,882 | 109 | ||
panz | Pantoea sp. SOD02 | 4,612 | 3,214 | 105 | ||
Mixta | ||||||
pgz | Mixta gaviniae | 3,935 | 2,718 | 116 | 110 | |
pcd | Mixta calida | 3,799 | 2,668 | 115 | 108 | |
mint | Mixta intestinalis | 4,332 | 2,857 | 108 | 106 | |
mthi | Mixta theicola | 4,105 | 2,853 | 110 | 107 | |
mhan | Mixta hanseatica | 4,015 | 2,759 | 113 | 109 | |
Tatumella | ||||||
tci | Tatumella citrea | 4,035 | 2,792 | 121 | 106 | |
tpty | Tatumella ptyseos | 3,719 | 2,255 | 105 | 102 | |
tatu | Tatumella sp. TA1 | 3,126 | 2,149 | 98 | 96 | |
Paramixta | ||||||
pmak | Paramixta manurensis | 4,363 | 2,892 | 104 | 103 | |
Photorhabdus | ||||||
plu | Photorhabdus laumondii subsp. laumondii TTO1 | 4,683 | 2,601 | 107 | 107 | |
plum | Photorhabdus laumondii subsp. laumondii DSPV002N | 4,623 | 2,594 | 120 | 110 | |
pay | Photorhabdus asymbiotica | 4,417 | 2,487 | 107 | 106 | |
ptt | Photorhabdus thracensis | 4,002 | 2,434 | 99 | 99 | |
pakh | Photorhabdus akhurstii | 4,611 | 2,526 | 132 | 112 | |
plui | Photorhabdus luminescens | 4,666 | 2,551 | 132 | 113 | |
Proteus | ||||||
pmr | Proteus mirabilis HI4320 | 3,662 | 2,438 | 105 | 105 | |
pmib | Proteus mirabilis BB2000 | 3,455 | 2,362 | 103 | 103 | |
pvl | Proteus mirabilis CYPV1 | 3,182 | 2,316 | 103 | 103 | |
pvg | Proteus vulgaris | 3,459 | 2,421 | 111 | 110 | |
phau | Proteus hauseri | 3,431 | 2,383 | 111 | 109 | |
prot | Proteus sp. CD3 | 3,473 | 2,437 | 111 | 110 | |
pcol | Proteus columbae | 3,639 | 2,449 | 112 | 110 | |
pcib | Proteus terrae subsp. cibarius | 3,848 | 2,499 | 112 | 110 | |
ppee | Proteus penneri | 3,293 | 2,310 | 120 | 118 | |
papp | Proteus appendicitidis | 3,598 | 2,439 | 111 | 110 | |
Xenorhabdus | ||||||
xbo | Xenorhabdus bovienii SS-2004 | 4,320 | 2,250 | 113 | 113 | |
xbv | Xenorhabdus bovienii CS03 | 4,754 | 2,323 | 125 | 109 | |
xne | Xenorhabdus nematophila ATCC 19061 | 4,549 | 2,329 | 109 | 109 | |
xnm | Xenorhabdus nematophila AN6/1 | 4,583 | 2,343 | 122 | 111 | |
xdo | Xenorhabdus doucetiae | 3,849 | 2,215 | 122 | 111 | |
xpo | Xenorhabdus poinarii | 3,607 | 2,055 | 122 | 111 | |
xho | Xenorhabdus hominickii | 3,851 | 2,235 | 113 | 112 | |
xbu | Xenorhabdus budapestensis | 3,596 | 2,221 | 104 | 103 | |
xgr | Xenorhabdus griffiniae | 3,947 | 2,275 | 107 | 106 | |
Providencia | ||||||
psi | Providencia stuartii MRSN 2154 | 4,099 | 2,566 | 95 | 95 | |
psx | Providencia stuartii ATCC 33672 | 3,881 | 2,578 | 102 | 102 | |
psta | Providencia stuartii BE2467 | 4,105 | 2,587 | 106 | 105 | |
ptha | Providencia stuartii 2017-45-35 | 4,288 | 2,609 | 105 | 104 | |
prg | Providencia rettgeri | 4,484 | 2,801 | 100 | 100 | |
pala | Providencia alcalifaciens | 3,609 | 2,422 | 110 | 105 | |
phei | Providencia heimbachae | 3,806 | 2,587 | 100 | 99 | |
prq | Providencia huaxiensis | 4,315 | 2,762 | 103 | 102 | |
prj | Providencia rustigianii | 3,809 | 2,432 | 102 | 102 | |
pvc | Providencia vermicola | 3,898 | 2,583 | 104 | 103 | |
pmag | Providencia manganoxydans | 3,814 | 2,496 | 109 | 103 | |
phag | Providencia hangzhouensis | 4,111 | 2,710 | 104 | 103 | |
pzj | Providencia zhijiangensis | 3,368 | 2,346 | 105 | 103 | |
Morganella | ||||||
mmk | Morganella morganii | 3,526 | 2,408 | 98 | 98 | |
Arsenophonus | ||||||
asy | Candidatus Arsenophonus lipoptenae | 625 | 598 | 40 | 40 | |
aen | Arsenophonus endosymbiont of Aleurodicus dispersus | 381 | 359 | 47 | 41 | |
ans | Arsenophonus nasoniae | 5,555 | 2,342 | 94 | 93 | |
aed | Arsenophonus endosymbiont of Aphis craccivora | 1,775 | 1,149 | 78 | 75 | |
aet | Arsenophonus apicola ArsBeeUS | 3,190 | 1,885 | 100 | 93 | |
aapc | Arsenophonus apicola aApi_AU | 2,823 | 1,892 | 97 | 90 | |
Moellerella | ||||||
mwi | Moellerella wisconsensis | 3,403 | 2,247 | 107 | 106 | |
Edwardsiella | ||||||
eic | Edwardsiella ictaluri | 3,735 | 2,392 | 119 | 119 | |
etd | Edwardsiella tarda | 3,256 | 2,431 | 120 | 120 | |
ete | Edwardsiella anguillarum | 4,222 | 2,586 | 119 | 117 | |
etr | Edwardsiella piscicida EIB202 | 3,589 | 2,430 | 120 | 120 | |
etc | Edwardsiella piscicida C07-087 | 3,405 | 2,483 | 120 | 119 | |
edw | Edwardsiella sp. EA181011 | 3,122 | 2,349 | 121 | 120 | |
edl | Edwardsiella sp. LADL05-105 | 3,603 | 2,514 | 134 | 129 | |
eho | Edwardsiella hoshinae | 3,204 | 2,435 | 138 | 131 | |
Hafnia | ||||||
hav | Hafnia alvei | 4,063 | 2,962 | 118 | 117 | |
hpar | Hafnia paralvei | 3,968 | 2,894 | 122 | 115 | |
Obesumbacterium | ||||||
opo | Obesumbacterium proteus | 4,424 | 2,997 | 124 | 117 | |
Limnobaculum | ||||||
lpv | Limnobaculum parvum | 3,073 | 2,202 | 98 | 94 | |
prag | Limnobaculum zhutongyuii | 3,947 | 2,496 | 98 | 94 | |
Pragia | ||||||
pfq | Pragia fontium | 3,338 | 2,290 | 95 | 94 | |
Leminorella | ||||||
lri | Leminorella richardii | 3,579 | 2,382 | 94 | 92 | |
lgb | Leminorella grimontii | 3,819 | 2,454 | 97 | 5 | |
Gallaecimonas | ||||||
gkn | Gallaecimonas kandeliae | 3,628 | 2,098 | 108 | 63 | |
unclassified Enterobacterales | ||||||
ebo | Enterobacterales bacterium endosymbiont of Anomoneura mori | 213 | 209 | 30 | ||
other Gammaproteobacteria | ||||||
Haemophilus | ||||||
hin | Haemophilus influenzae Rd KW20 (serotype d) | Ref | 1,709 | 1,328 | 36 | 36 |
hit | Haemophilus influenzae 86-028NP (nontypeable) | 1,792 | 1,350 | 77 | 77 | |
hip | Haemophilus influenzae PittEE (nontypeable) | 1,619 | 1,274 | 76 | 76 | |
hiq | Haemophilus influenzae PittGG (nontypeable) | 1,667 | 1,236 | 74 | 74 | |
hif | Haemophilus influenzae F3031 (nontypeable) | 1,768 | 1,329 | 62 | 61 | |
hil | Haemophilus influenzae F3047 (nontypeable) | 1,786 | 1,342 | 57 | 57 | |
hiu | Haemophilus influenzae 10810 (serotype b) | 1,903 | 1,397 | |||
hie | Haemophilus influenzae R2846 (nontypeable) | 1,636 | 1,345 | 79 | 78 | |
hiz | Haemophilus influenzae R2866 (nontypeable) | 1,795 | 1,373 | 81 | 80 | |
hik | Haemophilus influenzae KR494 (serotype f) | 1,742 | 1,370 | 78 | 78 | |
hia | Haemophilus influenzae CGSHiCZ412602 | 1,723 | 1,348 | 81 | 81 | |
hih | Haemophilus influenzae Hi375 | 1,699 | 1,343 | 79 | 79 | |
hiw | Haemophilus influenzae 477 | 1,720 | 1,345 | 79 | 79 | |
hic | Haemophilus influenzae C486 | 1,697 | 1,367 | 77 | 77 | |
hix | Haemophilus influenzae 723 | 1,782 | 1,346 | 79 | 79 | |
hpr | Haemophilus parainfluenzae | 1,979 | 1,457 | |||
hdu | Haemophilus ducreyi | Ref | 1,717 | 1,136 | 64 | 64 |
hay | Haemophilus sp. oral taxon 036 | 1,617 | 1,343 | 80 | 79 | |
hpit | Haemophilus pittmaniae | 1,975 | 1,471 | 80 | 78 | |
hhz | Haemophilus haemolyticus | 1,774 | 1,357 | 80 | 79 | |
haeg | Haemophilus aegyptius | 1,962 | 1,381 | 76 | 76 | |
hpaa | Haemophilus parahaemolyticus | 1,876 | 1,424 | 82 | 81 | |
hsem | Haemophilus seminalis | 1,731 | 1,367 | 81 | 80 | |
Glaesserella | ||||||
hap | Glaesserella parasuis SH0165 | 2,031 | 1,450 | 76 | 76 | |
hpaz | Glaesserella parasuis ZJ0906 | 2,211 | 1,450 | 78 | 78 | |
hpas | Glaesserella parasuis SH03 | 1,979 | 1,422 | 79 | 79 | |
hpak | Glaesserella parasuis KL0318 | 1,997 | 1,453 | 77 | 77 | |
gle | Glaesserella sp. 15-184 | 2,174 | 1,549 | 83 | 82 | |
Histophilus | ||||||
hso | Histophilus somni 129PT | 1,798 | 1,362 | 65 | 64 | |
hsm | Histophilus somni 2336 | 1,980 | 1,423 | 65 | 65 | |
Pasteurella | ||||||
pmu | Pasteurella multocida subsp. multocida Pm70 | Ref | 2,014 | 1,612 | ||
pmv | Pasteurella multocida subsp. multocida HN06 | 2,265 | 1,636 | 75 | 73 | |
pul | Pasteurella multocida subsp. multocida 3480 | 2,229 | 1,642 | 73 | 73 | |
pmp | Pasteurella multocida 36950 | 2,098 | 1,643 | 73 | 73 | |
pmul | Pasteurella multocida ATCC 43137 | 2,041 | 1,611 | 77 | 77 | |
pdag | Pasteurella dagmatis | 2,011 | 1,573 | 77 | 77 | |
psky | Pasteurella skyensis | 2,046 | 1,390 | 67 | 65 | |
patl | Pasteurella atlantica | 2,094 | 1,415 | 70 | 69 | |
pcai | Pasteurella canis | 1,998 | 1,562 | 81 | 79 | |
Basfia | ||||||
msu | Mannheimia succiniciproducens | 2,384 | 1,635 | 79 | 79 | |
bsun | Basfia succiniciproducens | 1,992 | 1,628 | 79 | 78 | |
Mannheimia | ||||||
mht | Mannheimia haemolytica USDA-ARS-USMARC-185 | 2,340 | 1,631 | 85 | 84 | |
mhq | Mannheimia haemolytica USDA-ARS-USMARC-183 | 2,531 | 1,663 | 89 | 88 | |
mhat | Mannheimia haemolytica USDA-ARS-USMARC-184 | 2,323 | 1,634 | 86 | 85 | |
mhx | Mannheimia haemolytica M42548 | 2,728 | 1,679 | 81 | 81 | |
mhae | Mannheimia haemolytica D153 | 2,641 | 1,659 | 82 | 82 | |
mham | Mannheimia haemolytica D171 | 2,339 | 1,595 | 80 | 80 | |
mhao | Mannheimia haemolytica D174 | 2,687 | 1,652 | 85 | 85 | |
mhal | Mannheimia haemolytica USMARC_2286 | 2,698 | 1,678 | 83 | 83 | |
mhaq | Mannheimia haemolytica 89010807N | 2,606 | 1,685 | 86 | 86 | |
mhay | Mannheimia haemolytica 89010807N lktA- | 2,603 | 1,682 | 86 | 86 | |
mvr | Mannheimia sp. USDA-ARS-USMARC-1261 | 2,381 | 1,612 | 81 | 81 | |
mvi | Mannheimia varigena USDA-ARS-USMARC-1296 | 2,109 | 1,596 | 81 | 81 | |
mvg | Mannheimia varigena USDA-ARS-USMARC-1312 | 1,982 | 1,558 | 80 | 80 | |
mve | Mannheimia varigena USDA-ARS-USMARC-1388 | 2,096 | 1,594 | 80 | 80 | |
mgra | Mannheimia granulomatis | 2,024 | 1,546 | 82 | 81 | |
mbos | Mannheimia bovis | 2,029 | 1,524 | 85 | 84 | |
mpeg | Mannheimia pernigra 17CN0883 | 1,924 | 1,468 | 84 | 83 | |
mann | Mannheimia pernigra ZY170218 | 1,952 | 1,457 | 80 | 79 | |
Actinobacillus | ||||||
apl | Actinobacillus pleuropneumoniae L20 (serotype 5b) | Ref | 2,012 | 1,584 | 80 | 80 |
apj | Actinobacillus pleuropneumoniae JL03 (serotype 3) | 2,036 | 1,590 | 82 | 82 | |
apa | Actinobacillus pleuropneumoniae AP76 (serotype 7) | 2,142 | 1,638 | 78 | 78 | |
asu | Actinobacillus succinogenes | 2,079 | 1,632 | 82 | 82 | |
asi | Actinobacillus suis H91-0380 | 2,249 | 1,679 | 78 | 78 | |
ass | Actinobacillus suis ATCC 33415 | 2,246 | 1,686 | 84 | 84 | |
aeu | Actinobacillus equuli subsp. equuli | 2,171 | 1,613 | 82 | 82 | |
apor | Actinobacillus porcitonsillarum | 2,033 | 1,544 | 81 | 80 | |
aio | Actinobacillus indolicus | 2,054 | 1,587 | 81 | 80 | |
adp | Actinobacillus delphinicola | 1,626 | 1,257 | 85 | 84 | |
alig | Actinobacillus lignieresii | 2,342 | 1,652 | 82 | 81 | |
aart | Actinobacillus arthritidis | 1,684 | 1,228 | 84 | 83 | |
agp | Actinobacillus genomosp. 1 | 2,156 | 1,645 | 84 | 83 | |
agk | Actinobacillus genomosp. 2 | 1,770 | 1,293 | 79 | 78 | |
Aggregatibacter | ||||||
aap | Aggregatibacter aphrophilus NJ8700 | 2,231 | 1,558 | 76 | 76 | |
aaz | Aggregatibacter aphrophilus W10433 | 2,098 | 1,603 | 77 | 77 | |
aat | Aggregatibacter actinomycetemcomitans D11S-1 | 1,975 | 1,502 | 74 | 74 | |
aao | Aggregatibacter actinomycetemcomitans ANH9381 | 2,058 | 1,531 | 69 | 69 | |
aan | Aggregatibacter actinomycetemcomitans D7S-1 | 2,041 | 1,517 | 73 | 73 | |
aah | Aggregatibacter actinomycetemcomitans HK1651 | 2,327 | 1,519 | 74 | 74 | |
aacn | Aggregatibacter actinomycetemcomitans NUM4039 | 2,364 | 1,579 | 73 | 63 | |
aact | Aggregatibacter actinomycetemcomitans 624 | 2,164 | 1,547 | 74 | 74 | |
aseg | Aggregatibacter segnis | 1,872 | 1,402 | 78 | 77 | |
agj | Aggregatibacter sp. oral taxon 513 | 1,787 | 1,396 | 80 | 79 | |
Gallibacterium | ||||||
gan | Gallibacterium anatis | 2,500 | 1,748 | 76 | 76 | |
gss | Gallibacterium salpingitidis | 2,608 | 1,779 | 86 | 85 | |
Bibersteinia | ||||||
bto | Bibersteinia trehalosi USDA-ARS-USMARC-192 | 2,250 | 1,604 | 75 | 75 | |
btre | Bibersteinia trehalosi USDA-ARS-USMARC-188 | 2,146 | 1,581 | 75 | 75 | |
btrh | Bibersteinia trehalosi USDA-ARS-USMARC-189 | 2,373 | 1,608 | 75 | 75 | |
btra | Bibersteinia trehalosi USDA-ARS-USMARC-190 | 2,301 | 1,590 | 76 | 76 | |
Avibacterium | ||||||
apag | Avibacterium paragallinarum | 2,142 | 1,499 | 79 | 78 | |
avt | Avibacterium volantium | 2,078 | 1,648 | 76 | 76 | |
Rodentibacter | ||||||
rpne | Rodentibacter pneumotropicus | 3,867 | 1,393 | 78 | 78 | |
rhey | Rodentibacter caecimuris | 2,344 | 1,604 | 83 | 82 | |
rhae | Rodentibacter haemolyticus | 2,236 | 1,571 | 84 | 83 | |
Otariodibacter | ||||||
ooi | Otariodibacter oris | 1,827 | 1,408 | 79 | 78 | |
Frederiksenia | ||||||
fcl | Frederiksenia canicola | 1,934 | 1,487 | 78 | 77 | |
Bisgaardia | ||||||
bhud | Bisgaardia hudsonensis | 1,848 | 1,482 | 80 | 79 | |
Mergibacter | ||||||
msep | Mergibacter septicus | 1,624 | 1,270 | 79 | 78 | |
unclassified Pasteurellaceae | ||||||
paet | Pasteurella aerogenes | 2,058 | 1,621 | 77 | 77 | |
pban | Pasteurellaceae bacterium NI1060 | 2,448 | 1,580 | 81 | 80 | |
Xylella | ||||||
xfa | Xylella fastidiosa 9a5c | Ref | 2,832 | 1,329 | 56 | 56 |
xft | Xylella fastidiosa Temecula1 | 2,036 | 1,266 | 57 | 57 | |
xfm | Xylella fastidiosa M12 | 2,104 | 1,270 | 59 | 58 | |
xfn | Xylella fastidiosa M23 | 2,201 | 1,285 | 60 | 58 | |
xff | Xylella fastidiosa subsp. fastidiosa GB514 | 2,216 | 1,226 | 55 | 55 | |
xfl | Xylella fastidiosa MUL0034 | 2,442 | 1,283 | 56 | 55 | |
xfs | Xylella fastidiosa subsp. sandyi Ann-1 | 2,639 | 1,299 | 57 | 55 | |
xfh | Xylella fastidiosa Hib4 | 2,388 | 1,339 | 58 | 57 | |
xtw | Xylella taiwanensis | 2,086 | 1,203 | 56 | 55 | |
Xanthomonas | ||||||
xcc | Xanthomonas campestris pv. campestris ATCC 33913 | Ref | 4,181 | 2,293 | 61 | 61 |
xcb | Xanthomonas campestris pv. campestris 8004 | 4,273 | 2,300 | 61 | 59 | |
xca | Xanthomonas campestris pv. campestris B100 | 4,467 | 2,301 | 62 | 60 | |
xcp | Xanthomonas campestris pv. raphani | 4,520 | 2,250 | 63 | 61 | |
xcv | Xanthomonas euvesicatoria pv. vesicatoria | 4,726 | 2,476 | 56 | 55 | |
xax | Xanthomonas euvesicatoria pv. citrumelo F1 | 4,181 | 2,286 | 60 | 59 | |
xac | Xanthomonas citri pv. citri 306 | Ref | 4,429 | 2,362 | 62 | 61 |
xci | Xanthomonas citri subsp. citri Aw12879 | 4,760 | 2,355 | 60 | 59 | |
xct | Xanthomonas citri subsp. citri A306 | 4,474 | 2,354 | 72 | 62 | |
xcj | Xanthomonas citri subsp. citri UI6 | 4,424 | 2,345 | 72 | 62 | |
xcu | Xanthomonas citri pv. citri UI7 | 4,422 | 2,343 | 72 | 62 | |
xcn | Xanthomonas citri pv. citri NT17 | 4,471 | 2,354 | 71 | 62 | |
xcw | Xanthomonas citri pv. citri MN10 | 4,428 | 2,342 | 72 | 62 | |
xcr | Xanthomonas citri pv. citri MN11 | 4,423 | 2,344 | 72 | 62 | |
xcm | Xanthomonas citri pv. citri MN12 | 4,424 | 2,343 | 72 | 62 | |
xcf | Xanthomonas citri pv. citri mf20 | 4,463 | 2,352 | 71 | 62 | |
xfu | Xanthomonas citri pv. fuscans | 4,083 | 2,280 | 60 | 59 | |
xao | Xanthomonas axonopodis Xac29-1 | 4,404 | 2,327 | 62 | 59 | |
xom | Xanthomonas oryzae pv. oryzae MAFF 311018 | Ref | 4,372 | 2,200 | 59 | 59 |
xoo | Xanthomonas oryzae pv. oryzae KACC 10331 | 4,538 | 2,216 | 56 | 56 | |
xop | Xanthomonas oryzae pv. oryzae PXO99A | 4,951 | 2,314 | 60 | 60 | |
xoy | Xanthomonas oryzae pv. oryzae PXO86 | 4,500 | 2,201 | 60 | 60 | |
xor | Xanthomonas oryzae pv. oryzicola BLS256 | 4,473 | 2,250 | 60 | 59 | |
xoz | Xanthomonas oryzae pv. oryzicola CFBP7342 | 4,016 | 2,269 | 63 | 62 | |
xal | Xanthomonas albilineans | 3,208 | 1,887 | 57 | 57 | |
xsa | Xanthomonas sacchari | 3,757 | 2,132 | 62 | 61 | |
xtn | Xanthomonas translucens pv. undulosa | 3,528 | 2,113 | 61 | 61 | |
xgm | Xanthomonas graminis | 3,674 | 2,135 | 63 | 62 | |
xcs | Xanthomonas cerealis | 3,622 | 2,024 | 65 | 64 | |
xfr | Xanthomonas fragariae | 3,388 | 1,942 | 144 | 61 | |
xve | Xanthomonas vesicatoria | 4,416 | 2,314 | 108 | 64 | |
xpe | Xanthomonas perforans | 4,519 | 2,391 | 95 | 62 | |
xhr | Xanthomonas hortorum | 4,260 | 2,286 | 99 | 62 | |
xga | Xanthomonas hortorum pv. gardneri | 4,674 | 2,357 | 100 | 63 | |
xph | Xanthomonas phaseoli | 4,114 | 2,321 | 89 | 62 | |
xva | Xanthomonas vasicola pv. vasculorum | 3,981 | 2,187 | 148 | 62 | |
xan | Xanthomonas sp. ISO98C4 | 4,389 | 2,468 | 61 | 60 | |
xar | Xanthomonas arboricola | 4,251 | 2,289 | 60 | 60 | |
xhy | Xanthomonas hyacinthi | 4,011 | 2,239 | 63 | 62 | |
xcz | Xanthomonas cucurbitae | 3,673 | 2,129 | 69 | 62 | |
xth | Xanthomonas theicola | 3,766 | 2,076 | 61 | 59 | |
xeu | Xanthomonas euroxanthea | 4,014 | 2,223 | 80 | ||
xhd | Xanthomonas hydrangeae | 4,386 | 2,315 | |||
xpr | Xanthomonas prunicola | 4,149 | 2,154 | 125 | 62 | |
xag | Xanthomonas sp. GW | 4,358 | 2,237 | 67 | 60 | |
xdy | Xanthomonas dyei | 4,304 | 2,296 | 209 | 62 | |
xas | Xanthomonas sp. SS | 4,227 | 2,259 | 64 | 59 | |
xha | Xanthomonas hawaiiensis | 4,059 | 2,201 | 65 | 64 | |
xry | Xanthomonas rydalmerensis | 4,183 | 2,218 | 67 | 62 | |
xso | Xanthomonas sontii | 4,154 | 2,215 | 63 | 62 | |
xin | Xanthomonas indica | 3,999 | 2,198 | 69 | 62 | |
xai | Xanthomonas sp. SI | 4,290 | 2,238 | 70 | 61 | |
xaz | Xanthomonas sp. CPBF 426 | 4,010 | 2,232 | 77 | 62 | |
xts | Xanthomonas tesorieronis | 4,411 | 2,263 | 67 | ||
xmd | Xanthomonas medicagonis | 4,466 | 2,249 | 65 | ||
xbn | Xanthomonas bundabergensis | 4,534 | 2,344 | 66 | ||
Stenotrophomonas | ||||||
sml | Stenotrophomonas maltophilia K279a | 4,386 | 2,307 | |||
smt | Stenotrophomonas maltophilia R551-3 | 4,039 | 2,236 | 90 | 88 | |
buj | Stenotrophomonas maltophilia JV3 | 4,063 | 2,219 | 90 | 88 | |
smz | Stenotrophomonas maltophilia D457 | 4,101 | 2,258 | 109 | 87 | |
sfoe | Stenotrophomonas forensis | 4,274 | 2,235 | 91 | 88 | |
sacz | Stenotrophomonas acidaminiphila | 3,617 | 2,031 | 98 | 73 | |
stek | Stenotrophomonas sp. KCTC 12332 | 3,699 | 2,083 | 85 | 84 | |
srh | Stenotrophomonas rhizophila | 3,657 | 2,051 | 73 | 73 | |
slm | Stenotrophomonas sp. LM091 | 3,683 | 2,081 | 84 | 82 | |
sten | Stenotrophomonas sp. WZN-1 | 4,074 | 2,218 | 90 | 88 | |
stem | Stenotrophomonas sp. MYb57 | 4,135 | 2,211 | 88 | 87 | |
stes | Stenotrophomonas sp. ASS1 | 4,065 | 2,235 | 81 | 78 | |
sinc | Stenotrophomonas indicatrix | 4,108 | 2,214 | 90 | 85 | |
spaq | Stenotrophomonas pavanii | 4,149 | 2,229 | 83 | 81 | |
steq | Stenotrophomonas sp. 169 | 3,500 | 1,925 | 80 | 79 | |
sgen | Stenotrophomonas geniculata | 4,154 | 2,230 | 90 | 88 | |
sou | Stenotrophomonas oahuensis | 4,098 | 2,085 | 80 | 77 | |
sarc | Stenotrophomonas aracearum | 3,723 | 2,050 | 83 | 81 | |
scyc | Stenotrophomonas cyclobalanopsidis | 3,667 | 2,047 | 92 | 89 | |
stej | Stenotrophomonas sp. SBJS02 | 4,226 | 2,167 | 88 | 86 | |
steo | Stenotrophomonas sp. Pemsol | 3,907 | 2,144 | 74 | 1 | |
stez | Stenotrophomonas sp. P2112 | 3,903 | 2,152 | 90 | 1 | |
Pseudoxanthomonas | ||||||
psu | Pseudoxanthomonas suwonensis 11-1 | 3,070 | 1,843 | 62 | 61 | |
psuw | Pseudoxanthomonas suwonensis J1 | 3,065 | 1,856 | 50 | 50 | |
psd | Pseudoxanthomonas spadix | 3,149 | 1,882 | 53 | 53 | |
pmex | Pseudoxanthomonas mexicana | 3,575 | 1,968 | 62 | 60 | |
pjp | Pseudoxanthomonas japonensis | 3,834 | 2,000 | 59 | 57 | |
pdd | Pseudoxanthomonas daejeonensis | 3,079 | 1,809 | 52 | 51 | |
pwi | Pseudoxanthomonas winnipegensis | 3,779 | 2,065 | 63 | 61 | |
psse | Pseudoxanthomonas sp. SE1 | 3,825 | 1,985 | 60 | 57 | |
pkq | Pseudoxanthomonas koreensis | 2,618 | 1,635 | 52 | ||
Lysobacter | ||||||
lab | Lysobacter antibioticus 76 | 5,143 | 2,193 | 57 | 54 | |
laq | Lysobacter antibioticus ATCC 29479 | 5,174 | 2,174 | 61 | 61 | |
lcp | Lysobacter capsici | 5,685 | 2,357 | 58 | 56 | |
lgu | Lysobacter gummosus | 5,322 | 2,368 | 57 | 55 | |
lez | Lysobacter enzymogenes C3 | 5,529 | 2,317 | 65 | 63 | |
lem | Lysobacter enzymogenes M497-1 | 4,891 | 2,288 | 61 | 59 | |
lyt | Lysobacter sp. TY2-98 | 2,923 | 1,640 | 58 | 57 | |
lsol | Lysobacter soli | 3,635 | 1,970 | 60 | 57 | |
laux | Lysobacter auxotrophicus | 3,728 | 1,930 | 56 | 54 | |
lya | Lysobacter yananisis | 4,981 | 2,236 | 71 | 67 | |
lsy | Lysobacter soyae | 2,007 | 1,329 | 49 | 48 | |
lare | Lysobacter arenosi | 3,449 | 1,875 | 60 | 57 | |
lhx | Lysobacter helvus | 3,156 | 1,564 | 61 | 54 | |
lyw | Lysobacter sp. CW239 | 2,598 | 1,614 | 57 | 56 | |
Noviluteimonas | ||||||
lcas | Noviluteimonas caseinilytica | 3,153 | 1,564 | 61 | 54 | |
Novilysobacter | ||||||
lcic | Novilysobacter ciconiae | 2,540 | 1,613 | 58 | 57 | |
lavi | Novilysobacter avium | 2,479 | 1,541 | 58 | 57 | |
llz | Novilysobacter luteus | 2,513 | 1,515 | 69 | 55 | |
Marilutibacter | ||||||
lyj | Marilutibacter alkalisoli | 3,265 | 1,830 | 59 | 56 | |
lmb | Marilutibacter maris | 3,132 | 1,842 | 64 | 61 | |
Agrilutibacter | ||||||
lsf | Agrilutibacter solisilvae | 3,229 | 1,584 | 59 | 58 | |
lsx | Agrilutibacter terrestris | 2,873 | 1,640 | 58 | 57 | |
Solilutibacter | ||||||
lue | Solilutibacter oculi | 2,356 | 1,447 | 53 | 51 | |
Luteimonas | ||||||
lum | Luteimonas chenhongjianii | 2,888 | 1,755 | 60 | 59 | |
lus | Luteimonas yindakuii | 2,685 | 1,635 | 58 | 57 | |
lug | Luteimonas granuli | 2,481 | 1,579 | 53 | 52 | |
lfx | Luteimonas fraxinea | 3,533 | 1,858 | 61 | 59 | |
luj | Luteimonas sp. JM171 | 2,672 | 1,621 | 52 | 51 | |
Thermomonas | ||||||
thes | Thermomonas aquatica | 2,761 | 1,649 | 59 | 56 | |
theh | Thermomonas sp. HDW16 | 2,584 | 1,589 | 57 | 56 | |
tcn | Thermomonas carbonis | 3,041 | 1,719 | 59 | 56 | |
tbv | Thermomonas brevis | 3,081 | 1,788 | 57 | 56 | |
thex | Thermomonas sp. XSG | 2,786 | 1,688 | 56 | 55 | |
Pseudolysobacter | ||||||
xbc | Pseudolysobacter antarcticus | 3,916 | 1,999 | 59 | 56 | |
Frateuria | ||||||
fau | Frateuria aurantia | 3,101 | 1,909 | 88 | 87 | |
fsg | Frateuria soli | 3,105 | 1,751 | 59 | 58 | |
fed | Frateuria edaphi | 3,393 | 1,792 | 60 | 58 | |
Rhodanobacter | ||||||
rhd | Rhodanobacter denitrificans | 3,824 | 2,083 | 59 | 58 | |
rgl | Rhodanobacter glycinis | 3,471 | 1,957 | 60 | 58 | |
rth | Rhodanobacter thiooxydans | 3,706 | 2,004 | 60 | 58 | |
Dyella | ||||||
dji | Dyella jiangningensis | 4,666 | 2,418 | 59 | 57 | |
dja | Dyella japonica | 3,811 | 2,113 | 57 | 57 | |
dtx | Dyella thiooxydans | 3,862 | 2,075 | 55 | 55 | |
dye | Dyella sp. M7H15-1 | 3,019 | 1,726 | 57 | 56 | |
dcs | Dyella caseinilytica | 4,128 | 2,204 | 58 | 57 | |
dtl | Dyella telluris | 4,255 | 2,214 | 61 | 59 | |
dta | Dyella terrae | 4,841 | 2,161 | 80 | 58 | |
dyg | Dyella sp. GSA-30 | 4,713 | 2,274 | 57 | 56 | |
Dokdonella | ||||||
dko | Dokdonella koreensis | 3,775 | 1,891 | 53 | 52 | |
Luteibacter | ||||||
lrz | Luteibacter rhizovicinus DSM 16549 | 4,247 | 2,201 | 61 | 58 | |
lpy | Luteibacter pinisoli | 4,081 | 2,193 | 61 | 60 | |
lanh | Luteibacter anthropi | 4,176 | 2,013 | 63 | 62 | |
lfl | Luteibacter flocculans | 3,645 | 1,956 | 59 | 57 | |
laeg | Luteibacter aegosomatis | 4,140 | 2,109 | 63 | 61 | |
laeo | Luteibacter aegosomatissinici | 4,367 | 2,133 | 60 | 59 | |
laes | Luteibacter aegosomaticola | 4,468 | 2,176 | 61 | 59 | |
Ahniella | ||||||
xba | Ahniella affigens | 4,708 | 2,022 | 59 | 58 | |
Aerosticca | ||||||
rbd | Aerosticca soli | 2,650 | 1,697 | 55 | 53 | |
Tahibacter | ||||||
tamn | Tahibacter amnicola | 4,992 | 2,074 | 64 | 58 | |
Vibrio | ||||||
vch | Vibrio cholerae O1 El Tor N16961 | Ref | 3,828 | 2,388 | 122 | 122 |
vcf | Vibrio cholerae O1 El Tor FJ147 | 3,511 | 2,422 | 120 | 120 | |
vcs | Vibrio cholerae O1 El Tor MS6 | 3,752 | 2,422 | 110 | 110 | |
vce | Vibrio cholerae O1 2010EL-1786 | 3,845 | 2,460 | 101 | 101 | |
vcq | Vibrio cholerae O1 2012EL-2176 | 3,754 | 2,535 | 128 | 128 | |
vcj | Vibrio cholerae O1 MJ-1236 | 3,774 | 2,470 | 120 | 120 | |
vci | Vibrio cholerae O1 IEC224 | 3,664 | 2,438 | 123 | 123 | |
vco | Vibrio cholerae O1 O395 | 3,875 | 2,436 | 121 | 121 | |
vcr | Vibrio cholerae O1 O395 | 3,934 | 2,420 | 121 | 121 | |
vcm | Vibrio cholerae O1 M66-2 | 3,693 | 2,414 | 119 | 119 | |
vcl | Vibrio cholerae O1 LMA3984-4 | 3,153 | 2,205 | 117 | 117 | |
vcx | Vibrio cholerae O49 1154-74 | 3,418 | 2,353 | 135 | 135 | |
vcz | Vibrio cholerae O27 10432-62 | 3,581 | 2,390 | 116 | 116 | |
vvu | Vibrio vulnificus CMCP6 | Ref | 4,433 | 2,637 | 139 | 139 |
vvy | Vibrio vulnificus YJ016 | 5,028 | 2,750 | 142 | 142 | |
vvm | Vibrio vulnificus MO6-24/O | 4,562 | 2,660 | 139 | 139 | |
vvl | Vibrio vulnificus 93U204 | 4,512 | 2,707 | 131 | 131 | |
vpa | Vibrio parahaemolyticus RIMD 2210633 | Ref | 4,832 | 2,733 | 160 | 160 |
vpb | Vibrio parahaemolyticus BB22OP | 4,447 | 2,657 | 160 | 160 | |
vpk | Vibrio parahaemolyticus O1:K33 CDC_K4557 | 4,579 | 2,758 | 164 | 164 | |
vpf | Vibrio parahaemolyticus O1:Kuk FDA_R31 | 4,731 | 2,749 | 167 | 167 | |
vph | Vibrio parahaemolyticus UCM-V493 | 4,833 | 2,781 | 145 | 145 | |
vha | Vibrio campbellii ATCC BAA-1116 | 6,064 | 3,055 | 159 | 157 | |
vca | Vibrio campbellii ATCC BAA-1116 | 5,428 | 2,968 | 126 | 126 | |
vag | Vibrio alginolyticus | 4,698 | 2,820 | 139 | 139 | |
vex | Vibrio antiquarius | 4,518 | 2,765 | 158 | 158 | |
vdb | Vibrio diabolicus | 4,606 | 2,672 | 171 | 170 | |
vhr | Vibrio harveyi | 5,439 | 3,080 | 175 | 173 | |
vna | Vibrio natriegens | 4,459 | 2,918 | 164 | 164 | |
vow | Vibrio owensii | 5,141 | 3,024 | 175 | 174 | |
vro | Vibrio rotiferianus | 4,620 | 2,742 | 178 | 177 | |
vsp | Vibrio atlanticus | 4,431 | 2,628 | 168 | 152 | |
vej | Vibrio sp. EJY3 | 4,786 | 3,026 | 149 | 149 | |
vfu | Vibrio furnissii | 4,462 | 2,896 | 123 | 123 | |
vni | Vibrio nigripulchritudo | 5,574 | 3,220 | 155 | 139 | |
van | Vibrio anguillarum 775 | 3,731 | 2,388 | 105 | 105 | |
lag | Vibrio anguillarum M3 | 3,678 | 2,380 | 107 | 107 | |
vau | Vibrio anguillarum NB10 | 3,727 | 2,442 | 124 | 122 | |
vcy | Vibrio coralliilyticus RE98 | 5,467 | 3,001 | 153 | 149 | |
vct | Vibrio coralliilyticus OCN014 | 4,909 | 2,883 | 110 | 106 | |
vtu | Vibrio tubiashii | 4,918 | 2,889 | 150 | 149 | |
veu | Vibrio europaeus | 4,913 | 2,954 | 152 | 151 | |
vsi | Vibrio sinaloensis | 3,608 | 2,400 | 147 | 144 | |
vfl | Vibrio fluvialis | 4,362 | 2,845 | 143 | 142 | |
vmi | Vibrio mimicus | 3,959 | 2,557 | 133 | 132 | |
vbr | Vibrio breoganii | 3,997 | 2,433 | 135 | 133 | |
vsc | Vibrio scophthalmi | 4,453 | 2,554 | 154 | 153 | |
vga | Vibrio gazogenes | 4,112 | 2,588 | 120 | 118 | |
vsh | Vibrio mediterranei | 5,128 | 3,181 | 152 | 151 | |
vqi | Vibrio qinghaiensis | 3,433 | 2,289 | 140 | 139 | |
vta | Vibrio tapetis subsp. tapetis | 5,521 | 2,897 | 183 | 107 | |
vaf | Vibrio alfacsensis | 3,890 | 2,341 | 168 | 167 | |
vnl | Vibrio neocaledonicus | 4,758 | 2,813 | 170 | 169 | |
vcc | Vibrio cyclitrophicus | 4,290 | 2,666 | 186 | 185 | |
vas | Vibrio astriarenae | 4,180 | 2,666 | 154 | 152 | |
vaq | Vibrio aquimaris | 4,010 | 2,409 | 147 | 139 | |
vsr | Vibrio spartinae | 4,285 | 2,671 | 167 | 120 | |
vka | Vibrio kanaloae | 3,936 | 2,532 | 180 | 178 | |
vzi | Vibrio ziniensis | 4,121 | 2,704 | 145 | 142 | |
vnv | Vibrio navarrensis | 4,040 | 2,475 | 152 | 145 | |
vgi | Vibrio gigantis | 4,530 | 2,728 | 184 | 183 | |
vsl | Vibrio splendidus | 4,575 | 2,727 | 187 | 186 | |
vpl | Vibrio paracholerae | 3,470 | 2,350 | 117 | 117 | |
vjp | Vibrio japonicus | 3,802 | 2,493 | 159 | 155 | |
vpg | Vibrio pelagius | 3,888 | 2,458 | 182 | 177 | |
vos | Vibrio ostreae | 3,974 | 2,520 | 152 | 151 | |
vti | Vibrio tarriae | 3,607 | 2,327 | 139 | 138 | |
vcra | Vibrio crassostreae | 4,820 | 2,834 | 180 | 179 | |
vnp | Vibrio neptunius | 4,209 | 2,314 | 156 | 153 | |
vle | Vibrio lentus | 4,624 | 2,777 | 139 | 138 | |
vsy | Vibrio syngnathi | 4,166 | 2,530 | 176 | 175 | |
vru | Vibrio ruber | 3,952 | 2,505 | 119 | 24 | |
vmt | Vibrio metoecus | 3,583 | 2,418 | 140 | 25 | |
vib | Vibrio sp. STUT-A11 | 4,630 | 2,940 | 167 | 20 | |
vis | Vibrio sp. STUT-A16 | 4,804 | 2,786 | 166 | 22 | |
vio | Vibrio sp. NTOU-M3 | 4,252 | 2,666 | 137 | 14 | |
vih | Vibrio sp. HB236076 | 3,276 | 2,234 | 150 | ||
vck | Vibrio chaetopteri | 4,782 | 2,826 | 147 | ||
Aliivibrio | ||||||
vfi | Aliivibrio fischeri ES114 | Ref | 3,818 | 2,375 | 165 | 163 |
vfm | Aliivibrio fischeri MJ11 | 4,039 | 2,428 | 136 | 136 | |
vsa | Aliivibrio salmonicida | 3,915 | 2,400 | 165 | 149 | |
awd | Aliivibrio wodanis | 3,975 | 2,447 | 202 | 116 | |
Photobacterium | ||||||
ppr | Photobacterium profundum | 5,480 | 3,137 | 209 | 207 | |
pgb | Photobacterium gaetbulicola | 5,006 | 3,063 | 160 | 160 | |
pds | Photobacterium damselae subsp. damselae | 3,811 | 2,412 | 245 | 240 | |
pgh | Photobacterium ganghwense | 4,919 | 2,957 | 247 | 241 | |
phot | Photobacterium sp. CCB-ST2H9 | 4,605 | 2,557 | 171 | 42 | |
pate | Photobacterium atrarenae | 4,684 | 2,748 | 195 | 11 | |
Grimontia | ||||||
gho | Grimontia hollisae | 3,490 | 2,395 | 141 | 136 | |
gkd | Grimontia kaedaensis | 4,731 | 2,780 | 153 | 145 | |
Paraphotobacterium | ||||||
pmai | Paraphotobacterium marinum | 2,309 | 1,486 | 108 | 107 | |
Salinivibrio | ||||||
saly | Salinivibrio sp. YCSC6 | 3,242 | 2,193 | 130 | 129 | |
sks | Salinivibrio kushneri | 2,986 | 2,104 | 129 | 127 | |
scot | Salinivibrio costicola | 3,172 | 2,179 | 130 | 129 | |
spro | Salinivibrio proteolyticus | 3,292 | 2,146 | 130 | 129 | |
Enterovibrio | ||||||
elux | Candidatus Enterovibrio altilux | 1,986 | 938 | 40 | 4 | |
Metapseudomonas | ||||||
pre | Metapseudomonas resinovorans | 5,875 | 3,350 | 86 | 86 | |
pfuw | Metapseudomonas furukawaii | 5,755 | 3,325 | 87 | 87 | |
poj | Metapseudomonas otitidis | 5,595 | 3,149 | 87 | 77 | |
plal | Metapseudomonas lalkuanensis | 5,395 | 3,176 | 92 | 91 | |
Pseudomonas | ||||||
pae | Pseudomonas aeruginosa PAO1 | Ref | 5,572 | 3,398 | 106 | 80 |
paev | Pseudomonas aeruginosa PAO1-VE13 | 5,670 | 3,416 | 76 | 75 | |
paei | Pseudomonas aeruginosa PAO1-VE2 | 5,669 | 3,416 | 76 | 75 | |
pau | Pseudomonas aeruginosa UCBPP-PA14 | 5,892 | 3,450 | 72 | 72 | |
pag | Pseudomonas aeruginosa LESB58 | 5,931 | 3,414 | 102 | 83 | |
paf | Pseudomonas aeruginosa M18 | 5,684 | 3,405 | 80 | 76 | |
pnc | Pseudomonas aeruginosa NCGM2.S1 | 6,269 | 3,477 | 89 | 78 | |
paeb | Pseudomonas aeruginosa NCGM 1900 | 6,358 | 3,469 | 81 | 80 | |
pdk | Pseudomonas aeruginosa DK2 | 5,884 | 3,399 | 76 | 75 | |
psg | Pseudomonas aeruginosa B136-33 | 5,828 | 3,429 | 76 | 75 | |
prp | Pseudomonas aeruginosa RP73 | 5,762 | 3,351 | 76 | 75 | |
paep | Pseudomonas aeruginosa PA1 | 5,902 | 3,429 | 77 | 77 | |
paer | Pseudomonas aeruginosa PA1R | 5,612 | 3,319 | 77 | 77 | |
paem | Pseudomonas aeruginosa MTB-1 | 6,078 | 3,442 | 77 | 76 | |
pael | Pseudomonas aeruginosa LES431 | 5,964 | 3,412 | 79 | 79 | |
paes | Pseudomonas aeruginosa SCV20265 | 6,299 | 3,483 | 75 | 75 | |
paeu | Pseudomonas aeruginosa PA38182 | 7,279 | 3,523 | 81 | 69 | |
paeg | Pseudomonas aeruginosa YL84 | 5,821 | 3,397 | 77 | 77 | |
paec | Pseudomonas aeruginosa c7447m | 5,648 | 3,412 | 76 | 75 | |
paeo | Pseudomonas aeruginosa PAO581 | 5,498 | 3,328 | 76 | 75 | |
sech | Pseudomonas aeruginosa B18 | 5,918 | 3,429 | 77 | 76 | |
pcq | Pseudomonas citronellolis | 6,071 | 3,491 | 96 | 85 | |
pmui | Pseudomonas multiresinivorans | 5,854 | 3,320 | 89 | 86 | |
pnt | Pseudomonas nitroreducens | 6,939 | 3,512 | 90 | 86 | |
pap | Pseudomonas paraeruginosa PA7 | 6,010 | 3,408 | 75 | 74 | |
ppaa | Pseudomonas paraeruginosa | 5,542 | 3,254 | 79 | 78 | |
ppu | Pseudomonas putida KT2440 | Ref | 5,564 | 3,032 | 165 | 103 |
ppf | Pseudomonas putida F1 | 5,252 | 3,074 | 98 | 98 | |
ppg | Pseudomonas putida GB-1 | 5,409 | 3,166 | 101 | 98 | |
ppw | Pseudomonas putida W619 | 5,182 | 3,034 | 101 | 100 | |
ppt | Pseudomonas putida S16 | 5,218 | 3,105 | 89 | 89 | |
ppb | Pseudomonas putida BIRD-1 | 4,960 | 2,953 | 86 | 86 | |
ppi | Pseudomonas putida ND6 | 6,391 | 3,191 | 93 | 93 | |
ppx | Pseudomonas putida DOT-T1E | 5,721 | 3,146 | 82 | 70 | |
ppuh | Pseudomonas putida HB3267 | 5,386 | 3,055 | 92 | 92 | |
pput | Pseudomonas putida H8234 | 6,357 | 3,337 | 87 | 85 | |
ppun | Pseudomonas putida NBRC 14164 | 5,449 | 3,214 | 95 | 95 | |
ppud | Pseudomonas putida DLL-E4 | 5,861 | 3,322 | 85 | 85 | |
pfv | Pseudomonas fulva | 4,461 | 2,769 | 79 | 78 | |
pmon | Pseudomonas monteilii SB3078 | 5,436 | 3,147 | 87 | 87 | |
pmot | Pseudomonas monteilii SB3101 | 5,360 | 3,127 | 86 | 86 | |
ppj | Pseudomonas plecoglossicida | 5,907 | 3,216 | 92 | 92 | |
por | Pseudomonas oryzihabitans USDA-ARS-USMARC-56511 | 4,282 | 2,723 | 86 | 85 | |
ppsl | Pseudomonas oryzihabitans PRS08-11306 | 4,782 | 2,882 | 96 | 85 | |
pmol | Pseudomonas mosselii | 5,034 | 2,966 | 106 | 104 | |
pald | Pseudomonas alloputida | 5,723 | 3,122 | 102 | 101 | |
pix | Pseudomonas inefficax | 5,177 | 3,021 | 101 | 100 | |
pmos | Pseudomonas soli | 5,413 | 3,136 | 100 | 100 | |
pst | Pseudomonas syringae pv. tomato DC3000 | Ref | 5,621 | 3,021 | 107 | 83 |
psb | Pseudomonas syringae pv. syringae B728a | Ref | 5,089 | 2,916 | 83 | 83 |
psyr | Pseudomonas syringae CC1557 | 5,068 | 2,897 | 79 | 79 | |
psp | Pseudomonas savastanoi pv. phaseolicola 1448A | 5,172 | 2,997 | 80 | 80 | |
psav | Pseudomonas savastanoi pv. savastanoi | 5,138 | 2,983 | 80 | 79 | |
pamg | Pseudomonas amygdali | 5,642 | 3,002 | 87 | 84 | |
pci | Pseudomonas cichorii | 5,174 | 2,964 | 84 | 84 | |
pavl | Pseudomonas avellanae | 5,777 | 3,069 | 84 | 82 | |
pvd | Pseudomonas viridiflava | 5,384 | 3,094 | 79 | 79 | |
pcab | Pseudomonas cannabina pv. alisalensis | 5,181 | 2,967 | 85 | 84 | |
pcof | Pseudomonas coronafaciens pv. oryzae | 4,976 | 2,780 | 83 | 82 | |
ptre | Pseudomonas tremae | 5,099 | 2,863 | 83 | 82 | |
psyi | Pseudomonas syringae pv. tagetis | 5,258 | 2,961 | 83 | 82 | |
past | Pseudomonas asturiensis | 5,107 | 2,911 | 86 | 83 | |
plij | Pseudomonas lijiangensis | 4,895 | 2,916 | 88 | 87 | |
pfuv | Pseudomonas fuscovaginae | 5,506 | 3,178 | 92 | 5 | |
pfl | Pseudomonas protegens Pf-5 | 6,108 | 3,467 | 104 | 91 | |
pprc | Pseudomonas protegens CHA0 | 6,115 | 3,447 | 83 | 83 | |
ppro | Pseudomonas protegens Cab57 | 6,186 | 3,479 | 84 | 84 | |
pfe | Pseudomonas ogarae F113 | 5,862 | 3,523 | 91 | 85 | |
pza | Pseudomonas ogarae SWRI108 | 5,685 | 3,376 | 86 | 85 | |
pfn | Pseudomonas fluorescens UK4 | 5,178 | 3,114 | 88 | 88 | |
pfo | Pseudomonas fluorescens Pf0-1 | 5,722 | 3,287 | 94 | 93 | |
pfs | Pseudomonas fluorescens SBW25 | 5,921 | 3,446 | 98 | 88 | |
pfc | Pseudomonas fluorescens A506 | 5,334 | 3,113 | 105 | 94 | |
ppz | Pseudomonas poae | 4,796 | 2,877 | 81 | 81 | |
pfb | Pseudomonas synxantha LBUM223 | 5,909 | 3,354 | 87 | 87 | |
pman | Pseudomonas mandelii | 6,644 | 3,462 | 84 | 83 | |
ptv | Pseudomonas trivialis | 5,713 | 3,333 | 84 | 83 | |
pcg | Pseudomonas corrugata | 5,189 | 3,087 | 85 | 84 | |
pvr | Pseudomonas veronii | 6,086 | 3,533 | 89 | 88 | |
pazo | Pseudomonas azotoformans | 5,991 | 3,510 | 94 | 93 | |
poi | Pseudomonas orientalis | 5,142 | 3,022 | 90 | 89 | |
prx | Pseudomonas rhodesiae | 5,124 | 3,096 | 87 | 85 | |
pmed | Pseudomonas mediterranea | 5,312 | 3,012 | 86 | 84 | |
pkr | Pseudomonas koreensis | 5,515 | 3,076 | 89 | 87 | |
pmud | Pseudomonas mucidolens | 5,284 | 3,094 | 87 | 83 | |
ptol | Pseudomonas tolaasii | 5,656 | 3,319 | 86 | 85 | |
pmab | Pseudomonas marginalis | 5,983 | 3,441 | 86 | 85 | |
pbre | Pseudomonas brenneri | 5,613 | 3,218 | 93 | 8 | |
pfw | Pseudomonas simiae PCL1751 | 5,534 | 3,294 | 89 | 88 | |
pff | Pseudomonas simiae PICF7 | 5,567 | 3,326 | 88 | 87 | |
pfx | Pseudomonas lurida | 5,539 | 3,267 | 74 | 72 | |
pen | Pseudomonas entomophila | 5,134 | 2,966 | 107 | 105 | |
plul | Pseudomonas luteola | 5,343 | 3,086 | 93 | 92 | |
pba | Pseudomonas brassicacearum subsp. brassicacearum NFM421 | 6,095 | 3,481 | 81 | 81 | |
pbc | Pseudomonas brassicacearum DF41 | 5,574 | 3,270 | 82 | 82 | |
ppuu | Pseudomonas sp. UW4 | 5,423 | 3,204 | 94 | 94 | |
pdr | Pseudomonas sp. ATCC 13867 | 5,056 | 3,006 | 79 | 79 | |
psv | Pseudomonas sp. VLB120 | 5,479 | 2,995 | 101 | 101 | |
psk | Pseudomonas gorinensis | 6,297 | 3,650 | 84 | 84 | |
pkc | Pseudomonas knackmussii | 5,750 | 3,267 | 73 | 73 | |
pch | Pseudomonas chlororaphis PA23 | 6,179 | 3,551 | 85 | 84 | |
pcz | Pseudomonas chlororaphis PCL1606 | 6,093 | 3,395 | 87 | 87 | |
pcp | Pseudomonas chlororaphis subsp. aurantiaca | 5,780 | 3,397 | 84 | 84 | |
pchp | Pseudomonas chlororaphis subsp. piscium | 6,241 | 3,434 | 83 | 83 | |
pfz | Pseudomonas fragi | 4,324 | 2,740 | 88 | 88 | |
plq | Pseudomonas lundensis | 3,982 | 2,473 | 100 | 99 | |
palk | Pseudomonas alkylphenolica | 5,177 | 3,030 | 112 | 90 | |
prh | Pseudomonas rhizosphaerae | 3,893 | 2,541 | 89 | 89 | |
psw | Pseudomonas cremoricolorata | 4,031 | 2,474 | 93 | 93 | |
ppv | Pseudomonas parafulva | 4,212 | 2,697 | 98 | 98 | |
pses | Pseudomonas sp. StFLB209 | 5,598 | 3,268 | 87 | 87 | |
psem | Pseudomonas sp. MRSN12121 | 6,178 | 3,456 | 87 | 83 | |
psec | Pseudomonas sp. CCOS 191 | 5,302 | 3,068 | 100 | 100 | |
ppsy | Pseudomonas versuta | 4,425 | 2,857 | 94 | 94 | |
psos | Pseudomonas sp. Os17 | 6,195 | 3,450 | 89 | 89 | |
pfk | Pseudomonas frederiksbergensis | 5,565 | 3,229 | 92 | 89 | |
panr | Pseudomonas antarctica | 5,890 | 3,331 | 87 | 86 | |
pset | Pseudomonas sp. TCU-HL1 | 5,769 | 3,321 | 86 | 86 | |
psil | Pseudomonas silesiensis | 5,875 | 3,427 | 96 | 94 | |
pym | Pseudomonas yamanorum | 6,148 | 3,550 | 83 | 82 | |
pade | Candidatus Pseudomonas adelgestsugas | 944 | 710 | 42 | 42 | |
pke | Pseudomonas kribbensis | 5,626 | 3,252 | 97 | 95 | |
pum | Pseudomonas umsongensis | 5,900 | 3,426 | 96 | 93 | |
pgg | Pseudomonas graminis | 4,825 | 2,906 | 83 | 81 | |
ppsh | Pseudomonas psychrophila | 4,647 | 2,972 | 100 | 98 | |
pgy | Pseudomonas glycinae | 5,674 | 3,239 | 88 | 86 | |
psej | Pseudomonas sediminis | 4,508 | 2,825 | 83 | 82 | |
pvk | Pseudomonas viciae | 5,778 | 3,395 | 85 | 83 | |
pez | Pseudomonas eucalypticola | 5,596 | 3,327 | 112 | 110 | |
pbz | Pseudomonas bijieensis | 5,661 | 3,336 | 86 | 84 | |
pmao | Pseudomonas marincola | 4,502 | 2,619 | 126 | 84 | |
pata | Pseudomonas atacamensis | 5,316 | 2,992 | 85 | 82 | |
pdw | Pseudomonas donghuensis | 5,108 | 2,997 | 100 | 99 | |
pze | Pseudomonas zeae | 5,709 | 3,203 | 96 | 95 | |
pmoe | Pseudomonas monsensis | 5,538 | 3,140 | 95 | 92 | |
psep | Pseudomonas sessilinigenes | 6,284 | 3,399 | 86 | 85 | |
ppii | Pseudomonas piscis | 6,148 | 3,342 | 91 | 90 | |
pvw | Pseudomonas vanderleydeniana | 6,176 | 3,545 | 93 | 92 | |
ptrt | Pseudomonas tritici | 5,596 | 3,255 | 86 | 85 | |
pxa | Pseudomonas xanthosomatis | 5,117 | 2,968 | 98 | 97 | |
psam | Pseudomonas salmasensis | 5,465 | 3,168 | 91 | 90 | |
ptz | Pseudomonas tensinigenes | 5,788 | 3,228 | 93 | 92 | |
pqi | Pseudomonas qingdaonensis | 5,287 | 3,010 | 94 | 92 | |
pshh | Pseudomonas shahriarae | 5,318 | 3,171 | 87 | 86 | |
pxn | Pseudomonas xantholysinigenes | 4,840 | 2,863 | 98 | 97 | |
phv | Pseudomonas hamedanensis | 5,206 | 3,027 | 88 | 87 | |
pprg | Pseudomonas promysalinigenes | 4,421 | 2,740 | 100 | 99 | |
panh | Pseudomonas anuradhapurensis | 4,779 | 2,862 | 102 | 101 | |
pasg | Pseudomonas asgharzadehiana | 5,430 | 3,219 | 91 | 90 | |
pfak | Pseudomonas fakonensis | 5,287 | 3,011 | 99 | 97 | |
pmuy | Pseudomonas muyukensis | 4,770 | 2,850 | 99 | 97 | |
pmam | Pseudomonas maumuensis | 4,970 | 2,943 | 104 | 103 | |
paze | Pseudomonas azerbaijanorientalis | 5,443 | 3,147 | 96 | 95 | |
palv | Pseudomonas alvandae SWRI17 | 5,534 | 3,237 | 86 | 84 | |
pcas | Pseudomonas alvandae B21-020 | 5,688 | 3,258 | 85 | 84 | |
pory | Pseudomonas oryziphila | 5,353 | 2,995 | 102 | 101 | |
pwz | Pseudomonas wenzhouensis | 3,955 | 2,480 | 81 | 80 | |
ptk | Pseudomonas tructae | 5,033 | 2,975 | 100 | 99 | |
ptw | Pseudomonas tohonis | 6,175 | 3,247 | 79 | 76 | |
pie | Pseudomonas iranensis | 5,358 | 3,032 | 89 | ||
pwy | Pseudomonas wayambapalatensis | 4,578 | 2,742 | 85 | 84 | |
ptae | Pseudomonas taetrolens | 4,352 | 2,738 | 89 | 87 | |
pgf | Pseudomonas germanica | 5,843 | 3,257 | 96 | 95 | |
pcav | Pseudomonas cavernae | 4,308 | 2,591 | 85 | 82 | |
pju | Pseudomonas juntendi | 4,994 | 2,826 | 100 | 99 | |
pphn | Pseudomonas phenolilytica | 3,646 | 2,359 | 76 | 75 | |
piz | Pseudomonas izuensis | 5,946 | 3,384 | 96 | 93 | |
ppeg | Pseudomonas pergaminensis | 5,876 | 3,433 | 86 | 85 | |
psii | Pseudomonas siliginis | 5,377 | 2,994 | 88 | 87 | |
psih | Pseudomonas sichuanensis | 5,186 | 2,978 | 102 | 101 | |
pfit | Pseudomonas fitomaticsae | 5,742 | 3,225 | 95 | 93 | |
pasi | Pseudomonas asiatica | 5,537 | 3,134 | 98 | 97 | |
pkm | Pseudomonas kermanshahensis | 5,419 | 3,180 | 99 | 98 | |
pnb | Pseudomonas nunensis | 6,305 | 3,441 | 91 | 90 | |
psoa | Pseudomonas solani | 6,102 | 3,190 | 82 | 76 | |
ptai | Pseudomonas taiwanensis | 5,063 | 3,009 | 102 | 101 | |
pkk | Pseudomonas kurunegalensis | 5,451 | 3,163 | 97 | 96 | |
pkj | Pseudomonas kielensis | 5,171 | 2,981 | 100 | 98 | |
phyg | Pseudomonas hygromyciniae | 5,304 | 3,010 | 93 | 90 | |
phom | Pseudomonas hormoni | 5,806 | 3,256 | 91 | 90 | |
pcuc | Pseudomonas cucumis | 5,508 | 3,189 | 94 | 92 | |
ptrl | Pseudomonas triclosanedens | 5,633 | 3,129 | 79 | 77 | |
ppae | Pseudomonas palleroniana | 5,578 | 3,255 | 93 | 92 | |
ppao | Pseudomonas phytophila | 5,710 | 3,088 | 83 | 82 | |
prhz | Pseudomonas rhizophila | 5,215 | 3,098 | 70 | 68 | |
psjy | Pseudomonas sp. JY-Q | 5,334 | 3,032 | 105 | 104 | |
psku | Pseudomonas sp. KUIN-1 | 5,208 | 2,911 | 79 | 79 | |
pshs | Pseudomonas sp. HS6 | 5,778 | 3,246 | 70 | 69 | |
phef | Pseudomonas hefeiensis | 5,511 | 3,190 | 87 | 85 | |
pslp | Pseudomonas sp. LPH1 | 4,577 | 2,849 | 81 | 80 | |
plis | Pseudomonas serboccidentalis | 5,330 | 3,062 | 68 | 66 | |
plau | Pseudomonas lalucatii | 2,529 | 1,430 | 85 | 84 | |
psnc | Pseudomonas sp. NC02 | 6,255 | 3,566 | 86 | 85 | |
pfou | Pseudomonas fortuita | 5,572 | 3,177 | 102 | 100 | |
pbej | Pseudomonas beijingensis | 5,274 | 3,003 | 89 | 84 | |
pkv | Pseudomonas khavaziana | 5,497 | 3,198 | 91 | 8 | |
psmt | Pseudomonas sp. MT-1 | 4,477 | 2,660 | 65 | 7 | |
pskp | Pseudomonas sp. KU43P | 5,294 | 3,041 | 100 | 6 | |
pbam | Pseudomonas batumici | 5,969 | 3,170 | 94 | 7 | |
pdeu | Pseudomonas defluvii | 4,632 | 2,791 | 96 | 8 | |
pqe | Pseudomonas quebecensis | 5,060 | 2,988 | 86 | 3 | |
pben | Pseudomonas benzopyrenica | 4,656 | 2,767 | 89 | 11 | |
psdt | Pseudomonas sp. Stari2 | 5,667 | 3,244 | 90 | 4 | |
pbez | Pseudomonas benzenivorans | 4,045 | 2,474 | 85 | 7 | |
pcaa | Pseudomonas canadensis | 6,128 | 3,473 | 91 | 5 | |
pbub | Pseudomonas bubulae | 4,638 | 2,873 | 101 | 5 | |
psml | Pseudomonas sp. ML2-2023-3 | 4,789 | 3,023 | 96 | 1 | |
psmz | Pseudomonas sp. ML2-2023-6 | 4,741 | 2,856 | 98 | 1 | |
psiv | Pseudomonas silvicola | 7,372 | 3,734 | 120 | ||
Ectopseudomonas | ||||||
pmy | Ectopseudomonas mendocina ymp | 4,594 | 2,861 | 82 | 80 | |
pmk | Ectopseudomonas mendocina NK-01 | 4,958 | 2,959 | 77 | 77 | |
ppse | Ectopseudomonas oleovorans | 4,431 | 2,604 | 79 | 79 | |
pall | Ectopseudomonas alcaliphila | 4,773 | 2,908 | 81 | 80 | |
pkh | Ectopseudomonas khazarica | 4,914 | 3,019 | 84 | 82 | |
pty | Ectopseudomonas toyotomiensis | 4,746 | 2,950 | 81 | 80 | |
phf | Ectopseudomonas hydrolytica | 5,050 | 2,885 | 82 | 80 | |
pche | Ectopseudomonas chengduensis | 4,714 | 2,869 | 81 | 80 | |
Stutzerimonas | ||||||
psa | Stutzerimonas stutzeri A1501 | 4,128 | 2,608 | 69 | 67 | |
psz | Stutzerimonas stutzeri ATCC 17588 = LMG 11199 | 4,217 | 2,571 | 70 | 70 | |
psr | Stutzerimonas stutzeri DSM 4166 | 4,302 | 2,738 | 71 | 71 | |
psc | Stutzerimonas stutzeri CCUG 29243 | 4,300 | 2,660 | 74 | 73 | |
psj | Stutzerimonas stutzeri DSM 10701 | 3,815 | 2,492 | 73 | 73 | |
psh | Stutzerimonas stutzeri RCH2 | 4,265 | 2,647 | 83 | 75 | |
pstt | Stutzerimonas stutzeri 28a24 | 4,147 | 2,654 | 72 | 72 | |
pstu | Stutzerimonas decontaminans | 4,371 | 2,688 | 73 | 73 | |
psed | Stutzerimonas frequens | 4,074 | 2,599 | 77 | 76 | |
pchl | Stutzerimonas chloritidismutans | 4,097 | 2,627 | 76 | 75 | |
pbm | Stutzerimonas balearica | 3,923 | 2,491 | 73 | 73 | |
pkg | Stutzerimonas kunmingensis | 4,390 | 2,643 | 76 | 75 | |
sdeg | Stutzerimonas degradans | 3,632 | 2,363 | 75 | 74 | |
pzd | Stutzerimonas zhaodongensis | 4,410 | 2,696 | 76 | 75 | |
Azotobacter | ||||||
avn | Azotobacter vinelandii DJ | Ref | 5,051 | 2,778 | 108 | 89 |
avl | Azotobacter vinelandii CA | 5,048 | 2,808 | 100 | 89 | |
avd | Azotobacter vinelandii CA6 | 5,006 | 2,779 | 100 | 89 | |
acx | Azotobacter chroococcum | 4,447 | 2,623 | 112 | 88 | |
Thiopseudomonas | ||||||
pbb | Thiopseudomonas alkaliphila | 2,257 | 1,597 | 70 | 70 | |
Permianibacter | ||||||
pagr | Permianibacter aggregans | 3,724 | 2,027 | 60 | 56 | |
Entomomonas | ||||||
emo | Entomomonas moraniae | 3,025 | 1,844 | 64 | 62 | |
eaz | Entomomonas asaccharolytica | 2,961 | 1,658 | 61 | 60 | |
ento | Entomomonas sp. E2T0 | 3,054 | 1,727 | 63 | 22 | |
Halopseudomonas | ||||||
hpeg | Halopseudomonas pelagia | 4,065 | 2,414 | 66 | 63 | |
haes | Halopseudomonas aestusnigri | 3,585 | 2,150 | 75 | 73 | |
pden | Pseudomonas denitrificans (nom. rej.) | 5,953 | 3,221 | 82 | 79 | |
harr | Halopseudomonas maritima | 3,532 | 2,063 | 68 | 67 | |
pnn | Halopseudomonas nanhaiensis | 3,292 | 2,065 | 64 | 63 | |
ppha | Halopseudomonas phragmitis | 3,648 | 2,259 | 64 | 63 | |
hasm | Halopseudomonas sp. SMJS2 | 3,436 | 1,150 | 72 | 21 | |
Denitrificimonas | ||||||
dce | Denitrificimonas caeni | 2,538 | 1,693 | 67 | 66 | |
Aquipseudomonas | ||||||
palc | Aquipseudomonas alcaligenes | 3,977 | 2,394 | 73 | 71 | |
pcam | Aquipseudomonas campi | 3,980 | 2,287 | 71 | 70 | |
unclassified Pseudomonadaceae | ||||||
pbau | Pseudomonadaceae bacterium T75 | 4,167 | 2,529 | 77 | 75 | |
Marinobacter | ||||||
maq | Marinobacter nauticus VT8 | 4,272 | 2,449 | 63 | 63 | |
mhc | Marinobacter nauticus ATCC 49840 | 3,804 | 2,239 | 59 | 59 | |
mad | Marinobacter adhaerens | 4,410 | 2,454 | 60 | 60 | |
mbs | Marinobacter sp. BSs20148 | 3,887 | 2,324 | 57 | 57 | |
msr | Marinobacter salarius | 3,168 | 1,652 | 48 | 48 | |
msx | Marinobacter similis | 2,692 | 1,433 | 50 | 50 | |
mpq | Marinobacter psychrophilus | 3,450 | 2,292 | 59 | 59 | |
mari | Marinobacter sp. CP1 | 4,173 | 2,467 | 60 | 60 | |
mlq | Marinobacter sp. LQ44 | 3,905 | 2,343 | 63 | 62 | |
msq | Marinobacter salinus | 3,700 | 2,314 | 64 | 63 | |
mara | Marinobacter sp. Arc7-DN-1 | 3,811 | 2,378 | 63 | 62 | |
marj | Marinobacter sp. JH2 | 3,347 | 2,156 | 66 | 64 | |
mall | Marinobacter alkaliphilus | 3,880 | 2,264 | 63 | 62 | |
mshe | Marinobacter shengliensis | 4,089 | 2,362 | 63 | 60 | |
manp | Marinobacter sp. NP-4(2019) | 4,058 | 2,376 | 63 | 62 | |
msan | Marinobacter salinisoli | 3,329 | 2,019 | 63 | 32 | |
mnk | Marinobacter nanhaiticus | 4,937 | 2,647 | 62 | 11 | |
mmee | Marinobacter metalliresistant | 3,958 | 2,366 | 63 | 5 | |
mamm | Marinobacter sp. MMG032 | 3,884 | 2,403 | 63 | 4 | |
mrx | Marinobacter sp. RI1 | 3,466 | 2,159 | 61 | 3 | |
maca | Marinobacter sp. CA1 | 4,212 | 2,337 | 73 | 1 | |
mfli | Marinobacter flavimaris | 4,205 | 2,459 | 65 | ||
Ketobacter | ||||||
kak | Ketobacter alkanivorans | 4,131 | 2,165 | 57 | 56 | |
Pseudohongiella | ||||||
pspi | Pseudohongiella spirulinae | 2,988 | 1,786 | 48 | 47 | |
Psychrobacter | ||||||
par | Psychrobacter arcticus | 2,120 | 1,403 | 64 | 64 | |
pcr | Psychrobacter cryohalolentis | 2,511 | 1,670 | 63 | 63 | |
prw | Psychrobacter sp. PRwf-1 | 2,385 | 1,619 | 75 | 75 | |
pso | Psychrobacter sp. G | 2,614 | 1,679 | 60 | 60 | |
pur | Psychrobacter urativorans | 2,359 | 1,467 | 71 | 71 | |
pali | Psychrobacter alimentarius | 2,677 | 1,705 | 67 | 67 | |
pspg | Psychrobacter sp. P2G3 | 2,623 | 1,713 | 61 | 61 | |
psyg | Psychrobacter sp. P11G5 | 2,755 | 1,752 | 61 | 61 | |
psyc | Psychrobacter sp. DAB_AL43B | 2,769 | 1,675 | 60 | 60 | |
psya | Psychrobacter sp. AntiMn-1 | 2,844 | 1,627 | 65 | 65 | |
psyy | Psychrobacter sp. YP14 | 2,278 | 1,550 | 66 | 65 | |
psyp | Psychrobacter sp. PAMC27889 | 2,663 | 1,706 | 59 | 58 | |
pky | Psychrobacter sp. KH172YL61 | 4,129 | 1,348 | 66 | 66 | |
pcia | Psychrobacter cibarius | 2,842 | 1,667 | 76 | 74 | |
prae | Psychrobacter raelei | 2,536 | 1,573 | 76 | 8 | |
Acinetobacter | ||||||
acb | Acinetobacter baumannii ATCC 17978 | Ref | 3,803 | 1,972 | 84 | 84 |
abm | Acinetobacter baumannii SDF | 2,975 | 1,527 | 87 | 80 | |
aby | Acinetobacter baumannii AYE | 3,712 | 2,037 | 101 | 93 | |
abc | Acinetobacter baumannii ACICU | 3,759 | 2,039 | 82 | 82 | |
abn | Acinetobacter baumannii AB0057 | 3,787 | 2,042 | 93 | 92 | |
abb | Acinetobacter baumannii AB307-0294 | 3,427 | 1,965 | 74 | 74 | |
abx | Acinetobacter baumannii 1656-2 | 3,824 | 2,005 | 89 | 89 | |
abz | Acinetobacter baumannii MDR-ZJ06 | 3,753 | 2,009 | 96 | 94 | |
abr | Acinetobacter baumannii MDR-TJ | 3,936 | 2,064 | 96 | 95 | |
abd | Acinetobacter baumannii TCDC-AB0715 | 3,956 | 2,051 | 54 | 54 | |
abh | Acinetobacter baumannii TYTH-1 | 3,683 | 2,011 | 88 | 88 | |
abad | Acinetobacter baumannii D1279779 | 3,396 | 1,915 | 83 | 83 | |
abj | Acinetobacter baumannii BJAB07104 | 3,861 | 2,018 | 92 | 52 | |
abab | Acinetobacter baumannii BJAB0715 | 3,908 | 2,024 | 91 | 91 | |
abaj | Acinetobacter baumannii BJAB0868 | 3,819 | 2,032 | 93 | 93 | |
abaz | Acinetobacter baumannii ZW85-1 | 3,635 | 2,027 | 87 | 86 | |
abk | Acinetobacter baumannii AbH12O-A2 | 3,527 | 1,994 | 91 | 91 | |
abau | Acinetobacter baumannii AB030 | 4,132 | 2,035 | 92 | 92 | |
abaa | Acinetobacter baumannii AB031 | 3,456 | 1,933 | 92 | 92 | |
abw | Acinetobacter baumannii AC29 | 3,662 | 2,002 | 67 | 67 | |
abal | Acinetobacter baumannii LAC-4 | 3,806 | 2,020 | 91 | 91 | |
acc | Acinetobacter pittii | 3,599 | 2,080 | 75 | 75 | |
ano | Acinetobacter nosocomialis | 3,672 | 2,093 | 91 | 91 | |
alc | Acinetobacter lactucae | 3,586 | 2,044 | 95 | 94 | |
acal | Acinetobacter calcoaceticus | 3,798 | 2,099 | 87 | 86 | |
asei | Acinetobacter seifertii | 3,641 | 2,089 | 95 | 94 | |
acd | Acinetobacter oleivorans | 3,874 | 2,117 | 89 | 89 | |
aci | Acinetobacter baylyi | Ref | 3,277 | 1,881 | 107 | 100 |
att | Acinetobacter sp. TTH0-4 | 2,680 | 1,604 | 102 | 102 | |
aei | Acinetobacter equi | 2,707 | 1,667 | 109 | 109 | |
ajo | Acinetobacter johnsonii | 3,642 | 1,934 | 105 | 105 | |
acw | Acinetobacter sp. DUT-2 | 3,374 | 1,918 | 96 | 95 | |
acv | Acinetobacter sp. TGL-Y2 | 3,349 | 1,698 | 104 | 103 | |
ahl | Acinetobacter haemolyticus | 3,178 | 1,758 | 97 | 96 | |
ajn | Acinetobacter junii | 3,003 | 1,724 | 96 | 95 | |
asol | Acinetobacter soli | 3,309 | 1,903 | 100 | 99 | |
ala | Acinetobacter larvae | 3,148 | 1,831 | 102 | 101 | |
asj | Acinetobacter schindleri | 3,021 | 1,740 | 105 | 105 | |
aid | Acinetobacter indicus | 2,791 | 1,654 | 105 | 104 | |
adv | Acinetobacter defluvii | 3,466 | 1,782 | 103 | 101 | |
arj | Acinetobacter radioresistens | 2,756 | 1,653 | 101 | 100 | |
awu | Acinetobacter wuhouensis | 3,620 | 1,898 | 106 | 103 | |
acum | Acinetobacter cumulans | 3,300 | 1,835 | 122 | 120 | |
agu | Acinetobacter guillouiae | 4,367 | 2,174 | 102 | 102 | |
aug | Acinetobacter ursingii | 3,381 | 1,897 | 94 | 94 | |
alw | Acinetobacter lwoffii | 3,115 | 1,757 | 111 | 110 | |
ads | Acinetobacter dispersus | 3,601 | 1,982 | 97 | 95 | |
aber | Acinetobacter bereziniae | 4,051 | 2,101 | 107 | 105 | |
atn | Acinetobacter tandoii | 3,199 | 1,904 | 104 | 103 | |
achi | Acinetobacter chinensis | 3,432 | 1,816 | 108 | 107 | |
alj | Acinetobacter lanii | 2,930 | 1,712 | 111 | 110 | |
awg | Acinetobacter wanghuae | 2,478 | 1,474 | 109 | 108 | |
asha | Acinetobacter shaoyimingii | 3,118 | 1,779 | 104 | 103 | |
atg | Acinetobacter towneri | 2,531 | 1,536 | 103 | 102 | |
avb | Acinetobacter variabilis | 3,025 | 1,675 | 107 | 107 | |
abou | Acinetobacter bouvetii | 3,102 | 1,753 | 109 | 109 | |
agyl | Acinetobacter gyllenbergii | 3,671 | 1,995 | 97 | 94 | |
aciu | Acinetobacter sp. NCu2D-2 | 2,737 | 1,619 | 111 | 110 | |
avz | Acinetobacter venetianus | 3,555 | 1,842 | 97 | 94 | |
apot | Acinetobacter portensis | 2,786 | 1,572 | 103 | 102 | |
atz | Acinetobacter tibetensis | 3,102 | 1,758 | 106 | 105 | |
aprl | Acinetobacter proteolyticus | 3,626 | 1,560 | 98 | 94 | |
acoi | Acinetobacter colistiniresistens | 3,491 | 1,856 | 99 | 94 | |
aviv | Acinetobacter vivianii | 3,563 | 1,952 | 96 | 95 | |
acie | Acinetobacter sp. BHS4 | 3,603 | 2,013 | 95 | ||
asue | Acinetobacter suaedae | 3,015 | 1,762 | 95 | 1 | |
acig | Acinetobacter sp. LoGeW2-3 | 3,053 | 1,767 | 118 | 7 | |
acot | Acinetobacter corruptisaponis | 3,752 | 1,798 | 96 | 2 | |
atv | Acinetobacter thermotolerans | 3,142 | 1,815 | 116 | 3 | |
Moraxella | ||||||
mct | Moraxella catarrhalis BBH18 | 1,886 | 1,160 | 62 | 62 | |
mcs | Moraxella catarrhalis 25240 | 1,711 | 1,170 | 62 | 62 | |
mcat | Moraxella catarrhalis 25239 | 1,665 | 1,160 | 63 | 63 | |
moi | Moraxella ovis | 1,932 | 1,256 | 62 | 62 | |
mos | Moraxella osloensis | 2,254 | 1,478 | 63 | 62 | |
mbl | Moraxella bovoculi | 1,848 | 1,245 | 62 | 62 | |
mboi | Moraxella bovis | 2,764 | 1,415 | 65 | 63 | |
mcun | Moraxella cuniculi | 1,950 | 1,240 | 63 | 63 | |
mnn | Moraxella nonliquefaciens | 2,122 | 1,272 | 64 | 63 | |
mns | Moraxella nasovis | 1,862 | 1,009 | 67 | 66 | |
mnc | Moraxella nasicaprae | 1,898 | 1,169 | 66 | 65 | |
mnj | Moraxella nasibovis | 2,041 | 1,255 | 65 | 64 | |
mhac | Moraxella haemolytica | 1,882 | 1,196 | 65 | 13 | |
mcah | Moraxella canis | 1,898 | 1,316 | 66 | 9 | |
mow | Moraxella sp. DOX410 | 2,252 | 1,475 | 63 | 3 | |
mora | Moraxella sp. FZFQ2102 | 2,068 | 1,378 | 66 | ||
mork | Moraxella sp. K02 | 2,444 | 1,467 | 61 | ||
morx | Moraxella sp. K23 | 2,372 | 1,497 | 60 | ||
Aquirhabdus | ||||||
mbah | Aquirhabdus parva | 3,347 | 1,775 | 69 | 68 | |
Shewanella | ||||||
son | Shewanella oneidensis | Ref | 4,196 | 2,384 | 143 | 136 |
sdn | Shewanella denitrificans | 3,754 | 2,168 | 127 | 120 | |
sfr | Shewanella frigidimarina | 4,029 | 2,442 | 133 | 127 | |
saz | Shewanella amazonensis | 3,645 | 2,295 | 130 | 129 | |
sbl | Shewanella baltica OS155 | 4,489 | 2,657 | 141 | 139 | |
sbm | Shewanella baltica OS185 | 4,394 | 2,526 | 140 | 140 | |
sbn | Shewanella baltica OS195 | 4,688 | 2,639 | 143 | 140 | |
sbp | Shewanella baltica OS223 | 4,443 | 2,555 | 143 | 140 | |
sbt | Shewanella baltica OS678 | 4,536 | 2,573 | 137 | 136 | |
sbs | Shewanella baltica OS117 | 4,668 | 2,607 | 130 | 127 | |
sbb | Shewanella baltica BA175 | 4,344 | 2,559 | 141 | 140 | |
slo | Shewanella loihica | 3,859 | 2,339 | 124 | 122 | |
spc | Shewanella putrefaciens CN-32 | 3,972 | 2,453 | 129 | 129 | |
shp | Shewanella putrefaciens 200 | 4,179 | 2,440 | 132 | 129 | |
sse | Shewanella sediminis | 4,497 | 2,642 | 165 | 165 | |
spl | Shewanella pealeana | 4,241 | 2,566 | 180 | 180 | |
she | Shewanella sp. MR-4 | 3,924 | 2,416 | 141 | 131 | |
shm | Shewanella sp. MR-7 | 4,014 | 2,402 | 144 | 133 | |
shn | Shewanella sp. ANA-3 | 4,360 | 2,532 | 134 | 133 | |
shw | Shewanella sp. W3-18-1 | 4,044 | 2,440 | 129 | 128 | |
shl | Shewanella halifaxensis | 4,278 | 2,584 | 158 | 158 | |
swd | Shewanella woodyi | 4,880 | 2,676 | 165 | 161 | |
swp | Shewanella piezotolerans | 4,933 | 2,532 | 114 | 27 | |
svo | Shewanella violacea | 4,346 | 2,365 | 169 | 169 | |
shf | Shewanella sp. FDAARGOS_354 | 4,233 | 2,480 | 135 | 134 | |
sja | Shewanella japonica | 4,079 | 2,352 | 125 | 124 | |
spsw | Shewanella psychrophila | 5,503 | 2,890 | 124 | 123 | |
sbj | Shewanella bicestrii | 4,244 | 2,510 | 134 | 132 | |
smav | Shewanella marisflavi | 3,661 | 2,267 | 127 | 123 | |
shew | Shewanella sp. WE21 | 4,416 | 2,445 | 141 | 138 | |
salg | Shewanella algae | 3,944 | 2,324 | 141 | 135 | |
slj | Shewanella livingstonensis | 3,979 | 2,370 | 124 | 123 | |
smai | Shewanella maritima | 3,742 | 2,173 | 130 | 129 | |
spol | Shewanella polaris | 3,847 | 2,353 | 123 | 122 | |
sbk | Shewanella benthica | 4,457 | 2,153 | 302 | 137 | |
skh | Shewanella khirikhana | 4,176 | 2,460 | 127 | 126 | |
saes | Shewanella aestuarii | 3,618 | 2,182 | 122 | 121 | |
slit | Shewanella litorisediminis | 3,626 | 2,266 | 131 | 128 | |
sdk | Shewanella dokdonensis | 3,097 | 1,665 | 117 | 116 | |
scaa | Shewanella carassii | 3,917 | 2,345 | 127 | 125 | |
spsh | Shewanella psychropiezotolerans | 5,004 | 2,658 | 156 | 155 | |
seur | Shewanella eurypsychrophilus | 4,826 | 2,708 | 168 | 163 | |
syk | Shewanella yunxiaonensis | 3,345 | 2,155 | 122 | 119 | |
scyp | Shewanella cyperi | 3,534 | 2,134 | 130 | 129 | |
savi | Shewanella avicenniae | 3,587 | 2,208 | 120 | 118 | |
ssem | Shewanella sedimentimangrovi | 3,633 | 2,171 | 129 | 128 | |
sgla | Shewanella glacialimarina | 3,725 | 2,203 | 118 | 114 | |
sinv | Shewanella inventionis | 4,076 | 2,303 | 126 | ||
sxm | Shewanella xiamenensis | 3,959 | 2,331 | 104 | 98 | |
svm | Shewanella vesiculosa | 3,620 | 2,076 | 127 | 124 | |
shej | Shewanella sp. JNE2 | 4,058 | 2,456 | 130 | 128 | |
sseh | Shewanella seohaensis | 3,559 | 1,979 | 140 | 135 | |
schk | Shewanella chilikensis | 4,178 | 2,508 | 133 | 131 | |
sach | Shewanella acanthi | 3,391 | 2,133 | 134 | 132 | |
saeg | Shewanella aegiceratis | 3,810 | 2,280 | 126 | 123 | |
sdeo | Shewanella decolorationis | 4,410 | 2,502 | 138 | 134 | |
smes | Shewanella mesophila | 3,641 | 2,199 | 127 | 124 | |
shao | Shewanella halotolerans | 3,898 | 2,298 | 128 | 124 | |
szh | Shewanella zhangzhouensis | 3,838 | 2,303 | 131 | 130 | |
sspa | Shewanella spartinae | 3,881 | 2,299 | 127 | 123 | |
shns | Shewanella alkalitolerans | 3,804 | 2,284 | 128 | 123 | |
srhs | Shewanella rhizosphaerae | 3,856 | 2,304 | 125 | 122 | |
spsj | Shewanella psychrotolerans | 3,667 | 2,196 | 128 | 124 | |
smay | Shewanella mangrovisoli | 3,939 | 2,357 | 134 | 133 | |
sog | Shewanella oncorhynchi | 4,241 | 2,441 | 144 | 141 | |
spsr | Shewanella psychromarinicola | 4,139 | 2,402 | 125 | 12 | |
shea | Shewanella sp. Arc9-LZ | 4,040 | 2,358 | 143 | 9 | |
shel | Shewanella sp. LZH-2 | 3,891 | 2,342 | 139 | 3 | |
sheh | Shewanella sp. H8 | 3,761 | 2,252 | 123 | 7 | |
syou | Shewanella youngdeokensis | 3,506 | 2,097 | 165 | ||
shem | Shewanella sp. MTB7 | 5,301 | 2,795 | 165 | ||
Idiomarina | ||||||
ilo | Idiomarina loihiensis L2TR | 2,628 | 1,762 | 71 | 70 | |
ili | Idiomarina loihiensis GSL 199 | 2,649 | 1,760 | 68 | 68 | |
ipi | Idiomarina piscisalsi | 2,346 | 1,604 | 72 | 71 | |
idi | Idiomarina sp. X4 | 2,441 | 1,678 | 72 | 71 | |
idt | Idiomarina sp. OT37-5b | 2,607 | 1,748 | 72 | 71 | |
iab | Idiomarina abyssalis | 2,425 | 1,626 | 72 | 71 | |
idp | Idiomarina sp. PL1-037 | 2,551 | 1,702 | 72 | 18 | |
Pseudidiomarina | ||||||
panm | Pseudidiomarina andamanensis | 2,207 | 1,531 | 72 | 32 | |
Colwellia | ||||||
cps | Colwellia psychrerythraea | 4,910 | 2,468 | 117 | 117 | |
com | Colwellia sp. MT41 | 3,504 | 2,052 | 109 | 109 | |
coz | Colwellia sp. PAMC 20917 | 3,803 | 2,153 | 96 | 95 | |
colw | Colwellia sp. PAMC 21821 | 3,918 | 2,304 | 101 | 100 | |
cola | Colwellia sp. Arc7-D | 3,526 | 2,040 | 100 | 99 | |
cov | Colwellia sp. Arc7-635 | 3,841 | 2,156 | 120 | 117 | |
Cognaticolwellia | ||||||
cber | Cognaticolwellia beringensis | 3,807 | 2,267 | 105 | 101 | |
Litorilituus | ||||||
lsd | Litorilituus sediminis | 3,652 | 2,099 | 87 | 85 | |
Thalassotalea | ||||||
tht | Thalassotalea sp. HSM 43 | 3,417 | 1,969 | 99 | 98 | |
thap | Thalassotalea sp. PS06 | 3,211 | 1,885 | 104 | 103 | |
thab | Thalassotalea sp. LPB0316 | 3,057 | 1,608 | 100 | 98 | |
tpsy | Thalassotalea psychrophila | 3,916 | 2,097 | 99 | 16 | |
tnn | Thalassotalea nanhaiensis | 3,653 | 1,991 | 98 | 8 | |
tft | Thalassotalea fonticola | 3,936 | 2,164 | 99 | 10 | |
Thalassomonas | ||||||
that | Thalassomonas haliotis | 5,343 | 2,353 | 144 | 19 | |
tact | Thalassomonas actiniarum | 6,189 | 2,680 | 150 | 20 | |
tvd | Thalassomonas viridans | 6,610 | 2,709 | 150 | 20 | |
Pseudoalteromonas | ||||||
pha | Pseudoalteromonas translucida TAC125 | 3,486 | 2,144 | 134 | 134 | |
ptn | Pseudoalteromonas translucida KMM 520 | 3,809 | 2,222 | 134 | 134 | |
psm | Pseudoalteromonas sp. SM9913 | 3,712 | 2,200 | 87 | 87 | |
pseo | Pseudoalteromonas piratica | 4,003 | 2,229 | 118 | 118 | |
pia | Pseudoalteromonas issachenkonii | 3,538 | 2,210 | 130 | 129 | |
pphe | Pseudoalteromonas phenolica | 4,168 | 2,233 | 148 | 141 | |
pbw | Pseudoalteromonas sp. Bsw20308 | 4,037 | 2,365 | 126 | 126 | |
prr | Pseudoalteromonas rubra | 4,724 | 2,331 | 147 | 147 | |
plz | Pseudoalteromonas luteoviolacea | 4,917 | 2,392 | 169 | 167 | |
paln | Pseudoalteromonas aliena | 3,854 | 2,261 | 139 | 138 | |
ppis | Pseudoalteromonas piscicida | 4,258 | 2,240 | 142 | 140 | |
pea | Pseudoalteromonas espejiana | 4,065 | 2,290 | 126 | 126 | |
pspo | Pseudoalteromonas spongiae | 4,335 | 2,306 | 115 | 115 | |
part | Pseudoalteromonas arctica | 4,292 | 2,396 | 132 | 132 | |
ptu | Pseudoalteromonas tunicata | 4,419 | 2,290 | 136 | 136 | |
png | Pseudoalteromonas nigrifaciens | 3,988 | 2,275 | 134 | 133 | |
ptd | Pseudoalteromonas tetraodonis | 3,786 | 2,208 | 142 | 142 | |
psen | Pseudoalteromonas sp. NC201 | 4,454 | 2,378 | 140 | 137 | |
pdj | Pseudoalteromonas lipolytica | 4,034 | 2,340 | 131 | 130 | |
paga | Pseudoalteromonas agarivorans | 4,166 | 2,319 | 126 | 126 | |
pcar | Pseudoalteromonas carrageenovora | 3,899 | 2,345 | 133 | 132 | |
pmaa | Pseudoalteromonas marina | 3,041 | 1,867 | 131 | 130 | |
pxi | Pseudoalteromonas xiamenensis | 3,626 | 1,845 | 133 | 132 | |
pvb | Pseudoalteromonas viridis | 4,444 | 2,311 | 153 | 147 | |
psaz | Pseudoalteromonas sp. A25 | 3,947 | 2,088 | 90 | 90 | |
pdv | Pseudoalteromonas distincta | 3,861 | 2,279 | 135 | 134 | |
pfli | Pseudoalteromonas maricaloris SCSIO 43202 | 4,499 | 2,295 | 138 | 137 | |
pmaz | Pseudoalteromonas maricaloris DSM 15914 | 4,751 | 2,379 | 138 | 136 | |
psho | Pseudoalteromonas shioyasakiensis | 3,514 | 1,843 | 135 | 133 | |
psmm | Pseudoalteromonas sp. MM1 | 3,967 | 2,280 | 128 | 127 | |
pxsi | Pseudoalteromonas sp. Xi13 | 3,825 | 2,258 | 132 | 16 | |
psjs | Pseudoalteromonas sp. JSTW | 3,836 | 2,241 | 131 | 16 | |
pska | Pseudoalteromonas sp. KAN5 | 3,428 | 1,933 | 130 | 7 | |
Psychrosphaera | ||||||
psym | Psychrosphaera ytuae | 2,837 | 1,770 | 94 | 92 | |
Alteromonas | ||||||
amc | Alteromonas mediterranea DE | 3,965 | 2,245 | 77 | 77 | |
amh | Alteromonas mediterranea 615 | 3,560 | 1,974 | 84 | 84 | |
amaa | Alteromonas mediterranea DE1 | 4,321 | 2,364 | 84 | 83 | |
amal | Alteromonas mediterranea U4 | 4,084 | 2,260 | 76 | 67 | |
amae | Alteromonas mediterranea U7 | 3,856 | 2,230 | 75 | 75 | |
amao | Alteromonas mediterranea U8 | 3,795 | 2,223 | 78 | 70 | |
amad | Alteromonas mediterranea UM4b | 3,868 | 2,240 | 74 | 74 | |
amai | Alteromonas mediterranea UM7 | 4,330 | 2,355 | 80 | 77 | |
amag | Alteromonas mediterranea MED64 | 3,815 | 2,248 | 83 | 79 | |
amac | Alteromonas macleodii ATCC 27126 | 3,872 | 2,273 | 69 | 67 | |
amb | Alteromonas macleodii Balearic Sea AD45 | 3,966 | 2,249 | 88 | 88 | |
amg | Alteromonas macleodii English Channel 673 | 3,888 | 2,267 | 91 | 91 | |
amk | Alteromonas macleodii Black Sea 11 | 3,772 | 2,177 | 86 | 86 | |
alt | Alteromonas naphthalenivorans | 4,371 | 2,267 | 74 | 74 | |
aal | Alteromonas australica H 17 | 3,445 | 2,059 | 72 | 72 | |
aaus | Alteromonas australica DE170 | 3,158 | 1,822 | 83 | 83 | |
asp | Alteromonas stellipolaris LMG 21856 | 3,995 | 2,218 | 73 | 73 | |
asq | Alteromonas stellipolaris LMG 21861 | 4,078 | 2,278 | 76 | 75 | |
aaw | Alteromonas stellipolaris R10SW13 | 3,855 | 2,240 | 76 | 75 | |
alr | Alteromonas sp. RKMC-009 | 4,251 | 2,468 | 79 | 78 | |
ale | Alteromonas sp. Mac1 | 3,886 | 2,265 | 77 | 76 | |
alz | Alteromonas sp. Mac2 | 3,849 | 2,262 | 53 | 49 | |
apel | Alteromonas pelagimontana | 3,656 | 2,127 | 73 | 72 | |
alte | Alteromonas sp. 76-1 | 4,100 | 2,203 | 77 | 24 | |
altm | Alteromonas sp. Mex14 | 3,713 | 2,160 | 61 | 7 | |
altr | Alteromonas sp. RW2A1 | 3,460 | 2,014 | 83 | 19 | |
alto | Alteromonas sp. I4 | 4,540 | 2,408 | 70 | 2 | |
Salinimonas | ||||||
salm | Salinimonas sediminis | 3,719 | 2,163 | 85 | 84 | |
salk | Salinimonas iocasae | 3,642 | 2,037 | 86 | 84 | |
smaa | Salinimonas marina | 2,990 | 1,662 | 86 | 85 | |
Glaciecola | ||||||
gag | Glaciecola sp. 4H-3-7+YE-5 | 4,547 | 2,481 | 79 | 77 | |
Brumicola | ||||||
gni | Brumicola nitratireducens | 3,654 | 2,032 | 66 | 66 | |
Paraglaciecola | ||||||
gps | Paraglaciecola psychrophila | 5,618 | 2,444 | 77 | 77 | |
pmes | Paraglaciecola mesophila | 4,290 | 2,398 | 79 | 78 | |
pat | Paraglaciecola sp. T6c | 4,281 | 2,446 | 79 | 79 | |
Lacimicrobium | ||||||
lal | Lacimicrobium alkaliphilum | 3,760 | 2,167 | 68 | 68 | |
Saccharobesus | ||||||
cate | Saccharobesus litoralis | 4,340 | 2,272 | 87 | 69 | |
Saliniradius | ||||||
salh | Saliniradius amylolyticus | 2,947 | 1,843 | 66 | 57 | |
Hydrocarboniclastica | ||||||
hmi | Hydrocarboniclastica marina | 3,681 | 2,189 | 62 | 55 | |
Paraneptunicella | ||||||
paew | Paraneptunicella aestuarii | 3,804 | 2,049 | 63 | 45 | |
Agarivorans | ||||||
agz | Agarivorans sp. TSD2052 | 4,091 | 2,437 | 119 | 101 | |
agq | Agarivorans sp. B2Z047 | 4,732 | 2,457 | 118 | 43 | |
agar | Agarivorans sp. OAG1 | 4,223 | 2,482 | 115 | 35 | |
Alkalimarinus | ||||||
alkm | Alkalimarinus alittae | 3,736 | 1,770 | 73 | 34 | |
asem | Alkalimarinus sediminis | 3,634 | 1,751 | 72 | 46 | |
Catenovulum | ||||||
catt | Catenovulum adriaticum | 3,548 | 1,661 | 92 | 43 | |
Aliiglaciecola | ||||||
alii | Aliiglaciecola sp. LCG003 | 3,771 | 2,073 | 74 | 47 | |
Planctobacterium | ||||||
pmaw | Planctobacterium marinum | 4,229 | 2,110 | 64 | 18 | |
Halioxenophilus | ||||||
haro | Halioxenophilus aromaticivorans | 5,050 | 2,443 | 51 | ||
Psychromonas | ||||||
pin | Psychromonas ingrahamii | 3,545 | 2,296 | 119 | 118 | |
psy | Psychromonas sp. CNPT3 | 2,580 | 1,807 | 119 | 119 | |
Ferrimonas | ||||||
fbl | Ferrimonas balearica | 3,782 | 2,322 | 144 | 143 | |
fes | Ferrimonas lipolytica | 3,542 | 2,246 | 184 | 145 | |
Moritella | ||||||
mvs | Moritella viscosa | 4,280 | 2,521 | 425 | 169 | |
mya | Moritella yayanosii | 4,289 | 2,414 | 193 | 115 | |
mmaa | Moritella marina | 4,039 | 2,443 | 198 | 141 | |
moq | Moritella sp. 36 | 4,220 | 2,433 | 206 | 30 | |
Cellvibrio | ||||||
cja | Cellvibrio japonicus | 3,754 | 2,139 | 58 | 56 | |
ceb | Cellvibrio sp. PSBB023 | 3,906 | 2,229 | 69 | 68 | |
cell | Cellvibrio sp. PSBB006 | 4,279 | 2,355 | 57 | 55 | |
cek | Cellvibrio sp. KY-YJ-3 | 3,722 | 2,164 | 69 | 68 | |
ceg | Cellvibrio sp. KY-GH-1 | 4,712 | 2,415 | 62 | 60 | |
Saccharophagus | ||||||
sde | Saccharophagus degradans | 4,007 | 2,072 | 50 | 49 | |
Teredinibacter | ||||||
ttu | Teredinibacter turnerae | 4,255 | 2,150 | 54 | 52 | |
Simiduia | ||||||
saga | Simiduia agarivorans | 3,820 | 2,137 | 50 | 50 | |
slio | Simiduia litorea | 3,970 | 2,022 | 57 | 1 | |
Marinagarivorans | ||||||
marq | Marinagarivorans cellulosilyticus | 4,135 | 1,976 | 52 | 41 | |
Gilvimarinus | ||||||
gil | Gilvimarinus sp. DA14 | 3,391 | 1,946 | 54 | 50 | |
gjp | Gilvimarinus japonicus | 3,578 | 1,964 | 57 | ||
Marinimicrobium | ||||||
mke | Marinimicrobium sp. C6131 | 3,471 | 1,754 | 56 | 32 | |
Maricurvus | ||||||
mny | Maricurvus nonylphenolicus | 5,134 | 2,418 | 52 | ||
Spongiibacter | ||||||
spoi | Spongiibacter sp. IMCC21906 | 3,210 | 1,918 | 53 | 50 | |
snan | Spongiibacter nanhainus | 3,628 | 2,027 | 50 | 42 | |
staw | Spongiibacter taiwanensis | 3,300 | 1,681 | 51 | 40 | |
Zhongshania | ||||||
zal | Zhongshania aliphaticivorans | 3,664 | 2,127 | 57 | 56 | |
Oceanicoccus | ||||||
osg | Oceanicoccus sagamiensis | 3,878 | 1,954 | 50 | 40 | |
Microbulbifer | ||||||
mthd | Microbulbifer thermotolerans | 3,145 | 1,951 | 61 | 60 | |
micc | Microbulbifer aggregans | 3,294 | 1,977 | 93 | 61 | |
maga | Microbulbifer agarilyticus | 3,458 | 2,017 | 63 | 56 | |
mii | Microbulbifer sp. A4B17 | 4,245 | 2,083 | 82 | 66 | |
mict | Microbulbifer sp. THAF38 | 4,227 | 2,076 | 106 | 67 | |
mhyd | Microbulbifer hydrolyticus | 3,440 | 1,984 | 82 | 58 | |
mcel | Microbulbifer celer | 3,531 | 2,064 | 69 | 54 | |
micz | Microbulbifer sp. GL-2 | 4,340 | 2,045 | 72 | 59 | |
mvb | Microbulbifer variabilis | 4,142 | 1,898 | 78 | 29 | |
mpaf | Microbulbifer pacificus | 3,447 | 1,991 | 94 | 24 | |
mbrg | Microbulbifer bruguierae | 3,592 | 2,017 | 71 | 24 | |
micl | Microbulbifer sp. SH-1 | 3,750 | 1,738 | 71 | 3 | |
micy | Microbulbifer sp. YPW1 | 3,642 | 1,671 | 69 | 4 | |
mspn | Microbulbifer spongiae | 3,602 | 1,871 | 66 | 1 | |
Halioglobus | ||||||
hja | Halioglobus japonicus | 3,581 | 1,880 | 52 | 47 | |
halc | Halioglobus maricola | 3,834 | 2,077 | 53 | 47 | |
Kineobactrum | ||||||
kim | Kineobactrum salinum | 3,746 | 2,015 | 53 | 46 | |
Aequoribacter | ||||||
afus | Aequoribacter fuscus | 2,767 | 1,762 | 51 | 44 | |
Paraluminiphilus | ||||||
paqm | Candidatus Paraluminiphilus aquimaris | 2,434 | 1,490 | 47 | 15 | |
Congregibacter | ||||||
cvb | Congregibacter variabilis | 3,453 | 1,926 | 51 | ||
cbrv | Congregibacter brevis | 3,386 | 1,852 | 53 | ||
Coxiella | ||||||
cbu | Coxiella burnetii RSA 493 | 1,833 | 1,074 | 45 | 45 | |
cbs | Coxiella burnetii RSA 331 | 1,975 | 1,074 | 48 | 46 | |
cbd | Coxiella burnetii Dugway 5J108-111 | 2,045 | 1,112 | 45 | 45 | |
cbg | Coxiella burnetii CbuG_Q212 | 1,871 | 1,065 | 45 | 45 | |
cbc | Coxiella burnetii CbuK_Q154 | 1,947 | 1,090 | 45 | 45 | |
cey | Coxiella mudrowiae | 912 | 725 | 51 | 51 | |
cea | Coxiella endosymbiont of Amblyomma americanum | 537 | 497 | 43 | 43 | |
cend | Coxiella endosymbiont of Amblyomma sculptum | 551 | 493 | 44 | 30 | |
ceno | Coxiella endosymbiont of Amblyomma nuttalli | 704 | 578 | 44 | 26 | |
Rickettsiella | ||||||
rvi | Candidatus Rickettsiella viridis | 1,378 | 838 | 49 | 40 | |
Aquicella | ||||||
alg | Aquicella lusitana | 2,438 | 1,326 | 56 | 49 | |
asip | Aquicella siphonis | 2,583 | 1,340 | 55 | 48 | |
unclassified Coxiellaceae | ||||||
ceq | Coxiella-like endosymbiont of Amblyomma americanum | 563 | 517 | 44 | 40 | |
Legionella | ||||||
lpn | Legionella pneumophila subsp. pneumophila Philadelphia 1 (serogroup 1) | Ref | 2,942 | 1,550 | 52 | 52 |
lph | Legionella pneumophila subsp. pneumophila HL06041035 (serogroup 1) | 3,059 | 1,590 | 52 | 52 | |
lpo | Legionella pneumophila subsp. pneumophila Lorraine (serogroup 1) | 3,221 | 1,648 | 53 | 52 | |
lpu | Legionella pneumophila subsp. pneumophila LPE509 | 3,331 | 1,621 | 52 | 52 | |
lpm | Legionella pneumophila subsp. pneumophila Thunder Bay | 2,998 | 1,592 | 43 | 43 | |
lpf | Legionella pneumophila Lens (serogroup 1) | 2,934 | 1,569 | 54 | 54 | |
lpp | Legionella pneumophila Paris (serogroup 1) | 3,166 | 1,616 | 54 | 54 | |
lpc | Legionella pneumophila Corby | 3,204 | 1,584 | 53 | 53 | |
lpa | Legionella pneumophila 2300/99 Alcoy (serogroup 1) | 3,191 | 1,593 | 53 | 53 | |
lpe | Legionella pneumophila subsp. pneumophila ATCC 43290 (serogroup 12) | 2,942 | 1,545 | 52 | 52 | |
llo | Legionella longbeachae | 3,470 | 1,672 | 57 | 50 | |
lfa | Legionella fallonii | 3,850 | 1,739 | 64 | 60 | |
lha | Legionella hackeliae | 3,218 | 1,559 | 62 | 58 | |
lok | Legionella oakridgensis | 2,932 | 1,444 | 51 | 51 | |
lcd | Legionella clemsonensis | 2,932 | 1,487 | 54 | 44 | |
les | Candidatus Legionella polyplacis | 473 | 436 | 41 | 37 | |
lsh | Legionella sainthelensi | 3,801 | 1,727 | 66 | 52 | |
llg | Legionella lansingensis | 2,696 | 1,420 | 57 | 45 | |
lib | Legionella israelensis | 2,875 | 1,509 | 55 | 43 | |
lgt | Legionella geestiana | 2,298 | 1,288 | 55 | 45 | |
ljr | Legionella jordanis | 2,850 | 1,480 | 57 | 44 | |
lcj | Legionella cherrii | 3,271 | 1,624 | 53 | 45 | |
lwa | Legionella waltersii | 3,448 | 1,624 | 51 | 42 | |
lss | Legionella spiritensis | 3,013 | 1,585 | 52 | 43 | |
ladl | Legionella adelaidensis | 1,916 | 1,101 | 51 | 36 | |
lant | Legionella antarctica | 3,720 | 1,634 | 52 | 36 | |
lly | Legionella lytica | 3,116 | 1,435 | 59 | 34 | |
lcad | Legionella cardiaca | 2,948 | 1,472 | 60 | 17 | |
tmc | Legionella micdadei | 2,998 | 1,557 | 56 | 54 | |
Methylococcus | ||||||
mca | Methylococcus capsulatus | Ref | 2,960 | 1,821 | 54 | 54 |
metu | Methylococcus geothermalis | 2,985 | 1,879 | 57 | 50 | |
mmeo | Methylococcus mesophilus | 3,973 | 2,013 | 58 | 24 | |
meef | Methylococcus sp. EFPC2 | 3,891 | 2,096 | 63 | 16 | |
Methylomonas | ||||||
mmt | Methylomonas methanica | 4,494 | 2,281 | 59 | 58 | |
mdn | Methylomonas denitrificans | 4,550 | 2,359 | 60 | 59 | |
mdh | Methylomonas sp. DH-1 | 4,385 | 2,288 | 60 | 59 | |
mko | Methylomonas koyamae | 4,337 | 2,314 | 59 | 50 | |
metl | Methylomonas sp. LW13 | 4,638 | 2,433 | 59 | 51 | |
mpad | Methylomonas paludis | 3,239 | 1,741 | 57 | 44 | |
mell | Methylomonas sp. LL1 | 4,353 | 2,255 | 59 | 42 | |
mrp | Methylomonas rapida | 4,216 | 1,903 | 66 | 20 | |
mmot | Methylomonas montana | 4,201 | 2,111 | 60 | 14 | |
meep | Methylomonas sp. EFPC1 | 4,488 | 2,200 | 60 | 7 | |
meec | Methylomonas sp. EFPC3 | 3,981 | 2,079 | 61 | 9 | |
meup | Methylomonas sp. UP202 | 4,924 | 2,352 | 60 | 6 | |
Methylotuvimicrobium | ||||||
mah | Methylotuvimicrobium alcaliphilum | 4,086 | 2,197 | 76 | 55 | |
mbur | Methylotuvimicrobium buryatense | 4,152 | 2,243 | 58 | 48 | |
Methylovulum | ||||||
mpsy | Methylovulum psychrotolerans | 4,301 | 1,930 | 53 | 47 | |
Methylocaldum | ||||||
mmai | Methylocaldum marinum | 5,611 | 2,622 | 53 | 47 | |
msze | Methylocaldum szegediense | 5,076 | 2,153 | 76 | 24 | |
Methylospira | ||||||
mmob | Candidatus Methylospira mobilis | 4,043 | 2,193 | 61 | 50 | |
Methyloprofundus | ||||||
mein | Methyloprofundus sp. INp10_methR40d | 3,745 | 2,021 | 54 | 37 | |
Methylogaea | ||||||
moz | Methylogaea oryzae | 3,508 | 1,925 | 62 | 49 | |
Methylomagnum | ||||||
misz | Methylomagnum ishizawai | 4,661 | 2,095 | 63 | 44 | |
Methylobacter | ||||||
mesl | Methylobacter sp. S3L5C | 4,112 | 2,092 | 69 | 39 | |
Methylomarinum | ||||||
mech | Methylomarinum roseum | 4,149 | 2,113 | 60 | 10 | |
Methylomicrobium | ||||||
mlau | Methylomicrobium lacus | 3928 | 71 | |||
Methylomarinovum | ||||||
meiy | Methylomarinovum tepidoasis | 2,380 | 1,495 | 57 | 30 | |
mcau | Methylomarinovum caldicuralii | 2,614 | 1,534 | 57 | 28 | |
Francisella | ||||||
ftu | Francisella tularensis subsp. tularensis SCHU S4 | Ref | 1,605 | 999 | 48 | |
ftq | Francisella tularensis subsp. tularensis SCHU S4 NR-28534 | 2,094 | 1,062 | 48 | 48 | |
ftf | Francisella tularensis subsp. tularensis FSC198 | 1,605 | 1,003 | 48 | 48 | |
ftw | Francisella tularensis subsp. tularensis WY96-3418 | 1,634 | 1,040 | 52 | 51 | |
ftr | Francisella tularensis subsp. tularensis NE061598 | 1,836 | 995 | 48 | 48 | |
ftt | Francisella tularensis subsp. tularensis TI0902 | 1,554 | 972 | 54 | 48 | |
ftg | Francisella tularensis subsp. tularensis TIGB03 | 1,624 | 1,028 | 49 | 49 | |
ftl | Francisella tularensis subsp. holarctica LVS | 1,754 | 1,071 | 52 | 50 | |
fth | Francisella tularensis subsp. holarctica OSU18 | 1,555 | 993 | 49 | 49 | |
fta | Francisella tularensis subsp. holarctica FTNF002-00 | 1,580 | 1,017 | 51 | 51 | |
fts | Francisella tularensis subsp. holarctica F92 | 1,842 | 1,057 | 48 | 48 | |
fti | Francisella tularensis subsp. holarctica FSC200 | 1,438 | 950 | 48 | 48 | |
fto | Francisella tularensis subsp. holarctica PHIT-FT049 | 1,670 | 929 | 49 | 49 | |
ftc | Francisella tularensis subsp. holarctica FTT_1 | 2,098 | 1,120 | 48 | 48 | |
ftv | Francisella tularensis subsp. holarctica VT68 | 2,105 | 1,116 | 48 | 48 | |
ftz | Francisella tularensis subsp. holarctica 425 | 2,098 | 1,117 | 48 | 48 | |
ftm | Francisella tularensis subsp. mediasiatica FSC147 | 1,406 | 951 | 47 | 47 | |
ftn | Francisella tularensis subsp. novicida U112 | 1,719 | 1,109 | 48 | 48 | |
ftx | Francisella tularensis subsp. novicida U112 | 1,782 | 1,115 | 48 | 48 | |
ftd | Francisella tularensis subsp. novicida F6168 | 1,797 | 1,138 | 48 | 48 | |
fty | Francisella tularensis subsp. novicida DPG 3A-IS | 1,947 | 1,193 | 48 | 48 | |
fcf | Francisella cf. novicida Fx1 | 1,818 | 1,136 | 45 | 45 | |
fcn | Francisella hispaniensis 3523 | 1,854 | 1,124 | 44 | 44 | |
fhi | Francisella hispaniensis FSC454 | 1,702 | 1,067 | 52 | 45 | |
fph | Francisella philomiragia subsp. philomiragia ATCC 25017 | 1,915 | 1,231 | 48 | 48 | |
fpt | Francisella philomiragia subsp. philomiragia ATCC 25015 O#319L | 1,843 | 1,169 | 49 | 49 | |
fpi | Francisella philomiragia O#319-029 | 1,935 | 1,219 | 49 | 49 | |
fpm | Francisella philomiragia O#319-036 | 1,815 | 1,169 | 49 | 49 | |
fpx | Francisella philomiragia O#319-067 | 1,951 | 1,235 | 49 | 49 | |
fpz | Francisella philomiragia GA01-2794 | 2,044 | 1,239 | 50 | 49 | |
fpj | Francisella philomiragia GA01-2801 | 1,954 | 1,165 | 49 | 49 | |
frt | Francisella salina | 1,976 | 1,197 | 46 | 46 | |
fna | Francisella orientalis Toba 04 | 1,595 | 979 | 39 | 39 | |
fnl | Francisella orientalis LADL 07-285A | 1,624 | 949 | 50 | 50 | |
frf | Candidatus Francisella endociliophora | 1,831 | 1,076 | 49 | 49 | |
fper | Francisella persica | 1,070 | 791 | 43 | 43 | |
fha | Francisella halioticida | 2,096 | 1,318 | 54 | 46 | |
frx | Francisella uliginis | 1,990 | 1,233 | 52 | 51 | |
frm | Francisella sp. MA067296 | 1,734 | 1,063 | 48 | 48 | |
frc | Francisella frigiditurris | 1,813 | 1,117 | 51 | 51 | |
fad | Francisella adeliensis | 1,880 | 1,195 | 52 | 51 | |
fmi | Francisella marina | 1,931 | 1,207 | 53 | 52 | |
foo | Francisella opportunistica | 1,647 | 1,065 | 52 | 51 | |
fnn | Francisella noatunensis subsp. noatunensis | 1,369 | 949 | 47 | 46 | |
fsr | Francisella salimarina | 1,831 | 1,174 | 53 | 52 | |
frl | Francisella sp. LA112445 | 1,978 | 1,186 | 52 | 7 | |
Allofrancisella | ||||||
fgu | Allofrancisella guangzhouensis | 1,423 | 940 | 49 | 49 | |
afri | Allofrancisella frigidaquae | 1,480 | 982 | 52 | 51 | |
aii | Allofrancisella inopinata | 1,534 | 969 | 52 | 47 | |
Hydrogenovibrio | ||||||
tcx | Hydrogenovibrio crunogenus | 2,196 | 1,502 | 55 | 55 | |
htr | Hydrogenovibrio thermophilus | 2,369 | 1,604 | 56 | 48 | |
hmar | Hydrogenovibrio marinus | 2,322 | 1,538 | 53 | 44 | |
Thiomicrospira | ||||||
tcy | Thiomicrospira cyclica | 1,665 | 1,210 | 51 | 50 | |
tao | Thiomicrospira aerophila | 2,071 | 1,355 | 49 | 48 | |
thio | Thiomicrospira sp. S5 | 2,493 | 1,675 | 64 | 52 | |
tmh | Thiomicrospira microaerophila | 2,297 | 1,466 | 65 | 43 | |
Methylophaga | ||||||
mej | Methylophaga nitratireducenticrescens | 2,924 | 1,807 | 57 | 51 | |
mec | Methylophaga frappieri | 2,691 | 1,645 | 50 | 50 | |
mpin | Methylophaga pinxianii | 3,052 | 1,729 | 54 | 35 | |
mmaf | Methylophaga marina | 3,159 | 1,835 | 53 | 28 | |
mtha | Methylophaga thalassica | 3,191 | 1,915 | 57 | 24 | |
Cycloclasticus | ||||||
cyq | Cycloclasticus sp. P1 | 2,248 | 1,534 | 38 | 38 | |
cza | Cycloclasticus zancles | 2,584 | 1,676 | 39 | 39 | |
cyy | Cycloclasticus sp. PY97N | 2,289 | 1,562 | 49 | 45 | |
Piscirickettsia | ||||||
psal | Piscirickettsia salmonis | 3,155 | 1,592 | 75 | 58 | |
Thiomicrorhabdus | ||||||
thig | Thiomicrorhabdus sediminis | 2,082 | 1,405 | 57 | 49 | |
txa | Thiomicrorhabdus xiamenensis | 2,316 | 1,518 | 62 | 45 | |
tib | Thiomicrorhabdus immobilis | 2,251 | 1,273 | 56 | 25 | |
tlh | Thiomicrorhabdus lithotrophica | 2,274 | 1,450 | 57 | 16 | |
Thiosulfatimonas | ||||||
tse | Thiosulfatimonas sediminis | 2,501 | 1,618 | 66 | 53 | |
Thiosulfativibrio | ||||||
tzo | Thiosulfativibrio zosterae | 2,373 | 1,544 | 54 | 42 | |
Thioploca | ||||||
tig | Thioploca ingrica | 3,964 | 1,705 | 47 | 47 | |
Beggiatoa | ||||||
blep | Beggiatoa leptomitoformis | 3,516 | 1,734 | 60 | 52 | |
Thiothrix | ||||||
this | Candidatus Thiothrix singaporensis | 4,097 | 1,977 | 53 | 41 | |
tun | Thiothrix unzii | 3,626 | 1,943 | 55 | 37 | |
tlo | Thiothrix litoralis | 4,045 | 2,157 | 57 | 42 | |
tsb | Thiothrix subterranea | 3,863 | 1,991 | 62 | 41 | |
tani | Candidatus Thiothrix anitrata | 3,387 | 1,779 | 55 | 37 | |
twn | Thiothrix winogradskyi | 4,201 | 1,996 | 71 | 38 | |
tlc | Thiothrix lacustris | 3,476 | 1,896 | 57 | 14 | |
tsj | Candidatus Thiothrix sulfatifontis | 3,589 | 1,883 | 51 | 8 | |
tput | Candidatus Thiothrix putei | 4,134 | 1,991 | 59 | 1 | |
Thiocaldithrix | ||||||
tdu | Candidatus Thiocaldithrix dubininis | 3,021 | 1,679 | 62 | 13 | |
Cysteiniphilum | ||||||
cys | Cysteiniphilum sp. QT6929 | 2,287 | 1,260 | 63 | 23 | |
Nitrosococcus | ||||||
noc | Nitrosococcus oceani | 3,017 | 1,721 | 54 | 53 | |
nhl | Nitrosococcus halophilus | 3,817 | 2,038 | 55 | 53 | |
nwa | Nitrosococcus watsonii | 2,908 | 1,683 | 55 | 54 | |
nwr | Nitrosococcus wardiae | 3,593 | 1,929 | 55 | 53 | |
Allochromatium | ||||||
alv | Allochromatium vinosum | 3,220 | 1,979 | 64 | 62 | |
atep | Allochromatium tepidum | 3,171 | 1,802 | 61 | 58 | |
Thiocystis | ||||||
tvi | Thiocystis violascens | 4,330 | 2,295 | 64 | 61 | |
Thioflavicoccus | ||||||
tmb | Thioflavicoccus mobilis | 3,562 | 2,020 | 57 | 55 | |
Marichromatium | ||||||
mpur | Marichromatium purpuratum | 3,256 | 1,976 | 65 | 65 | |
Nitrosoglobus | ||||||
ntt | Candidatus Nitrosoglobus terrae | 1,844 | 1,239 | 50 | 50 | |
Thiodictyon | ||||||
tsy | Candidatus Thiodictyon syntrophicum | 6,237 | 2,573 | 59 | 58 | |
Rheinheimera | ||||||
rhh | Rheinheimera sp. D18 | 2,961 | 1,875 | 88 | 87 | |
rhei | Rheinheimera sp. F8 | 3,781 | 2,038 | 92 | 92 | |
Thermochromatium | ||||||
ttp | Thermochromatium tepidum | 2,539 | 1,741 | 62 | 61 | |
Nitrosacidococcus | ||||||
ntg | Candidatus Nitrosacidococcus tergens | 1,770 | 1,171 | 117 | 53 | |
Thiohalocapsa | ||||||
thip | Thiohalocapsa sp. PB-PSB1 | 6,286 | 2,384 | 58 | 56 | |
Caldichromatium | ||||||
cjap | Caldichromatium japonicum | 2,627 | 1,666 | 63 | 61 | |
Thiocapsa | ||||||
thim | Thiocapsa sp. M50B4 | 4,893 | 2,315 | 59 | 56 | |
tbog | Thiocapsa bogorovii | 4,854 | 2,342 | 58 | 56 | |
Thiorhodovibrio | ||||||
tlr | Thiorhodovibrio litoralis | 4,834 | 2,170 | 67 | 56 | |
tfri | Thiorhodovibrio frisius | 4,861 | 2,145 | 110 | 57 | |
twg | Thiorhodovibrio winogradskyi | 4,833 | 2,071 | 73 | 56 | |
Alkalilimnicola | ||||||
aeh | Alkalilimnicola ehrlichii | 2,865 | 1,910 | 57 | 57 | |
Halorhodospira | ||||||
hha | Halorhodospira halophila | 2,407 | 1,669 | 55 | 55 | |
hhk | Halorhodospira halochloris | 2,585 | 1,565 | 52 | 51 | |
Ectothiorhodospira | ||||||
hhc | Ectothiorhodospira haloalkaliphila | 2,984 | 1,819 | 50 | 50 | |
ebs | Ectothiorhodospira sp. BSL-9 | 2,963 | 1,914 | 53 | 53 | |
Thioalkalivibrio | ||||||
tgr | Thioalkalivibrio sulfidiphilus | 3,283 | 1,919 | 51 | 50 | |
tkm | Thioalkalivibrio sp. K90mix | 2,855 | 1,683 | 55 | 54 | |
tni | Thioalkalivibrio nitratireducens | 3,780 | 2,014 | 48 | 48 | |
tti | Thioalkalivibrio paradoxus | 3,418 | 1,946 | 49 | 48 | |
tvr | Thioalkalivibrio versutus | 2,672 | 1,667 | 49 | 49 | |
Spiribacter | ||||||
ssal | Spiribacter salinus | 1,684 | 1,304 | 48 | 48 | |
spiu | Spiribacter curvatus | 1,862 | 1,390 | 48 | 48 | |
sros | Spiribacter roseus | 1,843 | 1,391 | 52 | 51 | |
spiz | Spiribacter sp. 2438 | 1,831 | 1,365 | 52 | 51 | |
shai | Spiribacter halobius | 3,769 | 2,138 | 53 | 22 | |
Acidihalobacter | ||||||
aprs | Acidihalobacter prosperus | 3,233 | 1,937 | 54 | 52 | |
aaeo | Acidihalobacter aeolianus | 3,194 | 1,898 | 53 | 51 | |
afy | Acidihalobacter ferrooxydans | 3,089 | 1,910 | 52 | 51 | |
Aquisalimonas | ||||||
nax | Aquisalimonas sp. 2447 | 3,626 | 2,148 | 52 | 51 | |
Halothiobacillus | ||||||
hna | Halothiobacillus neapolitanus | 2,357 | 1,566 | 52 | 51 | |
haz | Halothiobacillus diazotrophicus | 2,525 | 1,658 | 53 | 52 | |
Wenzhouxiangella | ||||||
wma | Wenzhouxiangella marina | 3,026 | 1,630 | 49 | 48 | |
wez | Wenzhouxiangella sp. AB-CW3 | 3,235 | 1,465 | 54 | 28 | |
Granulosicoccus | ||||||
gai | Granulosicoccus antarcticus | 6,761 | 3,463 | 74 | 46 | |
Guyparkeria | ||||||
ghl | Guyparkeria halophila | 2,283 | 1,575 | 55 | 54 | |
Thiolapillus | ||||||
tbn | Thiolapillus brandeum | 2,841 | 1,738 | 40 | 40 | |
Endoriftia | ||||||
eps | Candidatus Endoriftia persephone | 3,160 | 1,800 | 59 | 58 | |
Sedimenticola | ||||||
seds | Sedimenticola thiotaurini | 3,417 | 2,221 | 57 | 57 | |
Tenderia | ||||||
tee | Candidatus Tenderia electrophaga | 3,349 | 1,935 | 45 | 45 | |
Woeseia | ||||||
woc | Woeseia oceani | 3,571 | 2,003 | 52 | 50 | |
Thiohalobacter | ||||||
ttc | Thiohalobacter thiocyanaticus | 3,026 | 1,830 | 48 | 48 | |
thic | Thiohalobacter sp. COW1 | 3,357 | 1,838 | 54 | 48 | |
Hahella | ||||||
hch | Hahella chejuensis | 6,778 | 2,959 | 82 | 79 | |
hahe | Hahella sp. KA22 | 5,990 | 2,897 | 86 | 83 | |
hahh | Hahella sp. HNIBRBA332 | 6,259 | 2,895 | 85 | 81 | |
Chromohalobacter | ||||||
csa | Chromohalobacter israelensis | 3,298 | 2,301 | 86 | 86 | |
ccag | Chromohalobacter canadensis | 3,237 | 2,213 | 84 | 83 | |
Halomonas | ||||||
hel | Halomonas elongata | 3,625 | 2,450 | 82 | 81 | |
hcs | Halomonas campaniensis | 3,552 | 2,426 | 79 | 79 | |
hak | Halomonas sp. KO116 | 4,814 | 2,870 | 81 | 80 | |
ham | Halomonas sp. R57-5 | 4,599 | 2,904 | 78 | 78 | |
hhu | Halomonas huangheensis | 3,993 | 2,672 | 76 | 76 | |
hco | Halomonas chromatireducens | 3,680 | 2,320 | 68 | 65 | |
hsi | Halomonas aestuarii | 3,150 | 2,154 | 80 | 79 | |
halo | Halomonas sp. 1513 | 3,646 | 2,457 | 82 | 81 | |
hhh | Halomonas hydrothermalis | 3,520 | 2,407 | 83 | 82 | |
hbe | Halomonas beimenensis | 3,807 | 2,464 | 85 | 85 | |
hag | Halomonas sp. GFAJ-1 | 3,185 | 2,206 | 90 | 89 | |
haf | Halomonas sp. SF2003 | 3,408 | 2,363 | 97 | 96 | |
hsv | Halomonas sulfidivorans | 4,161 | 2,677 | 84 | 80 | |
hpro | Halomonas profundus | 4,662 | 2,944 | 84 | 81 | |
hqd | Halomonas qaidamensis | 3,353 | 2,220 | 83 | 82 | |
hbh | Halomonas binhaiensis | 4,154 | 2,387 | 83 | 82 | |
hbp | Halomonas sp. TD01 | 3,844 | 2,383 | 78 | 78 | |
half | Halomonas alkaliantarctica | 3,789 | 2,506 | 82 | 81 | |
hhao | Halomonas halophila | 3,256 | 2,203 | 92 | 90 | |
haso | Halomonas sp. 'Soap Lake #7' | 4,183 | 2,705 | 83 | 81 | |
halw | Halomonas alkalicola | 3,152 | 2,049 | 81 | 80 | |
hash | Halomonas sp. SH5A2 | 3,417 | 2,284 | 83 | 81 | |
hpis | Halomonas piscis | 2,871 | 1,857 | 84 | 83 | |
hams | Halomonas sp. MS1 | 4,122 | 2,631 | 83 | 81 | |
hcam | Halomonas sp. SS10-MC5 | 4,044 | 2,697 | 83 | 80 | |
haah | Halomonas sp. A3H3 | 5,290 | 3,069 | 65 | 15 | |
haxh | Halomonas sp. XH26 | 3,624 | 2,421 | 83 | 15 | |
habd | Halomonas sp. BDJS001 | 4,397 | 2,780 | 81 | 6 | |
hqn | Halomonas qinghailakensis | 3,344 | 2,253 | 82 | 4 | |
hafn | Halomonas sp. FeN2 | 4,286 | 2,775 | 82 | 1 | |
hamc | Halomonas sp. MCCC 1A13316 | 3988 | 85 | |||
hany | Halomonas sp. NyZ770 | 3591 | 83 | |||
Vreelandella | ||||||
halk | Vreelandella alkaliphila | 3,551 | 2,389 | 82 | 81 | |
hvn | Vreelandella venusta | 3,899 | 2,570 | 82 | 81 | |
hol | Vreelandella olivaria | 7,375 | 2,589 | 78 | 78 | |
hsr | Vreelandella sulfidaeris | 7,115 | 2,087 | 80 | 79 | |
hpiz | Vreelandella piezotolerans | 3,509 | 2,389 | 82 | 81 | |
hnp | Vreelandella neptunia | 4,463 | 2,828 | 82 | 81 | |
htt | Vreelandella titanicae | 4,706 | 2,992 | 82 | 81 | |
hmd | Vreelandella aquamarina SCSIO 43005 | 3,470 | 2,259 | 84 | 82 | |
haxi | Vreelandella aquamarina Althf1 | 5,503 | 2,365 | 81 | 80 | |
Billgrantia | ||||||
hsx | Billgrantia sulfidoxydans | 4,039 | 2,653 | 85 | 80 | |
htx | Billgrantia tianxiuensis | 3,981 | 2,415 | 81 | 80 | |
Carsonella | ||||||
crp | Candidatus Carsonella ruddii PV | 182 | 141 | 31 | 31 | |
cru | Candidatus Carsonella ruddii CE | 190 | 148 | 31 | 31 | |
crc | Candidatus Carsonella ruddii CS | 190 | 148 | 31 | 31 | |
crt | Candidatus Carsonella ruddii HT | 180 | 137 | 31 | 31 | |
crh | Candidatus Carsonella ruddii HC | 192 | 149 | 31 | 31 | |
crv | Candidatus Carsonella ruddii PC | 182 | 139 | 31 | 31 | |
cri | Candidatus Carsonella ruddii DC | 207 | 159 | 31 | 31 | |
crr | Candidatus Carsonella ruddii (Diaphorina cf. continua) | 203 | 157 | 31 | 31 | |
crud | Candidatus Carsonella ruddii (Anomoneura mori) | 190 | 137 | 30 | ||
Zymobacter | ||||||
zpl | Zymobacter palmae | 2,671 | 1,634 | 75 | 75 | |
Halotalea | ||||||
haa | Halotalea alkalilenta | 3,744 | 2,571 | 89 | 88 | |
Cobetia | ||||||
cmai | Cobetia marina | 3,295 | 2,266 | 97 | 96 | |
camh | Cobetia amphilecti | 3,324 | 2,213 | 98 | 97 | |
cobe | Cobetia sp. AM6 | 3,501 | 2,303 | 76 | 73 | |
cobb | Cobetia sp. 4B | 3,431 | 2,317 | 97 | 96 | |
cobd | Cobetia sp. D5 | 3,398 | 2,306 | 97 | 96 | |
cobc | Cobetia sp. cqz5-12 | 3,371 | 2,315 | 97 | 2 | |
Kushneria | ||||||
kus | Kushneria konosiri | 3,172 | 2,166 | 82 | 81 | |
kma | Kushneria marisflavi | 3,207 | 2,240 | 82 | 81 | |
kuy | Kushneria phosphatilytica | 3,267 | 2,160 | 80 | 79 | |
Pistricoccus | ||||||
paur | Pistricoccus aurantiacus | 3,422 | 2,222 | 72 | 71 | |
Salinicola | ||||||
sajs | Salinicola sp. JS01 | 3,892 | 2,395 | 95 | 92 | |
Alcanivorax | ||||||
abo | Alcanivorax borkumensis | 2,755 | 1,781 | 51 | 51 | |
aln | Alcanivorax sp. NBRC 101098 | 2,824 | 1,764 | 51 | 51 | |
alca | Alcanivorax sp. ALC70 | 4,435 | 2,158 | 59 | 50 | |
alci | Alcanivorax sp. IO_7 | 2,065 | 653 | 54 | 52 | |
Alloalcanivorax | ||||||
adi | Alloalcanivorax dieselolei | 4,417 | 2,566 | 48 | 48 | |
axe | Alloalcanivorax xenomutans | 4,148 | 2,420 | 50 | 49 | |
Isoalcanivorax | ||||||
apac | Isoalcanivorax pacificus | 3,702 | 2,067 | 52 | 51 | |
Marinomonas | ||||||
mmw | Marinomonas sp. MWYL1 | 4,439 | 2,821 | 111 | 111 | |
mme | Marinomonas mediterranea | 4,121 | 2,432 | 103 | 102 | |
mpc | Marinomonas posidonica | 3,491 | 2,320 | 108 | 107 | |
mpri | Marinomonas primoryensis | 3,803 | 2,471 | 95 | 95 | |
mard | Marinomonas arctica | 4,059 | 2,603 | 109 | 108 | |
mfoi | Marinomonas foliarum | 3,562 | 2,369 | 109 | 108 | |
mprf | Marinomonas profundi | 3,258 | 2,151 | 105 | 104 | |
mrhi | Marinomonas rhizomae | 3,948 | 2,418 | 110 | 109 | |
mpon | Marinomonas pontica | 3,227 | 2,113 | 106 | 106 | |
math | Marinomonas sp. THO17 | 3,600 | 2,217 | 101 | ||
Thalassolituus | ||||||
tol | Thalassolituus oleivorans MIL-1 | 3,662 | 1,998 | 66 | 65 | |
tor | Thalassolituus oleivorans R6-15 | 3,372 | 1,929 | 61 | 61 | |
twan | Thalassolituus hydrocarboniclasticus | 3,569 | 1,754 | 70 | 69 | |
Oleispira | ||||||
oai | Oleispira antarctica | 3,919 | 2,134 | 67 | 66 | |
Marinobacterium | ||||||
mars | Marinobacterium aestuarii | 4,413 | 2,775 | 105 | 104 | |
mgeo | Marinobacterium iners | 3,637 | 2,194 | 90 | 87 | |
msec | Marinobacterium sediminicola | 3,162 | 2,085 | 99 | 98 | |
marl | Marinobacterium sp. LSUCC0821 | 2,231 | 1,419 | 67 | 66 | |
mrz | Marinobacterium rhizophilum | 4,512 | 2,632 | 107 | 102 | |
Bacterioplanes | ||||||
bsan | Bacterioplanes sanyensis | 3,846 | 2,065 | 71 | 69 | |
Neptunomonas | ||||||
ncu | Neptunomonas concharum | 3,273 | 2,124 | 88 | 87 | |
njp | Neptunomonas japonica | 3,697 | 2,288 | 84 | 84 | |
Nitrincola | ||||||
nik | Nitrincola iocasae | 3,742 | 2,379 | 77 | 74 | |
Bermanella | ||||||
bmar | Bermanella marisrubri | 3,227 | 1,933 | 61 | 60 | |
Amphritea | ||||||
ajp | Amphritea japonica | 3,357 | 2,132 | 87 | 87 | |
Venatoribacter | ||||||
vcw | Venatoribacter cucullus | 2,567 | 1,674 | 67 | 65 | |
Bacterioplanoides | ||||||
bacz | Bacterioplanoides sp. SCSIO 12839 | 3,434 | 1,625 | 67 | 65 | |
Gynuella | ||||||
gsn | Gynuella sunshinyii | 5,934 | 2,710 | 57 | 56 | |
Reinekea | ||||||
rfo | Reinekea forsetii | 3,275 | 2,061 | 73 | 53 | |
Oleiphilus | ||||||
ome | Oleiphilus messinensis | 5,502 | 2,568 | 78 | 75 | |
Litorivicinus | ||||||
llp | Litorivicinus lipolyticus | 2,332 | 1,617 | 53 | 50 | |
Endozoicomonas | ||||||
enw | Endozoicomonas sp. SCSIO W0465 | 6,167 | 2,485 | 96 | 72 | |
eei | Endozoicomonas euniceicola | 5,120 | 2,040 | 135 | 115 | |
eng | Endozoicomonas sp. GU-1 | 4,851 | 2,017 | 114 | 65 | |
emp | Endozoicomonas montiporae | 4,572 | 2,306 | 185 | 66 | |
Pleionea | ||||||
plei | Pleionea litopenaei | 3,798 | 1,914 | 58 | 27 | |
Portiera | ||||||
ple | Candidatus Portiera aleyrodidarum BT-B-HRs | 256 | 236 | 37 | 37 | |
ply | Candidatus Portiera aleyrodidarum BT-B-HRs | 273 | 227 | 34 | 34 | |
plr | Candidatus Portiera aleyrodidarum BT-QVLC | 247 | 237 | 38 | 38 | |
plo | Candidatus Portiera aleyrodidarum BT-QVLC | 280 | 229 | 34 | 34 | |
pld | Candidatus Portiera aleyrodidarum TV | 269 | 262 | 38 | 38 | |
plb | Candidatus Portiera aleyrodidarum TV-BCN | 268 | 262 | 39 | 39 | |
plc | Candidatus Portiera aleyrodidarum AD-CAI | 278 | 271 | 39 | 39 | |
pli | Candidatus Portiera aleyrodidarum AF-CAI | 278 | 272 | 39 | 39 | |
paly | Candidatus Portiera aleyrodidarum MED (Bemisia tabaci) | 255 | 232 | 36 | 36 | |
Johnevansia | ||||||
eme | Candidatus Johnevansia muelleri | 330 | 317 | 39 | 38 | |
Aeromonas | ||||||
aha | Aeromonas hydrophila subsp. hydrophila ATCC 7966 | 4,122 | 2,787 | 159 | 158 | |
ahy | Aeromonas hydrophila ML09-119 | 4,434 | 2,837 | 143 | 142 | |
ahd | Aeromonas hydrophila YL17 | 4,078 | 2,724 | 157 | 157 | |
ahr | Aeromonas hydrophila subsp. hydrophila AL09-71 | 4,297 | 2,794 | 144 | 143 | |
ahp | Aeromonas hydrophila pc104A | 4,300 | 2,797 | 144 | 143 | |
ahj | Aeromonas hydrophila J-1 | 4,268 | 2,800 | 143 | 142 | |
ahh | Aeromonas hydrophila AL06-06 | 4,251 | 2,804 | 147 | 144 | |
ahi | Aeromonas hydrophila AH10 | 4,196 | 2,743 | 160 | 160 | |
aaj | Aeromonas hydrophila MX16A | 4,195 | 2,811 | 161 | 159 | |
asa | Aeromonas salmonicida subsp. salmonicida A449 | 4,413 | 2,769 | 147 | 142 | |
aeo | Aeromonas salmonicida O23A | 4,690 | 2,803 | 149 | 149 | |
avr | Aeromonas veronii B565 | 4,028 | 2,626 | 133 | 133 | |
avo | Aeromonas veronii TH0426 | 4,244 | 2,733 | 153 | 152 | |
amed | Aeromonas media | 4,385 | 2,656 | 156 | 154 | |
asr | Aeromonas schubertii | 4,358 | 2,635 | 100 | 100 | |
adh | Aeromonas dhakensis | 4,279 | 2,748 | 165 | 160 | |
acav | Aeromonas caviae | 3,431 | 2,230 | 158 | 156 | |
aem | Aeromonas sp. CU5 | 3,926 | 2,630 | 161 | 158 | |
aea | Aeromonas sp. ASNIH3 | 4,508 | 2,812 | 158 | 156 | |
arv | Aeromonas rivipollensis | 3,885 | 2,598 | 161 | 158 | |
aes | Aeromonas sp. ASNIH5 | 4,240 | 2,708 | 160 | 157 | |
ael | Aeromonas encheleia | 4,052 | 2,666 | 163 | 159 | |
asim | Aeromonas simiae | 3,552 | 2,456 | 160 | 159 | |
aall | Aeromonas allosaccharophila | 4,032 | 2,722 | 160 | 158 | |
ajd | Aeromonas jandaei | 4,064 | 2,693 | 159 | 158 | |
ariv | Aeromonas rivuli | 3,830 | 2,557 | 157 | 156 | |
asaa | Aeromonas sanarellii | 4,203 | 2,540 | 155 | 153 | |
aej | Aeromonas sp. 2692-1 | 4,384 | 2,733 | 164 | 159 | |
abes | Aeromonas bestiarum | 4,173 | 2,711 | 149 | 64 | |
aero | Aeromonas sp. CA23 | 4398 | 160 | |||
aerz | Aeromonas sp. 1805 | 4205 | 164 | |||
Tolumonas | ||||||
tau | Tolumonas auensis | 3,130 | 2,217 | 120 | 118 | |
Oceanimonas | ||||||
oce | Oceanimonas sp. GK1 | 3,221 | 2,331 | 112 | 111 | |
ope | Oceanimonas pelagia | 3,306 | 2,247 | 123 | 67 | |
Oceanisphaera | ||||||
ocm | Oceanisphaera avium | 2,484 | 1,799 | 117 | 100 | |
opf | Oceanisphaera profunda | 2,882 | 2,034 | 120 | 101 | |
Zobellella | ||||||
zdf | Zobellella denitrificans | 3,637 | 2,527 | 122 | 106 | |
Pseudaeromonas | ||||||
pagi | Pseudaeromonas aegiceratis | 3,302 | 2,325 | 133 | ||
Kangiella | ||||||
kko | Kangiella koreensis | 2,632 | 1,613 | 51 | 50 | |
kge | Kangiella geojedonensis | 2,208 | 1,444 | 50 | 49 | |
ksd | Kangiella sediminilitoris | 2,308 | 1,490 | 50 | 45 | |
kpd | Kangiella profundi | 2,418 | 1,551 | 51 | 46 | |
kam | Kangiella aquimarina | 2,448 | 1,522 | 54 | 21 | |
Dichelobacter | ||||||
dno | Dichelobacter nodosus | 1,280 | 958 | 55 | 55 | |
Cardiobacterium | ||||||
chj | Cardiobacterium hominis | 2,412 | 1,423 | 62 | 50 | |
Suttonella | ||||||
sutr | Suttonella sp. R2A3 | 1,830 | 1,346 | 57 | 39 | |
Ignatzschineria | ||||||
ign | Ignatzschineria rhizosphaerae | 2,707 | 1,530 | 91 | 50 | |
ilv | Ignatzschineria larvae | 2,038 | 1,395 | 78 | 8 | |
Wohlfahrtiimonas | ||||||
wcn | Wohlfahrtiimonas chitiniclastica | 1,940 | 1,319 | 72 | 13 | |
Gilliamella | ||||||
gap | Gilliamella apicola | 2,803 | 1,804 | 63 | 63 | |
gaq | Gilliamella apis | 2,305 | 1,657 | 65 | 37 | |
Frischella | ||||||
fpp | Frischella perrara | 2,272 | 1,567 | 66 | 66 | |
Zophobihabitans | ||||||
orb | Zophobihabitans entericus | 2,342 | 1,645 | 64 | 50 | |
Orbus | ||||||
omo | Orbus mooreae | 2,678 | 1,846 | 71 | 15 | |
owh | Orbus wheelerorum | 2,482 | 1,669 | 67 | 15 | |
osv | Orbus sturtevantii | 2,477 | 1,682 | 67 | 17 | |
Utexia | ||||||
ubr | Utexia brackfieldae | 2,085 | 1,529 | 66 | 5 | |
Steroidobacter | ||||||
sdf | Steroidobacter denitrificans | 2,975 | 1,809 | 51 | 51 | |
Solimonas | ||||||
sok | Solimonas sp. K1W22B-7 | 4,699 | 2,284 | 65 | 49 | |
Sinimarinibacterium | ||||||
sini | Sinimarinibacterium sp. NLF-5-8 | 2,933 | 1,736 | 59 | 49 | |
Flagellatimonas | ||||||
fce | Flagellatimonas centrodinii | 3,363 | 1,739 | 59 | 48 | |
Immundisolibacter | ||||||
gbi | Immundisolibacter cernigliae | 2,926 | 1,812 | 52 | 51 | |
Sulfuricaulis | ||||||
slim | Sulfuricaulis limicola | 2,763 | 1,617 | 49 | 45 | |
Sulfurifustis | ||||||
sva | Sulfurifustis variabilis | 3,864 | 2,045 | 49 | 45 | |
Acidiferrobacter | ||||||
acii | Acidiferrobacter sp. SPIII_3 | 3,181 | 1,720 | 54 | 48 | |
aty | Acidiferrobacter thiooxydans | 3,039 | 1,724 | 53 | 48 | |
Salinisphaera | ||||||
saln | Salinisphaera sp. LB1 | 3,756 | 2,219 | 53 | 47 | |
Comchoanobacter | ||||||
gbac | Candidatus Comchoanobacter bicostacola | 930 | 303 | 42 | 35 | |
Pseudothioglobus | ||||||
tsn | Candidatus Pseudothioglobus singularis | 1,682 | 1,229 | 42 | 42 | |
Thioglobus | ||||||
thin | Candidatus Thioglobus sp. NP1 | 1,678 | 1,212 | 42 | 39 | |
tho | Candidatus Thioglobus autotrophicus | 1,506 | 1,052 | 39 | 39 | |
Ruthturnera | ||||||
rma | Candidatus Ruthia magnifica (Calyptogena magnifica) | 976 | 813 | 41 | 41 | |
reo | Candidatus Ruthia endofausta | 1,204 | 840 | 43 | 41 | |
Vesicomyosocius | ||||||
vok | Candidatus Vesicomyosocius okutanii | 937 | 776 | 38 | 38 | |
Nardonella | ||||||
eof | Endosymbiont of Sipalinus gigas | 228 | 210 | 39 | 17 | |
eor | Endosymbiont of Rhynchophorus ferrugineus | 196 | 182 | 34 | 13 | |
eop | Endosymbiont of Pachyrhynchus infernalis | 212 | 201 | 41 | 17 | |
Reidiella | ||||||
rev | Candidatus Reidiella endopervernicosa | 3,536 | 1,666 | 49 | 46 | |
Azoamicus | ||||||
acil | Candidatus Azoamicus ciliaticola | 310 | 281 | 39 | 23 | |
Celerinatantimonas | ||||||
cdiz | Celerinatantimonas diazotrophica | 3,600 | 2,384 | 99 | 80 | |
Steffania | ||||||
sade | Candidatus Steffania adelgidicola | 737 | 630 | 45 | 44 | |
Palibaumannia | ||||||
bci | Baumannia cicadellinicola Hc (Homalodisca coagulata) | 595 | 568 | 46 | 46 | |
bcib | Candidatus Palibaumannia cicadellinicola BGSS | 689 | 640 | 45 | 45 | |
bcig | Candidatus Palibaumannia cicadellinicola B-GSS | 550 | 507 | 44 | 44 | |
unclassified Gammaproteobacteria | ||||||
ebh | Endosymbiont of Bathymodiolus septemdierum | 1,471 | 1,021 | 38 | 38 | |
bthg | Bathymodiolus thermophilus thioautotrophic gill symbiont | 2,067 | 1,085 | 41 | 41 | |
eag | Candidatus Ecksteinia adelgidicola | 433 | 416 | 37 | 9 | |
cbly | Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln | 3,104 | 1,762 | 60 | 16 | |
gpb | Gamma proteobacterium HdN1 | 3,763 | 2,013 | 56 | 56 | |
enm | Endosymbiont of unidentified scaly snail isolate Monju | 2,249 | 1,548 | 43 | 43 | |
eeu | Endosymbiont of Euscepes postfasciatus | 210 | 202 | 32 | 16 | |
ifo | Isorropodon fossajaponicum endosymbiont | 1,221 | 925 | 39 | 39 | |
aphf | Abyssogena phaseoliformis symbiont | 1,175 | 867 | 39 | 39 | |
Betaproteobacteria | ||||||
Neisseria | ||||||
nme | Neisseria meningitidis MC58 (serogroup B) | Ref | 2,063 | 1,271 | ||
nmp | Neisseria meningitidis alpha710 (serogroup B) | 2,017 | 1,267 | 69 | 69 | |
nmh | Neisseria meningitidis H44/76 (serogroup B) | 1,961 | 1,262 | 71 | 71 | |
nmd | Neisseria meningitidis G2136 (serogroup B) | 1,928 | 1,255 | 71 | 71 | |
nmm | Neisseria meningitidis M01-240149 (serogroup B) | 1,936 | 1,269 | 71 | 71 | |
nms | Neisseria meningitidis M01-240355 (serogroup B) | 1,971 | 1,281 | 71 | 71 | |
nmq | Neisseria meningitidis M04-240196 (serogroup B) | 1,947 | 1,258 | 71 | 71 | |
nmz | Neisseria meningitidis NZ-05/33 (serogroup B) | 1,948 | 1,271 | 71 | 71 | |
nma | Neisseria meningitidis Z2491 (serogroup A) | 1,909 | 1,253 | |||
nmw | Neisseria meningitidis WUE 2594 (serogroup A) | 1,941 | 1,240 | 67 | 67 | |
nmx | Neisseria meningitidis 510612 (serogroup A) | 2,461 | 1,269 | 71 | 71 | |
nmc | Neisseria meningitidis FAM18 (serogroup C) | 1,917 | 1,265 | |||
nmn | Neisseria meningitidis 053442 (serogroup C) | 2,020 | 1,268 | 71 | 71 | |
nmt | Neisseria meningitidis 8013 (serogroup C) | 1,913 | 1,265 | 80 | 74 | |
nmi | Neisseria meningitidis alpha14 (cnl strain) | 1,872 | 1,218 | 72 | 72 | |
ngo | Neisseria gonorrhoeae FA 1090 | Ref | 2,157 | 1,188 | 68 | 67 |
ngk | Neisseria gonorrhoeae NCCP11945 | 2,674 | 1,297 | 67 | 67 | |
nla | Neisseria lactamica | 1,972 | 1,245 | 71 | 71 | |
nel | Neisseria elongata | 2,093 | 1,292 | 74 | 74 | |
nwe | Neisseria weaveri | 1,981 | 1,342 | 69 | 68 | |
nsi | Neisseria mucosa FDAARGOS_260 | 2,445 | 1,551 | 75 | 74 | |
nmj | Neisseria mucosa ATCC 19696 | 2,386 | 1,513 | 75 | 74 | |
nei | Neisseria chenwenguii | 2,243 | 1,425 | 74 | 73 | |
nek | Neisseria sp. KEM232 | 2,210 | 1,340 | 51 | 50 | |
nfv | Neisseria flavescens | 2,045 | 1,330 | 80 | 77 | |
nsf | Neisseria subflava | 1,954 | 1,348 | 74 | 73 | |
nzl | Neisseria zalophi | 2,146 | 1,442 | 70 | 69 | |
naq | Neisseria animalis | 2,008 | 1,306 | 79 | 78 | |
nbl | Neisseria brasiliensis | 2,457 | 1,579 | 77 | 76 | |
nzo | Neisseria zoodegmatis | 2,279 | 1,483 | 69 | 68 | |
nci | Neisseria canis | 2,362 | 1,508 | 71 | 70 | |
ncz | Neisseria cinerea | 1,710 | 1,169 | 73 | 72 | |
nani | Neisseria animaloris | 2,063 | 1,438 | 68 | 68 | |
nbc | Neisseria bacilliformis | 2,288 | 1,369 | 75 | 73 | |
nwd | Neisseria wadsworthii | 2,264 | 1,468 | 75 | 73 | |
nsg | Neisseria shayeganii | 2,270 | 1,373 | 73 | 72 | |
nmus | Neisseria musculi | 2,719 | 1,509 | 66 | 55 | |
nsc | Neisseria sicca | 2,221 | 1,512 | 77 | 73 | |
npf | Neisseria perflava | 2,049 | 1,376 | 76 | 74 | |
ndn | Neisseria dentiae | 2,422 | 1,571 | 71 | 70 | |
nwx | Neisseria weixii | 1,927 | 1,082 | 70 | 69 | |
ndu | Neisseria dumasiana | 2,369 | 1,533 | 71 | 70 | |
naw | Neisseria arctica | 2,107 | 1,417 | 71 | 70 | |
nmb | Neisseria macacae | 2,514 | 1,506 | 78 | 76 | |
nls | Neisseria lisongii | 1,822 | 1,259 | 78 | 76 | |
nln | Neisseria leonii | 2,023 | 1,365 | 72 | 71 | |
Snodgrassella | ||||||
salv | Snodgrassella alvi | 2,299 | 1,367 | 71 | 70 | |
scom | Snodgrassella communis | 1,987 | 1,277 | 75 | 72 | |
Kingella | ||||||
kki | Kingella kingae | 2,229 | 1,289 | 73 | 69 | |
koa | Kingella oralis | 2,458 | 1,296 | 72 | 69 | |
kpot | Kingella potus | 2,217 | 780 | 75 | 72 | |
Vitreoscilla | ||||||
vff | Vitreoscilla filiformis | 3,557 | 1,983 | 95 | 66 | |
vit | Vitreoscilla sp. C1 | 2,503 | 1,490 | 110 | 109 | |
vst | Vitreoscilla stercoraria | 2,453 | 1,501 | 116 | 114 | |
vms | Vitreoscilla massiliensis | 3,545 | 1,614 | 107 | 104 | |
Eikenella | ||||||
ecor | Eikenella corrodens | 2,089 | 1,241 | 66 | 64 | |
eex | Eikenella exigua | 1,844 | 1,070 | 65 | 64 | |
Simonsiella | ||||||
smur | Simonsiella muelleri | 2,293 | 1,235 | 77 | 76 | |
Alysiella | ||||||
aff | Alysiella filiformis | 2,237 | 1,349 | 83 | 81 | |
acrs | Alysiella crassa | 2,798 | 1,344 | 87 | 85 | |
Conchiformibius | ||||||
cste | Conchiformibius steedae | 2,059 | 1,258 | 74 | 70 | |
ckh | Conchiformibius kuhniae | 2,018 | 1,043 | 75 | 73 | |
Aquella | ||||||
nba | Aquella oligotrophica | 2,468 | 1,367 | 61 | 60 | |
Paralysiella | ||||||
ptes | Paralysiella testudinis | 2,791 | 1,585 | 76 | 70 | |
Morococcus | ||||||
mcer | Morococcus cerebrosus | 2,276 | 1,500 | 76 | 74 | |
Uruburuella | ||||||
usu | Uruburuella suis | 2,391 | 1,604 | 72 | 71 | |
ute | Uruburuella testudinis | 2,598 | 1,610 | 71 | 70 | |
Wielerella | ||||||
wbo | Wielerella bovis | 2,130 | 1,232 | 79 | 77 | |
Crenobacter | ||||||
ccah | Crenobacter cavernae | 2,981 | 1,914 | 105 | 104 | |
Chromobacterium | ||||||
cvi | Chromobacterium violaceum | 4,407 | 2,518 | 122 | 122 | |
cvc | Chromobacterium vaccinii | 4,497 | 2,594 | 129 | 128 | |
chro | Chromobacterium sp. ATCC 53434 | 4,410 | 2,546 | 127 | 126 | |
chri | Chromobacterium phragmitis IIBBL 112-1 | 4,377 | 2,564 | 130 | 128 | |
chrb | Chromobacterium phragmitis IIBBL 274-1 | 4,371 | 2,573 | 130 | 128 | |
crz | Chromobacterium rhizoryzae | 4,595 | 2,757 | 113 | 112 | |
chrm | Chromobacterium paludis | 3,885 | 2,361 | 130 | 128 | |
chae | Chromobacterium haemolyticum | 4,851 | 2,793 | 111 | 110 | |
Pseudogulbenkiania | ||||||
pse | Pseudogulbenkiania sp. NH8B | 4,015 | 2,491 | 112 | 112 | |
Aquitalea | ||||||
amah | Aquitalea magnusonii | 4,423 | 2,586 | 120 | 120 | |
aqs | Aquitalea sp. USM4 | 3,890 | 2,460 | 115 | 115 | |
Vogesella | ||||||
vox | Vogesella sp. XCS3 | 3,570 | 2,132 | 136 | ||
Iodobacter | ||||||
iod | Iodobacter ciconiae | 3,219 | 2,069 | 105 | 103 | |
ifl | Iodobacter fluviatilis | 3,891 | 2,251 | 111 | 110 | |
Jeongeupia | ||||||
jeu | Jeongeupia sp. USM3 | 3,444 | 2,152 | 81 | 79 | |
jes | Jeongeupia sp. HS-3 | 3,190 | 1,904 | 78 | 76 | |
Deefgea | ||||||
dee | Deefgea piscis | 3,067 | 1,954 | 109 | 108 | |
dtk | Deefgea tanakiae | 3,205 | 1,720 | 105 | 103 | |
Chitinibacter | ||||||
chiz | Chitinibacter bivalviorum | 3,345 | 1,967 | 106 | 104 | |
cfon | Chitinibacter fontanus | 3,306 | 1,971 | 104 | 102 | |
Chitiniphilus | ||||||
chic | Chitiniphilus purpureus | 3,746 | 1,782 | 69 | 68 | |
Chitinimonas | ||||||
cari | Chitinimonas arctica | 4,599 | 2,284 | 82 | 79 | |
cks | Chitinimonas koreensis | 4,428 | 1,967 | 70 | 68 | |
Laribacter | ||||||
lhk | Laribacter hongkongensis | 3,238 | 1,841 | 98 | 98 | |
Aquaspirillum | ||||||
aql | Aquaspirillum sp. LM1 | 3,296 | 2,085 | 83 | 82 | |
Microvirgula | ||||||
maer | Microvirgula aerodenitrificans | 3,578 | 2,164 | 84 | 83 | |
Ralstonia | ||||||
rso | Ralstonia pseudosolanacearum GMI1000 | Ref | 5,120 | 2,683 | 74 | 74 |
rse | Ralstonia pseudosolanacearum FQY_4 | 5,139 | 2,676 | 62 | 62 | |
rpu | Ralstonia pseudosolanacearum RS 476 | 5,000 | 2,665 | 73 | 72 | |
rnc | Ralstonia nicotianae | 4,691 | 2,604 | 74 | 72 | |
rsc | Ralstonia solanacearum CFBP2957 | 3,229 | 1,846 | 72 | 65 | |
rsl | Ralstonia solanacearum PSI07 | 5,000 | 2,673 | 78 | 66 | |
rsn | Ralstonia solanacearum Po82 | 5,018 | 2,555 | 62 | 62 | |
rsm | Ralstonia solanacearum CMR15 | 5,024 | 2,570 | 82 | 73 | |
rsy | Ralstonia solanacearum UY031 | 4,679 | 2,615 | 81 | 67 | |
rsg | Ralstonia syzygii subsp. celebesensis | 4,176 | 2,361 | 68 | 66 | |
rpi | Ralstonia pickettii 12J | 4,952 | 2,723 | 68 | 65 | |
rpf | Ralstonia pickettii 12D | 5,361 | 2,750 | 70 | 67 | |
rpj | Ralstonia pickettii DTP0602 | 7,449 | 3,754 | 85 | 85 | |
rmn | Ralstonia mannitolilytica | 4,472 | 2,615 | 58 | 56 | |
rin | Ralstonia insidiosa | 5,819 | 2,948 | 63 | 61 | |
rwe | Ralstonia wenshanensis | 4,800 | 2,660 | 65 | 63 | |
Cupriavidus | ||||||
reh | Cupriavidus necator H16 | Ref | 6,626 | 3,466 | 73 | 73 |
cnc | Cupriavidus necator N-1 | 7,832 | 3,913 | 83 | 83 | |
cuh | Cupriavidus necator NH9 | 7,290 | 3,773 | 87 | 85 | |
reu | Cupriavidus pinatubonensis JMP134 | 6,446 | 3,473 | 87 | 87 | |
rme | Cupriavidus metallidurans | 6,488 | 3,239 | 77 | 77 | |
cti | Cupriavidus taiwanensis | 5,897 | 3,153 | 90 | 81 | |
cbw | Cupriavidus basilensis | 7,661 | 3,731 | 90 | 89 | |
cgd | Cupriavidus gilardii | 4,484 | 2,603 | 71 | 71 | |
ccup | Cupriavidus sp. USMAHM13 | 6,547 | 3,502 | 101 | 99 | |
cup | Cupriavidus malaysiensis | 6,824 | 3,459 | 98 | 96 | |
cuu | Cupriavidus sp. USMAA2-4 | 7,467 | 3,724 | 98 | 96 | |
cpau | Cupriavidus pauculus | 5,452 | 2,901 | 79 | 76 | |
cox | Cupriavidus oxalaticus | 6,925 | 3,649 | 91 | 90 | |
ccam | Cupriavidus campinensis | 5,554 | 2,772 | 79 | 77 | |
ccax | Cupriavidus cauae | 4,877 | 2,729 | 72 | 72 | |
cuk | Cupriavidus sp. KK10 | 7,324 | 3,730 | 85 | 84 | |
cnan | Cupriavidus nantongensis | 6,268 | 3,173 | 76 | 73 | |
cupr | Cupriavidus sp. ISTL7 | 4,097 | 2,282 | 73 | 73 | |
cupe | Cupriavidus sp. EM10 | 5,273 | 2,266 | 80 | 76 | |
cupp | Cupriavidus sp. P-10 | 8,086 | 3,948 | 91 | 86 | |
Burkholderia | ||||||
bma | Burkholderia mallei ATCC 23344 | Ref | 5,025 | 2,756 | 69 | 67 |
bmv | Burkholderia mallei SAVP1 | 5,189 | 2,680 | 66 | 65 | |
bml | Burkholderia mallei NCTC 10229 | 5,157 | 2,727 | 67 | 67 | |
bmn | Burkholderia mallei NCTC 10247 | 5,413 | 2,784 | 71 | 69 | |
bmaz | Burkholderia mallei NCTC 10247 | 4,969 | 2,903 | 65 | 65 | |
bmal | Burkholderia mallei 23344 | 4,845 | 2,826 | 61 | 61 | |
bmae | Burkholderia mallei 6 | 4,822 | 2,833 | 66 | 66 | |
bmaq | Burkholderia mallei BMQ | 4,850 | 2,831 | 61 | 61 | |
bmai | Burkholderia mallei 2000031063 | 4,957 | 2,845 | 64 | 64 | |
bmaf | Burkholderia mallei FMH 23344 | 4,995 | 2,906 | 66 | 66 | |
bmab | Burkholderia mallei 2002734299 | 4,902 | 2,865 | 66 | 66 | |
bps | Burkholderia pseudomallei K96243 | Ref | 5,728 | 3,150 | 81 | 75 |
bpm | Burkholderia pseudomallei 1710b | 6,347 | 3,125 | 73 | 72 | |
bpl | Burkholderia pseudomallei 1106a | 7,181 | 3,153 | 72 | 72 | |
bpd | Burkholderia pseudomallei 668 | 7,117 | 3,180 | 71 | 71 | |
bpr | Burkholderia pseudomallei MSHR346 | 4,202 | 2,088 | 65 | 63 | |
bpse | Burkholderia pseudomallei MSHR305 | 6,105 | 3,293 | 71 | 71 | |
bpsm | Burkholderia pseudomallei MSHR511 | 5,964 | 3,249 | 71 | 71 | |
bpsu | Burkholderia pseudomallei MSHR146 | 5,963 | 3,246 | 71 | 71 | |
bpsd | Burkholderia pseudomallei MSHR520 | 6,113 | 3,280 | 71 | 71 | |
bpz | Burkholderia pseudomallei 1026b | 6,070 | 3,163 | 71 | 71 | |
bpq | Burkholderia pseudomallei BPC006 | 7,159 | 3,137 | 71 | 71 | |
bpk | Burkholderia pseudomallei NCTC 13179 | 6,085 | 3,256 | 72 | 72 | |
bpsh | Burkholderia pseudomallei HBPUB10134a | 5,846 | 3,177 | 71 | 71 | |
bpsa | Burkholderia pseudomallei NAU35A-3 | 5,844 | 3,198 | 71 | 70 | |
bpso | Burkholderia pseudomallei A79A | 5,961 | 3,185 | 71 | 71 | |
but | Burkholderia pseudomallei TSV202 | 6,531 | 3,349 | 71 | 71 | |
bte | Burkholderia thailandensis E264 | 5,634 | 3,156 | 72 | 70 | |
btq | Burkholderia thailandensis 2002721723 | 5,533 | 3,068 | 70 | 69 | |
btj | Burkholderia thailandensis E444 | 5,571 | 3,093 | 70 | 69 | |
btz | Burkholderia thailandensis H0587 | 5,629 | 3,159 | 70 | 70 | |
btd | Burkholderia thailandensis MSMB121 | 5,758 | 3,163 | 68 | 68 | |
btv | Burkholderia thailandensis MSMB59 | 5,709 | 3,145 | 69 | 69 | |
bthe | Burkholderia thailandensis E254 | 5,591 | 3,117 | 70 | 70 | |
bthm | Burkholderia thailandensis USAMRU Malaysia #20 | 5,620 | 3,116 | 70 | 69 | |
btha | Burkholderia thailandensis 2003015869 | 5,757 | 3,172 | 73 | 73 | |
bthl | Burkholderia thailandensis 2002721643 | 5,626 | 3,147 | 70 | 69 | |
bok | Burkholderia oklahomensis EO147 | 6,264 | 3,373 | 69 | 69 | |
boc | Burkholderia oklahomensis C6786 | 6,071 | 3,340 | 70 | 70 | |
buu | Burkholderia mayonis | 5,485 | 3,009 | 71 | 71 | |
bsav | Burkholderia savannae | 6,018 | 3,203 | 71 | 71 | |
bhg | Burkholderia humptydooensis FDAARGOS_899 | 6,205 | 3,337 | 73 | 71 | |
bud | Burkholderia humptydooensis MSMB43 | 6,165 | 3,343 | 73 | 72 | |
bvi | Burkholderia vietnamiensis G4 | 7,617 | 3,642 | 88 | 88 | |
bve | Burkholderia vietnamiensis LMG 10929 | 6,100 | 3,308 | 87 | 84 | |
bur | Burkholderia lata | 7,717 | 3,949 | 88 | 87 | |
bcm | Burkholderia orbicola | 7,008 | 3,791 | 89 | 87 | |
bch | Burkholderia cenocepacia HI2424 | 6,919 | 3,659 | 86 | 85 | |
bcj | Burkholderia cenocepacia J2315 | 7,121 | 3,787 | 113 | 94 | |
bcen | Burkholderia cenocepacia DDS 22E-1 | 7,066 | 3,863 | 87 | 86 | |
bcew | Burkholderia cenocepacia DWS 37E-2 | 5,763 | 3,243 | 84 | 83 | |
bceo | Burkholderia cenocepacia H111 | 6,932 | 3,692 | 84 | 83 | |
bam | Burkholderia ambifaria AMMD | 6,610 | 3,568 | 90 | 89 | |
bac | Burkholderia ambifaria MC40-6 | 6,697 | 3,609 | 90 | 88 | |
bmj | Burkholderia multivorans ATCC 17616 (Tohoku) | 6,112 | 3,414 | 81 | 81 | |
bmu | Burkholderia multivorans ATCC 17616 (JGI) | 6,259 | 3,423 | 83 | 83 | |
bmk | Burkholderia multivorans DDS 15A-1 | 6,501 | 3,558 | 80 | 80 | |
bmul | Burkholderia multivorans ATCC BAA-247 | 5,589 | 3,198 | 81 | 81 | |
bct | Burkholderia cepacia GG4 | 5,825 | 3,237 | 66 | 65 | |
bced | Burkholderia cepacia DDS 7H-2 | 7,323 | 3,837 | 84 | 83 | |
bcep | Burkholderia cepacia ATCC 25416 | 7,490 | 3,863 | 88 | 87 | |
bdl | Burkholderia dolosa | 5,633 | 3,139 | 83 | 83 | |
bpyr | Burkholderia pyrrocinia | 6,802 | 3,688 | 86 | 86 | |
bcon | Burkholderia contaminans | 7,266 | 3,866 | 85 | 84 | |
bub | Burkholderia ubonensis | 6,251 | 3,409 | 89 | 88 | |
bdf | Burkholderia diffusa | 5,980 | 3,396 | 85 | 85 | |
blat | Burkholderia latens | 5,761 | 3,218 | 83 | 83 | |
btei | Burkholderia territorii | 5,945 | 3,374 | 85 | 85 | |
bsem | Burkholderia seminalis | 6,675 | 3,696 | 86 | 85 | |
bpsl | Burkholderia pseudomultivorans | 6,872 | 3,791 | 90 | 88 | |
bmec | Burkholderia metallica | 6,376 | 3,525 | 87 | 86 | |
bstg | Burkholderia stagnalis | 6,414 | 3,550 | 89 | 88 | |
bstl | Burkholderia stabilis | 7,425 | 3,896 | 89 | 87 | |
bann | Burkholderia anthina | 5,759 | 3,193 | 85 | 83 | |
bari | Burkholderia arboris | 7,667 | 3,836 | 91 | 88 | |
baen | Burkholderia aenigmatica | 8,409 | 3,994 | 93 | 89 | |
bser | Burkholderia semiarida | 6,639 | 3,542 | 94 | 91 | |
bgl | Burkholderia glumae BGR1 | 5,772 | 3,185 | 81 | 81 | |
bgu | Burkholderia glumae LMG 2196 = ATCC 33617 | 5,838 | 3,136 | 80 | 80 | |
bug | Burkholderia sp. CCGE1001 | 6,453 | 3,417 | 84 | 83 | |
bgf | Burkholderia sp. CCGE1003 | 5,988 | 3,316 | 85 | 84 | |
bgd | Burkholderia gladioli BSR3 | 7,410 | 3,870 | 83 | 82 | |
bgo | Burkholderia gladioli ATCC 10248 | 7,540 | 3,866 | 82 | 81 | |
byi | Burkholderia sp. YI23 | 7,804 | 4,188 | 82 | 82 | |
buk | Burkholderia sp. KJ006 | 6,024 | 3,143 | 83 | 83 | |
bul | Burkholderia sp. 2002721687 | 6,284 | 3,374 | 70 | 69 | |
buq | Burkholderia sp. HB1 | 6,224 | 3,478 | 83 | 82 | |
bgp | Burkholderia plantarii PG1 | 6,455 | 3,475 | 81 | 81 | |
bpla | Burkholderia plantarii ATCC 43733 | 6,457 | 3,559 | 77 | 77 | |
bum | Burkholderia sp. PAMC 26561 | 7,753 | 3,890 | 72 | 71 | |
bui | Burkholderia sp. PAMC 28687 | 6,078 | 3,237 | 66 | 65 | |
burk | Burkholderia sp. JP2-270 | 7,599 | 4,012 | 89 | 87 | |
burt | Burkholderia sp. THE68 | 7,278 | 3,786 | 85 | 81 | |
burm | Burkholderia sp. MS389 | 6,756 | 3,670 | 90 | 88 | |
Paraburkholderia | ||||||
bxe | Paraburkholderia xenovorans LB400 | Ref | 8,702 | 4,306 | 86 | 86 |
bxb | Paraburkholderia xenovorans LB400 | 8,631 | 4,395 | 82 | 82 | |
bph | Paraburkholderia phymatum | 7,496 | 3,904 | 81 | 81 | |
bge | Paraburkholderia atlantica CCGE1002 | 6,889 | 3,562 | 98 | 96 | |
bpx | Paraburkholderia phenoliruptrix | 6,496 | 3,560 | 80 | 80 | |
bpy | Paraburkholderia phytofirmans PsJN | 7,241 | 3,782 | 82 | 80 | |
buz | Paraburkholderia phytofirmans OLGA172 | 7,223 | 3,566 | 90 | 88 | |
bfn | Paraburkholderia fungorum | 8,174 | 4,096 | 81 | 81 | |
bcai | Paraburkholderia caribensis | 9,056 | 4,375 | 80 | 79 | |
pspw | Paraburkholderia sprentiae | 6,728 | 3,503 | 94 | 91 | |
para | Paraburkholderia sp. SOS3 | 6,452 | 3,403 | 75 | 72 | |
parb | Paraburkholderia aromaticivorans | 7,755 | 4,057 | 85 | 84 | |
phs | Paraburkholderia hospita | 10,009 | 4,835 | 93 | 91 | |
pter | Paraburkholderia terrae | 8,752 | 4,442 | 83 | 81 | |
pgp | Paraburkholderia graminis | 6,520 | 3,542 | 84 | 83 | |
pcj | Paraburkholderia caledonica | 6,091 | 3,253 | 84 | 83 | |
pts | Paraburkholderia terricola | 6,110 | 3,312 | 80 | 78 | |
pcaf | Paraburkholderia caffeinilytica | 5,438 | 3,016 | 81 | 81 | |
pmeg | Paraburkholderia megapolitana | 6,467 | 3,412 | 73 | 70 | |
ptro | Paraburkholderia tropica | 7,516 | 3,995 | 93 | 91 | |
pgis | Paraburkholderia ginsengisoli | 5,673 | 3,141 | 91 | 88 | |
pacp | Paraburkholderia acidiphila | 6,838 | 3,681 | 95 | 93 | |
pacs | Paraburkholderia acidisoli | 6,852 | 3,634 | 92 | 87 | |
pew | Paraburkholderia edwinii | 7,046 | 3,628 | 74 | 72 | |
pdio | Paraburkholderia dioscoreae | 8,183 | 3,744 | 130 | 76 | |
pbry | Paraburkholderia bryophila | 7,051 | 3,431 | 89 | 66 | |
psaa | Paraburkholderia sabiae | 8,598 | 4,256 | 86 | 63 | |
pkf | Paraburkholderia kirstenboschensis | 7,576 | 3,735 | 85 | 84 | |
pbon | Paraburkholderia bonniea | 3,316 | 1,997 | 72 | 71 | |
ppai | Paraburkholderia pallida | 8,778 | 4,274 | 98 | 49 | |
phun | Paraburkholderia kururiensis | 5,839 | 3,213 | 73 | 39 | |
plad | Paraburkholderia largidicola | 8,498 | 4,141 | 84 | 43 | |
pazz | Paraburkholderia sp. 22B1P | 8,702 | 4,268 | 82 | 27 | |
Mycetohabitans | ||||||
brh | Mycetohabitans rhizoxinica | 3,870 | 1,738 | 55 | 55 | |
Polynucleobacter | ||||||
pnu | Polynucleobacter asymbioticus | 2,077 | 1,394 | 44 | 44 | |
pne | Polynucleobacter necessarius | 1,508 | 991 | 44 | 43 | |
pdq | Polynucleobacter duraquae | 2,059 | 1,398 | 45 | 44 | |
poh | Polynucleobacter paneuropaeus | 1,583 | 1,162 | 46 | 45 | |
ptrp | Polynucleobacter tropicus | 2,020 | 1,278 | 44 | 43 | |
pani | Polynucleobacter antarcticus | 2,137 | 1,288 | 47 | 46 | |
ppal | Polynucleobacter paludilacus | 1,703 | 1,158 | 47 | 45 | |
pcos | Polynucleobacter corsicus | 2,035 | 1,290 | 45 | 44 | |
pyt | Polynucleobacter yangtzensis | 1,915 | 1,249 | 43 | 42 | |
piu | Polynucleobacter ibericus | 1,889 | 1,283 | 44 | 43 | |
pwu | Polynucleobacter wuianus | 2,226 | 1,452 | 47 | 45 | |
pard | Polynucleobacter arcticus | 2,050 | 1,327 | 45 | 43 | |
poly | Polynucleobacter sp. SHI2 | 2,446 | 1,513 | 41 | 41 | |
poln | Polynucleobacter sp. SHI8 | 2,448 | 1,513 | 41 | 41 | |
polk | Polynucleobacter sp. KF022 | 1,862 | 1,264 | 40 | 40 | |
polt | Polynucleobacter sp. TUM22923 | 1,848 | 1,292 | 44 | 44 | |
Pandoraea | ||||||
ppk | Pandoraea pnomenusa 3kgm | 4,251 | 2,586 | 79 | 79 | |
ppno | Pandoraea pnomenusa RB38 | 4,562 | 2,759 | 83 | 82 | |
ppnm | Pandoraea pnomenusa DSM 16536 | 4,586 | 2,717 | 78 | 78 | |
prb | Pandoraea pnomenusa | 4,646 | 2,757 | 81 | 80 | |
ppul | Pandoraea pulmonicola | 4,868 | 2,816 | 91 | 90 | |
pspu | Pandoraea sputorum | 4,884 | 2,865 | 81 | 80 | |
papi | Pandoraea apista | 4,676 | 2,771 | 74 | 74 | |
pve | Pandoraea vervacti | 4,811 | 2,874 | 81 | 80 | |
pox | Pandoraea oxalativorans | 5,400 | 3,070 | 84 | 81 | |
ptx | Pandoraea thiooxydans | 3,999 | 2,462 | 59 | 58 | |
pfg | Pandoraea faecigallinarum | 4,858 | 2,753 | 82 | 81 | |
pnr | Pandoraea norimbergensis | 5,237 | 2,932 | 81 | 80 | |
pand | Pandoraea sp. XY-2 | 4,038 | 2,450 | 81 | 80 | |
pfib | Pandoraea fibrosis | 4,801 | 2,855 | 81 | 80 | |
pcom | Pandoraea commovens | 5,214 | 2,887 | 82 | 79 | |
pann | Pandoraea sp. NE5 | 4,524 | 2,690 | 79 | 77 | |
panx | Pandoraea sp. XJJ-1 | 4,822 | 2,756 | 81 | 80 | |
Paucimonas | ||||||
plg | Paucimonas lemoignei | 5,150 | 3,014 | 80 | 80 | |
Ephemeroptericola | ||||||
hyf | Ephemeroptericola cinctiostellae | 2,490 | 1,505 | 62 | 62 | |
Lautropia | ||||||
lmir | Lautropia mirabilis | 2,524 | 1,679 | 69 | 66 | |
Mycoavidus | ||||||
mcys | Mycoavidus cysteinexigens | 2,317 | 1,265 | 47 | 47 | |
myco | Mycoavidus sp. B2-EB | 1,627 | 1,116 | 49 | 49 | |
Caballeronia | ||||||
caba | Caballeronia sp. SBC2 | 8,520 | 4,128 | 71 | 69 | |
buo | Caballeronia insecticola | 6,732 | 3,457 | 76 | 76 | |
cabk | Caballeronia sp. NK8 | 8,545 | 4,063 | 85 | 84 | |
bue | Caballeronia cordobensis | 8,112 | 4,133 | 82 | 82 | |
Limnobacter | ||||||
limn | Limnobacter profundi | 3,027 | 1,839 | 49 | 48 | |
lto | Limnobacter thiooxidans | 3,192 | 1,783 | 48 | 46 | |
Vallotia | ||||||
vtr | Candidatus Vallotia tarda | 780 | 654 | 50 | 50 | |
vla | Candidatus Vallotia lariciata | 734 | 609 | 53 | ||
vcv | Candidatus Vallotia cooleyia | 850 | 681 | 53 | 53 | |
Trinickia | ||||||
tvl | Trinickia violacea | 7,456 | 3,778 | 72 | 71 | |
tcar | Trinickia caryophylli | 5,682 | 3,158 | 73 | 72 | |
Bordetella | ||||||
bpe | Bordetella pertussis Tohama I | Ref | 3,447 | 2,064 | 62 | 62 |
bpc | Bordetella pertussis CS | 3,456 | 2,113 | 60 | 60 | |
bper | Bordetella pertussis 18323 | 3,377 | 2,080 | 62 | 62 | |
bpet | Bordetella pertussis B1917 | 3,458 | 2,091 | 60 | 60 | |
bpeu | Bordetella pertussis 137 | 3,462 | 2,097 | 62 | 62 | |
bpar | Bordetella parapertussis Bpp5 | 4,184 | 2,526 | 65 | 62 | |
bpa | Bordetella parapertussis 12822 | 4,185 | 2,588 | 65 | 65 | |
bbh | Bordetella bronchiseptica 253 | 4,781 | 2,860 | 65 | 64 | |
bbr | Bordetella bronchiseptica RB50 | 4,994 | 2,870 | 66 | 66 | |
bbm | Bordetella bronchiseptica MO149 | 4,622 | 2,836 | 64 | 64 | |
bbx | Bordetella bronchiseptica S798 | 4,791 | 2,879 | 63 | 63 | |
bpt | Bordetella petrii | 5,031 | 2,897 | 60 | 60 | |
bav | Bordetella avium | 3,381 | 2,163 | 69 | 69 | |
bho | Bordetella holmesii ATCC 51541 | 3,912 | 2,268 | 63 | 63 | |
bhm | Bordetella holmesii 44057 | 3,883 | 2,263 | 65 | 65 | |
bhz | Bordetella hinzii | 4,559 | 2,748 | 74 | 71 | |
btrm | Bordetella trematum | 4,120 | 2,426 | 85 | 83 | |
bbro | Bordetella bronchialis | 5,030 | 2,906 | 62 | 61 | |
bfz | Bordetella flabilis | 5,194 | 2,979 | 61 | 60 | |
bpdz | Bordetella pseudohinzii | 4,130 | 2,600 | 73 | 70 | |
boh | Bordetella sp. H567 | 4,630 | 2,703 | 59 | 59 | |
bgm | Bordetella genomosp. 13 | 4,734 | 2,773 | 66 | 65 | |
boj | Bordetella sp. J329 | 3,380 | 2,145 | 66 | 65 | |
bgv | Bordetella genomosp. 8 | 5,426 | 3,024 | 62 | 61 | |
Achromobacter | ||||||
axy | Achromobacter xylosoxidans A8 | 6,815 | 3,688 | 71 | 71 | |
axo | Achromobacter xylosoxidans NH44784-1996 | 6,388 | 3,420 | 58 | 58 | |
axn | Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 | 6,065 | 3,369 | 65 | 65 | |
axx | Achromobacter xylosoxidans NCTC10807 | 6,126 | 3,438 | 66 | 57 | |
adt | Achromobacter denitrificans | 5,468 | 3,194 | 71 | 70 | |
ais | Achromobacter insolitus | 5,633 | 3,248 | 74 | 73 | |
asw | Achromobacter spanius | 5,645 | 3,222 | 70 | 68 | |
achr | Achromobacter sp. AONIH1 | 5,897 | 3,291 | 71 | 69 | |
achb | Achromobacter sp. B7 | 5,472 | 3,151 | 74 | 73 | |
ady | Achromobacter deleyi | 5,779 | 3,249 | 79 | 77 | |
acho | Achromobacter sp. 77 | 5,309 | 2,934 | 73 | 72 | |
amui | Achromobacter mucicolens | 5,338 | 2,986 | 68 | 67 | |
apes | Achromobacter pestifer | 6,529 | 3,620 | 75 | 74 | |
aaeg | Achromobacter aegrifaciens | 6,358 | 3,472 | 76 | 75 | |
asel | Achromobacter seleniivolatilans | 6,095 | 3,362 | 75 | 74 | |
achm | Achromobacter sp. E1 | 5,427 | 3,012 | 73 | 72 | |
acha | Achromobacter sp. ES-001 | 5,766 | 3,202 | 74 | 73 | |
avh | Achromobacter veterisilvae | 5,991 | 3,425 | 77 | 75 | |
achh | Achromobacter sp. HNDS-1 | 5,740 | 3,190 | 72 | 24 | |
Taylorella | ||||||
teq | Taylorella equigenitalis MCE9 | 1,556 | 1,111 | 47 | 47 | |
tea | Taylorella equigenitalis ATCC 35865 | 1,542 | 1,108 | 47 | 47 | |
teg | Taylorella equigenitalis 14/56 | 1,475 | 1,105 | 33 | 33 | |
tas | Taylorella asinigenitalis MCE3 | 1,524 | 1,075 | 47 | 47 | |
tat | Taylorella asinigenitalis 14/45 | 1,415 | 1,067 | 29 | 29 | |
Pusillimonas | ||||||
put | Pusillimonas sp. T7-7 | 3,773 | 2,292 | 53 | 51 | |
pud | Pusillimonas sp. DMV24BSW_D | 2,953 | 2,028 | 57 | 56 | |
Pollutimonas | ||||||
pus | Pollutimonas thiosulfatoxidans | 3,285 | 2,230 | 54 | 53 | |
poll | Pollutimonas sp. M17 | 3,524 | 2,231 | 56 | 55 | |
Advenella | ||||||
aka | Advenella kashmirensis | 3,933 | 2,007 | 47 | 45 | |
amim | Advenella mimigardefordensis | 4,084 | 2,510 | 45 | 45 | |
aaln | Advenella alkanexedens | 2,786 | 1,838 | 68 | 64 | |
Castellaniella | ||||||
cdn | Castellaniella defragrans | 3,616 | 2,276 | 51 | 51 | |
Basilea | ||||||
bpsi | Basilea psittacipulmonis | 1,454 | 1,099 | 49 | 49 | |
Alcaligenes | ||||||
afa | Alcaligenes faecalis ZD02 | 3,752 | 2,427 | 67 | 67 | |
afq | Alcaligenes faecalis JQ135 | 3,617 | 2,330 | 71 | 70 | |
aaqu | Alcaligenes aquatilis | 3,826 | 2,384 | 71 | 70 | |
aamm | Alcaligenes ammonioxydans | 3,320 | 2,156 | 70 | 69 | |
alcn | Alcaligenes sp. NLF5-7 | 4,015 | 2,407 | 70 | 69 | |
Paenalcaligenes | ||||||
phn | Paenalcaligenes hominis | 2,089 | 1,345 | 61 | 59 | |
Orrella | ||||||
odi | Orrella dioscoreae | 4,361 | 2,666 | 55 | 54 | |
boz | Orrella marina | 3,581 | 2,044 | 57 | 56 | |
odh | Orrella daihaiensis | 2,527 | 1,679 | 52 | 51 | |
Oligella | ||||||
our | Oligella urethralis | 2,240 | 1,578 | 55 | 54 | |
oue | Oligella ureolytica | 2,558 | 1,781 | 56 | 55 | |
Pigmentiphaga | ||||||
pig | Pigmentiphaga sp. H8 | 5,548 | 2,965 | 62 | 61 | |
pacr | Pigmentiphaga aceris | 5,193 | 3,061 | 70 | 67 | |
Kerstersia | ||||||
kgy | Kerstersia gyiorum | 3,296 | 2,136 | 65 | 64 | |
Paralcaligenes | ||||||
park | Paralcaligenes sp. KSB-10 | 3,998 | 2,456 | 54 | 53 | |
Neopusillimonas | ||||||
narm | Neopusillimonas aromaticivorans | 2,613 | 1,131 | 55 | 54 | |
Rhodoferax | ||||||
rfr | Rhodoferax ferrireducens | 4,418 | 2,621 | 60 | 53 | |
rsb | Rhodoferax saidenbachensis | 3,936 | 2,331 | 56 | 52 | |
rac | Rhodoferax antarcticus | 3,685 | 2,130 | 59 | 59 | |
rhy | Rhodoferax koreensis | 5,290 | 2,983 | 59 | 59 | |
rhf | Rhodoferax sediminis CHu59-6-5 | 4,058 | 2,428 | 49 | 49 | |
rhg | Rhodoferax aquaticus | 4,240 | 2,433 | 67 | 67 | |
rhoa | Rhodoferax sp. AJA081-3 | 4,668 | 2,162 | 55 | 53 | |
rhob | Rhodoferax sp. BAB1 | 3,598 | 2,074 | 58 | 56 | |
rmk | Rhodoferax mekongensis | 3,606 | 2,154 | 66 | 64 | |
rlh | Rhodoferax lithotrophicus | 4,757 | 2,525 | 64 | 64 | |
rhof | Rhodoferax sp. WC2427 | 4,362 | 2,545 | 58 | 57 | |
Polaromonas | ||||||
pol | Polaromonas sp. JS666 | 5,453 | 2,920 | 51 | 49 | |
pna | Polaromonas naphthalenivorans | 4,929 | 2,653 | 60 | 60 | |
pos | Polaromonas sp. SP1 | 4,099 | 2,329 | 49 | 48 | |
poo | Polaromonas sp. Pch-P | 4,027 | 2,271 | 50 | 49 | |
pvac | Polaromonas vacuolata | 3,461 | 2,150 | 75 | 74 | |
Acidovorax | ||||||
ajs | Acidovorax sp. JS42 | 4,155 | 2,360 | 63 | 63 | |
ack | Acidovorax sp. KKS102 | 4,742 | 2,663 | 59 | 58 | |
acra | Acidovorax sp. RAC01 | 4,100 | 2,307 | 62 | 62 | |
acid | Acidovorax carolinensis NA2 | 3,642 | 2,274 | 68 | 68 | |
acip | Acidovorax carolinensis P4 | 4,178 | 2,432 | 70 | 70 | |
acin | Acidovorax carolinensis NA3 | 3,434 | 2,120 | 69 | 69 | |
acis | Acidovorax carolinensis P3 | 3,662 | 2,138 | 70 | 70 | |
acio | Acidovorax sp. 1608163 | 4,168 | 2,459 | 70 | 69 | |
arad | Acidovorax radicis | 4,400 | 2,521 | 71 | 70 | |
atem | Acidovorax temperans | 4,236 | 2,376 | 65 | 65 | |
aciq | Acidovorax sp. DW039 | 4,610 | 2,557 | 66 | 66 | |
aciv | Acidovorax sp. JMULE5 | 4,759 | 2,610 | 71 | 70 | |
asah | Acidovorax sacchari | 4,908 | 2,721 | 64 | 1 | |
Paracidovorax | ||||||
aav | Paracidovorax citrulli | 4,709 | 2,508 | 65 | 65 | |
aaa | Paracidovorax avenae | 4,737 | 2,697 | 65 | 64 | |
Paenacidovorax | ||||||
amon | Paenacidovorax monticola | 3,751 | 2,159 | 65 | 65 | |
Verminephrobacter | ||||||
vei | Verminephrobacter eiseniae | 4,947 | 2,849 | 59 | 59 | |
Delftia | ||||||
dac | Delftia acidovorans | 6,040 | 3,169 | 98 | 97 | |
del | Delftia sp. Cs1-4 | 5,861 | 3,209 | 98 | 97 | |
dts | Delftia tsuruhatensis | 6,326 | 3,234 | 100 | 100 | |
dhk | Delftia sp. HK171 | 5,468 | 3,087 | 99 | 98 | |
dla | Delftia lacustris | 6,562 | 3,386 | 97 | 97 | |
Variovorax | ||||||
vap | Variovorax paradoxus S110 | 6,279 | 3,447 | 71 | 71 | |
vpe | Variovorax paradoxus EPS | 5,952 | 3,243 | 67 | 65 | |
vpd | Variovorax paradoxus B4 | 6,753 | 3,647 | 54 | 54 | |
vaa | Variovorax sp. PAMC 28711 | 3,975 | 2,363 | 55 | 55 | |
vbo | Variovorax boronicumulans | 6,236 | 3,249 | 60 | 60 | |
vam | Variovorax sp. PMC12 | 6,380 | 3,425 | 68 | 67 | |
vaz | Variovorax sp. PAMC26660 | 6,792 | 3,407 | 61 | 60 | |
vav | Variovorax sp. 38R | 6,265 | 3,273 | 60 | 60 | |
vae | Variovorax sp. EBFNA2 | 6,834 | 3,518 | 61 | 61 | |
vax | Variovorax sp. PAMC28562 | 4,294 | 2,583 | 56 | 55 | |
Comamonas | ||||||
ctt | Comamonas thiooxydans | 4,802 | 2,688 | 88 | 88 | |
ctes | Comamonas testosteroni TK102 | 5,544 | 2,877 | 123 | 123 | |
cke | Comamonas kerstersii | 3,155 | 1,996 | 120 | 120 | |
cser | Comamonas serinivorans | 3,707 | 2,039 | 75 | 74 | |
cof | Comamonas flocculans | 3,079 | 2,023 | 61 | 61 | |
caqt | Comamonas aquatica | 3,507 | 2,088 | 129 | 128 | |
codo | Comamonas odontotermitis | 4,292 | 2,319 | 102 | 99 | |
ctez | Comamonas terrigena | 4,158 | 2,319 | 112 | 62 | |
aant | Comamonas antarctica | 4,449 | 2,618 | 114 | 114 | |
crj | Comamonas resistens | 4,775 | 2,623 | 127 | 82 | |
cenp | Comamonas endophytica | 3,931 | 2,355 | 104 | 62 | |
comb | Comamonas sp. B21-038 | 4,554 | 2,481 | 106 | 78 | |
csqu | Comamonas squillarum | 4,494 | 2,460 | 106 | 5 | |
Alicycliphilus | ||||||
adn | Alicycliphilus denitrificans BC | 4,542 | 2,544 | 66 | 65 | |
adk | Alicycliphilus denitrificans K601 | 4,696 | 2,681 | 67 | 66 | |
Ramlibacter | ||||||
rta | Ramlibacter tataouinensis | 3,881 | 2,186 | 46 | 46 | |
rtea | Ramlibacter terrae | 2,807 | 794 | 54 | 54 | |
Symbiobacter | ||||||
cbx | Candidatus Symbiobacter mobilis | 2,626 | 1,402 | 50 | 50 | |
Ottowia | ||||||
oto | Ottowia sp. oral taxon 894 | 2,284 | 1,372 | 60 | 59 | |
otk | Ottowia oryzae | 3,435 | 2,044 | 64 | 59 | |
otd | Ottowia testudinis | 3,955 | 2,116 | 63 | 57 | |
Limnohabitans | ||||||
lim | Limnohabitans sp. 103DPR2 | 2,805 | 1,857 | 46 | 46 | |
lih | Limnohabitans sp. 63ED37-2 | 3,180 | 1,999 | 55 | 55 | |
limi | Limnohabitans sp. INBF002 | 2,554 | 1,674 | 50 | 49 | |
Hydrogenophaga | ||||||
hyr | Hydrogenophaga sp. RAC07 | 4,366 | 2,584 | 49 | 49 | |
hyb | Hydrogenophaga sp. PBC | 4,907 | 2,718 | 49 | 48 | |
hyl | Hydrogenophaga crassostreae | 4,459 | 2,570 | 54 | 54 | |
hyc | Hydrogenophaga sp. PAMC20947 | 4,310 | 2,542 | 56 | 55 | |
hpse | Hydrogenophaga pseudoflava | 4,625 | 2,734 | 61 | 55 | |
hyn | Hydrogenophaga sp. BPS33 | 6,126 | 3,131 | 55 | 54 | |
htn | Hydrogenophaga taeniospiralis | 5,246 | 2,884 | 68 | 67 | |
hcz | Hydrogenophaga crocea | 4,265 | 2,313 | 53 | 53 | |
hyy | Hydrogenophaga sp. YM1 | 4,365 | 2,493 | 55 | 54 | |
hydr | Hydrogenophaga sp. SNF1 | 4,406 | 2,505 | 54 | 53 | |
hyda | Hydrogenophaga sp. ANAO-22 | 5,681 | 3,002 | 50 | 49 | |
Diaphorobacter | ||||||
dpy | Diaphorobacter nitroreducens | 3,589 | 2,180 | 65 | 65 | |
dih | Diaphorobacter sp. HDW4A | 5,959 | 3,198 | 79 | 79 | |
daer | Diaphorobacter aerolatus | 3,621 | 1,906 | 78 | 78 | |
drg | Diaphorobacter ruginosibacter | 4,485 | 2,619 | 85 | 84 | |
dls | Diaphorobacter limosus | 3,744 | 2,210 | 66 | 65 | |
dij | Diaphorobacter sp. JS3050 | 3,589 | 2,095 | 65 | 64 | |
dim | Diaphorobacter sp. MNS-0 | 3,589 | 2,197 | 63 | 63 | |
dia | Acidovorax ebreus | 3,479 | 2,192 | 69 | 68 | |
Simplicispira | ||||||
simp | Simplicispira suum | 3,692 | 2,301 | 64 | 64 | |
Pulveribacter | ||||||
melm | Pulveribacter suum | 2,970 | 2,008 | 66 | 66 | |
Melaminivora | ||||||
mela | Melaminivora suipulveris | 3,401 | 2,132 | 69 | 69 | |
mje | Melaminivora jejuensis | 3,217 | 2,032 | 66 | 66 | |
Serpentinimonas | ||||||
cbaa | Serpentinimonas raichei | 2,374 | 1,689 | 50 | 50 | |
cbab | Serpentinimonas maccroryi | 2,412 | 1,629 | 50 | 49 | |
Hylemonella | ||||||
hgr | Hylemonella gracilis | 3,314 | 2,027 | 58 | 57 | |
Caldimonas | ||||||
sthm | Caldimonas thermodepolymerans | 3,556 | 2,242 | 61 | 59 | |
pbh | Caldimonas brevitalea | 5,557 | 2,784 | 76 | 75 | |
saqa | Caldimonas aquatica | 2,976 | 1,797 | 56 | 55 | |
Methylibium | ||||||
mpt | Methylibium petroleiphilum | 4,449 | 2,472 | 69 | 68 | |
metp | Methylibium sp. Pch-M | 3,663 | 2,287 | 72 | 63 | |
Rubrivivax | ||||||
rge | Rubrivivax gelatinosus | 4,694 | 2,738 | 62 | 62 | |
rbn | Rubrivivax benzoatilyticus | 3,898 | 2,341 | 49 | 49 | |
Roseateles | ||||||
rdp | Roseateles depolymerans | 4,773 | 2,559 | 71 | 70 | |
roi | Roseateles amylovorans | 5,026 | 2,318 | 82 | 81 | |
kia | Roseateles sp. DAIF2 | 5,398 | 2,805 | 83 | 82 | |
pkt | Paucibacter sp. KCTC 42545 | 4,254 | 2,415 | 84 | 84 | |
paqa | Kinneretia aquatilis | 4,569 | 2,396 | 76 | 72 | |
pais | Paucibacter sediminis | 4,827 | 2,607 | 80 | 77 | |
miu | Mitsuaria sp. 7 | 4,778 | 2,312 | 63 | 62 | |
Sphaerotilus | ||||||
snn | Sphaerotilus sulfidivorans | 3,840 | 2,320 | 82 | 82 | |
smio | Sphaerotilus microaerophilus | 5,236 | 2,735 | 75 | 65 | |
Ideonella | ||||||
idc | Ideonella dechloratans | 4,127 | 2,361 | 73 | 72 | |
Aquincola | ||||||
ater | Aquincola tertiaricarbonis | 6,389 | 3,318 | 64 | 64 | |
Leptothrix | ||||||
lch | Leptothrix cholodnii | 4,363 | 2,680 | 60 | 59 | |
Piscinibacter | ||||||
rgu | Piscinibacter gummiphilus | 5,687 | 3,026 | 71 | 70 | |
Herminiimonas | ||||||
har | Herminiimonas arsenicoxydans | 3,283 | 1,974 | 58 | 53 | |
Janthinobacterium | ||||||
mms | Janthinobacterium sp. Marseille | 3,697 | 2,182 | 53 | 53 | |
jag | Janthinobacterium agaricidamnosum | 5,493 | 2,753 | 80 | 80 | |
jab | Janthinobacterium sp. B9-8 | 4,083 | 2,390 | 116 | 115 | |
jaz | Janthinobacterium sp. 1_2014MBL_MicDiv | 5,277 | 2,933 | 120 | 119 | |
jal | Janthinobacterium sp. LM6 | 5,349 | 2,958 | 122 | 120 | |
jsv | Janthinobacterium svalbardensis | 5,360 | 2,891 | 121 | 120 | |
jaj | Janthinobacterium sp. 17J80-10 | 3,501 | 2,096 | 64 | 63 | |
jas | Janthinobacterium tructae | 5,403 | 2,979 | 122 | 121 | |
jlv | Janthinobacterium lividum | 5,518 | 3,027 | 122 | 120 | |
jah | Janthinobacterium sp. HH102 | 5,851 | 2,968 | 122 | 117 | |
jri | Janthinobacterium rivuli | 5,585 | 2,928 | 122 | 45 | |
Herbaspirillum | ||||||
hse | Herbaspirillum seropedicae SmR1 | 4,735 | 2,864 | 64 | 64 | |
hsz | Herbaspirillum seropedicae Z67 | 4,665 | 2,864 | 68 | 68 | |
hht | Herbaspirillum hiltneri | 4,327 | 2,644 | 56 | 56 | |
hrb | Herbaspirillum rubrisubalbicans | 4,661 | 2,916 | 66 | 65 | |
hee | Herbaspirillum sp. meg3 | 4,816 | 2,875 | 71 | 63 | |
hhf | Herbaspirillum huttiense | 4,932 | 2,936 | 77 | 76 | |
hfr | Herbaspirillum frisingense | 4,787 | 2,860 | 74 | 72 | |
hew | Herbaspirillum sp. DW155 | 4,933 | 2,784 | 74 | 39 | |
Zinderia | ||||||
zin | Candidatus Zinderia insecticola | 206 | 197 | 29 | 29 | |
Collimonas | ||||||
cfu | Collimonas fungivorans | 4,432 | 2,590 | 61 | 61 | |
care | Collimonas arenae | 5,076 | 2,747 | 63 | 62 | |
cpra | Collimonas pratensis | 5,424 | 2,709 | 61 | 61 | |
Massilia | ||||||
mnr | Massilia sp. NR 4-1 | 5,022 | 2,701 | 103 | 103 | |
masw | Massilia sp. WG5 | 5,271 | 2,893 | 111 | 111 | |
mass | Massilia violaceinigra | 6,216 | 2,950 | 107 | 104 | |
mtim | Massilia oculi | 4,880 | 2,589 | 108 | 107 | |
masy | Massilia sp. YMA4 | 5,232 | 2,854 | 108 | 107 | |
manc | Massilia antarctica | 6,265 | 2,960 | 117 | 110 | |
mfy | Massilia forsythiae | 5,140 | 2,435 | 114 | 112 | |
mvar | Massilia varians | 4,963 | 2,361 | 100 | 37 | |
meny | Massilia endophytica | 4,800 | 2,517 | 94 | 46 | |
mlir | Massilia litorea | 4,634 | 2,465 | 104 | 39 | |
masb | Massilia sp. B-10 | 5,605 | 575 | 88 | 14 | |
mash | Massilia sp. H-1 | 5,475 | 574 | 89 | 17 | |
Pseudoduganella | ||||||
masz | Pseudoduganella armeniaca | 5,159 | 2,723 | 109 | 108 | |
mali | Pseudoduganella albidiflava | 6,000 | 3,213 | 120 | 118 | |
mum | Pseudoduganella umbonata | 6,038 | 3,222 | 124 | 122 | |
mfla | Pseudoduganella flava | 5,806 | 3,038 | 105 | 103 | |
mpli | Pseudoduganella plicata | 4,885 | 2,642 | 108 | 107 | |
tct | Pseudoduganella chitinolytica | 5,415 | 2,692 | 109 | 27 | |
plue | Pseudoduganella lutea | 6,023 | 3,028 | 118 | 35 | |
Duganella | ||||||
dug | Duganella dendranthematis | 5,720 | 3,015 | 104 | 103 | |
dzo | Duganella zoogloeoides | 5,380 | 2,755 | 115 | 48 | |
Telluria | ||||||
tmj | Telluria mixta | 6,345 | 3,131 | 115 | 45 | |
Rugamonas | ||||||
rug | Rugamonas sp. DEMB1 | 5,545 | 2,428 | 133 | 31 | |
unclassified Telluria group | ||||||
ehb | Empedobacter haloabium | 5,499 | 2,790 | 108 | 53 | |
Oxalobacter | ||||||
ofo | Oxalobacter formigenes | 2,244 | 1,320 | 48 | 47 | |
ovb | Oxalobacter vibrioformis | 2,437 | 1,186 | 57 | 23 | |
oal | Oxalobacter aliiformigenes | 1,989 | 1,093 | 67 | 19 | |
Undibacterium | ||||||
upv | Undibacterium parvum | 4,143 | 2,379 | 85 | 83 | |
upi | Undibacterium piscinae | 3,359 | 1,965 | 69 | 68 | |
und | Undibacterium sp. KW1 | 5,980 | 2,577 | 101 | 27 | |
uny | Undibacterium sp. YM2 | 6,023 | 2,660 | 105 | 17 | |
ucy | Undibacterium cyanobacteriorum | 3,698 | 1,967 | 69 | 4 | |
Noviherbaspirillum | ||||||
nok | Noviherbaspirillum sp. UKPF54 | 4,257 | 2,389 | 69 | 68 | |
Glaciimonas | ||||||
glc | Glaciimonas sp. PAMC28666 | 4,354 | 2,666 | 72 | 71 | |
Actimicrobium | ||||||
actb | Actimicrobium sp. CCC2.4 | 3,680 | 2,187 | 78 | 33 | |
Sutterella | ||||||
sutt | Sutterella megalosphaeroides | 2,113 | 1,305 | 93 | 92 | |
sutk | Sutterella faecalis | 2,376 | 1,494 | 84 | 84 | |
sws | Sutterella wadsworthensis | 2,355 | 1,534 | 82 | 82 | |
Thiomonas | ||||||
tin | Thiomonas intermedia | 3,172 | 1,986 | 52 | 50 | |
thi | Thiomonas arsenitoxydans | 3,596 | 2,080 | 54 | 49 | |
Aquabacterium | ||||||
aon | Aquabacterium olei | 3,678 | 2,326 | 75 | 74 | |
Xylophilus | ||||||
xyk | Xylophilus rhododendri | 5,238 | 2,744 | 65 | 62 | |
xyg | Xylophilus sp. GOD-11R | 4,633 | 2,522 | 65 | 54 | |
Tepidimonas | ||||||
ttw | Tepidimonas taiwanensis | 2,634 | 1,775 | 64 | 64 | |
Eleftheria | ||||||
etb | Eleftheria terrae | 5,717 | 2,749 | 85 | 59 | |
Piscinibacterium | ||||||
pcaz | Piscinibacterium candidicorallinum | 3380 | 73 | |||
unclassified Burkholderiales | ||||||
bbag | Burkholderiales bacterium GJ-E10 | 3,087 | 1,750 | 46 | 46 | |
bbay | Burkholderiales bacterium YL45 | 2,500 | 1,497 | 83 | 83 | |
Nitrosomonas | ||||||
neu | Nitrosomonas europaea | 2,462 | 1,577 | 48 | 48 | |
net | Nitrosomonas eutropha | 2,551 | 1,577 | 47 | 47 | |
nit | Nitrosomonas sp. AL212 | 2,983 | 1,685 | 45 | 44 | |
nii | Nitrosomonas sp. Is79A3 | 3,372 | 1,725 | 45 | 44 | |
nco | Nitrosomonas communis | 3,189 | 1,636 | 45 | 45 | |
nur | Nitrosomonas ureae | 2,897 | 1,588 | 44 | 44 | |
nst | Nitrosomonas stercoris | 2,274 | 1,414 | 43 | 43 | |
Nitrosospira | ||||||
nmu | Nitrosospira multiformis | 2,805 | 1,652 | 49 | 49 | |
nlc | Nitrosospira lacus | 2,876 | 1,624 | 51 | 50 | |
niz | Nitrosospira sp. NRS527 | 3,165 | 1,483 | 48 | 47 | |
Sulfuritalea | ||||||
shd | Sulfuritalea hydrogenivorans | 3,587 | 2,177 | 50 | 50 | |
Methyloversatilis | ||||||
metr | Methyloversatilis sp. RAC08 | 3,557 | 2,096 | 53 | 53 | |
Denitratisoma | ||||||
doe | Denitratisoma oestradiolicum | 4,163 | 2,222 | 80 | 53 | |
deni | Denitratisoma sp. DHT3 | 3,246 | 1,912 | 63 | 32 | |
Rugosibacter | ||||||
rbu | Rugosibacter aromaticivorans | 2,457 | 1,570 | 53 | 52 | |
Nitricoxidivorans | ||||||
npv | Candidatus Nitricoxidivorans perseverans | 2,659 | 1,634 | 55 | 21 | |
Thiobacillus | ||||||
tbd | Thiobacillus denitrificans | 2,827 | 1,742 | 52 | 52 | |
tsw | Thiobacillus sedimenti | 2,921 | 1,720 | 55 | 26 | |
Methylobacillus | ||||||
mfa | Methylobacillus flagellatus | 2,753 | 1,794 | 55 | 55 | |
Methylotenera | ||||||
mmb | Methylotenera mobilis | 2,338 | 1,577 | 55 | 55 | |
meh | Methylotenera versatilis | 2,764 | 1,732 | 59 | 59 | |
Methylovorus | ||||||
mei | Methylovorus glucosotrophus | 2,910 | 1,759 | 57 | 56 | |
mep | Methylovorus sp. MP688 | 2,712 | 1,708 | 53 | 53 | |
Methylopumilus | ||||||
mbac | Candidatus Methylopumilus turicensis | 1,739 | 1,228 | 49 | 47 | |
mbat | Candidatus Methylopumilus planktonicus | 1,376 | 1,022 | 45 | 42 | |
mrk | Candidatus Methylopumilus rimovensis | 1,298 | 1,002 | 43 | 17 | |
muv | Candidatus Methylopumilus universalis | 1,289 | 998 | 42 | 16 | |
Methylophilus | ||||||
meu | Methylophilus sp. TWE2 | 2,791 | 1,754 | 49 | 49 | |
mmec | Methylophilus medardicus | 2,394 | 1,563 | 51 | 19 | |
medz | Methylophilus sp. DW102 | 2,804 | 1,716 | 55 | 12 | |
Methyloradius | ||||||
mpau | Methyloradius palustris | 2,576 | 1,628 | 48 | 48 | |
Sideroxydans | ||||||
slt | Sideroxydans lithotrophicus | 2,980 | 1,741 | 54 | 53 | |
side | Sideroxydans sp. CL21 | 1,258 | 649 | 48 | 21 | |
Gallionella | ||||||
gca | Gallionella capsiferriformans | 2,894 | 1,696 | 64 | 63 | |
Ferriphaselus | ||||||
fam | Ferriphaselus amnicola | 2,683 | 1,546 | 71 | 61 | |
Nitrotoga | ||||||
nim | Candidatus Nitrotoga sp. AM1P | 2,678 | 1,590 | 47 | 47 | |
narc | Candidatus Nitrotoga arctica | 3,166 | 1,594 | 93 | 40 | |
Ferrigenium | ||||||
fku | Ferrigenium kumadai | 2,428 | 1,636 | 57 | 57 | |
Sideroxyarcus | ||||||
seme | Sideroxyarcus emersonii | 2,677 | 1,663 | 52 | 52 | |
Sulfuricella | ||||||
sdr | Sulfuricella denitrificans | 3,073 | 1,849 | 51 | 51 | |
Sulfuriferula | ||||||
sulf | Sulfuriferula sp. AH1 | 2,817 | 1,764 | 59 | 58 | |
splb | Sulfuriferula plumbiphila | 3,497 | 2,058 | 52 | 52 | |
sniv | Sulfuriferula nivalis | 3,286 | 1,942 | 57 | 56 | |
Sulfurimicrobium | ||||||
slac | Sulfurimicrobium lacus skT11 | 3,678 | 2,055 | 53 | 53 | |
Usitatibacter | ||||||
uru | Usitatibacter rugosus | 4,253 | 2,221 | 60 | 41 | |
upl | Usitatibacter palustris | 3,759 | 2,068 | 52 | 40 | |
Azospira | ||||||
dsu | Azospira oryzae | 3,443 | 2,103 | 64 | 63 | |
ares | Azospira restricta | 3,718 | 2,268 | 60 | 60 | |
aiq | Azospira inquinata | 2,870 | 1,849 | 64 | 63 | |
Oryzomicrobium | ||||||
otr | Oryzomicrobium terrae | 3,120 | 2,031 | 64 | 64 | |
Niveibacterium | ||||||
niv | Niveibacterium microcysteis | 4,311 | 2,501 | 75 | 56 | |
Aromatoleum | ||||||
eba | Aromatoleum aromaticum | Ref | 4,598 | 2,296 | 69 | 68 |
abre | Aromatoleum bremense | 4,198 | 2,330 | 70 | 58 | |
apet | Aromatoleum petrolei | 4,963 | 2,819 | 67 | 51 | |
unclassified Rhodocyclaceae | ||||||
rbh | Rhodocyclaceae bacterium Thauera-like | 2,918 | 1,929 | 66 | 59 | |
Dechloromonas | ||||||
dar | Dechloromonas aromatica | 4,171 | 2,472 | 79 | 79 | |
dey | Dechloromonas sp. HYN0024 | 3,032 | 1,901 | 71 | 62 | |
dden | Dechloromonas denitrificans | 4,242 | 2,332 | 79 | 67 | |
dech | Dechloromonas sp. TW-R-39-2 | 3,246 | 1,943 | 77 | 47 | |
daj | Dechloromonas aquae | 3,181 | 1,921 | 91 | ||
Quatrionicoccus | ||||||
qau | Quatrionicoccus australiensis | 3,840 | 2,231 | 79 | 67 | |
Ferribacterium | ||||||
fle | Ferribacterium limneticum | 3,883 | 2,222 | 71 | 61 | |
Azonexus | ||||||
ahv | Azonexus hydrophilus | 3,633 | 2,071 | 72 | 34 | |
Azoarcus | ||||||
azo | Azoarcus olearius BH72 | 3,989 | 2,450 | 65 | 64 | |
aoa | Azoarcus olearius DQS-4 | 4,068 | 2,456 | 67 | 67 | |
aza | Azoarcus sp. KH32C | 5,188 | 3,014 | 79 | 79 | |
azi | Azoarcus sp. CIB | 4,719 | 2,731 | 69 | 69 | |
azd | Azoarcus sp. DN11 | 4,431 | 2,707 | 72 | 72 | |
azr | Azoarcus sp. DD4 | 4,857 | 2,860 | 73 | 69 | |
Thauera | ||||||
tmz | Thauera aminoaromatica | 3,978 | 2,395 | 74 | 73 | |
thu | Thauera humireducens SgZ-1 | 3,747 | 2,339 | 77 | 75 | |
thau | Thauera humireducens Piv1 | 4,389 | 2,436 | 98 | 28 | |
tcl | Thauera chlorobenzoica | 3,396 | 2,147 | 70 | 70 | |
thk | Thauera sp. K11 | 4,416 | 2,556 | 76 | 75 | |
tak | Thauera aromatica | 3,399 | 2,164 | 70 | 64 | |
thag | Thauera sp. GDN1 | 3,484 | 2,207 | 83 | 26 | |
Nitrogeniibacter | ||||||
azq | Nitrogeniibacter mangrovi | 3,810 | 2,306 | 64 | 60 | |
Parazoarcus | ||||||
acom | Parazoarcus communis | 4,059 | 2,550 | 74 | 73 | |
Pseudazoarcus | ||||||
atw | Pseudazoarcus pumilus | 3,058 | 1,906 | 64 | 63 | |
unclassified Zoogloeaceae | ||||||
zpa | Zoogloeaceae bacteirum Par-f-2 | 2,838 | 1,934 | 66 | 65 | |
Fluviibacter | ||||||
fpho | Fluviibacter phosphoraccumulans | 2,278 | 1,465 | 51 | 51 | |
Ferrovum | ||||||
fmy | Ferrovum myxofaciens | 2,678 | 1,549 | 52 | 50 | |
Accumulibacter | ||||||
app | Candidatus Accumulibacter phosphatis | 4,562 | 2,390 | 58 | 56 | |
acog | Candidatus Accumulibacter cognatus | 4372 | 54 | |||
Tremblaya | ||||||
tpn | Candidatus Tremblaya princeps PCIT | 121 | 113 | 19 | 16 | |
tpq | Candidatus Tremblaya princeps PCVAL | 116 | 113 | 20 | 17 | |
tpj | Candidatus Tremblaya phenacola | 175 | 160 | 36 | 36 | |
Kinetoplastibacterium | ||||||
kci | Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255) | 734 | 653 | 53 | 53 | |
kct | Candidatus Kinetoplastibacterium crithidii TCC036E | 728 | 665 | 53 | 53 | |
kbl | Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis) | 715 | 649 | 52 | 52 | |
kbt | Candidatus Kinetoplastibacterium blastocrithidii TCC012E | 724 | 661 | 52 | 52 | |
kde | Candidatus Kinetoplastibacterium desouzaii | 742 | 675 | 52 | 52 | |
kga | Candidatus Kinetoplastibacterium galatii | 727 | 663 | 52 | 52 | |
kon | Candidatus Kinetoplastibacterium oncopeltii | 694 | 637 | 52 | 52 | |
kso | Candidatus Kinetoplastibacterium sorsogonicusi | 670 | 609 | 49 | 39 | |
Profftella | ||||||
ssdc | Candidatus Profftella armatura | 372 | 330 | 37 | 37 | |
Nasuia | ||||||
ndl | Candidatus Nasuia deltocephalinicola | 137 | 102 | 32 | 30 | |
Vidania | ||||||
vfg | Candidatus Vidania fulgoroideae | 154 | 133 | 29 | 1 | |
Desulfobacillus | ||||||
ddz | Candidatus Desulfobacillus denitrificans | 3,104 | 2,007 | 56 | 47 | |
unclassified Betaproteobacteria | ||||||
bprc | Beta proteobacterium CB | 2,112 | 1,366 | 39 | 39 | |
beb | Betaproteobacteria bacterium UKL13-2 | 2,772 | 1,644 | 50 | 50 | |
beba | Betaproteobacteria bacterium GR16-43 | 4,406 | 2,226 | 56 | 53 | |
Alphaproteobacteria | ||||||
Rickettsia | ||||||
rpr | Rickettsia prowazekii Madrid E | Ref | 834 | 609 | 37 | 37 |
rpo | Rickettsia prowazekii BuV67-CWPP | 843 | 615 | 36 | 36 | |
rpw | Rickettsia prowazekii Chernikova | 845 | 614 | 36 | 36 | |
rpz | Rickettsia prowazekii Dachau | 839 | 610 | 36 | 36 | |
rpg | Rickettsia prowazekii GvV257 | 829 | 609 | 36 | 36 | |
rps | Rickettsia prowazekii Katsinyian | 844 | 613 | 36 | 36 | |
rpv | Rickettsia prowazekii RpGvF24 | 834 | 612 | 36 | 36 | |
rpq | Rickettsia prowazekii Rp22 | 952 | 612 | 39 | 39 | |
rpl | Rickettsia prowazekii Breinl | 920 | 617 | 36 | 36 | |
rpn | Rickettsia prowazekii NMRC Madrid E | 938 | 613 | 36 | 36 | |
rty | Rickettsia typhi Wilmington | 838 | 605 | 39 | 38 | |
rtt | Rickettsia typhi TH1527 | 838 | 603 | 36 | 36 | |
rtb | Rickettsia typhi B9991CWPP | 839 | 603 | 36 | 36 | |
rcm | Rickettsia canadensis McKiel | 1,093 | 612 | 35 | 35 | |
rcc | Rickettsia canadensis CA410 | 1,016 | 608 | 36 | 36 | |
rbe | Rickettsia bellii RML369-C | 1,429 | 771 | 40 | 40 | |
rbo | Rickettsia bellii OSU 85-389 | 1,476 | 741 | 35 | 35 | |
rco | Rickettsia conorii | Ref | 1,374 | 665 | 38 | 38 |
rhe | Rickettsia conorii subsp. heilongjiangensis | 1,297 | 653 | 36 | 36 | |
rfe | Rickettsia felis | 1,512 | 790 | 39 | 39 | |
rak | Rickettsia akari | 1,259 | 648 | 34 | 34 | |
rri | Rickettsia rickettsii Sheila Smith | 1,345 | 642 | 35 | 35 | |
rrj | Rickettsia rickettsii Iowa | 1,384 | 645 | 37 | 37 | |
rra | Rickettsia rickettsii Arizona | 1,343 | 649 | 37 | 37 | |
rrc | Rickettsia rickettsii Colombia | 1,350 | 647 | 37 | 37 | |
rrh | Rickettsia rickettsii Hauke | 1,340 | 648 | 37 | 37 | |
rrb | Rickettsia rickettsii Brazil | 1,332 | 648 | 37 | 37 | |
rrn | Rickettsia rickettsii Hino | 1,336 | 649 | 37 | 37 | |
rrp | Rickettsia rickettsii Hlp#2 | 1,308 | 647 | 37 | 37 | |
rrm | Rickettsia rickettsii Morgan | 1,343 | 644 | 38 | 38 | |
rrr | Rickettsia rickettsii R | 1,334 | 640 | 37 | 37 | |
rms | Rickettsia massiliae MTU5 | 980 | 663 | 39 | 39 | |
rmi | Rickettsia massiliae AZT80 | 1,207 | 647 | 36 | 36 | |
rpk | Rickettsia peacockii | 947 | 628 | 37 | 37 | |
raf | Rickettsia africae | 1,041 | 647 | 39 | 39 | |
rja | Rickettsia japonica | 971 | 631 | 39 | 39 | |
rsv | Rickettsia slovaca 13-B | 1,114 | 632 | 39 | 39 | |
rsw | Rickettsia slovaca D-CWPP | 1,347 | 650 | 36 | 36 | |
rph | Rickettsia philipii | 1,344 | 651 | 36 | 36 | |
rau | Rickettsia australis | 1,261 | 671 | 36 | 36 | |
rmo | Rickettsia montanensis | 1,217 | 662 | 36 | 36 | |
rpp | Rickettsia parkeri | 1,318 | 644 | 36 | 36 | |
rre | Rickettsia rhipicephali | 1,266 | 649 | 36 | 36 | |
ram | Rickettsia amblyommatis GAT-30V | 1,390 | 682 | 36 | 36 | |
rab | Rickettsia amblyommatis Ac37 | 1,086 | 652 | 37 | 37 | |
rmc | Rickettsia monacensis | 1,640 | 643 | 35 | 35 | |
ras | Rickettsia asiatica | 1,607 | 707 | 37 | 37 | |
rtl | Rickettsia tillamookensis | 1,346 | 713 | 36 | 36 | |
rkt | Candidatus Rickettsia kotlanii | 1,242 | 630 | 37 | 4 | |
rase | Rickettsia asembonensis | 1,585 | 683 | 36 | 2 | |
ric | Rickettsia sp. MEAM1 (Bemisia tabaci) | 1,233 | 863 | 39 | 39 | |
rem | Rickettsia endosymbiont of Culicoides impunctatus | 1,363 | 662 | 40 | ||
rex | Rickettsia endosymbiont of Cimex lectularius | 1,475 | 708 | 41 | ||
Orientia | ||||||
ots | Orientia tsutsugamushi Boryong | 1,182 | 613 | 37 | 36 | |
ott | Orientia tsutsugamushi Ikeda | 1,967 | 750 | 38 | 38 | |
Sneabacter | ||||||
snay | Candidatus Sneabacter namystus | 583 | 405 | 39 | ||
Phycorickettsia | ||||||
ptc | Candidatus Phycorickettsia trachydisci | 1,251 | 612 | 39 | 39 | |
Megaera | ||||||
menm | Candidatus Megaera endosymbiont of Mesostigma viride | 1,318 | 758 | 40 | 30 | |
Wolbachia | ||||||
wol | Wolbachia endosymbiont of Drosophila melanogaster | Ref | 1,195 | 599 | 39 | 39 |
wri | Wolbachia sp. wRi | 1,150 | 648 | 39 | 39 | |
wen | Wolbachia endosymbiont of Drosophila simulans wHa | 1,009 | 613 | 37 | 37 | |
wed | Wolbachia endosymbiont of Drosophila simulans wNo | 1,040 | 629 | 37 | 37 | |
wpi | Wolbachia endosymbiont of Culex quinquefasciatus Pel | 1,275 | 635 | 37 | 37 | |
wbm | Wolbachia endosymbiont strain TRS of Brugia malayi | 805 | 544 | 37 | 37 | |
woo | Wolbachia endosymbiont of Onchocerca ochengi | 647 | 506 | 39 | 38 | |
wcl | Wolbachia endosymbiont of Cimex lectularius | 1,216 | 580 | 38 | 38 | |
weo | Wolbachia endosymbiont of Folsomia candida | 1,509 | 636 | 42 | 41 | |
wpp | Wolbachia pipientis | 1,205 | 677 | 41 | 40 | |
wec | Wolbachia endosymbiont of Carposina sasakii | 1,260 | 633 | 41 | 10 | |
wdm | Wolbachia endosymbiont of Drosophila mauritiana | 1,048 | 625 | 41 | 10 | |
web | Wolbachia endosymbiont of Brugia pahangi | 1,019 | 545 | 37 | 9 | |
wes | Wolbachia endosymbiont of Spodoptera picta | 1,043 | 616 | 41 | 10 | |
wea | Wolbachia endosymbiont of Drosophila ananassae | 1,289 | 655 | 38 | 10 | |
wem | Wolbachia endosymbiont of Chrysomya megacephala | 1,142 | 635 | 41 | 10 | |
wey | Wolbachia endosymbiont of Drosophila yakuba | 1,102 | 620 | 37 | 11 | |
wel | Wolbachia endosymbiont of Litomosoides sigmodontis | 714 | 519 | 41 | 8 | |
wet | Wolbachia endosymbiont of Cruorifilaria tuberocauda | 623 | 506 | 42 | 7 | |
wew | Wolbachia endosymbiont of Wiebesia pumilae | 1,157 | 611 | 44 | 12 | |
wer | Wolbachia endosymbiont of Drosophila santomea | 1,120 | 617 | 37 | 11 | |
wef | Wolbachia endosymbiont of Dirofilaria (Dirofilaria) immitis | 660 | 513 | 41 | 7 | |
wep | Wolbachia endosymbiont of Anopheles demeilloni | 1,157 | 595 | 41 | 10 | |
weh | Wolbachia endosymbiont of Drosophila innubila | 1,073 | 600 | 41 | 10 | |
wee | Wolbachia endosymbiont of Corcyra cephalonica | 1,198 | 617 | 41 | 10 | |
weg | Wolbachia endosymbiont of Aedes aegypti | 1,225 | 625 | 41 | 11 | |
weu | Wolbachia endosymbiont of Dipetalonema caudispina | 607 | 506 | 40 | 4 | |
wej | Wolbachia endosymbiont of Delia radicum | 1,427 | 652 | 42 | 10 | |
ssiv | Wolbachia endosymbiont of Oryzaephilus surinamensis | 1,471 | 660 | 40 | 5 | |
wex | Wolbachia endosymbiont of Ostrinia furnacalis | 1,040 | 607 | 41 | 1 | |
wek | Wolbachia endosymbiont of Ostrinia scapulalis | 1,050 | 606 | 41 | 1 | |
weq | Wolbachia endosymbiont of Aedes albopictus | 1,179 | 596 | 41 | 1 | |
wev | Wolbachia endosymbiont of Drosophila pseudotakahashii | 1,239 | 630 | 41 | ||
wend | Wolbachia endosymbiont of Frankliniella intonsa | 1,266 | 595 | 43 | 1 | |
wedc | Wolbachia endosymbiont of Drosophila aff. chauvacae BK-2020 | 1,191 | 624 | 41 | ||
wezt | Wolbachia endosymbiont of Zaprionus tsacasi | 1,224 | 634 | 41 | ||
welo | Wolbachia endosymbiont of Listronotus oregonensis | 1,340 | 612 | 41 | ||
weno | Wolbachia endosymbiont of Ceratosolen solmsi | 1,003 | 583 | 41 | ||
wenh | Wolbachia endosymbiont of Howardula sp. HA_SPA | 482 | 432 | 40 | ||
wenc | Wolbachia endosymbiont of Diaphorina citri | 1,332 | 642 | 41 | ||
wms | Candidatus Wolbachia massiliensis | 1,055 | 584 | 39 | ||
Anaplasma | ||||||
ama | Anaplasma marginale St. Maries | 949 | 632 | 37 | 37 | |
amf | Anaplasma marginale Florida | 942 | 636 | 40 | 40 | |
amw | Anaplasma marginale Dawn | 794 | 523 | 39 | 39 | |
amp | Anaplasma marginale Gypsy Plains | 858 | 576 | 40 | 40 | |
acn | Anaplasma centrale | 925 | 632 | 40 | 40 | |
aph | Anaplasma phagocytophilum HZ | 1,352 | 611 | 42 | 42 | |
apy | Anaplasma phagocytophilum HZ2 | 1,247 | 615 | 40 | 40 | |
apd | Anaplasma phagocytophilum Dog2 | 1,258 | 611 | 40 | 40 | |
apha | Anaplasma phagocytophilum JM | 1,256 | 612 | 40 | 40 | |
aoh | Anaplasma ovis | 933 | 633 | 44 | 43 | |
aplt | Anaplasma platys | 850 | 564 | 40 | ||
Ehrlichia | ||||||
eru | Ehrlichia ruminantium Welgevonden (South Africa) | 888 | 606 | 41 | 41 | |
erw | Ehrlichia ruminantium Welgevonden (France) | 958 | 612 | 39 | 39 | |
erg | Ehrlichia ruminantium Gardel | 950 | 612 | 39 | 39 | |
ecn | Ehrlichia canis | 925 | 606 | 42 | 42 | |
ech | Ehrlichia chaffeensis Arkansas | 1,105 | 612 | 43 | 42 | |
echa | Ehrlichia chaffeensis Heartland | 970 | 602 | 40 | 40 | |
echj | Ehrlichia chaffeensis Jax | 989 | 606 | 40 | 40 | |
echl | Ehrlichia chaffeensis Liberty | 989 | 604 | 40 | 40 | |
echs | Ehrlichia chaffeensis Osceola | 988 | 606 | 40 | 40 | |
echv | Ehrlichia chaffeensis Saint Vincent | 973 | 604 | 40 | 40 | |
echw | Ehrlichia chaffeensis Wakulla | 980 | 605 | 40 | 40 | |
echp | Ehrlichia chaffeensis West Paces | 962 | 604 | 40 | 40 | |
emr | Ehrlichia muris | 904 | 601 | 41 | 41 | |
ehh | Ehrlichia japonica | 946 | 606 | 39 | 39 | |
ehj | Ehrlichia sp. JZT12 | 987 | 534 | 42 | ||
Neorickettsia | ||||||
nse | Neorickettsia sennetsu | 932 | 556 | 38 | 38 | |
nri | Neorickettsia risticii | 898 | 557 | 38 | 38 | |
nhm | Neorickettsia helminthoeca | 868 | 560 | 36 | 36 | |
nef | Neorickettsia findlayensis | 735 | 545 | 39 | 38 | |
Neoehrlichia | ||||||
nmik | Neoehrlichia mikurensis | 915 | 546 | 42 | 5 | |
Midichloria | ||||||
mmn | Candidatus Midichloria mitochondrii | 1,210 | 623 | 38 | 38 | |
Fokinia | ||||||
fso | Candidatus Fokinia solitaria | 720 | 481 | 40 | 39 | |
Bandiella | ||||||
bnu | Candidatus Bandiella numerosa | 1,455 | 801 | 41 | 2 | |
bwf | Candidatus Bandiella woodruffii | 1,595 | 818 | 64 | 1 | |
unclassified Rickettsiales | ||||||
rbt | Rickettsiales bacterium Ac37b | 1,785 | 861 | 42 | 42 | |
ren | Rickettsiales endosymbiont of Stachyamoeba lipophora | 1,521 | 855 | 45 | 43 | |
Odyssella | ||||||
paca | Candidatus Odyssella acanthamoebae | 1,826 | 840 | 50 | 50 | |
Bodocaedibacter | ||||||
pbal | Candidatus Bodocaedibacter vickermanii | 1,214 | 636 | 47 | ||
Paracaedimonas | ||||||
caq | Candidatus Paracaedimonas acanthamoebae | 1,683 | 802 | 46 | 46 | |
Nucleicultrix | ||||||
naf | Candidatus Nucleicultrix amoebiphila | 1,455 | 785 | 51 | 51 | |
Gromoviella | ||||||
gagg | Candidatus Gromoviella agglomerans | 512 | 348 | 45 | 24 | |
Hydrogenosomobacter | ||||||
hec | Candidatus Hydrogenosomobacter endosymbioticus | 721 | 444 | 48 | 38 | |
Cytomitobacter | ||||||
cip | Candidatus Cytomitobacter indipagum | 529 | 337 | 42 | ||
cpri | Candidatus Cytomitobacter primus | 519 | 337 | 43 | ||
Nesciobacter | ||||||
nabu | Candidatus Nesciobacter abundans | 501 | 333 | 42 | ||
unclassified Holosporaceae | ||||||
eaa | Endosymbiont of Acanthamoeba sp. UWC8 | 1,519 | 795 | 39 | 39 | |
Mesorhizobium | ||||||
mlo | Mesorhizobium japonicum MAFF 303099 | Ref | 7,281 | 3,275 | 57 | 56 |
mln | Mesorhizobium loti NZP2037 | 6,964 | 3,504 | 62 | 58 | |
mci | Mesorhizobium ciceri biovar biserrulae | 6,264 | 3,294 | 62 | 60 | |
mcic | Mesorhizobium ciceri CC1192 | 6,475 | 3,259 | 64 | 24 | |
mop | Mesorhizobium opportunistum | 6,508 | 3,296 | 62 | 58 | |
mam | Mesorhizobium australicum | 5,792 | 3,042 | 62 | 59 | |
mamo | Mesorhizobium amorphae | 6,556 | 3,361 | 63 | 60 | |
mesw | Mesorhizobium sp. WSM1497 | 6,656 | 3,408 | 62 | 57 | |
mesm | Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 | 5,799 | 3,100 | 59 | 53 | |
mesp | Mesorhizobium sp. Pch-S | 6,068 | 3,087 | 56 | 52 | |
mhua | Mesorhizobium huakuii | 6,571 | 3,281 | 63 | 55 | |
mjr | Mesorhizobium jarvisii | 6,793 | 3,369 | 62 | 58 | |
merd | Mesorhizobium erdmanii | 6,143 | 3,254 | 63 | 56 | |
mesr | Mesorhizobium sp. 8 | 4,493 | 2,472 | 54 | 47 | |
moh | Mesorhizobium onobrychidis | 6,760 | 3,147 | 70 | 51 | |
mmei | Mesorhizobium mediterraneum | 6,695 | 3,273 | 63 | 21 | |
mesj | Mesorhizobium sp. J8 | 6,325 | 3,175 | 59 | 1 | |
mesi | Mesorhizobium sp. PAMC28654 | 6,178 | 2,557 | 64 | 2 | |
mesu | Mesorhizobium sp. AR10 | 6,277 | 3,050 | 57 | 2 | |
mess | Mesorhizobium sp. ANAO-SY3R2 | 4,970 | 2,711 | 70 | ||
mews | Mesorhizobium sp. WSM4904 | 6,228 | 3,109 | 54 | ||
mewm | Mesorhizobium sp. WSM4906 | 6,248 | 3,125 | 56 | ||
meaa | Mesorhizobium sp. AaZ16 | 5,965 | 2,774 | 55 | ||
Nitratireductor | ||||||
niy | Nitratireductor mangrovi | 4,640 | 2,556 | 54 | 49 | |
nki | Nitratireductor kimnyeongensis | 3,775 | 2,254 | 59 | 50 | |
nrh | Nitratireductor rhodophyticola | 4,379 | 2,487 | 60 | 18 | |
ntu | Nitratireductor thuwali | 4,558 | 2,500 | 64 | 8 | |
Aquibium | ||||||
meso | Aquibium oceanicum | 5,046 | 2,684 | 59 | 56 | |
Chelativorans | ||||||
mes | Chelativorans sp. BNC1 | 4,543 | 2,463 | 61 | 59 | |
chea | Chelativorans sp. AA-79 | 5,439 | 2,930 | 60 | 19 | |
Aminobacter | ||||||
aak | Aminobacter aminovorans | 6,613 | 3,467 | 67 | 65 | |
amih | Aminobacter sp. MSH1 | 5,627 | 2,953 | 61 | 58 | |
amis | Aminobacter sp. Y103A | 6,400 | 3,310 | 56 | 23 | |
anj | Aminobacter niigataensis | 5,529 | 2,753 | 76 | 23 | |
Phyllobacterium | ||||||
pht | Phyllobacterium zundukense | 5,782 | 3,058 | 66 | 55 | |
phyl | Phyllobacterium sp. 628 | 4,813 | 2,467 | 65 | 52 | |
Roseitalea | ||||||
rpod | Roseitalea porphyridii | 3,371 | 1,967 | 49 | 48 | |
Oricola | ||||||
orm | Oricola thermophila | 3,800 | 2,238 | 53 | 48 | |
Oceaniradius | ||||||
ost | Oceaniradius stylonematis | 3,501 | 2,011 | 50 | 1 | |
Ahrensia | ||||||
amax | Ahrensia marina | 3,628 | 2,080 | 49 | ||
Parvibaculum | ||||||
pla | Parvibaculum lavamentivorans | 3,636 | 1,888 | 49 | 49 | |
Pyruvatibacter | ||||||
pmob | Pyruvatibacter mobilis | 3,044 | 1,655 | 53 | 52 | |
Kaustia | ||||||
kmn | Kaustia mangrovi | 4,201 | 2,418 | 53 | 52 | |
Phaeomarinobacter | ||||||
pect | Candidatus Phaeomarinobacter ectocarpi | 3,295 | 1,550 | 43 | 12 | |
unclassified Rhodobiaceae | ||||||
rbs | Rhodobiaceae bacterium SMS8 | 3,730 | 1,786 | 58 | 49 | |
Sinorhizobium | ||||||
sme | Sinorhizobium meliloti 1021 | Ref | 6,233 | 3,316 | 71 | 66 |
smk | Sinorhizobium meliloti AK83 | 6,510 | 3,371 | 69 | 68 | |
smq | Sinorhizobium meliloti BL225C | 6,354 | 3,377 | 68 | 67 | |
smx | Sinorhizobium meliloti SM11 | 7,093 | 3,417 | 63 | 63 | |
smi | Sinorhizobium meliloti Rm41 | 6,844 | 3,581 | 64 | 64 | |
smeg | Sinorhizobium meliloti GR4 | 6,656 | 3,493 | 120 | 66 | |
smel | Sinorhizobium meliloti 2011 | 6,263 | 3,358 | 1,940 | 69 | |
smer | Sinorhizobium meliloti RMO17 | 6,136 | 3,338 | 64 | 64 | |
smd | Sinorhizobium medicae | 6,213 | 3,322 | 64 | 64 | |
rhi | Sinorhizobium fredii NGR234 | 6,366 | 3,382 | 81 | 63 | |
sfh | Sinorhizobium fredii HH103 | 6,187 | 3,159 | 62 | 62 | |
sfd | Sinorhizobium fredii USDA 257 | 6,115 | 3,175 | 62 | 62 | |
six | Sinorhizobium sp. RAC02 | 6,267 | 3,393 | 60 | 60 | |
same | Sinorhizobium americanum | 6,400 | 3,309 | 62 | 56 | |
sino | Sinorhizobium sp. CCBAU 05631 | 6,511 | 3,105 | 61 | 55 | |
esj | Sinorhizobium sojae | 5,976 | 2,981 | 61 | 60 | |
eak | Sinorhizobium alkalisoli | 6,021 | 3,132 | 63 | 63 | |
emx | Sinorhizobium mexicanum | 6,390 | 3,450 | 66 | 65 | |
enu | Sinorhizobium numidicum | 5,983 | 3,049 | 77 | 25 | |
egi | Sinorhizobium garamanticum | 6,111 | 3,159 | 68 | 29 | |
skm | Sinorhizobium kummerowiae | 5,959 | 3,216 | 67 | 18 | |
steg | Sinorhizobium terangae | 5,918 | 3,069 | 68 | 1 | |
Ensifer | ||||||
ead | Ensifer adhaerens OV14 | 5,451 | 3,315 | 74 | 74 | |
eah | Ensifer adhaerens Casida A | 6,623 | 3,459 | 81 | 79 | |
ecaa | Ensifer canadensis | 7,271 | 3,643 | 80 | 28 | |
enp | Ensifer sp. PDNC004 | 6,258 | 3,202 | 81 | 27 | |
eaw | Ensifer aridi | 5,968 | 3,049 | 68 | 3 | |
Agrobacterium | ||||||
atu | Agrobacterium fabrum | Ref | 5,355 | 2,876 | 75 | 67 |
ata | Agrobacterium tumefaciens S33 | 4,991 | 2,829 | 71 | 70 | |
agr | Agrobacterium tumefaciens H13-3 | 5,345 | 2,909 | 72 | 72 | |
atf | Agrobacterium tumefaciens Ach5 | 5,276 | 2,981 | 71 | 71 | |
agc | Agrobacterium sp. RAC06 | 4,716 | 2,649 | 61 | 61 | |
agt | Agrobacterium sp. 33MFTa1.1 | 4,925 | 2,797 | 70 | 69 | |
alf | Agrobacterium larrymoorei | 4,777 | 2,748 | 75 | 74 | |
arui | Agrobacterium rubi | 5,024 | 2,843 | 68 | 67 | |
avq | Agrobacterium vaccinii | 4,491 | 2,478 | 74 | 57 | |
avv | Agrobacterium vitis VAT03-9 | 5,700 | 2,957 | 69 | 32 | |
avf | Agrobacterium vitis VAR03-1 | 4,986 | 2,679 | 67 | 32 | |
asal | Agrobacterium salinitolerans | 5,307 | 2,883 | 71 | 31 | |
rir | Agrobacterium pusense IRBG74 | 5,479 | 2,919 | 87 | 67 | |
rpus | Agrobacterium pusense CFBP5875 | 4,570 | 2,669 | 72 | 60 | |
acuc | Agrobacterium cucumeris | 5,149 | 2,889 | 69 | 35 | |
aleg | Agrobacterium leguminum | 5,752 | 3,214 | 73 | 39 | |
agrc | Agrobacterium sp. CGMCC 11546 | 5,133 | 2,749 | 70 | 5 | |
Allorhizobium | ||||||
avi | Allorhizobium ampelinum | 5,389 | 3,083 | 80 | 69 | |
Rhizobium | ||||||
ret | Rhizobium etli CFN 42 | Ref | 5,957 | 3,073 | 59 | 59 |
rec | Rhizobium etli CIAT 652 | 6,056 | 3,023 | 60 | 60 | |
rel | Rhizobium etli bv. mimosae Mim1 | 6,792 | 3,440 | 154 | 63 | |
rep | Rhizobium etli bv. phaseoli IE4803 | 6,599 | 3,364 | 127 | 63 | |
rei | Rhizobium etli bv. mimosae IE4771 | 6,743 | 3,453 | 123 | 63 | |
rle | Rhizobium johnstonii | Ref | 7,131 | 3,538 | ||
rlt | Rhizobium leguminosarum bv. trifolii WSM2304 | 6,415 | 3,324 | 65 | 63 | |
rlg | Rhizobium leguminosarum bv. trifolii WSM1325 | 7,001 | 3,461 | 63 | 62 | |
rlb | Rhizobium leguminosarum bv. trifolii WSM1689 | 6,711 | 3,310 | 61 | 61 | |
rlu | Rhizobium leguminosarum bv. trifolii CB782 | 6,496 | 3,273 | 60 | 60 | |
rtr | Rhizobium tropici | 6,287 | 3,321 | 62 | 62 | |
rhl | Rhizobium favelukesii | 7,057 | 3,189 | 57 | 57 | |
rga | Rhizobium gallicum bv. gallicum | 7,041 | 3,525 | 73 | 62 | |
rhn | Rhizobium sp. N1341 | 6,171 | 3,139 | 133 | 63 | |
rpha | Rhizobium phaseoli | 6,305 | 3,236 | 125 | 57 | |
rhx | Rhizobium sp. N731 | 5,870 | 3,079 | 133 | 56 | |
rhv | Rhizobium sp. S41 | 5,176 | 2,840 | 81 | 64 | |
rhk | Rhizobium sp. Kim5 | 6,521 | 3,291 | 129 | 57 | |
rez | Rhizobium esperanzae | 6,128 | 3,134 | 133 | 56 | |
rjg | Rhizobium jaguaris | 7,163 | 3,755 | 67 | 63 | |
rhr | Rhizobium sp. 11515TR | 6,512 | 3,465 | 67 | 66 | |
rgr | Rhizobium grahamii | 5,181 | 2,792 | 69 | 68 | |
rad | Rhizobium acidisoli | 6,710 | 3,439 | 63 | 62 | |
roy | Rhizobium oryzihabitans | 5,109 | 2,666 | 77 | 74 | |
rii | Rhizobium indicum | 6,980 | 3,591 | 64 | 63 | |
rhid | Rhizobium hidalgonense | 6,203 | 3,319 | 63 | 62 | |
rbq | Rhizobium binae | 6,431 | 3,386 | 64 | 63 | |
rln | Rhizobium lentis | 5,963 | 3,163 | 67 | 63 | |
rban | Rhizobium bangladeshense | 5,805 | 3,126 | 64 | 63 | |
rrg | Rhizobium ruizarguesonis | 7,213 | 3,682 | 65 | 63 | |
rls | Rhizobium lusitanum | 6,161 | 3,264 | 66 | 64 | |
rros | Rhizobium rosettiformans | 4,860 | 2,534 | 64 | 63 | |
raw | Rhizobium anhuiense bv. trifolii | 6,780 | 3,518 | 64 | 26 | |
rsul | Rhizobium sullae | 6,992 | 3,444 | 65 | 22 | |
rlw | Rhizobium laguerreae | 6,547 | 3,281 | 65 | 17 | |
rrho | Rhizobium rhododendri | 5,405 | 2,858 | 71 | 18 | |
rtu | Rhizobium tumorigenes | 5,424 | 2,789 | 69 | 18 | |
rct | Rhizobium croatiense | 4,116 | 2,183 | 64 | 26 | |
ara | Rhizobium rhizogenes K84 | 6,684 | 3,695 | 68 | 63 | |
aro | Rhizobium rhizogenes K599 | 5,057 | 2,925 | 70 | 69 | |
rbw | Rhizobium brockwellii | 6,642 | 3,417 | 67 | 25 | |
rif | Rhizobium indigoferae | 4,583 | 2,298 | 65 | 6 | |
rhiz | Rhizobium sp. BT03 | 6,357 | 3,318 | 64 | 3 | |
rhib | Rhizobium sp. AB2/73 | 6,762 | 3,238 | 64 | 1 | |
Neorhizobium | ||||||
ngl | Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141 | 6,153 | 3,289 | 60 | 60 | |
ngg | Neorhizobium galegae bv. orientalis HAMBI 540 | 6,170 | 3,315 | 60 | 60 | |
neo | Neorhizobium sp. SOG26 | 4,313 | 2,458 | 68 | 59 | |
nen | Neorhizobium sp. NCHU2750 | 5,923 | 3,191 | 68 | 59 | |
npm | Neorhizobium petrolearium | 6,402 | 3,443 | 65 | 25 | |
Pseudorhizobium | ||||||
rht | Pseudorhizobium banfieldiae | 4,640 | 2,500 | 90 | 55 | |
rfv | Pseudorhizobium flavum | 4,593 | 2,586 | 53 | 50 | |
Liberibacter | ||||||
las | Candidatus Liberibacter asiaticus psy62 | 1,109 | 730 | 53 | 53 | |
laa | Candidatus Liberibacter asiaticus gxpsy | 1,141 | 737 | 50 | 50 | |
lat | Candidatus Liberibacter asiaticus Ishi-1 | 1,074 | 736 | 53 | 53 | |
lso | Candidatus Liberibacter solanacearum | 1,192 | 741 | 54 | 53 | |
lcc | Liberibacter crescens | 1,378 | 914 | 54 | 54 | |
lar | Candidatus Liberibacter americanus | 983 | 712 | 54 | 54 | |
lau | Candidatus Liberibacter africanus | 1,017 | 714 | 53 | 53 | |
Shinella | ||||||
shz | Shinella sp. HZN7 | 6,694 | 3,737 | 64 | 63 | |
szo | Shinella zoogloeoides | 4,575 | 2,488 | 66 | 63 | |
soj | Shinella oryzae | 4,875 | 2,818 | 64 | 63 | |
ssum | Shinella sumterensis | 5,582 | 3,051 | 64 | 21 | |
shin | Shinella sp. XGS7 | 4,587 | 2,430 | 93 | 46 | |
Georhizobium | ||||||
abaw | Georhizobium profundi | 4,121 | 2,312 | 58 | 55 | |
Peteryoungia | ||||||
pdes | Peteryoungia desertarenae | 4,014 | 2,325 | 66 | 64 | |
Hoeflea | ||||||
hoe | Hoeflea sp. IMCC20628 | 4,811 | 2,672 | 65 | 55 | |
Aliirhizobium | ||||||
asit | Aliirhizobium terrae | 4,774 | 1,588 | 71 | 9 | |
Kaistia | ||||||
kai | Kaistia sp. 32K | 5,002 | 2,718 | 72 | 70 | |
Brucella | ||||||
bme | Brucella melitensis bv. 1 16M | Ref | 3,198 | 1,944 | 66 | 66 |
bmel | Brucella melitensis bv. 1 16M | 3,110 | 1,915 | 63 | 63 | |
bmi | Brucella melitensis ATCC 23457 | 3,136 | 1,825 | 69 | 66 | |
bmz | Brucella melitensis M28 | 3,363 | 1,915 | 64 | 64 | |
bmg | Brucella melitensis M5-90 | 3,360 | 1,914 | 64 | 64 | |
bmw | Brucella melitensis NI | 3,229 | 1,922 | 61 | 60 | |
bmee | Brucella melitensis bv. 3 Ether | 3,090 | 1,904 | 64 | 64 | |
bmf | Brucella abortus 2308 | Ref | 3,034 | 1,805 | 68 | 67 |
bmb | Brucella abortus bv. 1 9-941 | 3,074 | 1,798 | 64 | 64 | |
bmc | Brucella abortus S19 | 3,000 | 1,865 | 69 | 66 | |
baa | Brucella abortus A13334 | 3,338 | 1,904 | 63 | 63 | |
babo | Brucella abortus bv. 2 86/8/59 | 3,104 | 1,908 | 64 | 64 | |
babr | Brucella abortus bv. 6 870 | 3,086 | 1,900 | 64 | 64 | |
babt | Brucella abortus 63 75 | 3,077 | 1,899 | 64 | 64 | |
babb | Brucella abortus BDW | 3,111 | 1,909 | 64 | 64 | |
babu | Brucella abortus bv. 9 C68 | 3,074 | 1,901 | 64 | 64 | |
babs | Brucella abortus BER | 3,060 | 1,896 | 63 | 63 | |
babc | Brucella abortus NCTC 10505 | 3,083 | 1,901 | 64 | 64 | |
bms | Brucella suis 1330 | Ref | 3,273 | 1,860 | ||
bsi | Brucella suis 1330 | 3,266 | 1,862 | 64 | 64 | |
bsf | Brucella suis bv. 1 | 3,230 | 1,854 | 64 | 64 | |
bsui | Brucella suis bv. 2 Bs143CITA | 3,363 | 1,908 | 63 | 63 | |
bsup | Brucella suis bv. 2 PT09143 | 3,370 | 1,907 | 63 | 63 | |
bsuv | Brucella suis bv. 2 PT09172 | 3,359 | 1,910 | 63 | 63 | |
bsuc | Brucella suis bv. 2 Bs364CITA | 3,372 | 1,911 | 63 | 63 | |
bmt | Brucella suis ATCC 23445 | 3,241 | 1,830 | 71 | 65 | |
bsz | Brucella suis bv. 3 | 3,053 | 1,899 | 64 | 64 | |
bsv | Brucella suis VBI22 | 3,270 | 1,862 | 64 | 64 | |
bsw | Brucella suis ZW043 | 3,090 | 1,984 | 59 | 59 | |
bsg | Brucella suis ZW046 | 3,124 | 2,004 | 57 | 57 | |
bov | Brucella ovis | 2,892 | 1,757 | 64 | 64 | |
bcs | Brucella canis ATCC 23365 | 3,251 | 1,861 | 68 | 66 | |
bsk | Brucella canis HSK A52141 | 3,280 | 1,893 | 62 | 62 | |
bol | Brucella canis Oliveri | 3,287 | 1,857 | |||
bcar | Brucella canis RM6/66 | 3,079 | 1,916 | 64 | 64 | |
bcas | Brucella canis SVA13 | 2,950 | 1,882 | 65 | 65 | |
bmr | Brucella microti | 3,287 | 1,904 | 65 | 65 | |
bpp | Brucella pinnipedialis B2/94 | 3,325 | 1,876 | 65 | 65 | |
bpv | Brucella pinnipedialis 6/566 | 3,095 | 1,897 | 64 | 64 | |
bcet | Brucella ceti TE10759-12 | 2,611 | 1,804 | 63 | 63 | |
bcee | Brucella ceti TE28753-12 | 2,376 | 1,560 | 63 | 63 | |
bvl | Brucella vulpis | 3,217 | 1,820 | 63 | 62 | |
bru | Brucella sp. 2002734562 | 3,078 | 1,892 | 68 | 61 | |
brj | Brucella sp. 09RB8471 | 3,080 | 1,814 | 73 | 62 | |
oin | Brucella intermedia | 4,425 | 2,554 | 73 | 61 | |
bio | Brucella inopinata | 3,215 | 1,944 | 66 | 57 | |
oan | Brucella anthropi ATCC 49188 | 4,799 | 2,758 | 73 | 73 | |
oah | Brucella anthropi OAB | 4,621 | 2,655 | 69 | 69 | |
ops | Brucella pseudogrignonensis | 4,552 | 2,617 | 80 | 79 | |
bpsn | Brucella pseudintermedia | 3,993 | 2,309 | 74 | 62 | |
bruc | Brucella sp. JSBI001 | 4,452 | 2,525 | 72 | 9 | |
brub | Brucella sp. BO3 | 3,062 | 1,888 | 67 | 2 | |
Ochrobactrum | ||||||
ocr | Ochrobactrum sp. MT180101 | 4,759 | 2,793 | 73 | 61 | |
ocl | Ochrobactrum sp. EEELCW01 | 4,303 | 2,590 | 74 | 61 | |
occ | Ochrobactrum sp. BTU1 | 5,269 | 2,545 | 83 | 17 | |
och | Ochrobactrum quorumnocens | 5,794 | 2,856 | 63 | 55 | |
Pseudochrobactrum | ||||||
pscq | Pseudochrobactrum algeriensis | 3,556 | 2,051 | 79 | 63 | |
psxf | Pseudochrobactrum sp. XF203 | 3,468 | 1,992 | 81 | 5 | |
Bradyrhizobium | ||||||
bja | Bradyrhizobium diazoefficiens USDA 110 | Ref | 8,317 | 3,684 | 55 | 51 |
bju | Bradyrhizobium japonicum USDA 6 | 8,829 | 3,787 | 59 | 58 | |
bjp | Bradyrhizobium japonicum E109 | 8,233 | 3,711 | 61 | 59 | |
bra | Bradyrhizobium sp. ORS 278 | 6,717 | 3,264 | 66 | 56 | |
bbt | Bradyrhizobium sp. BTAi1 | 7,622 | 3,762 | 72 | 56 | |
brs | Bradyrhizobium cosmicum | 6,898 | 3,275 | 53 | 52 | |
aol | Bradyrhizobium oligotrophicum | 7,228 | 3,485 | 57 | 55 | |
brc | Bradyrhizobium sp. CCGE-LA001 | 6,907 | 3,245 | 54 | 52 | |
brad | Bradyrhizobium sp. BF49 | 7,380 | 3,213 | 51 | 51 | |
bic | Bradyrhizobium icense | 7,425 | 3,323 | 60 | 53 | |
bro | Bradyrhizobium sp. ORS 285 | 6,966 | 3,430 | 69 | 54 | |
brk | Bradyrhizobium sp. SK17 | 7,427 | 3,507 | 69 | 52 | |
bot | Bradyrhizobium ottawaense | 7,741 | 3,553 | 58 | 54 | |
brq | Bradyrhizobium amphicarpaeae | 6,499 | 3,156 | 57 | 52 | |
bgq | Bradyrhizobium guangdongense | 7,648 | 3,645 | 54 | 53 | |
bgz | Bradyrhizobium guangzhouense | 7,376 | 3,572 | 53 | 52 | |
bsym | Bradyrhizobium symbiodeficiens | 6,445 | 3,069 | 59 | 51 | |
bbet | Bradyrhizobium betae | 6,780 | 3,211 | 54 | 51 | |
barh | Bradyrhizobium arachidis | 8,976 | 4,063 | 56 | 52 | |
bvz | Bradyrhizobium vignae | 8,189 | 3,482 | 99 | 51 | |
bel | Bradyrhizobium elkanii | 9,345 | 3,792 | 55 | 48 | |
bdg | Bradyrhizobium daqingense | 7,268 | 3,298 | 56 | 49 | |
bsep | Bradyrhizobium septentrionale | 9,284 | 3,831 | 70 | 50 | |
bqb | Bradyrhizobium quebecense | 7,857 | 3,455 | 58 | 51 | |
bsei | Bradyrhizobium sediminis | 5,073 | 2,420 | 55 | 26 | |
bban | Bradyrhizobium barranii subsp. barranii | 10,154 | 3,911 | 80 | 30 | |
bcan | Bradyrhizobium canariense | 7,059 | 3,194 | 54 | 27 | |
baut | Bradyrhizobium brasilense 5G1B | 8,109 | 3,556 | 61 | 24 | |
bbra | Bradyrhizobium brasilense CB627 | 8,233 | 3,629 | 58 | 25 | |
bgk | Bradyrhizobium genosp. L | 6,879 | 3,042 | 55 | 20 | |
bcou | Bradyrhizobium commune | 7,004 | 3,281 | 55 | 24 | |
bpah | Bradyrhizobium pachyrhizi | 8,094 | 3,465 | 61 | 22 | |
bxn | Bradyrhizobium xenonodulans | 7,625 | 3,485 | 58 | 23 | |
bros | Bradyrhizobium roseum | 6,804 | 3,147 | 70 | 15 | |
braz | Bradyrhizobium sp. C-145 | 8,500 | 3,658 | 56 | 19 | |
boy | Bradyrhizobium ontarionense | 7,302 | 3,440 | 66 | 10 | |
bray | Bradyrhizobium sp. 62B | 7,518 | 3,407 | 55 | 3 | |
Rhodopseudomonas | ||||||
rpa | Rhodopseudomonas palustris CGA009 | Ref | 4,920 | 2,574 | 59 | 21 |
rpb | Rhodopseudomonas palustris HaA2 | 4,683 | 2,592 | 60 | 54 | |
rpc | Rhodopseudomonas palustris BisB18 | 4,886 | 2,635 | 73 | 57 | |
rpd | Rhodopseudomonas palustris BisB5 | 4,397 | 2,380 | 74 | 58 | |
rpe | Rhodopseudomonas palustris BisA53 | 4,878 | 2,525 | 58 | 57 | |
rpt | Rhodopseudomonas palustris TIE-1 | 5,246 | 2,682 | 62 | 58 | |
rpx | Rhodopseudomonas palustris DX-1 | 4,917 | 2,601 | 60 | 57 | |
rbk | Rhodopseudomonas boonkerdii | 5,011 | 2,615 | 53 | 45 | |
rhor | Rhodopseudomonas sp. P2A-2r | 5,786 | 2,670 | 59 | 1 | |
rhol | Rhodopseudomonas sp. BAL398 | 5,771 | 2,845 | 60 | 2 | |
Nitrobacter | ||||||
nwi | Nitrobacter winogradskyi | 3,122 | 1,642 | 55 | 53 | |
nha | Nitrobacter hamburgensis | 4,326 | 2,000 | 61 | 54 | |
Afipia | ||||||
oca | Afipia carboxidovorans OM5 (Mississippi) | 3,722 | 1,940 | 48 | 47 | |
ocg | Afipia carboxidovorans OM5 (Goettingen) | 3,629 | 2,032 | 51 | 51 | |
oco | Afipia carboxidovorans OM4 | 3,574 | 1,998 | 51 | 51 | |
pcax | Pseudomonas carboxydohydrogena | 3,076 | 1,742 | 55 | 14 | |
Variibacter | ||||||
vgo | Variibacter gotjawalensis | 4,437 | 2,301 | 56 | 51 | |
Tardiphaga | ||||||
trb | Tardiphaga robiniae | 5,964 | 2,987 | 53 | 49 | |
talz | Tardiphaga alba | 5,191 | 2,462 | 58 | 8 | |
tard | Tardiphaga sp. 709 | 5,891 | 2,832 | 58 | 1 | |
Bosea | ||||||
bvv | Bosea vaviloviae | 6,101 | 3,370 | 59 | 57 | |
bves | Bosea vestrisii | 5,843 | 3,009 | 58 | 22 | |
bop | Bosea sp. PAMC 26642 | 5,084 | 2,750 | 57 | 53 | |
bos | Bosea sp. RAC05 | 5,352 | 2,807 | 79 | 75 | |
boi | Bosea sp. Tri-49 | 6,066 | 3,172 | 58 | 54 | |
bof | Bosea sp. F3-2 | 6,302 | 3,430 | 64 | 56 | |
bow | Bosea sp. NBC_00550 | 5,720 | 3,015 | 60 | 22 | |
bose | Bosea sp. 685 | 6,262 | 3,388 | 59 | 1 | |
Bartonella | ||||||
bhe | Bartonella henselae Houston-1 | 1,488 | 967 | 53 | 53 | |
bhn | Bartonella henselae BM1374163 | 1,602 | 969 | 56 | 52 | |
bhs | Bartonella henselae BM1374165 | 1,668 | 1,021 | 58 | 54 | |
bqu | Bartonella quintana Toulouse | 1,142 | 862 | 49 | 49 | |
bqr | Bartonella quintana RM-11 | 1,203 | 856 | 48 | 48 | |
bbk | Bartonella bacilliformis | 1,283 | 873 | 51 | 51 | |
btr | Bartonella tribocorum CIP 105476 | 2,154 | 1,115 | 48 | 48 | |
btx | Bartonella tribocorum BM1374166 | 2,295 | 1,104 | 56 | 52 | |
bgr | Bartonella grahamii | 1,768 | 1,063 | 49 | 49 | |
bcd | Bartonella clarridgeiae | 1,330 | 914 | 49 | 48 | |
baus | Bartonella australis | 1,264 | 895 | 48 | 48 | |
bvn | Bartonella vinsonii subsp. berkhoffii | 1,434 | 982 | 48 | 48 | |
banc | Bartonella ancashensis | 1,346 | 891 | 48 | 48 | |
bapi | Bartonella apis | 2,396 | 1,508 | 58 | 51 | |
bart | Bartonella sp. JB15 | 1,282 | 911 | 47 | 44 | |
bara | Bartonella sp. A1379B | 1,289 | 938 | 47 | 44 | |
barw | Bartonella sp. WD16.2 | 1,526 | 944 | 49 | 46 | |
barr | Bartonella sp. Raccoon60 | 1,395 | 963 | 53 | 47 | |
baro | Bartonella sp. 1-1C | 1,358 | 945 | 51 | 49 | |
barj | Bartonella sp. JB63 | 1,254 | 907 | 51 | 49 | |
bez | Bartonella elizabethae | 1,674 | 992 | 49 | 49 | |
barn | Bartonella krasnovii OE 1-1 | 1,675 | 1,019 | 52 | 51 | |
bky | Bartonella kosoy | 1,777 | 1,042 | 52 | 51 | |
bals | Bartonella alsatica | 1,242 | 922 | 52 | 51 | |
btay | Bartonella taylorii | 1,623 | 960 | 52 | 51 | |
bmac | Bartonella machadoae | 2,279 | 967 | 52 | 51 | |
bhar | Bartonella harrusi | 1,809 | 929 | 52 | 51 | |
bapa | Bartonella apihabitans | 2,228 | 1,369 | 58 | 55 | |
bsch | Bartonella schoenbuchensis | 1,345 | 920 | 53 | 3 | |
Xanthobacter | ||||||
xau | Xanthobacter autotrophicus | 5,035 | 2,686 | 59 | 58 | |
xdi | Xanthobacter dioxanivorans | 5,858 | 2,996 | 59 | 57 | |
Azorhizobium | ||||||
azc | Azorhizobium caulinodans | 4,717 | 2,723 | 65 | 64 | |
Starkeya | ||||||
star | Starkeya sp. ORNL1 | 5,764 | 3,113 | 58 | 57 | |
Labrys | ||||||
lne | Labrys sp. KNU-23 | 6,714 | 3,581 | 64 | 63 | |
Ancylobacter | ||||||
sno | Ancylobacter novellus | 4,431 | 2,522 | 52 | 51 | |
anc | Ancylobacter sp. TS-1 | 3,621 | 2,130 | 58 | 57 | |
apra | Ancylobacter pratisalsi | 4,322 | 2,523 | 59 | 58 | |
apol | Ancylobacter polymorphus | 4,818 | 2,622 | 61 | 57 | |
Aquabacter | ||||||
aqi | Aquabacter sp. L1I39 | 4,783 | 2,718 | 54 | ||
Methylorubrum | ||||||
mea | Methylorubrum extorquens AM1 | 6,234 | 2,607 | 86 | 79 | |
mdi | Methylorubrum extorquens DM4 | 5,741 | 2,617 | 88 | 73 | |
mex | Methylorubrum extorquens PA1 | 4,829 | 2,387 | 75 | 75 | |
mch | Methylorubrum extorquens CM4 | 5,516 | 2,568 | 79 | 78 | |
mpo | Methylorubrum populi | 5,365 | 2,560 | 76 | 74 | |
mza | Methylorubrum zatmanii | 4,953 | 2,404 | 77 | 76 | |
metq | Methylorubrum sp. GM97 | 5,016 | 2,335 | 78 | 2 | |
Methylobacterium | ||||||
mrd | Methylobacterium radiotolerans | 6,431 | 2,959 | 81 | 80 | |
met | Methylobacterium sp. 4-46 | 6,692 | 3,165 | 83 | 82 | |
mno | Methylobacterium nodulans | 8,309 | 3,360 | 96 | 93 | |
mor | Methylobacterium oryzae | 6,274 | 2,728 | 69 | 68 | |
meta | Methylobacterium sp. AMS5 | 5,178 | 2,427 | 76 | 75 | |
maqu | Methylobacterium aquaticum | 7,289 | 3,227 | 131 | 130 | |
mphy | Methylobacterium phyllosphaerae | 5,796 | 2,700 | 69 | 68 | |
mee | Methylobacterium currus | 6,692 | 3,206 | 132 | 129 | |
metd | Methylobacterium sp. DM1 | 5,189 | 2,404 | 79 | 76 | |
metx | Methylobacterium sp. XJLW | 5,860 | 2,774 | 72 | 71 | |
mets | Methylobacterium durans | 5,663 | 2,324 | 74 | 71 | |
meti | Methylobacterium radiodurans | 4,922 | 2,463 | 83 | 82 | |
mmes | Methylobacterium mesophilicum | 5,970 | 2,715 | 58 | 55 | |
mtea | Methylobacterium terrae | 5,407 | 2,758 | 116 | 115 | |
mind | Methylobacterium indicum | 6,594 | 3,091 | 150 | 133 | |
mog | Methylobacterium organophilum | 4,839 | 2,332 | 79 | 78 | |
mtad | Methylobacterium tardum | 6,052 | 2,350 | 78 | 76 | |
mecl | Methylobacterium sp. CLZ | 4,749 | 2,274 | 77 | 2 | |
mfuj | Methylobacterium fujisawaense | 6,516 | 2,794 | 75 | ||
meni | Methylobacterium sp. NI91 | 4,744 | 2,290 | 77 | 1 | |
mens | Methylobacterium sp. NMS14P | 6,392 | 2,801 | 79 | ||
Microvirga | ||||||
moc | Microvirga ossetica | 8,755 | 3,720 | 85 | 83 | |
miv | Microvirga sp. 17 mud 1-3 | 4,001 | 2,276 | 69 | 68 | |
mico | Microvirga thermotolerans | 3,502 | 2,016 | 61 | 60 | |
mtez | Microvirga terrae | 5,505 | 2,659 | 80 | 29 | |
mld | Microvirga lotononidis | 6,723 | 3,133 | 93 | 34 | |
Beijerinckia | ||||||
bid | Beijerinckia indica | 3,784 | 1,975 | 64 | 63 | |
Methylocella | ||||||
msl | Methylocella silvestris | 3,818 | 2,050 | 58 | 57 | |
mtun | Methylocella tundrae | 4,868 | 2,092 | 86 | 60 | |
Methylovirgula | ||||||
mlg | Methylovirgula ligni | 3,127 | 1,700 | 52 | 51 | |
Methylocapsa | ||||||
medk | Methylocapsa sp. D3K7 | 3,701 | 1,722 | 56 | 52 | |
unclassified Beijerinckiaceae | ||||||
bbar | Beijerinckiaceae bacterium RH AL1 | 4,263 | 2,046 | 60 | 51 | |
bbai | Beijerinckiaceae bacterium MG08 | 3,057 | 1,628 | 53 | 2 | |
Rhodoblastus | ||||||
rhj | Rhodoblastus sp. SSC7 | 2,824 | 1,518 | 52 | 47 | |
Chelatococcus | ||||||
chel | Chelatococcus sp. CO-6 | 4,564 | 2,749 | 55 | 55 | |
cdq | Chelatococcus daeguensis | 3,753 | 2,325 | 58 | 57 | |
Hyphomicrobium | ||||||
hdn | Hyphomicrobium denitrificans ATCC 51888 | 3,512 | 1,793 | 52 | 51 | |
hdt | Hyphomicrobium denitrificans 1NES1 | 3,842 | 1,844 | 48 | 48 | |
hmc | Hyphomicrobium sp. MC1 | 4,893 | 2,267 | 61 | 53 | |
hni | Hyphomicrobium nitrativorans | 3,331 | 1,680 | 53 | 51 | |
Rhodomicrobium | ||||||
rva | Rhodomicrobium vannielii | 3,565 | 1,988 | 58 | 57 | |
rlac | Rhodomicrobium lacus | 3,268 | 1,854 | 58 | 57 | |
Filomicrobium | ||||||
fil | Candidatus Filomicrobium marinum W | 4,057 | 1,956 | 59 | 49 | |
fiy | Candidatus Filomicrobium marinum Y | 4,045 | 1,954 | 59 | 50 | |
Rhodoplanes | ||||||
rhz | Rhodoplanes sp. Z2-YC6860 | 7,042 | 3,335 | 48 | 48 | |
Methyloceanibacter | ||||||
mcg | Methyloceanibacter caenitepidi | 3,342 | 1,651 | 48 | 48 | |
Methyloligella | ||||||
metg | Methyloligella sp. GL2 | 2,938 | 1,712 | 52 | 51 | |
Pelagibacterium | ||||||
phl | Pelagibacterium halotolerans | 3,881 | 2,164 | 53 | 53 | |
pem | Pelagibacterium flavum | 3,809 | 1,967 | 56 | 52 | |
Devosia | ||||||
deq | Devosia sp. H5989 | 4,296 | 2,433 | 54 | 54 | |
dei | Devosia sp. I507 | 3,814 | 2,226 | 58 | 56 | |
dea | Devosia ginsengisoli | 4,138 | 2,276 | 51 | 50 | |
dsal | Devosia salina | 4,144 | 2,213 | 59 | 57 | |
devo | Devosia sp. MC521 | 3,515 | 1,794 | 103 | 101 | |
dnp | Devosia neptuniae | 4,521 | 2,395 | 58 | 26 | |
doy | Devosia oryziradicis | 3,409 | 1,848 | 52 | 25 | |
drh | Devosia rhizoryzae | 3,398 | 1,909 | 52 | 24 | |
dag | Devosia algicola | 3,256 | 1,533 | 56 | 24 | |
drp | Devosia rhodophyticola | 3,212 | 1,842 | 57 | 27 | |
devd | Devosia sp. D6-9 | 4,288 | 2,348 | 57 | ||
dri | Devosia rhizosphaerae | 3,801 | 2,036 | 58 | ||
Maritalea | ||||||
mmyr | Maritalea myrionectae | 3,696 | 2,048 | 46 | 46 | |
Paradevosia | ||||||
yti | Paradevosia tibetensis | 4,245 | 2,436 | 58 | 57 | |
Mariluticola | ||||||
mhar | Mariluticola halotolerans | 3,196 | 1,962 | 57 | 56 | |
Blastochloris | ||||||
bvr | Blastochloris viridis | 3,260 | 1,876 | 62 | 58 | |
blag | Blastochloris tepida | 3,606 | 1,943 | 62 | 55 | |
Methylocystis | ||||||
msc | Methylocystis sp. SC2 | 3,666 | 1,802 | 50 | 50 | |
mbry | Methylocystis bryophila | 4,285 | 2,012 | 57 | 56 | |
mros | Methylocystis rosea | 3,888 | 1,998 | 55 | 54 | |
mhey | Methylocystis heyeri | 4,128 | 2,018 | 66 | 65 | |
mpar | Methylocystis parvus | 4,165 | 2,057 | 58 | 57 | |
miwa | Methylocystis iwaonis | 4,276 | 1,986 | 64 | 60 | |
mesz | Methylocystis sp. SB2 | 3,292 | 1,648 | 55 | 1 | |
Methylosinus | ||||||
mtw | Methylosinus trichosporium | 4,565 | 2,133 | 66 | 63 | |
mecq | Methylosinus sp. C49 | 4,317 | 2,047 | 65 | 45 | |
Chenggangzhangella | ||||||
cmet | Chenggangzhangella methanolivorans | 4,356 | 1,681 | 64 | 55 | |
Pleomorphomonas | ||||||
pleo | Pleomorphomonas sp. SM30 | 4,498 | 2,482 | 77 | 54 | |
Hartmannibacter | ||||||
hdi | Hartmannibacter diazotrophicus | 4,981 | 2,762 | 56 | 49 | |
Martelella | ||||||
mey | Martelella endophytica | 4,028 | 2,440 | 62 | 62 | |
maad | Martelella sp. AD-3 | 4,523 | 2,717 | 64 | 63 | |
mmed | Martelella mediterranea | 5,180 | 3,021 | 64 | 54 | |
mlut | Martelella lutilitoris | 4,409 | 2,590 | 66 | 52 | |
Aureimonas | ||||||
aua | Aureimonas sp. AU20 | 4,784 | 2,563 | 58 | 58 | |
aala | Aureimonas sp. OT7 | 3,875 | 2,345 | 64 | 52 | |
aalm | Aureimonas altamirensis | 4,289 | 2,461 | 64 | 51 | |
auz | Aureimonas sp. SA4125 | 4,829 | 2,419 | 59 | 52 | |
Aurantimonas | ||||||
aub | Aurantimonas sp. HBX-1 | 4,078 | 2,280 | 57 | 51 | |
Jiella | ||||||
jie | Jiella pelagia | 4,832 | 2,056 | 59 | 14 | |
Antarcticirhabdus | ||||||
jav | Antarcticirhabdus aurantiaca | 5,558 | 2,640 | 69 | 19 | |
Hodgkinia | ||||||
hci | Candidatus Hodgkinia cicadicola Dsem | 169 | 128 | 18 | 17 | |
hct | Candidatus Hodgkinia cicadicola TETULN | 170 | 131 | 23 | 22 | |
hcc | Candidatus Hodgkinia cicadicola TETUND1 | 121 | 91 | 17 | 13 | |
hcd | Candidatus Hodgkinia cicadicola TETUND2 | 140 | 109 | 22 | 21 | |
Tokpelaia | ||||||
thd | Candidatus Tokpelaia hoelldoblerii | 1,685 | 1,179 | 52 | 48 | |
Pseudorhodoplanes | ||||||
psin | Pseudorhodoplanes sinuspersici | 5,632 | 2,772 | 55 | 51 | |
Nordella | ||||||
noh | Nordella sp. HKS 07 | 6,484 | 3,265 | 62 | 59 | |
Terrihabitans | ||||||
tso | Terrihabitans soli | 3,166 | 1,667 | 51 | 45 | |
unclassified Rhizobiales | ||||||
rbm | Rhizobiales bacterium NRL2 | 4,323 | 2,262 | 56 | 56 | |
Breoghania | ||||||
brn | Breoghania sp. L-A4 | 4,096 | 2,210 | 59 | 53 | |
Pseudovibrio | ||||||
psf | Pseudovibrio sp. FO-BEG1 | 5,468 | 2,799 | 87 | 87 | |
Pannonibacter | ||||||
pphr | Pannonibacter phragmitetus | 4,997 | 2,924 | 64 | 64 | |
Labrenzia | ||||||
lap | Labrenzia sp. CP4 | 5,317 | 2,974 | 63 | 62 | |
labr | Labrenzia sp. VG12 | 5,346 | 2,870 | 74 | 72 | |
labp | Labrenzia sp. PHM005 | 5,480 | 3,039 | 64 | 62 | |
labt | Labrenzia sp. THAF35 | 6,264 | 3,321 | 73 | 64 | |
Roseibium | ||||||
lagg | Roseibium aggregatum | 6,050 | 3,311 | 66 | 64 | |
rpop | Roseibium porphyridii | 5,411 | 2,881 | 66 | 22 | |
Stappia | ||||||
siw | Stappia indica | 4,559 | 2,658 | 61 | 57 | |
Phreatobacter | ||||||
phr | Phreatobacter cathodiphilus | 4,220 | 2,386 | 58 | 57 | |
pstg | Phreatobacter stygius | 6,802 | 3,543 | 60 | 59 | |
paqt | Phreatobacter aquaticus | 4,645 | 2,485 | 58 | 15 | |
Lichenihabitans | ||||||
liz | Lichenihabitans sp. PAMC28606 | 3,830 | 2,076 | 65 | 64 | |
Acuticoccus | ||||||
acut | Acuticoccus sp. I52.16.1 | 4,827 | 2,708 | 57 | 55 | |
Methyloraptor | ||||||
mflg | Methyloraptor flagellatus | 4,302 | 2,363 | 64 | ||
Caulobacter | ||||||
ccr | Caulobacter vibrioides CB15 | Ref | 3,737 | 1,903 | 57 | 57 |
ccs | Caulobacter vibrioides NA1000 | 3,886 | 1,974 | 198 | 59 | |
cak | Caulobacter sp. K31 | 5,438 | 2,628 | 58 | 57 | |
cse | Caulobacter segnis | 4,139 | 2,151 | 60 | 59 | |
chq | Caulobacter henricii | 3,616 | 1,899 | 57 | 57 | |
cmb | Caulobacter mirabilis | 4,251 | 2,042 | 55 | 55 | |
cfh | Caulobacter flavus | 4,989 | 2,458 | 67 | 66 | |
cauf | Caulobacter sp. FWC26 | 4,433 | 2,250 | 62 | 61 | |
Phenylobacterium | ||||||
pzu | Phenylobacterium zucineum | 3,854 | 2,126 | 45 | 45 | |
phb | Phenylobacterium parvum | 2,597 | 1,503 | 51 | 50 | |
caul | Phenylobacterium montanum | 5,079 | 2,300 | 57 | 55 | |
Brevundimonas | ||||||
bsb | Brevundimonas subvibrioides | 3,327 | 1,709 | 56 | 54 | |
brd | Brevundimonas sp. DS20 | 3,305 | 1,817 | 54 | 54 | |
bne | Brevundimonas naejangsanensis | 2,754 | 1,592 | 59 | 58 | |
brg | Brevundimonas sp. GW460-12-10-14-LB2 | 3,139 | 1,671 | 59 | 58 | |
brl | Brevundimonas sp. LM2 | 3,403 | 1,782 | 55 | 55 | |
bvc | Brevundimonas vesicularis | 3,281 | 1,696 | 62 | 59 | |
bdm | Brevundimonas diminuta | 3,375 | 1,782 | 61 | 59 | |
brf | Brevundimonas sp. MF30-B | 2,757 | 1,481 | 51 | 49 | |
brev | Brevundimonas sp. SGAir0440 | 3,033 | 1,643 | 58 | 57 | |
bmed | Brevundimonas mediterranea | 3,224 | 1,813 | 62 | 57 | |
bvy | Brevundimonas vancanneytii | 3,406 | 1,816 | 63 | 56 | |
bnd | Brevundimonas nasdae | 3,618 | 1,871 | 66 | 64 | |
bpon | Brevundimonas pondensis | 3,360 | 1,706 | 58 | 57 | |
bgoe | Brevundimonas goettingensis | 3,793 | 1,764 | 57 | 55 | |
bvit | Brevundimonas vitisensis | 2,940 | 1,509 | 56 | 55 | |
balb | Brevundimonas albigilva | 3,245 | 1,656 | 58 | 58 | |
bfq | Brevundimonas fontaquae | 3,159 | 1,678 | 58 | 57 | |
bres | Brevundimonas sp. 'scallop' | 2,951 | 1,590 | 58 | 57 | |
brea | Brevundimonas sp. AJA228-03 | 2,931 | 1,548 | 50 | 49 | |
bbul | Brevundimonas bullata | 3,266 | 1,732 | 67 | 2 | |
breu | Brevundimonas sp. M20 | 3,161 | 1,614 | 56 | ||
bsta | Brevundimonas staleyi | 4,044 | 1,893 | 55 | ||
bir | Brevundimonas intermedia | 3,439 | 1,770 | 60 | ||
Asticcacaulis | ||||||
aex | Asticcacaulis excentricus | 3,763 | 2,011 | 61 | 60 | |
asti | Asticcacaulis sp. ZE23SCel15 | 3,369 | 1,702 | 57 | 10 | |
astd | Asticcacaulis sp. DW145 | 3,708 | 1,887 | 61 | 1 | |
astm | Asticcacaulis sp. MM231 | 4,311 | 1,921 | 62 | 1 | |
Terricaulis | ||||||
tsv | Terricaulis silvestris | 3,942 | 1,764 | 54 | 48 | |
Aquidulcibacter | ||||||
apah | Aquidulcibacter paucihalophilus | 3,008 | 1,521 | 50 | 49 | |
Ruegeria | ||||||
sil | Ruegeria pomeroyi | 4,279 | 2,472 | 64 | 64 | |
sit | Ruegeria sp. TM1040 | 3,864 | 2,202 | 80 | 80 | |
rua | Ruegeria sp. AD91A | 4,229 | 2,415 | 64 | 63 | |
rut | Ruegeria sp. THAF33 | 4,509 | 2,554 | 64 | 62 | |
rcon | Ruegeria conchae | 4,415 | 2,197 | 64 | 63 | |
ruy | Ruegeria sp. YS9 | 4,129 | 2,294 | 64 | ||
Jannaschia | ||||||
jan | Jannaschia sp. CCS1 | 4,283 | 2,301 | 48 | 48 | |
jov | Jannaschia ovalis | 3,314 | 1,835 | 50 | ||
Roseobacter | ||||||
rde | Roseobacter denitrificans | 4,129 | 2,368 | 42 | 42 | |
rli | Roseobacter litoralis | 4,537 | 2,547 | 40 | 40 | |
rpon | Roseobacter ponti | 3,740 | 2,175 | 48 | 46 | |
rfu | Roseobacter fucihabitans | 4,817 | 2,468 | 44 | ||
Dinoroseobacter | ||||||
dsh | Dinoroseobacter shibae | 4,194 | 2,429 | 50 | 50 | |
Ketogulonicigenium | ||||||
kvl | Ketogulonicigenium vulgare WSH-001 | 3,054 | 1,833 | 71 | 71 | |
kvu | Ketogulonicigenium vulgare Y25 | 3,213 | 1,911 | 74 | 74 | |
kro | Ketogulonicigenium robustum | 2,682 | 1,698 | 79 | 79 | |
Phaeobacter | ||||||
pga | Phaeobacter inhibens DSM 17395 | 3,875 | 2,251 | 69 | 69 | |
pgl | Phaeobacter inhibens 2.10 | 3,723 | 2,237 | 69 | 69 | |
pgd | Phaeobacter gallaeciensis DSM 26640 | 4,359 | 2,441 | 75 | 73 | |
php | Phaeobacter porticola | 3,965 | 2,232 | 74 | 72 | |
ppic | Phaeobacter piscinae | 3,836 | 2,250 | 77 | 73 | |
phq | Phaeobacter sp. LSS9 | 3,703 | 2,190 | 72 | 72 | |
phae | Phaeobacter sp. G2 | 4,510 | 2,421 | 78 | ||
Octadecabacter | ||||||
oat | Octadecabacter antarcticus | 4,492 | 2,399 | 48 | 48 | |
oar | Octadecabacter arcticus | 4,683 | 2,746 | 49 | 48 | |
otm | Octadecabacter temperatus | 3,281 | 1,892 | 43 | 43 | |
oct | Octadecabacter sp. SW4 | 3,356 | 1,947 | 46 | 46 | |
Leisingera | ||||||
lmd | Leisingera methylohalidivorans | 4,530 | 2,399 | 78 | 78 | |
lej | Leisingera sp. NJS204 | 4,534 | 2,547 | 73 | 73 | |
laqu | Leisingera aquaemixtae | 4,093 | 2,379 | 70 | 70 | |
lev | Leisingera sp. NJS201 | 4,293 | 2,219 | 75 | 73 | |
lcae | Leisingera caerulea | 4,297 | 2,354 | 73 | 72 | |
leim | Leisingera sp. M523 | 3,868 | 2,105 | 69 | 1 | |
Celeribacter | ||||||
cid | Celeribacter indicus | 4,827 | 2,742 | 54 | 54 | |
cmar | Celeribacter marinus | 3,155 | 1,785 | 51 | 51 | |
ceh | Celeribacter ethanolicus | 3,985 | 2,262 | 62 | 62 | |
cbak | Celeribacter baekdonensis | 4,080 | 2,203 | 62 | 6 | |
Marinovum | ||||||
malg | Marinovum algicola | 5,005 | 2,846 | 54 | 53 | |
Actibacterium | ||||||
con | Actibacterium sp. EMB200-NS6 | 3,690 | 2,227 | 53 | 52 | |
Alloyangia | ||||||
ypac | Alloyangia pacifica | 4,695 | 2,757 | 73 | 73 | |
Salipiger | ||||||
yan | Salipiger sp. CCB-MM3 | 4,938 | 2,878 | 72 | 72 | |
tpro | Salipiger profundus | 5,205 | 2,834 | 64 | 64 | |
paby | Salipiger abyssi | 5,099 | 2,746 | 50 | 50 | |
Sulfitobacter | ||||||
suam | Sulfitobacter alexandrii | 4,383 | 2,453 | 53 | 53 | |
sulz | Sulfitobacter sp. SK012 | 4,848 | 2,517 | 44 | 44 | |
suli | Sulfitobacter sp. JL08 | 4,093 | 2,244 | 45 | 44 | |
suld | Sulfitobacter sp. D7 | 3,744 | 2,239 | 63 | 62 | |
sdo | Sulfitobacter donghicola | 2,236 | 1,469 | 80 | 79 | |
spot | Sulfitobacter pontiacus | 3,356 | 2,031 | 60 | 59 | |
smed | Sulfitobacter mediterraneus | 4,050 | 2,208 | 52 | 52 | |
sinl | Sulfitobacter indolifex | 4,371 | 2,318 | 76 | 64 | |
sfav | Sulfitobacter faviae | 3,459 | 2,002 | 65 | 63 | |
sual | Sulfitobacter albidus | 3,395 | 1,803 | 52 | 51 | |
sdub | Sulfitobacter dubius | 3,668 | 2,083 | 59 | 4 | |
sulb | Sulfitobacter sp. CB2047 | 3,633 | 2,065 | 59 | ||
suly | Sulfitobacter sp. TCYB15 | 3,438 | 2,009 | 59 | ||
sulp | Sulfitobacter sp. PM12 | 3,685 | 2,101 | 60 | ||
susq | Sulfitobacter sp. S190 | 3,817 | 2,095 | 53 | ||
Pseudosulfitobacter | ||||||
spse | Pseudosulfitobacter pseudonitzschiae | 4,938 | 2,743 | 67 | 49 | |
Tateyamaria | ||||||
tom | Tateyamaria omphalii | 4,121 | 2,251 | 46 | 46 | |
Roseovarius | ||||||
rmm | Roseovarius mucosus | 4,178 | 2,354 | 58 | 54 | |
rok | Roseovarius sp. AK1035 | 4,071 | 2,302 | 50 | 50 | |
rid | Roseovarius indicus | 5,942 | 3,051 | 56 | 47 | |
rom | Roseovarius faecimaris | 3,744 | 2,108 | 50 | 50 | |
roh | Roseovarius sp. THAF27 | 4,374 | 2,357 | 49 | 47 | |
rpel | Roseovarius pelagicus | 4,007 | 2,224 | 48 | 7 | |
rphc | Roseovarius phycicola | 3,540 | 1,916 | 57 | ||
rrl | Roseovarius rhodophyticola | 3,604 | 1,869 | 49 | ||
Antarctobacter | ||||||
aht | Antarctobacter heliothermus | 5,019 | 2,729 | 64 | 53 | |
Sagittula | ||||||
sagu | Sagittula sp. P11 | 5,162 | 2,821 | 54 | 54 | |
sstl | Sagittula stellata | 4,889 | 2,624 | 55 | ||
Thalassococcus | ||||||
thaa | Thalassococcus sp. S3 | 4,727 | 2,531 | 49 | 49 | |
Oceanicola | ||||||
ocd | Oceanicola sp. D3 | 3,996 | 2,160 | 50 | 50 | |
Roseivivax | ||||||
rot | Roseivivax sp. THAF197b | 4,013 | 2,225 | 59 | 56 | |
rmh | Roseivivax marinus | 4,184 | 2,053 | 55 | 55 | |
Mameliella | ||||||
malu | Mameliella alba | 6,009 | 3,072 | 71 | 62 | |
Thalassovita | ||||||
tgl | Thalassovita gelatinovora | 3,748 | 2,173 | 61 | 60 | |
tmd | Thalassovita mediterranea | 3,131 | 1,561 | 52 | 48 | |
Falsihalocynthiibacter | ||||||
hat | Falsihalocynthiibacter arcticus | 3,944 | 2,161 | 57 | 57 | |
Ponticoccus | ||||||
palx | Ponticoccus alexandrii | 4,583 | 2,505 | 54 | 54 | |
Loktanella | ||||||
lsal | Loktanella salsilacus | 3,690 | 2,165 | 68 | 67 | |
Lentibacter | ||||||
lalg | Lentibacter algarum | 2,927 | 1,687 | 51 | 49 | |
Tropicibacter | ||||||
try | Tropicibacter oceani | 3,873 | 2,061 | 61 | 61 | |
Palleronia | ||||||
plcg | Palleronia sp. LCG004 | 3,623 | 2,121 | 57 | 6 | |
maru | Palleronia sp. THAF1 | 3,319 | 1,938 | 56 | 54 | |
Roseicyclus | ||||||
rmai | Roseicyclus marinus | 3,410 | 1,990 | 45 | 5 | |
red | Roseicyclus elongatus | 3,448 | 1,921 | 51 | 51 | |
Aliisedimentitalea | ||||||
asca | Aliisedimentitalea scapharcae | 4,592 | 2,489 | 61 | ||
Algirhabdus | ||||||
acld | Algirhabdus cladophorae | 3,703 | 2,034 | 44 | ||
Cereibacter | ||||||
rsp | Cereibacter sphaeroides 2.4.1 | Ref | 4,287 | 2,433 | 67 | 66 |
rsh | Cereibacter sphaeroides ATCC 17029 | 4,132 | 2,440 | 70 | 68 | |
rsq | Cereibacter sphaeroides ATCC 17025 | 4,333 | 2,461 | 68 | 68 | |
rsk | Cereibacter sphaeroides KD131 | 4,569 | 2,577 | 66 | 66 | |
cazt | Cereibacter azotoformans | 4,139 | 2,360 | 70 | 70 | |
Pseudogemmobacter | ||||||
rbl | Pseudogemmobacter blasticus | 3,488 | 2,131 | 56 | 55 | |
Fuscovulum | ||||||
fyt | Fuscovulum ytuae | 3,921 | 2,327 | 57 | 10 | |
Paracoccus | ||||||
pde | Paracoccus denitrificans | Ref | 5,077 | 2,785 | 51 | 51 |
pami | Paracoccus aminophilus | 4,528 | 2,508 | 71 | 71 | |
pye | Paracoccus yeei | 4,381 | 2,544 | 65 | 64 | |
pcon | Paracoccus contaminans | 2,748 | 1,651 | 56 | 55 | |
pzh | Paracoccus zhejiangensis | 4,311 | 2,469 | 54 | 54 | |
paro | Paracoccus tegillarcae | 3,776 | 2,187 | 54 | 54 | |
paru | Paracoccus jeotgali | 2,992 | 1,856 | 54 | 54 | |
pamn | Paracoccus aminovorans | 3,802 | 2,118 | 60 | 59 | |
pmut | Paracoccus mutanolyticus | 2,335 | 1,131 | 62 | 61 | |
pars | Paracoccus suum | 3,040 | 1,890 | 54 | 53 | |
parr | Paracoccus sp. Arc7-R13 | 3,835 | 2,257 | 61 | 61 | |
paak | Paracoccus sp. AK26 | 3,453 | 2,000 | 61 | 61 | |
pkd | Paracoccus kondratievae | 3,981 | 2,397 | 64 | 63 | |
ppan | Paracoccus pantotrophus | 4,076 | 2,463 | 63 | 63 | |
plia | Paracoccus liaowanqingii | 4,394 | 2,494 | 65 | 64 | |
psan | Paracoccus sanguinis | 3,094 | 1,871 | 57 | 56 | |
pmau | Paracoccus marcusii | 3,923 | 2,248 | 67 | 62 | |
pmeh | Paracoccus methylovorus | 4,173 | 2,340 | 64 | 63 | |
psew | Paracoccus seriniphilus | 3,911 | 2,279 | 61 | 61 | |
psap | Paracoccus saliphilus | 4,298 | 2,517 | 55 | 55 | |
pfis | Paracoccus fistulariae | 3,560 | 2,026 | 56 | 56 | |
paex | Paracoccus aestuarii | 3,470 | 2,053 | 62 | 61 | |
pstl | Paracoccus stylophorae | 3,457 | 1,927 | 57 | 56 | |
palp | Paracoccus alcaliphilus | 4,507 | 2,349 | 56 | 56 | |
pver | Paracoccus versutus | 4,695 | 2,497 | 65 | 63 | |
paez | Paracoccus aerodenitrificans | 3,372 | 1,925 | 56 | 13 | |
pals | Paracoccus albus | 3,588 | 2,095 | 56 | 13 | |
pdim | Paracoccus sediminicola | 3,377 | 1,972 | 57 | 12 | |
pfeo | Paracoccus ferrooxidans | 4,563 | 2,641 | 64 | 11 | |
Planktomarina | ||||||
ptp | Planktomarina temperata | 3,033 | 1,921 | 47 | 47 | |
Rhodovulum | ||||||
rsu | Rhodovulum sulfidophilum | 4,520 | 2,439 | 59 | 59 | |
rhm | Rhodovulum sp. MB263 | 3,727 | 2,214 | 61 | 61 | |
rhc | Rhodovulum sp. P5 | 4,311 | 2,295 | 58 | 58 | |
Tritonibacter | ||||||
rmb | Tritonibacter mobilis | 4,477 | 2,477 | 71 | 71 | |
tsco | Tritonibacter scottomollicae | 4,258 | 2,293 | 73 | 11 | |
Frigidibacter | ||||||
daa | Frigidibacter mobilis | 5,077 | 2,702 | 52 | 52 | |
Marivivens | ||||||
don | Marivivens sp. JLT3646 | 3,045 | 1,882 | 62 | 62 | |
malc | Marivivens sp. LCG002 | 3,021 | 1,817 | 64 | 1 | |
Aestuarium | ||||||
rbz | Aestuarium zhoushanense | 3,227 | 1,937 | 63 | 63 | |
Thioclava | ||||||
thw | Thioclava nitratireducens | 3,963 | 2,368 | 63 | 57 | |
tec | Thioclava electrotropha | 4,049 | 2,395 | 64 | 55 | |
tlb | Thioclava litoralis | 3,628 | 2,061 | 80 | ||
Yoonia | ||||||
lvs | Yoonia vestfoldensis | 3,936 | 2,253 | 71 | 53 | |
yphy | Yoonia phaeophyticola | 3,936 | 2,022 | 55 | 1 | |
yag | Yoonia algicola | 3,460 | 1,907 | 52 | ||
yrh | Yoonia rhodophyticola | 4,295 | 2,174 | 44 | 1 | |
Paragemmobacter | ||||||
geh | Paragemmobacter aquarius | 3,833 | 2,241 | 63 | 55 | |
Gemmobacter | ||||||
gfu | Gemmobacter fulvus | 4,383 | 2,492 | 61 | 51 | |
Tabrizicola | ||||||
taw | Tabrizicola piscis | 4,121 | 2,335 | 55 | 52 | |
Silicimonas | ||||||
salo | Silicimonas algicola | 4,169 | 2,213 | 48 | 47 | |
Parasedimentitalea | ||||||
sedi | Parasedimentitalea marina | 4,658 | 2,504 | 85 | 72 | |
ppso | Parasedimentitalea psychrophila | 4,494 | 2,355 | 95 | 5 | |
Haematobacter | ||||||
hml | Haematobacter massiliensis | 3,841 | 2,350 | 61 | 60 | |
Rhodophyticola | ||||||
boo | Rhodophyticola sp. CCM32 | 3,546 | 2,052 | 47 | 47 | |
Pseudorhodobacter | ||||||
pseb | Pseudorhodobacter turbinis | 3,812 | 2,279 | 66 | 54 | |
Qingshengfaniella | ||||||
lit | Qingshengfaniella alkalisoli | 3,581 | 2,238 | 63 | 54 | |
Paroceanicella | ||||||
ppru | Paroceanicella profunda | 4,673 | 2,665 | 70 | 60 | |
Pseudohalocynthiibacter | ||||||
paed | Pseudohalocynthiibacter aestuariivivens | 4,238 | 2,419 | 48 | 48 | |
Profundibacter | ||||||
pamo | Profundibacter amoris | 3,459 | 1,953 | 54 | 51 | |
Pontivivens | ||||||
poz | Pontivivens ytuae | 4,087 | 2,213 | 54 | 42 | |
mon | Pontivivens nitratireducens | 3,329 | 2,017 | 53 | 45 | |
Pseudooceanicola | ||||||
palw | Pseudooceanicola algae | 3,776 | 2,224 | 62 | 50 | |
pshq | Pseudooceanicola spongiae | 3,958 | 2,385 | 62 | 54 | |
Pelagovum | ||||||
ppaf | Pelagovum pacificum | 3,951 | 2,172 | 56 | 50 | |
Polymorphum | ||||||
pgv | Polymorphum gilvum | 4,393 | 2,508 | 56 | 56 | |
Cognatishimia | ||||||
cact | Cognatishimia activa | 3,143 | 1,899 | 59 | 47 | |
Pukyongiella | ||||||
thas | Pukyongiella litopenaei | 4,010 | 2,352 | 48 | 48 | |
Pikeienuella | ||||||
hdh | Pikeienuella piscinae | 4,043 | 2,283 | 51 | 48 | |
Pacificitalea | ||||||
cmag | Pacificitalea manganoxidans | 3,524 | 2,127 | 57 | 56 | |
Falsirhodobacter | ||||||
fap | Falsirhodobacter algicola | 2,643 | 1,712 | 63 | 56 | |
Gymnodinialimonas | ||||||
gce | Gymnodinialimonas ceratoperidinii | 3,428 | 1,942 | 48 | 46 | |
gyj | Gymnodinialimonas sp. 57CJ19 | 3,692 | 2,013 | 47 | ||
Neotabrizicola | ||||||
nsm | Neotabrizicola shimadae | 4,149 | 2,264 | 57 | 47 | |
Aliiroseovarius | ||||||
acro | Aliiroseovarius crassostreae | 3,127 | 1,715 | 61 | 42 | |
Abyssibius | ||||||
aalk | Abyssibius alkaniclasticus | 3,099 | 1,814 | 56 | 33 | |
Amylibacter | ||||||
amyl | Amylibacter sp. IMCC11727 | 3,403 | 1,775 | 45 | 12 | |
Algicella | ||||||
amaq | Algicella marina | 3,845 | 1,931 | 53 | 49 | |
Fontisubflavum | ||||||
rhoc | Fontisubflavum oceani | 3,260 | 1,688 | 48 | 37 | |
Roseinatronobacter | ||||||
pbae | Roseinatronobacter sp. S2 | 4,133 | 2,423 | 58 | 16 | |
rbg | Roseinatronobacter bogoriensis subsp. barguzinensis | 3,624 | 2,169 | 59 | 58 | |
Limimaricola | ||||||
lvr | Limimaricola variabilis | 4,033 | 2,184 | 69 | 13 | |
Boseongicola | ||||||
bosg | Boseongicola sp. MH-Pat-all_autometa_1-3 | 3,443 | 1,848 | 46 | 3 | |
Marinibacterium | ||||||
manh | Marinibacterium anthonyi | 6,382 | 3,364 | 63 | ||
unclassified Paracoccaceae | ||||||
faq | Rhodobacteraceae bacterium SC52 | 3,534 | 2,101 | 61 | 55 | |
Paenirhodobacter | ||||||
sinr | Sinirhodobacter sp. HNIBRBA609 | 3,050 | 1,793 | 63 | 33 | |
Rhodobacter | ||||||
rcp | Rhodobacter capsulatus | 3,642 | 2,116 | 66 | 66 | |
rhp | Rhodobacter xanthinilyticus | 3,529 | 2,020 | 64 | 64 | |
unclassified Rhodobacterales | ||||||
rbx | Rhodobacterales bacterium HKCCA1288 | 2,556 | 1,634 | 48 | 9 | |
Maricaulis | ||||||
mmr | Maricaulis maris | 3,063 | 1,652 | 54 | 54 | |
Glycocaulis | ||||||
gak | Glycocaulis alkaliphilus | 2,866 | 1,601 | 46 | 43 | |
gaby | Glycocaulis abyssi | 2,894 | 1,541 | 51 | 1 | |
Hyphobacterium | ||||||
hyt | Hyphobacterium sp. CCMP332 | 2,546 | 1,419 | 49 | 42 | |
Oceanicaulis | ||||||
oax | Oceanicaulis alexandrii | 2,826 | 1,487 | 55 | 1 | |
Fretibacter | ||||||
frb | Fretibacter rubidus | 3,120 | 1,604 | 43 | ||
Algimonas | ||||||
apop | Algimonas porphyrae | 3,012 | 1,440 | 47 | ||
Hyphomonas | ||||||
hne | Hyphomonas neptunium | 3,505 | 1,809 | 47 | 47 | |
Hirschia | ||||||
hba | Hirschia baltica | 3,187 | 1,743 | 47 | 46 | |
Viadribacter | ||||||
cbot | Candidatus Viadribacter manganicus | 3,743 | 1,715 | 57 | 57 | |
unclassified Hyphomonadaceae | ||||||
hbc | Hyphomonadaceae bacterium UKL13-1 | 2,934 | 1,602 | 44 | 44 | |
Zymomonas | ||||||
zmo | Zymomonas mobilis subsp. mobilis ZM4 | 1,736 | 1,197 | 60 | 60 | |
zmn | Zymomonas mobilis subsp. mobilis NCIMB 11163 | 1,884 | 1,245 | 63 | 62 | |
zmm | Zymomonas mobilis subsp. mobilis ATCC 10988 | 1,803 | 1,214 | 57 | 56 | |
zmb | Zymomonas mobilis subsp. mobilis ATCC 29191 | 1,709 | 1,160 | 64 | 63 | |
zmi | Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023 | 1,840 | 1,232 | 58 | 56 | |
zmc | Zymomonas mobilis subsp. mobilis CP4 = NRRL B-14023 | 1,830 | 1,225 | 61 | 61 | |
zmr | Zymomonas mobilis subsp. mobilis NRRL B-12526 | 1,856 | 1,234 | 61 | 61 | |
zmp | Zymomonas mobilis subsp. pomaceae ATCC 29192 | 1,748 | 1,191 | 64 | 63 | |
Novosphingobium | ||||||
nar | Novosphingobium aromaticivorans | 3,937 | 2,030 | 69 | 67 | |
npp | Novosphingobium sp. PP1Y | 4,683 | 2,434 | 67 | 66 | |
npn | Novosphingobium pentaromativorans | 4,641 | 2,385 | 65 | 65 | |
nre | Novosphingobium resinovorum | 6,113 | 2,833 | 71 | 70 | |
nov | Novosphingobium sp. P6W | 5,663 | 2,715 | 80 | 76 | |
not | Novosphingobium sp. THN1 | 3,882 | 1,867 | 68 | 60 | |
nor | Novosphingobium sp. EMRT-2 | 4,335 | 2,178 | 59 | 55 | |
ngf | Novosphingobium ginsenosidimutans | 2,996 | 1,618 | 50 | 50 | |
nog | Novosphingobium sp. Gsoil 351 | 3,371 | 1,661 | 50 | 50 | |
ndr | Novosphingobium decolorationis | 4,180 | 2,129 | 74 | 64 | |
nhum | Novosphingobium humi | 4,342 | 1,794 | 67 | 49 | |
nol | Novosphingobium olei | 3,720 | 1,799 | 59 | 46 | |
ncp | Novosphingobium capsulatum | 4,409 | 2,199 | 78 | 2 | |
novo | Novosphingobium sp. ES2-1 | 4,208 | 2,033 | 68 | 1 | |
Sphingopyxis | ||||||
sal | Sphingopyxis alaskensis | 3,195 | 1,764 | 52 | 48 | |
sphk | Sphingopyxis fribergensis | 4,824 | 2,327 | 49 | 48 | |
sphp | Sphingopyxis sp. 113P3 | 4,471 | 2,111 | 51 | 51 | |
smag | Sphingopyxis macrogoltabida EY-1 | 4,528 | 2,268 | 54 | 54 | |
smaz | Sphingopyxis macrogoltabida 203 | 5,533 | 2,526 | 62 | 60 | |
ster | Sphingopyxis terrae subsp. terrae | 3,697 | 1,941 | 49 | 48 | |
sgi | Sphingopyxis granuli | 4,178 | 2,224 | 60 | 52 | |
sphq | Sphingopyxis sp. QXT-31 | 4,008 | 1,936 | 52 | 52 | |
spho | Sphingopyxis sp. MG | 3,776 | 1,978 | 51 | 50 | |
sphx | Sphingopyxis sp. PAMC25046 | 4,147 | 2,101 | 53 | 51 | |
sina | Sphingopyxis indica | 4,352 | 2,082 | 52 | 51 | |
speg | Sphingopyxis sp. EG6 | 3,758 | 1,813 | 49 | 2 | |
spfd | Sphingopyxis sp. FD7 | 3,802 | 1,891 | 49 | 1 | |
spbs | Sphingopyxis sp. BSN-002 | 3,627 | 1,766 | 52 | ||
spus | Sphingopyxis sp. USTB-05 | 4,257 | 2,068 | 51 | 1 | |
spog | Sphingopyxis sp. OPL5 | 4,418 | 2,006 | 52 | 2 | |
spyf | Sphingopyxis sp. YF1 | 4,010 | 1,849 | 59 | ||
spjj | Sphingopyxis sp. J-6 | 4,322 | 2,058 | 52 | ||
sphu | Uncultured Sphingopyxis sp. UC10 | 3,930 | 1,991 | 54 | 50 | |
Rhizorhabdus | ||||||
swi | Rhizorhabdus wittichii RW1 | 5,345 | 2,588 | 56 | 56 | |
sphd | Rhizorhabdus wittichii DC-6 | 5,999 | 2,726 | 58 | 57 | |
rdi | Rhizorhabdus dicambivorans | 5,050 | 2,395 | 58 | 58 | |
Sphingomonas | ||||||
sphm | Sphingomonas sp. MM-1 | 4,361 | 2,224 | 57 | 57 | |
stax | Sphingomonas taxi | 3,401 | 1,907 | 63 | 63 | |
sphi | Sphingomonas hengshuiensis | 4,247 | 2,240 | 55 | 55 | |
ssan | Sphingomonas sanxanigenens | 6,211 | 2,804 | 67 | 66 | |
snj | Sphingomonas sp. NIC1 | 3,279 | 1,790 | 59 | 59 | |
smy | Sphingomonas melonis | 3,569 | 1,866 | 60 | 59 | |
span | Sphingomonas panacis | 4,722 | 2,396 | 62 | 62 | |
skr | Sphingomonas koreensis | 4,508 | 2,248 | 58 | 57 | |
splm | Sphingomonas sp. LM7 | 3,780 | 1,977 | 59 | 59 | |
splk | Sphingomonas sp. LK11 | 3,450 | 1,861 | 74 | 73 | |
spkc | Sphingomonas sp. KC8 | 3,889 | 2,073 | 68 | 57 | |
sphc | Sphingomonas psychrotolerans | 4,386 | 2,197 | 59 | 59 | |
sphf | Sphingomonas sp. FARSPH | 3,434 | 1,912 | 60 | 59 | |
spha | Sphingomonas paeninsulae | 3,596 | 1,740 | 57 | 55 | |
spau | Sphingomonas paucimobilis | 3,612 | 1,988 | 68 | 68 | |
slut | Sphingomonas lutea | 2,356 | 1,219 | 53 | 51 | |
srhi | Sphingomonas rhizophila | 2,280 | 1,171 | 52 | 51 | |
slan | Sphingomonas lacunae | 2,780 | 1,497 | 50 | 50 | |
sdh | Sphingomonas daechungensis | 2,398 | 970 | 53 | 52 | |
ssed | Sphingomonas sediminicola | 2,421 | 1,083 | 52 | 52 | |
spap | Sphingomonas alpina | 4,665 | 2,212 | 58 | 54 | |
sxa | Sphingomonas xanthus | 2,150 | 1,247 | 52 | 51 | |
spai | Sphingomonas panacisoli | 3,225 | 1,608 | 51 | 51 | |
spii | Sphingomonas piscis | 2,597 | 1,301 | 54 | 52 | |
ssin | Sphingomonas sinipercae | 2,088 | 1,158 | 51 | 51 | |
ssau | Sphingomonas sabuli | 2,448 | 1,263 | 51 | 51 | |
sari | Sphingomonas aliaeris | 3,685 | 1,715 | 57 | 57 | |
schy | Sphingomonas changnyeongensis | 2,593 | 1,383 | 56 | 56 | |
ssua | Sphingomonas suaedae | 3,831 | 1,872 | 52 | 52 | |
sbin | Sphingomonas bisphenolicum | 5,008 | 2,245 | 72 | 67 | |
saer | Sphingomonas aerolata | 3,730 | 1,663 | 71 | 71 | |
smor | Sphingomonas morindae | 3,878 | 1,681 | 63 | 63 | |
sglc | Sphingomonas glaciei | 2,782 | 1,229 | 54 | 53 | |
sqo | Sphingomonas qomolangmaensis | 3,146 | 1,437 | 57 | 57 | |
scab | Sphingomonas cannabina | 4,009 | 1,670 | 51 | 50 | |
srad | Sphingomonas radiodurans | 3,414 | 1,465 | 57 | 57 | |
shan | Sphingomonas hankookensis | 3,637 | 1,631 | 66 | 65 | |
snap | Sphingomonas naphthae | 4,102 | 1,953 | 56 | 56 | |
snos | Sphingomonas nostoxanthinifaciens | 3,994 | 1,805 | 60 | 59 | |
sdon | Sphingomonas donggukensis | 2,787 | 1,469 | 52 | 51 | |
ssag | Sphingomonas sanguinis | 3,900 | 2,006 | 73 | 73 | |
sabi | Sphingomonas abietis | 4,057 | 1,943 | 72 | 56 | |
saap | Sphingomonas sp. AAP5 | 3,982 | 2,016 | 63 | 1 | |
Sphingobium | ||||||
sjp | Sphingobium indicum UT26S | 4,394 | 2,146 | 67 | 67 | |
sinb | Sphingobium indicum B90A | 3,623 | 1,964 | 59 | 59 | |
sch | Sphingobium chlorophenolicum | 4,072 | 2,154 | 67 | 66 | |
ssy | Sphingobium sp. SYK-6 | 4,063 | 2,041 | 59 | 58 | |
syb | Sphingobium sp. YBL2 | 4,742 | 2,384 | 65 | 64 | |
sbd | Sphingobium baderi | 4,360 | 2,152 | 60 | 59 | |
spmi | Sphingobium sp. MI1205 | 4,570 | 2,240 | 56 | 55 | |
sphb | Sphingobium sp. EP60837 | 4,075 | 2,029 | 56 | 56 | |
sphr | Sphingobium sp. RAC03 | 4,144 | 2,078 | 63 | 63 | |
spht | Sphingobium sp. TKS | 5,987 | 2,838 | 63 | 62 | |
shyd | Sphingobium xenophagum | 4,176 | 2,099 | 66 | 66 | |
sya | Sphingobium yanoikuyae | 5,005 | 2,466 | 75 | 75 | |
sclo | Sphingobium cloacae | 3,993 | 2,069 | 55 | 55 | |
spyg | Sphingobium sp. YG1 | 4,963 | 2,474 | 73 | 73 | |
sufl | Sphingobium fuliginis ATCC 27551 | 4,635 | 2,309 | 67 | 66 | |
sbar | Sphingobium fuliginis KK22 | 4,539 | 2,389 | 66 | 66 | |
sami | Sphingobium amiense | 4,089 | 2,132 | 60 | 58 | |
spph | Sphingobium phenoxybenzoativorans | 4,601 | 2,136 | 55 | 53 | |
spag | Sphingobium sp. AntQ-1 | 4,700 | 2,246 | 76 | ||
spca | Sphingobium sp. CAP-1 | 4,190 | 2,131 | 67 | 1 | |
sprs | Sphingobium sp. RSMS | 4,746 | 2,271 | 66 | ||
spjs | Sphingobium sp. JS3065 | 4,738 | 2,284 | 69 | ||
spwt | Sphingobium sp. WTD-1 | 5,447 | 2,387 | 76 | ||
Citromicrobium | ||||||
cij | Citromicrobium sp. JL477 | 3,027 | 1,642 | 49 | 48 | |
Sphingorhabdus | ||||||
sphg | Sphingorhabdus sp. M41 | 3,074 | 1,646 | 53 | 53 | |
sfla | Sphingorhabdus sp. SMR4y | 3,340 | 1,698 | 57 | 54 | |
sphy | Sphingorhabdus sp. YGSMI21 | 3,746 | 1,921 | 55 | 53 | |
sphl | Sphingorhabdus lutea | 2,359 | 1,347 | 51 | 50 | |
slaa | Sphingorhabdus lacus | 3,212 | 1,681 | 50 | 23 | |
Blastomonas | ||||||
blas | Blastomonas sp. RAC04 | 4,126 | 2,075 | 52 | 52 | |
bfw | Blastomonas fulva | 3,762 | 1,981 | 56 | 55 | |
bmaa | Blastomonas marina | 2,772 | 1,434 | 51 | 49 | |
Tardibacter | ||||||
sphj | Tardibacter chloracetimidivorans | 3,795 | 1,670 | 50 | 49 | |
Sphingosinithalassobacter | ||||||
spzr | Sphingosinithalassobacter tenebrarum | 3,734 | 1,893 | 55 | 52 | |
Hankyongella | ||||||
hgn | Hankyongella ginsenosidimutans | 1,993 | 738 | 52 | 52 | |
Parasphingopyxis | ||||||
palg | Parasphingopyxis algicola | 3,490 | 1,756 | 52 | 51 | |
parp | Parasphingopyxis sp. CP4 | 2,867 | 1,468 | 51 | ||
Parasphingorhabdus | ||||||
parj | Parasphingorhabdus cellanae | 3,509 | 1,823 | 47 | 47 | |
phao | Parasphingorhabdus halotolerans | 3,032 | 1,516 | 46 | 46 | |
Andeanibacterium | ||||||
acob | Candidatus Andeanibacterium colombiense | 3,365 | 1,652 | 53 | 45 | |
Stakelama | ||||||
ssaa | Stakelama saccharophila | 2,898 | 1,592 | 51 | ||
Alterisphingorhabdus | ||||||
acoa | Alterisphingorhabdus coralli | 3,013 | 1,506 | 49 | 1 | |
Sphingosinicella | ||||||
smic | Sphingosinicella microcystinivorans | 3,810 | 2,001 | 52 | 50 | |
sphs | Sphingosinicella sp. BN140058 | 5,412 | 2,336 | 67 | 66 | |
sflv | Sphingosinicella flava | 2,387 | 1,295 | 51 | 44 | |
Sandaracinobacteroides | ||||||
sand | Sandaracinobacteroides saxicola | 3,298 | 1,738 | 49 | 48 | |
Polymorphobacter | ||||||
poq | Polymorphobacter sp. PAMC 29334 | 4,364 | 1,969 | 52 | 51 | |
pmea | Polymorphobacter megasporae | 4,379 | 1,883 | 52 | 51 | |
Altererythrobacter | ||||||
aep | Altererythrobacter epoxidivorans | 2,773 | 1,533 | 46 | 46 | |
alb | Altererythrobacter sp. B11 | 3,588 | 1,918 | 57 | 54 | |
alh | Altererythrobacter sp. BO-6 | 2,774 | 1,495 | 54 | 53 | |
arue | Altererythrobacter rubellus | 2,211 | 1,295 | 48 | 48 | |
altn | Altererythrobacter sp. N1 | 3,256 | 1,663 | 51 | 2 | |
altc | Altererythrobacter arenosus | 3,158 | 1,562 | 51 | 1 | |
Croceibacterium | ||||||
aay | Croceibacterium atlanticum | 3,273 | 1,771 | 54 | 54 | |
Pelagerythrobacter | ||||||
amx | Pelagerythrobacter marensis | 2,660 | 1,529 | 54 | 50 | |
pmas | Pelagerythrobacter marinus | 3,332 | 1,810 | 60 | 58 | |
Paraurantiacibacter | ||||||
anh | Paraurantiacibacter namhicola | 2,513 | 1,384 | 50 | 49 | |
Tsuneonella | ||||||
ado | Tsuneonella dongtanensis | 2,897 | 1,557 | 50 | 49 | |
tfv | Tsuneonella flava | 2,970 | 1,602 | 53 | 51 | |
Croceicoccus | ||||||
cna | Croceicoccus naphthovorans | 3,508 | 1,835 | 50 | 50 | |
cman | Croceicoccus marinus | 3,655 | 1,971 | 57 | 57 | |
Aurantiacibacter | ||||||
ery | Aurantiacibacter atlanticus | 3,211 | 1,693 | 48 | 48 | |
egn | Aurantiacibacter gangjinensis | 2,653 | 1,399 | 46 | 46 | |
Qipengyuania | ||||||
efv | Qipengyuania flava | 3,001 | 1,602 | 59 | 58 | |
qci | Qipengyuania citrea | 3,303 | 1,747 | 58 | 57 | |
qsp | Qipengyuania spongiae | 2,824 | 1,493 | 52 | 51 | |
qso | Qipengyuania soli | 2,841 | 1,489 | 52 | 44 | |
qar | Qipengyuania aurantiaca | 2,686 | 1,412 | 59 | ||
qge | Qipengyuania gelatinilytica | 2,747 | 1,420 | 52 | 45 | |
qps | Qipengyuania psychrotolerans | 2,613 | 1,410 | 55 | 49 | |
qxi | Qipengyuania xiapuensis | 2,598 | 1,376 | 52 | 1 | |
qpr | Qipengyuania profunda | 3,164 | 1,550 | 52 | ||
Erythrobacter | ||||||
eli | Erythrobacter litoralis HTCC2594 | 3,011 | 1,562 | 45 | 43 | |
elq | Erythrobacter litoralis DSM 8509 | 3,098 | 1,606 | 54 | 50 | |
erk | Erythrobacter sp. KY5 | 3,062 | 1,624 | 49 | 49 | |
err | Erythrobacter aureus | 3,245 | 1,599 | 61 | 58 | |
erf | Erythrobacter sp. THAF29 | 3,062 | 1,604 | 50 | 48 | |
emv | Erythrobacter mangrovi | 2,957 | 1,614 | 54 | 53 | |
pns | Erythrobacter neustonensis | 2,793 | 1,606 | 57 | 56 | |
eryt | Erythrobacter sp. JK5 | 3,092 | 1,529 | 52 | 4 | |
eryz | Erythrobacter sp. 3-20A1M | 2,830 | 1,541 | 52 | 2 | |
erys | Erythrobacter sp. SDW2 | 2,793 | 1,476 | 50 | ||
erq | Erythrobacter sp. BLCC-B19 | 3,341 | 1,673 | 51 | ||
Porphyrobacter | ||||||
porl | Porphyrobacter sp. LM 6 | 2,842 | 1,568 | 50 | 50 | |
phz | Porphyrobacter sp. HT-58-2 | 2,946 | 1,639 | 51 | 50 | |
pot | Porphyrobacter sp. YT40 | 3,600 | 1,812 | 53 | 51 | |
porc | Porphyrobacter sp. CACIAM 03H1 | 3,247 | 1,661 | 51 | 40 | |
Caenibius | ||||||
ntd | Caenibius tardaugens | 3,923 | 2,006 | 57 | 57 | |
caen | Caenibius sp. WL | 3,319 | 1,405 | 60 | 59 | |
Alteriqipengyuania | ||||||
aflv | Alteriqipengyuania flavescens | 2,683 | 1,379 | 51 | 49 | |
Gluconobacter | ||||||
gox | Gluconobacter oxydans 621H | 2,664 | 1,481 | 67 | 67 | |
goh | Gluconobacter oxydans H24 | 3,732 | 1,871 | 74 | 74 | |
goy | Gluconobacter oxydans DSM 3504 | 2,463 | 1,516 | 67 | 67 | |
gal | Gluconobacter albidus | 2,941 | 1,666 | 75 | 74 | |
gti | Gluconobacter thailandicus | 3,159 | 1,807 | 78 | 77 | |
gsp | Gluconobacter sphaericus | 2,826 | 1,602 | 72 | 70 | |
gfa | Gluconobacter frateurii | 2,939 | 1,687 | 77 | 76 | |
Granulibacter | ||||||
gbe | Granulibacter bethesdensis CGDNIH1 | 2,571 | 1,502 | 61 | 61 | |
gbh | Granulibacter bethesdensis CGDNIH2 | 2,615 | 1,515 | 61 | 61 | |
gbc | Granulibacter bethesdensis NIH3.1 | 2,556 | 1,515 | 61 | 61 | |
gbs | Granulibacter bethesdensis CGDNIH4 | 2,553 | 1,514 | 61 | 61 | |
Gluconacetobacter | ||||||
gdi | Gluconacetobacter diazotrophicus PA1 5 (Brazil) | 3,855 | 2,027 | 67 | 67 | |
gdj | Gluconacetobacter diazotrophicus PA1 5 (JGI) | 3,501 | 2,002 | 70 | 69 | |
Komagataeibacter | ||||||
gxy | Komagataeibacter medellinensis | 3,195 | 1,778 | 75 | 75 | |
gxl | Komagataeibacter xylinus | 3,674 | 1,963 | 71 | 71 | |
kna | Komagataeibacter nataicola | 3,317 | 1,770 | 75 | 73 | |
keu | Komagataeibacter europaeus | 3,459 | 1,896 | 73 | 72 | |
ksc | Komagataeibacter saccharivorans | 3,482 | 1,960 | 74 | 73 | |
kre | Komagataeibacter rhaeticus | 3,162 | 1,786 | 53 | 52 | |
koi | Komagataeibacter oboediens | 3,616 | 1,917 | 76 | 75 | |
Acetobacter | ||||||
apt | Acetobacter pasteurianus IFO 3283-01 | 3,050 | 1,732 | 72 | 68 | |
apw | Acetobacter pasteurianus IFO 3283-01-42C | 2,984 | 1,699 | 66 | 63 | |
apf | Acetobacter pasteurianus IFO 3283-03 | 3,048 | 1,728 | 72 | 72 | |
apu | Acetobacter pasteurianus IFO 3283-07 | 3,047 | 1,731 | 72 | 68 | |
apg | Acetobacter pasteurianus IFO 3283-12 | 3,046 | 1,727 | 72 | 72 | |
apq | Acetobacter pasteurianus IFO 3283-22 | 3,048 | 1,728 | 72 | 72 | |
apx | Acetobacter pasteurianus IFO 3283-26 | 3,048 | 1,728 | 72 | 72 | |
apz | Acetobacter pasteurianus IFO 3283-32 | 3,046 | 1,727 | 72 | 72 | |
apk | Acetobacter pasteurianus 386B | 2,876 | 1,584 | 66 | 66 | |
asz | Acetobacter senegalensis | 3,605 | 1,902 | 64 | 64 | |
asv | Acetobacter oryzifermentans | 2,789 | 1,606 | 73 | 73 | |
aace | Acetobacter aceti | 3,200 | 1,717 | 65 | 62 | |
aper | Acetobacter persici | 3,044 | 1,532 | 79 | 77 | |
apom | Acetobacter pomorum | 2,662 | 1,578 | 76 | 74 | |
ato | Acetobacter tropicalis | 3,591 | 1,861 | 77 | 75 | |
aasc | Acetobacter ascendens | 2,673 | 1,510 | 75 | 74 | |
acet | Acetobacter sp. JWB | 2,596 | 1,523 | 76 | 74 | |
aot | Acetobacter orientalis | 3,563 | 1,599 | 70 | 70 | |
aoy | Acetobacter oryzoeni | 2,777 | 1,608 | 76 | 75 | |
acek | Acetobacter vaccinii | 2,658 | 1,579 | 76 | 75 | |
Asaia | ||||||
abg | Asaia bogorensis | 2,758 | 1,611 | 85 | 76 | |
Kozakia | ||||||
kba | Kozakia baliensis | 3,179 | 1,730 | 76 | 75 | |
Neoasaia | ||||||
nch | Neoasaia chiangmaiensis | 3,002 | 1,680 | 70 | 68 | |
Commensalibacter | ||||||
coq | Commensalibacter melissae AMU001 | 1,756 | 1,139 | 67 | 66 | |
comm | Commensalibacter melissae ESL0284 | 1,669 | 1,130 | 67 | 66 | |
Neokomagataea | ||||||
ntn | Neokomagataea tanensis | 2,179 | 1,384 | 90 | 89 | |
Oecophyllibacter | ||||||
neh | Oecophyllibacter saccharovorans | 1,618 | 1,052 | 52 | 51 | |
Swingsia | ||||||
ssam | Swingsia samuiensis | 1,987 | 1,258 | 78 | 77 | |
Formicincola | ||||||
swf | Formicincola oecophyllae | 1,664 | 993 | 54 | 53 | |
Bombella | ||||||
bob | Bombella sp. ESL0368 | 1,694 | 1,154 | 74 | 73 | |
Aristophania | ||||||
bomb | Aristophania vespae | 1,587 | 999 | 76 | 75 | |
Entomobacter | ||||||
ebla | Entomobacter blattae | 2,360 | 1,297 | 67 | 66 | |
Lichenicola | ||||||
lck | Lichenicola cladoniae | 5,411 | 2,679 | 63 | 62 | |
Novacetimonas | ||||||
kha | Novacetimonas hansenii | 2,980 | 1,701 | 77 | 75 | |
Parasaccharibacter | ||||||
parz | Parasaccharibacter sp. TMW 2.1888 | 1,734 | 1,139 | 74 | 73 | |
Rhodovastum | ||||||
rap | Rhodovastum atsumiense | 7,307 | 3,215 | 102 | 73 | |
Kirkpatrickella | ||||||
kdp | Candidatus Kirkpatrickella diaphorinae | 1,845 | 1,169 | 64 | 63 | |
Nguyenibacter | ||||||
ngu | Nguyenibacter sp. L1 | 3,784 | 2,080 | 71 | 70 | |
Acidiphilium | ||||||
acr | Acidiphilium cryptum | 3,559 | 2,120 | 55 | 55 | |
amv | Acidiphilium multivorum | 3,949 | 2,292 | 57 | 56 | |
Acidocella | ||||||
acim | Acidocella sp. MX-AZ03 | 3,531 | 1,288 | 65 | 64 | |
Roseomonas | ||||||
rgi | Roseomonas gilardii | 4,714 | 2,639 | 78 | 77 | |
ros | Roseomonas sp. FDAARGOS_362 | 4,481 | 2,488 | 80 | 79 | |
rmuc | Roseomonas mucosa | 4,376 | 2,477 | 80 | 79 | |
rmt | Roseomonas marmotae | 4,417 | 2,339 | 73 | 72 | |
rfl | Roseomonas fluvialis | 5,267 | 2,445 | 66 | 55 | |
rcv | Teichococcus cervicalis | 4,242 | 2,030 | 72 | 70 | |
Sediminicoccus | ||||||
srf | Sediminicoccus rosea | 4,582 | 2,335 | 58 | 58 | |
Elioraea | ||||||
elio | Elioraea tepida | 3,083 | 1,853 | 53 | 48 | |
Stella | ||||||
shum | Stella humosa | 5,556 | 2,978 | 64 | 55 | |
svc | Stella vacuolata | 5,515 | 2,998 | 58 | 55 | |
stel | Stella sp. ATCC 35155 | 5,058 | 2,681 | 71 | 55 | |
Azospirillum | ||||||
azl | Azospirillum sp. B510 | 6,309 | 3,508 | 108 | 108 | |
ali | Azospirillum lipoferum | 6,098 | 3,232 | 121 | 105 | |
abs | Azospirillum baldaniorum Sp245 | 7,559 | 3,325 | 114 | 96 | |
abq | Azospirillum brasilense Az39 | 6,311 | 3,445 | 114 | 114 | |
abf | Azospirillum brasilense Sp 7 | 5,669 | 3,103 | 120 | 120 | |
ati | Azospirillum thiophilum | 6,191 | 3,452 | 106 | 105 | |
ahu | Azospirillum humicireducens | 5,775 | 3,122 | 85 | 73 | |
azt | Azospirillum sp. TSH58 | 6,285 | 3,371 | 117 | 97 | |
azm | Azospirillum ramasamyi | 5,337 | 3,023 | 117 | 91 | |
azz | Azospirillum thermophilum | 5,572 | 3,041 | 96 | 76 | |
aoz | Azospirillum oryzae | 5,910 | 3,211 | 104 | 86 | |
aare | Azospirillum argentinense | 6,816 | 3,388 | 118 | 36 | |
azs | Azospirillum sp. TSH100 | 6,112 | 3,396 | 110 | 37 | |
azp | Azospirillum sp. TSA2s | 7,087 | 3,638 | 115 | 12 | |
adj | Azospirillum doebereinerae | 6,034 | 2,925 | 106 | ||
Nitrospirillum | ||||||
nao | Nitrospirillum viridazoti | 6,079 | 3,013 | 82 | 69 | |
Niveispirillum | ||||||
ncb | Niveispirillum cyanobacteriorum | 5,159 | 2,736 | 74 | 62 | |
Skermanella | ||||||
skt | Skermanella cutis | 6,830 | 3,441 | 87 | 68 | |
smuc | Skermanella mucosa | 7,042 | 3,428 | 86 | 57 | |
sroe | Skermanella rosea | 7,081 | 3,497 | 87 | 56 | |
Rhodospirillum | ||||||
rru | Rhodospirillum rubrum ATCC 11170 | Ref | 3,841 | 2,183 | 70 | 70 |
rrf | Rhodospirillum rubrum F11 | 3,878 | 2,190 | 67 | 67 | |
rce | Rhodospirillum centenum | 4,003 | 2,097 | 64 | 63 | |
Pararhodospirillum | ||||||
rpm | Pararhodospirillum photometricum | 3,284 | 1,862 | 74 | 11 | |
Magnetospirillum | ||||||
mgy | Magnetospirillum gryphiswaldense MSR-1 v2 | 4,255 | 2,182 | 67 | 57 | |
mgry | Magnetospirillum gryphiswaldense MSR-1 | 3,903 | 2,113 | 65 | 55 | |
magx | Magnetospirillum sp. XM-1 | 4,952 | 2,333 | 70 | 59 | |
magn | Magnetospirillum sp. ME-1 | 4,086 | 2,116 | 60 | 55 | |
Endolissoclinum | ||||||
thal | Candidatus Endolissoclinum faulkneri L2 | 1,498 | 663 | 48 | 48 | |
efk | Candidatus Endolissoclinum faulkneri L5 | 770 | 665 | 47 | 46 | |
Ferrovibrio | ||||||
fer | Ferrovibrio terrae | 4,108 | 2,270 | 53 | 47 | |
Defluviicoccus | ||||||
dex | Defluviicoccus sp. SSA4 | 3,585 | 1,664 | 52 | 41 | |
dvn | Defluviicoccus vanus | 3,475 | 1,733 | 57 | 49 | |
Aerophototrophica | ||||||
acru | Aerophototrophica crusticola | 3,267 | 1,586 | 57 | 2 | |
Algihabitans | ||||||
aalu | Algihabitans albus | 4,310 | 2,360 | 58 | ||
Paramagnetospirillum | ||||||
mag | Paramagnetospirillum magneticum | 4,559 | 2,221 | 4 | 4 | |
Haematospirillum | ||||||
hjo | Haematospirillum jordaniae | 2,169 | 1,301 | 76 | 76 | |
Hypericibacter | ||||||
htq | Hypericibacter terrae | 5,361 | 2,772 | 62 | 50 | |
hadh | Hypericibacter adhaerens | 5,247 | 2,845 | 59 | 48 | |
Thalassospira | ||||||
txi | Thalassospira xiamenensis | 4,351 | 2,461 | 73 | 73 | |
thac | Thalassospira marina | 4,715 | 2,710 | 90 | 72 | |
tii | Thalassospira indica | 4,244 | 2,492 | 81 | 68 | |
thai | Thalassospira sp. A40-3 | 3,888 | 2,296 | 80 | 49 | |
tlu | Thalassospira lucentensis | 4,293 | 2,421 | 77 | 18 | |
ttb | Thalassospira tepidiphila | 3,935 | 2,305 | 77 | 12 | |
thgo | Thalassospira sp. GO-4 | 4,031 | 2,414 | 80 | ||
Magnetospira | ||||||
magq | Magnetospira sp. QH-2 | 3,775 | 2,006 | 59 | 55 | |
Varunaivibrio | ||||||
vsu | Varunaivibrio sulfuroxidans | 2,792 | 1,682 | 58 | 17 | |
Nisaea | ||||||
naci | Nisaea acidiphila | 4,369 | 2,061 | 64 | 48 | |
Thalassobaculum | ||||||
thar | Thalassobaculum sp. OXR-137 | 5,167 | 2,459 | 62 | 21 | |
Tistrella | ||||||
tmo | Tistrella mobilis | 5,783 | 3,110 | 66 | 65 | |
Parvularcula | ||||||
pbr | Parvularcula bermudensis | 2,687 | 1,469 | 46 | 46 | |
Hyphococcus | ||||||
hfl | Hyphococcus flavus | 3,266 | 1,561 | 48 | 18 | |
hfo | Hyphococcus formosus | 2,958 | 1,581 | 49 | ||
Pelagibacter | ||||||
pub | Candidatus Pelagibacter ubique | 1,354 | 970 | 35 | 35 | |
pel | Candidatus Pelagibacter sp. IMCC9063 | 1,447 | 922 | 35 | 35 | |
peg | Candidatus Pelagibacter giovannonii | 1,414 | 967 | 36 | 31 | |
unclassified Pelagibacteraceae | ||||||
apc | Alpha proteobacterium HIMB59 | 1,493 | 1,048 | 38 | 38 | |
apm | Alpha proteobacterium HIMB5 | 1,431 | 979 | 35 | 35 | |
Paremcibacter | ||||||
ecog | Paremcibacter congregatus | 3,576 | 1,966 | 59 | 44 | |
Pseudemcibacter | ||||||
paqi | Pseudemcibacter aquimaris | 3,119 | 1,576 | 47 | 9 | |
Puniceispirillum | ||||||
apb | Candidatus Puniceispirillum marinum | 2,546 | 1,587 | 39 | 39 | |
Sneathiella | ||||||
snea | Sneathiella marina | 3,819 | 2,098 | 63 | 35 | |
Kordiimonas | ||||||
koz | Kordiimonas sp. SCSIO 12610 | 3,171 | 1,333 | 53 | 31 | |
Temperatibacter | ||||||
tmk | Temperatibacter marinus | 2,830 | 1,537 | 52 | 7 | |
Gimibacter | ||||||
gso | Gimibacter soli | 3,239 | 1,787 | 50 | 15 | |
other Pseudomonadota | ||||||
Acidithiobacillus | ||||||
afr | Acidithiobacillus ferrooxidans ATCC 23270 | 3,147 | 1,682 | 93 | 92 | |
afe | Acidithiobacillus ferrooxidans ATCC 53993 | 2,826 | 1,674 | 56 | 55 | |
acu | Acidithiobacillus caldus SM-1 | 3,186 | 1,759 | 53 | 52 | |
acz | Acidithiobacillus caldus ATCC 51756 | 2,933 | 1,668 | 55 | 54 | |
afi | Acidithiobacillus ferrivorans | 3,093 | 1,732 | 57 | 56 | |
afj | Acidithiobacillus ferridurans | 3,026 | 1,706 | 54 | 53 | |
atx | Acidithiobacillus thiooxidans | 3,251 | 1,679 | 84 | 47 | |
afp | Acidithiobacillus ferriphilus | 2,409 | 1,493 | 57 | 43 | |
aciy | Acidithiobacillus sp. YTS05 | 2,664 | 1,303 | 57 | 25 | |
Mariprofundus | ||||||
maes | Mariprofundus aestuarium | 2,427 | 1,443 | 59 | 43 | |
mfn | Mariprofundus ferrinatatus | 2,237 | 1,400 | 51 | 37 | |
Hydrogenophilus | ||||||
htl | Hydrogenophilus thermoluteolus | 2,148 | 1,521 | 58 | 47 | |
Magnetococcus | ||||||
mgm | Magnetococcus marinus | 3,716 | 1,783 | 57 | 57 | |
Campylobacterota | ||||||
Helicobacter | ||||||
hpy | Helicobacter pylori 26695 | Ref | 1,566 | 963 | 43 | 21 |
heo | Helicobacter pylori 26695 | 1,594 | 989 | 42 | 42 | |
hpj | Helicobacter pylori J99 | Ref | 1,491 | 974 | ||
hpa | Helicobacter pylori HPAG1 | 1,544 | 982 | 42 | 42 | |
hps | Helicobacter pylori Shi470 | 1,569 | 974 | 42 | 42 | |
hhp | Helicobacter pylori Shi112 | 1,564 | 996 | 42 | 42 | |
hhq | Helicobacter pylori Shi169 | 1,525 | 984 | 42 | 42 | |
hhr | Helicobacter pylori Shi417 | 1,548 | 980 | 42 | 42 | |
hpg | Helicobacter pylori G27 | 1,504 | 968 | 43 | 43 | |
hpp | Helicobacter pylori P12 | 1,579 | 965 | 42 | 42 | |
hpb | Helicobacter pylori B38 | 1,384 | 933 | 45 | 44 | |
hpl | Helicobacter pylori B8 | 1,720 | 990 | 42 | 42 | |
hpc | Helicobacter pylori PeCan4 | 1,563 | 981 | 42 | 42 | |
hca | Helicobacter pylori PeCan18 | 1,495 | 968 | 42 | 42 | |
hpm | Helicobacter pylori SJM180 | 1,581 | 975 | 42 | 42 | |
hpe | Helicobacter pylori ELS37 | 1,576 | 985 | 42 | 42 | |
hpo | Helicobacter pylori 35A | 1,470 | 954 | 47 | 45 | |
hpi | Helicobacter pylori 908 | 1,595 | 968 | 39 | 39 | |
hpq | Helicobacter pylori 2017 | 1,593 | 968 | 39 | 39 | |
hpw | Helicobacter pylori 2018 | 1,603 | 969 | 39 | 39 | |
hpu | Helicobacter pylori Cuz20 | 1,564 | 980 | 42 | 42 | |
hef | Helicobacter pylori F16 | 1,500 | 975 | 43 | 43 | |
hpf | Helicobacter pylori F30 | 1,484 | 970 | 43 | 43 | |
heq | Helicobacter pylori F32 | 1,491 | 978 | 43 | 43 | |
hex | Helicobacter pylori F57 | 1,520 | 980 | 43 | 43 | |
hpt | Helicobacter pylori Sat464 | 1,508 | 963 | 42 | 42 | |
hpz | Helicobacter pylori 52 | 1,405 | 953 | 42 | 42 | |
hpv | Helicobacter pylori v225d | 1,550 | 956 | 44 | 44 | |
hpx | Helicobacter pylori 83 | 1,609 | 972 | 47 | 45 | |
hen | Helicobacter pylori SNT49 | 1,519 | 968 | 42 | 42 | |
hph | Helicobacter pylori Lithuania75 | 1,565 | 967 | 42 | 42 | |
heg | Helicobacter pylori Gambia94/24 | 1,605 | 985 | 42 | 42 | |
hpn | Helicobacter pylori India7 | 1,600 | 976 | 38 | 38 | |
hep | Helicobacter pylori Puno120 | 1,540 | 968 | 42 | 42 | |
heu | Helicobacter pylori Puno135 | 1,573 | 986 | 42 | 42 | |
hes | Helicobacter pylori SouthAfrica7 | 1,572 | 960 | 42 | 42 | |
hpys | Helicobacter pylori SouthAfrica20 | 1,703 | 957 | 41 | 41 | |
hcn | Helicobacter pylori HUP-B14 | 1,501 | 966 | 42 | 42 | |
hpd | Helicobacter pylori 51 | 1,415 | 966 | 42 | 42 | |
hey | Helicobacter pylori XZ274 | 1,438 | 870 | 42 | 42 | |
her | Helicobacter pylori Rif1 | 1,595 | 991 | 42 | 42 | |
hei | Helicobacter pylori Rif2 | 1,591 | 989 | 42 | 42 | |
hpya | Helicobacter pylori Aklavik117 | 1,538 | 959 | 42 | 42 | |
hpyk | Helicobacter pylori Aklavik86 | 1,387 | 924 | 42 | 42 | |
hpyo | Helicobacter pylori OK113 | 1,520 | 969 | 42 | 42 | |
hpyl | Helicobacter pylori OK310 | 1,493 | 974 | 42 | 42 | |
hpyb | Helicobacter pylori oki102 | 1,478 | 957 | 43 | 43 | |
hpyc | Helicobacter pylori oki112 | 1,477 | 953 | 43 | 43 | |
hpyd | Helicobacter pylori oki128 | 1,393 | 922 | 43 | 43 | |
hpye | Helicobacter pylori oki154 | 1,439 | 931 | 43 | 43 | |
hpyf | Helicobacter pylori oki422 | 1,468 | 948 | 43 | 43 | |
hpyg | Helicobacter pylori oki673 | 1,437 | 929 | 43 | 43 | |
hpyh | Helicobacter pylori oki828 | 1,445 | 930 | 43 | 43 | |
hpyj | Helicobacter pylori oki898 | 1,488 | 961 | 43 | 43 | |
hpyr | Helicobacter pylori UM032 | 1,427 | 952 | 43 | 43 | |
hpyi | Helicobacter pylori UM037 | 1,504 | 978 | 43 | 43 | |
hpyu | Helicobacter pylori UM066 | 1,465 | 972 | 43 | 43 | |
hpym | Helicobacter pylori UM299 | 1,428 | 954 | 43 | 43 | |
hem | Helicobacter pylori UM298 | 1,429 | 955 | 43 | 43 | |
heb | Helicobacter pylori BM012A | 1,571 | 992 | 43 | 43 | |
hez | Helicobacter pylori BM012S | 1,573 | 992 | 43 | 43 | |
hhe | Helicobacter hepaticus | 1,875 | 1,055 | 40 | 40 | |
hac | Helicobacter acinonychis | 1,618 | 945 | 42 | 42 | |
hms | Helicobacter mustelae | 1,400 | 960 | |||
hfe | Helicobacter felis | 1,654 | 984 | |||
hbi | Helicobacter bizzozeronii | 1,971 | 1,007 | 40 | 40 | |
hce | Helicobacter cetorum MIT 00-7128 | 1,731 | 990 | 44 | 44 | |
hcm | Helicobacter cetorum MIT 99-5656 | 1,689 | 1,020 | 42 | 42 | |
hcp | Helicobacter cinaedi PAGU611 | 2,125 | 1,140 | 45 | 45 | |
hcb | Helicobacter cinaedi CCUG 18818 = ATCC BAA-847 | 2,322 | 1,165 | 46 | 46 | |
hhm | Helicobacter heilmannii | 1,915 | 951 | 50 | 45 | |
hty | Helicobacter typhlonius | 2,117 | 1,096 | 43 | 43 | |
hbl | Helicobacter bilis | 2,060 | 1,043 | 45 | 45 | |
had | Helicobacter apodemus | 1,850 | 1,150 | 50 | 50 | |
het | Helicobacter enhydrae | 1,488 | 894 | 47 | 47 | |
hcl | Helicobacter cholecystus | 1,327 | 917 | 47 | 47 | |
hwi | Helicobacter winghamensis | 1,621 | 1,073 | 53 | 31 | |
hsh | Helicobacter suis | 1,733 | 960 | 45 | 20 | |
hpul | Helicobacter pullorum | 1,668 | 906 | 46 | 3 | |
hail | Helicobacter ailurogastricus | 1,699 | 892 | 43 | 4 | |
hfi | Helicobacter felistomachi | 2,027 | 987 | 44 | ||
hga | Helicobacter gastrofelis | 1,713 | 940 | 44 | ||
hgs | Helicobacter gastrocanis | 1,640 | 957 | 44 | ||
Wolinella | ||||||
wsu | Wolinella succinogenes | 2,044 | 1,321 | |||
Sulfurimonas | ||||||
tdn | Sulfurimonas denitrificans | 2,096 | 1,271 | 60 | 59 | |
sua | Sulfurimonas autotrophica | 2,158 | 1,283 | 55 | 55 | |
suln | Sulfurimonas xiamenensis | 1,867 | 1,164 | 59 | 59 | |
sulg | Sulfurimonas lithotrophica | 2,353 | 1,348 | 61 | 61 | |
sulc | Sulfurimonas sp. CVO | 1,885 | 1,179 | 58 | 58 | |
spal | Sulfurimonas paralvinellae | 2,050 | 1,216 | 58 | 58 | |
ssei | Sulfurimonas sediminis | 2,344 | 1,300 | 59 | 20 | |
sbal | Candidatus Sulfurimonas baltica | 2,653 | 1,304 | 60 | 15 | |
smas | Candidatus Sulfurimonas marisnigri | 2,416 | 1,331 | 60 | 16 | |
smax | Sulfurimonas marina | 2,218 | 995 | 61 | ||
saqt | Sulfurimonas aquatica | 2,643 | 1,295 | 62 | 2 | |
Sulfuricurvum | ||||||
sku | Sulfuricurvum kujiense | 2,798 | 1,470 | 61 | 61 | |
sulr | Candidatus Sulfuricurvum sp. RIFRC-1 | 2,359 | 1,346 | 57 | 57 | |
Campylobacter | ||||||
cje | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 | Ref | 1,572 | 1,089 | 56 | 55 |
cjb | Campylobacter jejuni subsp. jejuni NCTC 11168-BN148 | 1,622 | 1,099 | 56 | 55 | |
cjj | Campylobacter jejuni subsp. jejuni 81-176 | 1,758 | 1,118 | 54 | 54 | |
cju | Campylobacter jejuni subsp. jejuni 81116 | 1,626 | 1,119 | 54 | 54 | |
cjn | Campylobacter jejuni subsp. jejuni ICDCCJ07001 | 1,531 | 1,014 | 53 | 53 | |
cji | Campylobacter jejuni subsp. jejuni IA3902 | 1,666 | 1,107 | 56 | 56 | |
cjm | Campylobacter jejuni subsp. jejuni M1 | 1,622 | 1,111 | 53 | 53 | |
cjs | Campylobacter jejuni subsp. jejuni S3 | 1,783 | 1,124 | 53 | 53 | |
cjp | Campylobacter jejuni subsp. jejuni PT14 | 1,607 | 1,099 | 50 | 50 | |
cjej | Campylobacter jejuni subsp. jejuni 00-2426 | 1,683 | 1,107 | 54 | 54 | |
cjeu | Campylobacter jejuni subsp. jejuni 00-2538 | 1,741 | 1,115 | 54 | 54 | |
cjen | Campylobacter jejuni subsp. jejuni 00-2544 | 1,783 | 1,129 | 54 | 54 | |
cjei | Campylobacter jejuni subsp. jejuni 00-2425 | 1,741 | 1,115 | 50 | 50 | |
cjer | Campylobacter jejuni subsp. jejuni R14 | 1,824 | 1,112 | 53 | 53 | |
cjv | Campylobacter jejuni subsp. jejuni MTVDSCj20 | 1,616 | 1,109 | 55 | 55 | |
cjy | Campylobacter jejuni subsp. jejuni YH001 | 1,750 | 1,117 | 56 | 56 | |
cjq | Campylobacter jejuni subsp. jejuni 35925B2 | 1,613 | 1,121 | 54 | 54 | |
cjl | Campylobacter jejuni subsp. jejuni 00-1597 | 1,722 | 1,116 | 54 | 54 | |
cjw | Campylobacter jejuni subsp. jejuni 00-6200 | 1,668 | 1,104 | 54 | 54 | |
cjr | Campylobacter jejuni RM1221 | 1,838 | 1,103 | 53 | 53 | |
cjd | Campylobacter jejuni subsp. doylei 269.97 | 1,731 | 1,084 | 55 | 55 | |
cjz | Campylobacter jejuni 32488 | 1,689 | 1,106 | 53 | 53 | |
cjx | Campylobacter jejuni 4031 | 1,698 | 1,122 | 9 | 9 | |
cff | Campylobacter fetus subsp. fetus 82-40 | 1,719 | 1,169 | 51 | 51 | |
cft | Campylobacter fetus subsp. fetus 04/554 | 1,715 | 1,166 | 54 | 54 | |
cfv | Campylobacter fetus subsp. venerealis cfvi03/293 | 1,939 | 1,222 | 56 | 56 | |
cfx | Campylobacter fetus subsp. venerealis 97/608 | 1,939 | 1,228 | 54 | 54 | |
cfz | Campylobacter fetus subsp. venerealis 84-112 | 2,054 | 1,235 | 49 | 49 | |
camp | Campylobacter fetus subsp. testudinum 03-427 | 1,695 | 1,178 | 54 | 54 | |
cfp | Campylobacter fetus subsp. testudinum pet-3 | 1,652 | 1,175 | 52 | 52 | |
ccv | Campylobacter curvus | 1,862 | 1,204 | 59 | 58 | |
cha | Campylobacter hominis | 1,687 | 954 | 56 | 56 | |
cco | Campylobacter concisus 13826 | 2,012 | 1,182 | 59 | 58 | |
ccoc | Campylobacter concisus ATCC 33237 | 1,749 | 1,128 | 59 | 58 | |
cla | Campylobacter lari RM2100 | 1,538 | 1,050 | 58 | 58 | |
clr | Campylobacter lari RM16701 | 1,476 | 1,043 | 55 | 55 | |
clm | Campylobacter lari RM16712 | 1,508 | 1,043 | 55 | 55 | |
clq | Campylobacter lari CCUG 22395 | 1,481 | 1,047 | 58 | 58 | |
cln | Campylobacter lari NCTC 11845 | 1,702 | 1,073 | 58 | 58 | |
cll | Campylobacter lari subsp. concheus LMG 11760 | 1,452 | 1,040 | 55 | 55 | |
ccol | Campylobacter coli 76339 | 1,556 | 1,113 | 50 | 50 | |
ccc | Campylobacter coli CVM N29710 | 1,694 | 1,144 | 53 | 53 | |
ccq | Campylobacter coli 15-537360 | 1,617 | 1,127 | 56 | 56 | |
ccf | Campylobacter coli RM1875 | 1,896 | 1,144 | 54 | 54 | |
ccy | Campylobacter coli RM4661 | 1,862 | 1,137 | 50 | 50 | |
ccoi | Campylobacter coli RM5611 | 1,694 | 1,125 | 54 | 54 | |
ccof | Campylobacter coli FB1 | 1,760 | 1,163 | 54 | 54 | |
ccoo | Campylobacter coli OR12 | 2,277 | 1,234 | 54 | 54 | |
caj | Campylobacter iguaniorum | 1,757 | 1,153 | 56 | 56 | |
cis | Campylobacter insulaenigrae | 1,441 | 1,010 | 54 | 54 | |
cvo | Campylobacter volucris | 1,479 | 1,035 | 55 | 55 | |
cpel | Campylobacter peloridis | 1,642 | 1,060 | 57 | 57 | |
camr | Campylobacter sp. RM16704 | 1,492 | 1,032 | 57 | 57 | |
csm | Campylobacter subantarcticus LMG 24374 | 1,675 | 1,079 | 57 | 57 | |
csf | Campylobacter subantarcticus LMG 24377 | 1,771 | 1,085 | 57 | 57 | |
cgra | Campylobacter gracilis | 2,103 | 1,106 | 52 | 52 | |
cure | Campylobacter ureolyticus | 1,594 | 1,022 | 54 | 54 | |
chyo | Campylobacter hyointestinalis | 1,678 | 1,137 | 56 | 56 | |
chv | Campylobacter helveticus | 1,837 | 1,089 | 54 | 49 | |
cspf | Campylobacter sputorum | 1,684 | 1,117 | 59 | 52 | |
cpin | Campylobacter pinnipediorum | 1,607 | 1,029 | 57 | 51 | |
ccun | Campylobacter cuniculorum | 1,791 | 1,114 | 49 | 47 | |
clx | Campylobacter lanienae | 1,561 | 1,072 | 52 | 52 | |
cavi | Campylobacter avium | 1,642 | 1,068 | 49 | 49 | |
chw | Campylobacter hepaticus | 1,385 | 1,005 | 55 | 55 | |
camz | Campylobacter vicugnae | 1,605 | 1,073 | 52 | 52 | |
camy | Campylobacter porcelli | 1,593 | 1,063 | 52 | 52 | |
coj | Campylobacter ornithocola | 1,572 | 1,081 | 58 | 58 | |
cux | Campylobacter upsaliensis | 1,550 | 1,072 | 56 | 56 | |
crx | Campylobacter rectus | 2,276 | 1,213 | 60 | 57 | |
cgeo | Campylobacter geochelonis | 1,884 | 1,188 | 57 | 56 | |
cbla | Campylobacter blaseri | 1,780 | 1,111 | 54 | 51 | |
ccor | Campylobacter corcagiensis | 1,682 | 1,061 | 53 | 48 | |
carm | Campylobacter armoricus | 1,554 | 1,047 | 58 | 47 | |
cmuc | Campylobacter mucosalis | 1,722 | 1,108 | 51 | 43 | |
csho | Campylobacter showae | 1,945 | 1,204 | 59 | 48 | |
cinf | Candidatus Campylobacter infans | 1,673 | 1,020 | 47 | 37 | |
cnv | Campylobacter novaezeelandiae | 1,522 | 1,019 | 55 | 46 | |
cvu | Campylobacter vulpis | 1,604 | 1,053 | 56 | 6 | |
cdev | Campylobacter devanensis | 1,511 | 1,050 | 52 | ||
ccaq | Campylobacter californiensis | 1,734 | 1,114 | 58 | 1 | |
cmol | Campylobacter molothri | 1456 | 56 | |||
Sulfurospirillum | ||||||
sdl | Sulfurospirillum deleyianum | 2,265 | 1,358 | 55 | 55 | |
sba | Sulfurospirillum barnesii | 2,491 | 1,520 | 49 | 49 | |
smul | Sulfurospirillum multivorans | 3,233 | 1,786 | 52 | 52 | |
shal | Sulfurospirillum halorespirans | 2,965 | 1,751 | 53 | 52 | |
suls | Sulfurospirillum diekertiae SL2-1 | 2,945 | 1,660 | 57 | 57 | |
sulj | Sulfurospirillum diekertiae JPD-1 | 2,841 | 1,667 | 58 | 58 | |
sult | Sulfurospirillum diekertiae ACSTCE | 2,701 | 1,579 | 54 | 54 | |
Aliarcobacter | ||||||
abu | Aliarcobacter butzleri RM4018 | 2,259 | 1,366 | 69 | 69 | |
abt | Aliarcobacter butzleri ED-1 | 2,158 | 1,335 | 68 | 68 | |
abl | Aliarcobacter butzleri 7h1h | 2,199 | 1,346 | 70 | 70 | |
ask | Aliarcobacter skirrowii | 1,871 | 1,175 | 58 | 57 | |
atp | Aliarcobacter trophiarum | 1,888 | 1,217 | 66 | 66 | |
acib | Aliarcobacter cibarius | 2,202 | 1,333 | 74 | 54 | |
acre | Aliarcobacter cryaerophilus | 2,045 | 1,261 | 67 | 51 | |
alan | Aliarcobacter lanthieri | 2,195 | 1,335 | 67 | 52 | |
afc | Aliarcobacter faecis | 2,346 | 1,392 | 68 | 50 | |
athr | Aliarcobacter thereius | 1,879 | 1,168 | 64 | 47 | |
Arcobacter | ||||||
ant | Arcobacter nitrofigilis | 3,126 | 1,820 | 70 | 70 | |
aell | Arcobacter ellisii | 2,743 | 1,544 | 78 | 60 | |
aaqi | Arcobacter aquimarinus | 2,452 | 1,444 | 74 | 57 | |
asui | Arcobacter suis | 2,523 | 1,467 | 77 | 59 | |
aclo | Arcobacter cloacae | 2,699 | 1,522 | 77 | 55 | |
avp | Arcobacter venerupis | 3,038 | 1,733 | 85 | 53 | |
adz | Arcobacter defluvii | 2,892 | 1,632 | 76 | 52 | |
arc | Arcobacter sp. L | 2,848 | 1,616 | 71 | 71 | |
paco | Arcobacter acticola | 2,845 | 1,635 | 82 | 60 | |
apoc | Arcobacter porcinus | 1,988 | 1,195 | 63 | 62 | |
aros | Arcobacter roscoffensis | 2,871 | 1,496 | 89 | 2 | |
Poseidonibacter | ||||||
alk | Poseidonibacter lekithochrous | 3,311 | 1,825 | 109 | 57 | |
alp | Poseidonibacter parvus | 2,702 | 1,548 | 85 | 85 | |
Malaciobacter | ||||||
ahs | Malaciobacter halophilus | 2,622 | 1,568 | 84 | 84 | |
amyt | Malaciobacter mytili | 2,880 | 1,585 | 84 | 84 | |
amar | Malaciobacter marinus | 2,717 | 1,623 | 84 | 84 | |
acaa | Malaciobacter canalis | 2,679 | 1,584 | 84 | 84 | |
amol | Malaciobacter molluscorum | 2,666 | 1,594 | 77 | 56 | |
apai | Malaciobacter pacificus | 2,491 | 1,438 | 70 | 52 | |
Halarcobacter | ||||||
hbv | Halarcobacter bivalviorum | 2,584 | 1,512 | 62 | 62 | |
hebr | Halarcobacter ebronensis | 3,016 | 1,766 | 57 | 43 | |
aana | Halarcobacter anaerophilus | 2,906 | 1,732 | 62 | 48 | |
Hydrogenimonas | ||||||
hyo | Hydrogenimonas sp. MAG | 2,183 | 1,238 | 51 | 47 | |
htm | Hydrogenimonas thermophila | 2,514 | 1,301 | 62 | 1 | |
hcj | Hydrogenimonas cancrithermarum | 2,342 | 1,309 | 54 | 1 | |
Nitratifractor | ||||||
nsa | Nitratifractor salsuginis | 2,088 | 1,212 | 54 | 52 | |
Sulfurovum | ||||||
sun | Sulfurovum sp. NBC37-1 | 2,438 | 1,353 | 53 | 53 | |
slh | Sulfurovum lithotrophicum | 2,092 | 1,236 | 54 | 54 | |
sinu | Sulfurovum indicum | 2,119 | 1,273 | 57 | 26 | |
smab | Sulfurovum mangrovi | 2,884 | 1,427 | 94 | 2 | |
Nitratiruptor | ||||||
nis | Nitratiruptor sp. SB155-2 | 1,843 | 1,181 | 54 | 54 | |
nih | Nitratiruptor sp. YY08-10 | 1,897 | 1,142 | 51 | ||
Nautilia | ||||||
nam | Nautilia profundicola | 1,730 | 1,102 | 59 | 59 | |
nap | Nautilia sp. PV-1 | 1,817 | 1,141 | 64 | 64 | |
Caminibacter | ||||||
cmed | Caminibacter mediatlanticus | 1,737 | 1,126 | 63 | 63 | |
cpaf | Caminibacter pacificus | 1,953 | 1,144 | 63 | 63 | |
Hippea | ||||||
hmr | Hippea maritima | 1,677 | 1,113 | 57 | 56 | |
Desulfurella | ||||||
dav | Desulfurella acetivorans | 1,833 | 1,188 | 54 | 54 | |
Thermodesulfobacteriota | ||||||
Geobacter | ||||||
gsu | Geobacter sulfurreducens PCA | Ref | 3,432 | 1,696 | 240 | 57 |
gsk | Geobacter sulfurreducens KN400 | 3,324 | 1,748 | 297 | 57 | |
gme | Geobacter metallireducens | 3,568 | 1,913 | 72 | 58 | |
gpi | Geobacter pickeringii | 3,002 | 1,787 | 61 | 61 | |
gao | Geobacter anodireducens | 2,802 | 1,442 | 58 | 57 | |
gbz | Geobacter benzoatilyticus | 3,246 | 1,622 | 59 | 55 | |
gem | Geobacter sp. M21 | 4,080 | 2,056 | 75 | 73 | |
geb | Geobacter sp. M18 | 4,434 | 2,170 | 77 | 73 | |
gef | Geobacter sp. FeAm09 | 3,608 | 1,741 | 61 | 56 | |
gev | Geobacter sp. SVR | 4,423 | 2,011 | 59 | ||
gec | Geobacter sp. 60473 | 3,429 | 1,711 | 57 | 1 | |
Geotalea | ||||||
gur | Geotalea uraniireducens | 4,357 | 2,155 | 58 | 58 | |
geo | Geotalea daltonii | 3,799 | 1,933 | 86 | 58 | |
Trichlorobacter | ||||||
glo | Trichlorobacter lovleyi | 3,685 | 1,874 | 54 | 53 | |
tamm | Trichlorobacter ammonificans | 2,863 | 1,507 | 195 | 4 | |
Citrifermentans | ||||||
gbm | Citrifermentans bemidjiense | 4,051 | 2,093 | 76 | 74 | |
gbn | Citrifermentans bremense | 3,927 | 2,032 | 75 | 61 | |
Geomonas | ||||||
ger | Geomonas oryzisoli | 4,108 | 1,961 | 74 | 63 | |
gsub | Geomonas subterranea | 4,184 | 2,011 | 77 | 64 | |
gnt | Geomonas nitrogeniifigens | 4,131 | 1,918 | 76 | 64 | |
gpl | Geomonas paludis | 4,339 | 2,023 | 77 | 62 | |
Geoalkalibacter | ||||||
gsb | Geoalkalibacter subterraneus | 3,033 | 1,634 | 62 | 62 | |
ghc | Geoalkalibacter halelectricus | 3,768 | 1,889 | 60 | ||
Syntrophotalea | ||||||
pca | Syntrophotalea carbinolica | 3,304 | 1,850 | 173 | 62 | |
pace | Syntrophotalea acetylenica | 2,774 | 1,610 | 70 | 67 | |
pef | Syntrophotalea acetylenivorans | 2,777 | 1,623 | 64 | 62 | |
Pelobacter | ||||||
ppd | Pelobacter propionicus | 3,804 | 1,938 | 67 | 67 | |
Desulfuromonas | ||||||
deu | Desulfuromonas sp. DDH964 | 3,574 | 1,956 | 90 | 60 | |
dve | Desulfuromonas versatilis | 4,119 | 2,098 | 71 | 58 | |
dep | Desulfuromonas sp. AOP6 | 3,000 | 1,471 | 56 | 52 | |
des | Desulfuromonas soudanensis | 3,504 | 1,868 | 79 | 61 | |
Desulfovibrio | ||||||
dds | Desulfovibrio desulfuricans ATCC 27774 | 2,356 | 1,458 | 68 | 67 | |
dfi | Desulfovibrio fairfieldensis | 3,022 | 1,590 | 68 | 66 | |
dpg | Desulfovibrio piger | 2,535 | 1,340 | 97 | 97 | |
def | Desulfovibrio sp. G11 | 2,892 | 1,549 | 68 | 64 | |
dtr | Candidatus Desulfovibrio trichonymphae | 1,082 | 812 | 57 | 57 | |
dfl | Desulfovibrio ferrophilus | 3,431 | 1,786 | 68 | 68 | |
psyf | Desulfovibrio mangrovi | 3,423 | 1,645 | 82 | 2 | |
dsb | Desulfovibrio subterraneus | 3,449 | 1,803 | 83 | 2 | |
Solidesulfovibrio | ||||||
dma | Solidesulfovibrio magneticus | 4,704 | 2,111 | 60 | 60 | |
dcb | Solidesulfovibrio carbinolicus | 3,982 | 2,012 | 72 | 64 | |
Megalodesulfovibrio | ||||||
dgg | Megalodesulfovibrio gigas | 3,343 | 1,714 | 51 | 51 | |
Oleidesulfovibrio | ||||||
dde | Oleidesulfovibrio alaskensis | 3,258 | 1,841 | 81 | 81 | |
Oceanidesulfovibrio | ||||||
dms | Oceanidesulfovibrio marinus | 4,058 | 2,186 | 59 | 50 | |
Maridesulfovibrio | ||||||
dsa | Maridesulfovibrio salexigens | 3,807 | 2,017 | 108 | 107 | |
dhy | Maridesulfovibrio hydrothermalis | 3,548 | 1,804 | 98 | 92 | |
Desulfocurvibacter | ||||||
daf | Desulfocurvibacter africanus subsp. africanus | 3,725 | 1,899 | 69 | 68 | |
Pseudodesulfovibrio | ||||||
das | Pseudodesulfovibrio aespoeensis | 3,304 | 1,826 | 63 | 62 | |
dpi | Pseudodesulfovibrio piezophilus | 3,354 | 1,818 | 77 | 70 | |
dej | Pseudodesulfovibrio indicus | 3,461 | 1,902 | 60 | 58 | |
pprf | Pseudodesulfovibrio profundus | 4,058 | 2,091 | 78 | 69 | |
psel | Pseudodesulfovibrio cashew | 3,499 | 1,919 | 68 | 67 | |
ddn | Pseudodesulfovibrio mercurii | 3,454 | 1,963 | 64 | 63 | |
psef | Pseudodesulfovibrio sediminis | 3,549 | 1,552 | 67 | 20 | |
ppor | Pseudodesulfovibrio portus | 3,182 | 1,509 | 67 | 3 | |
pnw | Pseudodesulfovibrio nedwellii | 3,463 | 1,730 | 75 | 2 | |
pthe | Pseudodesulfovibrio thermohalotolerans | 3,536 | 1,857 | 80 | 1 | |
pmen | Pseudodesulfovibrio methanolicus | 3,803 | 1,987 | 68 | 1 | |
Lawsonia | ||||||
lip | Lawsonia intracellularis PHE/MN1-00 | 1,342 | 867 | |||
lir | Lawsonia intracellularis N343 | 1,368 | 905 | 51 | 51 | |
Desulfolutivibrio | ||||||
dsx | Desulfolutivibrio sulfoxidireducens | 3,498 | 1,870 | 61 | 52 | |
dsd | Desulfolutivibrio sulfodismutans | 3,869 | 1,921 | 70 | 52 | |
Desulfobaculum | ||||||
pbiz | Desulfobaculum bizertense | 2,945 | 1,575 | 96 | 43 | |
Nitratidesulfovibrio | ||||||
dvu | Nitratidesulfovibrio vulgaris Hildenborough | Ref | 3,531 | 1,645 | 86 | 71 |
dvl | Nitratidesulfovibrio vulgaris DP4 | 3,091 | 1,686 | 86 | 85 | |
dvm | Nitratidesulfovibrio vulgaris Miyazaki F | 3,180 | 1,789 | 80 | 79 | |
dvg | Nitratidesulfovibrio vulgaris RCH1 | 3,221 | 1,691 | 87 | 86 | |
clih | Nitratidesulfovibrio liaohensis | 3,483 | 1,746 | 83 | 9 | |
Taurinivorans | ||||||
tmur | Taurinivorans muris | 1,922 | 1,120 | 72 | 2 | |
Desulfomicrobium | ||||||
dba | Desulfomicrobium baculatum | 3,436 | 1,943 | 75 | 74 | |
doa | Desulfomicrobium orale | 2,477 | 1,454 | 69 | 66 | |
desu | Desulfomicrobium sp. ZS1 | 3,364 | 1,801 | 81 | 3 | |
Thermodesulfomicrobium | ||||||
thew | Thermodesulfomicrobium sp. WS | 2,196 | 1,210 | 63 | 2 | |
Desulfohalobium | ||||||
drt | Desulfohalobium retbaense | 2,526 | 1,506 | 60 | 59 | |
Desulfotalea | ||||||
dps | Desulfotalea psychrophila | 3,236 | 1,732 | 87 | 87 | |
Desulfocapsa | ||||||
dsf | Desulfocapsa sulfexigens | 3,532 | 1,854 | 57 | 57 | |
Desulfofustis | ||||||
dlm | Desulfofustis limnaeus | 3,843 | 1,861 | 60 | 4 | |
Desulfurivibrio | ||||||
dak | Desulfurivibrio alkaliphilus | 2,620 | 1,495 | 57 | 56 | |
Desulfobulbus | ||||||
dpr | Desulfobulbus propionicus | 3,283 | 1,840 | 57 | 56 | |
deo | Desulfobulbus oralis | 2,294 | 1,341 | 61 | 60 | |
dog | Desulfobulbus oligotrophicus | 2,721 | 1,619 | 58 | 57 | |
Desulfomarina | ||||||
dbk | Desulfomarina profundi | 3,974 | 1,883 | 65 | 53 | |
Desulfolithobacter | ||||||
ddu | Desulfolithobacter dissulfuricans | 3,242 | 1,195 | 56 | 5 | |
Electrothrix | ||||||
ecom | Candidatus Electrothrix communis | 4,184 | 1,623 | 56 | 7 | |
eaj | Candidatus Electrothrix aestuarii | 4,504 | 1,664 | 58 | 5 | |
elax | Candidatus Electrothrix laxa | 3,409 | 1,372 | 64 | 5 | |
Electronema | ||||||
eaq | Candidatus Electronema aureum | 2,840 | 1,191 | 57 | 2 | |
Desulfosudis | ||||||
dol | Desulfosudis oleivorans | 3,265 | 1,613 | 53 | 53 | |
Desulfatibacillum | ||||||
dal | Desulfatibacillum aliphaticivorans | 5,255 | 2,299 | 65 | 64 | |
Desulforapulum | ||||||
dat | Desulforapulum autotrophicum | 4,947 | 2,470 | 69 | 69 | |
Desulfobacula | ||||||
dto | Desulfobacula toluolica | 4,375 | 2,248 | 60 | 60 | |
Desulfobacter | ||||||
dhg | Desulfobacter hydrogenophilus | 4,306 | 1,999 | 68 | ||
Desulfosarcina | ||||||
dov | Desulfosarcina ovata subsp. sediminis | 7,386 | 3,157 | 62 | 56 | |
dwd | Desulfosarcina widdelii | 6,742 | 3,025 | 65 | 58 | |
dalk | Desulfosarcina alkanivorans | 6,513 | 3,036 | 61 | 57 | |
desb | Desulfosarcina sp. BuS5 | 4,050 | 254 | 53 | ||
dvr | Desulfosarcina variabilis | 8,578 | 3,339 | 60 | ||
Desulfococcus | ||||||
dml | Desulfococcus multivorans | 3,938 | 2,003 | 62 | 62 | |
Desulfonema | ||||||
dli | Desulfonema limicola | 6,207 | 2,331 | 71 | 55 | |
dmm | Desulfonema magnum | 9,970 | 2,330 | 63 | 47 | |
Desulfoluna | ||||||
dek | Desulfoluna limicola | 4,983 | 2,241 | 96 | 86 | |
Syntrophus | ||||||
sat | Syntrophus aciditrophicus | 3,168 | 1,611 | 51 | 51 | |
Desulfobacca | ||||||
dao | Desulfobacca acetoxidans | 2,866 | 1,520 | 54 | 52 | |
Desulfomonile | ||||||
dti | Desulfomonile tiedjei | 5,494 | 2,383 | 54 | 52 | |
Syntrophobacter | ||||||
sfu | Syntrophobacter fumaroxidans | 4,064 | 2,032 | 64 | 59 | |
Desulfoglaeba | ||||||
dax | Desulfoglaeba alkanexedens | 2,873 | 1,610 | 57 | 56 | |
Desulfarculus | ||||||
dbr | Desulfarculus baarsii | 3,277 | 1,725 | 52 | 51 | |
Desulfoferula | ||||||
dmp | Desulfoferula mesophila | 4,204 | 2,117 | 54 | 1 | |
Thermodesulfatator | ||||||
tid | Thermodesulfatator indicus | 2,195 | 1,365 | 58 | 57 | |
Thermodesulfobacterium | ||||||
top | Thermodesulfobacterium geofontis | 1,596 | 1,066 | 52 | 52 | |
tcm | Thermodesulfobacterium commune | 1,453 | 999 | 50 | 50 | |
thet | Thermodesulfobacterium sp. TA1 | 1,765 | 1,169 | 52 | 52 | |
Caldimicrobium | ||||||
cthi | Caldimicrobium thiodismutans | 1,774 | 1,140 | 49 | 49 | |
Thermosulfuriphilus | ||||||
tav | Thermosulfuriphilus ammonigenes | 2,172 | 1,332 | 55 | 53 | |
Thermosulfurimonas | ||||||
tmai | Thermosulfurimonas marina | 1,752 | 1,186 | 54 | 53 | |
Desulfofervidus | ||||||
daw | Candidatus Desulfofervidus auxilii | 2,503 | 1,204 | 50 | ||
Mycalebacterium | ||||||
mzl | Candidatus Mycalebacterium zealandia | 1,130 | 767 | 52 | ||
Myxococcota | ||||||
Anaeromyxobacter | ||||||
ade | Anaeromyxobacter dehalogenans 2CP-C | 4,346 | 2,169 | 58 | 56 | |
acp | Anaeromyxobacter dehalogenans 2CP-1 | 4,473 | 2,170 | 59 | 58 | |
afw | Anaeromyxobacter sp. Fw109-5 | 4,466 | 2,156 | 58 | 58 | |
ank | Anaeromyxobacter sp. K | 4,457 | 2,185 | 59 | 58 | |
aory | Anaeromyxobacter oryzae | 5,883 | 1,920 | 55 | 55 | |
apau | Anaeromyxobacter paludicola | 3,994 | 1,465 | 56 | 56 | |
Myxococcus | ||||||
mxa | Myxococcus xanthus | 7,331 | 2,730 | 79 | 76 | |
msd | Myxococcus stipitatus | 8,043 | 2,942 | 85 | 82 | |
mym | Myxococcus hansupus | 7,753 | 2,775 | 79 | 78 | |
mfb | Myxococcus fulvus | 8,492 | 3,035 | 89 | 36 | |
myx | Myxococcus sp. MxC21-1 | 7,630 | 2,274 | 84 | 1 | |
mlan | Myxococcus landrumensis | 7,945 | 2,793 | 92 | 1 | |
Corallococcus | ||||||
ccx | Corallococcus coralloides | 8,033 | 2,789 | 68 | 67 | |
mfu | Corallococcus macrosporus HW-1 | 7,284 | 2,683 | 78 | 76 | |
mmas | Corallococcus macrosporus DSM 14697 | 7,143 | 2,700 | 92 | 77 | |
Pyxidicoccus | ||||||
ppak | Pyxidicoccus parkwayensis | 10,043 | 2,965 | 100 | 2 | |
Stigmatella | ||||||
sur | Stigmatella aurantiaca | 8,352 | 2,980 | 55 | 55 | |
Archangium | ||||||
age | Archangium gephyra | 10,121 | 3,178 | 90 | 88 | |
avm | Archangium violaceum | 10,308 | 3,506 | 100 | 45 | |
Melittangium | ||||||
mbd | Melittangium boletus | 8,018 | 2,918 | 82 | 73 | |
Cystobacter | ||||||
cfus | Cystobacter fuscus | 9,836 | 3,333 | 80 | 72 | |
Vulgatibacter | ||||||
vin | Vulgatibacter incomptus | 3,723 | 1,622 | 59 | 59 | |
Sorangium | ||||||
scl | Sorangium cellulosum So ce56 | 9,375 | 3,180 | 319 | 72 | |
scu | Sorangium cellulosum So0157-2 | 10,400 | 3,245 | 73 | 70 | |
Chondromyces | ||||||
ccro | Chondromyces crocatus | 8,339 | 2,697 | 98 | 90 | |
Polyangium | ||||||
pauu | Polyangium aurulentum | 9,526 | 2,858 | 79 | 17 | |
Minicystis | ||||||
mrm | Minicystis rosea | 14,018 | 3,365 | 99 | 91 | |
Pajaroellobacter | ||||||
pabo | Pajaroellobacter abortibovis | 1,745 | 757 | 49 | ||
Sandaracinus | ||||||
samy | Sandaracinus amylolyticus | 8,961 | 2,607 | 62 | 61 | |
Labilithrix | ||||||
llu | Labilithrix luteola | 11,518 | 2,913 | 71 | 71 | |
Haliangium | ||||||
hoh | Haliangium ochraceum | 6,719 | 2,410 | 55 | 54 | |
Nannocystis | ||||||
nann | Nannocystis punicea | 10,058 | 1,342 | 100 | 1 | |
Bdellovibrionota | ||||||
Bdellovibrio | ||||||
bba | Bdellovibrio bacteriovorus HD100 | 3,583 | 1,602 | 36 | 36 | |
bbat | Bdellovibrio bacteriovorus Tiberius | 3,738 | 1,621 | 41 | 41 | |
bbw | Bdellovibrio bacteriovorus W | 2,871 | 1,354 | 40 | 40 | |
bbac | Bdellovibrio bacteriovorus 109J | 3,589 | 1,627 | 39 | 39 | |
bdq | Bdellovibrio sp. qaytius | 3,150 | 1,336 | 38 | 37 | |
bdc | Bdellovibrio sp. NC01 | 3,773 | 1,628 | 44 | 43 | |
bdz | Bdellovibrio sp. ZAP7 | 3,937 | 1,679 | 44 | 43 | |
bdk | Bdellovibrio sp. KM01 | 3,752 | 1,446 | 44 | 43 | |
brey | Bdellovibrio reynosensis | 3,289 | 1,062 | 43 | 42 | |
Pseudobdellovibrio | ||||||
bex | Pseudobdellovibrio exovorus | 2,618 | 1,270 | 37 | 36 | |
Micavibrio | ||||||
mai | Micavibrio aeruginosavorus ARL-13 | 2,432 | 1,175 | 43 | 43 | |
man | Micavibrio aeruginosavorus EPB | 2,369 | 1,185 | 43 | 43 | |
Halobacteriovorax | ||||||
bmx | Halobacteriovorax marinus | 3,231 | 1,407 | 38 | 38 | |
hax | Halobacteriovorax sp. BALOs_7 | 3,003 | 1,291 | 38 | 22 | |
Bacteriovorax | ||||||
bsto | Bacteriovorax stolpii | 3,728 | 1,531 | 42 | 23 | |
Peredibacter | ||||||
psti | Peredibacter starrii | 4,103 | 1,483 | 44 | 2 | |
Fluviispira | ||||||
sbf | Fluviispira sanaruensis | 3,171 | 1,457 | 60 | 17 | |
Pigmentibacter | ||||||
pij | Pigmentibacter sp. JX0631 | 3,081 | 1,344 | 60 | ||
Silvanigrella | ||||||
saqi | Silvanigrella aquatica | 2,893 | 1,352 | 50 | ||
Thermomicrobiota | ||||||
Thermomicrobium | ||||||
tro | Thermomicrobium roseum | 2,859 | 1,452 | 48 | 48 | |
Sphaerobacter | ||||||
sti | Sphaerobacter thermophilus | 3,485 | 1,754 | 60 | 59 | |
Thermodesulfobiota | ||||||
Thermodesulfobium | ||||||
tnr | Thermodesulfobium narugense | 1,807 | 1,146 | 56 | 55 | |
taci | Thermodesulfobium acidiphilum | 1,753 | 1,115 | 54 | 54 | |
Chlamydiota | ||||||
Chlamydia | ||||||
ctr | Chlamydia trachomatis D/UW-3/CX | Ref | 887 | 560 | 45 | 45 |
ctd | Chlamydia trachomatis D-EC | 878 | 561 | 43 | 43 | |
ctf | Chlamydia trachomatis D-LC | 878 | 561 | 43 | 43 | |
ctrd | Chlamydia trachomatis D/SotonD1 | 902 | 564 | 44 | 44 | |
ctro | Chlamydia trachomatis D/SotonD5 | 899 | 565 | 44 | 44 | |
ctrt | Chlamydia trachomatis D/SotonD6 | 899 | 565 | 44 | 44 | |
cta | Chlamydia trachomatis A/HAR-13 | 919 | 569 | 42 | 42 | |
cty | Chlamydia trachomatis A2497 | 879 | 559 | |||
cra | Chlamydia trachomatis A2497 | 989 | 563 | 43 | 43 | |
ctrq | Chlamydia trachomatis A/363 | 908 | 566 | 44 | 44 | |
ctrx | Chlamydia trachomatis A/5291 | 907 | 566 | 44 | 44 | |
ctrz | Chlamydia trachomatis A/7249 | 906 | 566 | 44 | 44 | |
ctrp | Chlamydia trachomatis L1/1322/p2 | 898 | 564 | 44 | 44 | |
ctlj | Chlamydia trachomatis L1/115 | 897 | 564 | 44 | 44 | |
ctlx | Chlamydia trachomatis L1/224 | 898 | 564 | 44 | 44 | |
ctll | Chlamydia trachomatis L1/440/LN | 892 | 560 | 44 | 44 | |
ctb | Chlamydia trachomatis L2/434/Bu | Ref | 874 | 561 | 43 | 43 |
ctrr | Chlamydia trachomatis L2/25667R | 890 | 561 | 44 | 44 | |
ctlf | Chlamydia trachomatis L2/434/Bu(f) | 910 | 554 | 43 | 43 | |
ctli | Chlamydia trachomatis L2/434/Bu(i) | 910 | 554 | 43 | 43 | |
ctl | Chlamydia trachomatis L2b/UCH-1/proctitis | 874 | 560 | 43 | ||
ctru | Chlamydia trachomatis L2b/UCH-2 | 898 | 564 | 44 | 44 | |
ctrl | Chlamydia trachomatis L2b/LST | 898 | 564 | 44 | 44 | |
ctrv | Chlamydia trachomatis L2b/CV204 | 898 | 564 | 44 | 44 | |
ctrm | Chlamydia trachomatis L2b/Ams1 | 898 | 564 | 44 | 44 | |
ctla | Chlamydia trachomatis L2b/Ams2 | 898 | 564 | 44 | 44 | |
ctlm | Chlamydia trachomatis L2b/Ams3 | 898 | 564 | 44 | 44 | |
ctls | Chlamydia trachomatis L2b/Ams4 | 898 | 564 | 44 | 44 | |
ctlz | Chlamydia trachomatis L2b/Ams5 | 898 | 564 | 44 | 44 | |
ctlc | Chlamydia trachomatis L2b/Canada1 | 903 | 562 | 44 | 44 | |
ctln | Chlamydia trachomatis L2b/Canada2 | 900 | 564 | 42 | 42 | |
ctlb | Chlamydia trachomatis L2b/795 | 898 | 564 | 44 | 44 | |
ctlq | Chlamydia trachomatis L2b/8200/07 | 898 | 564 | 44 | 44 | |
cto | Chlamydia trachomatis L2c | 954 | 554 | 43 | 43 | |
ctrn | Chlamydia trachomatis L3/404/LN | 895 | 564 | 44 | 44 | |
ctj | Chlamydia trachomatis B/Jali20/OT | 875 | 560 | |||
ctz | Chlamydia trachomatis B/TZ1A828/OT | 880 | 559 | |||
ctg | Chlamydia trachomatis E/11023 | 926 | 559 | 43 | 43 | |
ctk | Chlamydia trachomatis E/150 | 927 | 560 | 43 | 43 | |
csw | Chlamydia trachomatis Sweden2 | 875 | 559 | 28 | 28 | |
ces | Chlamydia trachomatis E/SW3 | 876 | 559 | 29 | 29 | |
ctrb | Chlamydia trachomatis E/Bour | 904 | 563 | 44 | 44 | |
ctre | Chlamydia trachomatis E/SotonE4 | 901 | 564 | 44 | 44 | |
ctrs | Chlamydia trachomatis E/SotonE8 | 905 | 561 | 44 | 44 | |
ctec | Chlamydia trachomatis E/C599 | 882 | 560 | 30 | 30 | |
cfs | Chlamydia trachomatis F/SW4 | 873 | 558 | 42 | 41 | |
cfw | Chlamydia trachomatis F/SW5 | 875 | 558 | 40 | 39 | |
ctfw | Chlamydia trachomatis F/SWFPminus | 886 | 562 | 47 | 47 | |
ctrf | Chlamydia trachomatis F/SotonF3 | 900 | 564 | 44 | 44 | |
ctch | Chlamydia trachomatis F/11-96 | 928 | 558 | 43 | 43 | |
ctn | Chlamydia trachomatis G/11074 | 919 | 562 | 43 | 43 | |
ctq | Chlamydia trachomatis G/11222 | 927 | 560 | 43 | 43 | |
ctv | Chlamydia trachomatis G/9301 | 921 | 563 | 43 | 43 | |
ctw | Chlamydia trachomatis G/9768 | 920 | 562 | 43 | 43 | |
ctrg | Chlamydia trachomatis G/SotonG1 | 900 | 564 | 44 | 44 | |
ctri | Chlamydia trachomatis IU824 | 883 | 560 | 6 | 6 | |
ctra | Chlamydia trachomatis IU888 | 885 | 561 | 6 | 6 | |
ctrh | Chlamydia trachomatis Ia/SotonIa1 | 902 | 565 | 44 | 44 | |
ctrj | Chlamydia trachomatis Ia/SotonIa3 | 902 | 565 | 44 | 44 | |
ctrk | Chlamydia trachomatis K/SotonK1 | 900 | 565 | 44 | 44 | |
ctjt | Chlamydia trachomatis J/6276tet1 | 956 | 576 | 46 | 46 | |
ctcf | Chlamydia trachomatis RC-F/69 | 924 | 560 | 43 | 43 | |
ctfs | Chlamydia trachomatis RC-F(s)/342 | 951 | 572 | 46 | 46 | |
cthf | Chlamydia trachomatis RC-F(s)/852 | 954 | 572 | 46 | 46 | |
ctcj | Chlamydia trachomatis RC-J/943 | 926 | 562 | 43 | 43 | |
cthj | Chlamydia trachomatis RC-J/953 | 920 | 562 | 43 | 43 | |
ctmj | Chlamydia trachomatis RC-J/966 | 926 | 562 | 43 | 43 | |
cttj | Chlamydia trachomatis RC-J/971 | 925 | 562 | 43 | 43 | |
ctjs | Chlamydia trachomatis RC-J(s)/122 | 935 | 569 | 43 | 43 | |
ctrc | Chlamydia trachomatis RC-L2/55 | 927 | 562 | 43 | 43 | |
ctrw | Chlamydia trachomatis RC-L2(s)/3 | 919 | 563 | 43 | 43 | |
ctry | Chlamydia trachomatis RC-L2(s)/46 | 925 | 562 | 43 | 43 | |
ctct | Chlamydia trachomatis C/TW-3 | 928 | 560 | 44 | 44 | |
cmu | Chlamydia muridarum Nigg | 911 | 562 | 43 | 43 | |
cmur | Chlamydia muridarum Nigg CM972 | 924 | 563 | 44 | 44 | |
cmn | Chlamydia muridarum Nigg 2 MCR | 888 | 561 | 44 | 44 | |
cmm | Chlamydia muridarum Nigg3 clone G0.1.1 | 887 | 560 | 44 | 44 | |
cmg | Chlamydia muridarum Nigg3 clone G28.38.1 | 891 | 562 | 44 | 44 | |
cmx | Chlamydia muridarum Nigg3 | 894 | 562 | 44 | 44 | |
cmz | Chlamydia muridarum Nigg3 CMUT3-5 | 924 | 563 | 44 | 44 | |
cpn | Chlamydia pneumoniae CWL029 | Ref | 1,052 | 572 | 43 | 35 |
cpa | Chlamydia pneumoniae AR39 | 1,110 | 573 | 41 | 41 | |
cpj | Chlamydia pneumoniae J138 | 1,069 | 580 | 38 | 36 | |
cpt | Chlamydia pneumoniae TW-183 | 1,113 | 578 | 41 | 41 | |
clp | Chlamydia pneumoniae LPCoLN | 1,105 | 574 | 41 | 41 | |
cpm | Chlamydia pecorum E58 | 988 | 573 | 41 | 41 | |
cpec | Chlamydia pecorum P787 | 925 | 579 | 41 | 41 | |
cpeo | Chlamydia pecorum PV3056/3 | 921 | 578 | 41 | 41 | |
cper | Chlamydia pecorum W73 | 925 | 578 | 41 | 41 | |
chp | Chlamydia psittaci 6BC | 975 | 583 | 41 | 41 | |
chb | Chlamydia psittaci 6BC | 1,009 | 588 | 41 | 41 | |
chs | Chlamydia psittaci 01DC11 | 975 | 585 | 41 | 41 | |
chi | Chlamydia psittaci 02DC15 | 978 | 584 | 41 | 41 | |
cht | Chlamydia psittaci 08DC60 | 973 | 585 | 41 | 41 | |
chc | Chlamydia psittaci C19/98 | 978 | 585 | 41 | 41 | |
chr | Chlamydia psittaci RD1 | 951 | 583 | 42 | 37 | |
cpsc | Chlamydia psittaci CP3 | 1,124 | 586 | 41 | 41 | |
cpsn | Chlamydia psittaci NJ1 | 1,052 | 586 | 41 | 41 | |
cpsb | Chlamydia psittaci 84/55 | 1,127 | 582 | 41 | 41 | |
cpsg | Chlamydia psittaci GR9 | 1,042 | 577 | 41 | 41 | |
cpsm | Chlamydia psittaci M56 | 1,049 | 580 | 41 | 41 | |
cpsi | Chlamydia psittaci MN | 1,041 | 584 | 41 | 41 | |
cpsv | Chlamydia psittaci VS225 | 1,116 | 582 | 41 | 41 | |
cpsw | Chlamydia psittaci WC | 1,054 | 583 | 41 | 41 | |
cpst | Chlamydia psittaci WS/RT/E30 | 1,052 | 582 | 41 | 41 | |
cpsd | Chlamydia psittaci 01DC12 | 959 | 589 | 42 | 41 | |
cpsa | Chlamydia psittaci Mat116 | 1,017 | 580 | 41 | 41 | |
cav | Chlamydia avium | 947 | 557 | 47 | 46 | |
cca | Chlamydia caviae | 1,005 | 586 | 3 | 3 | |
cab | Chlamydia abortus S26/3 | 932 | 580 | 42 | 42 | |
cabo | Chlamydia abortus AB7 | 933 | 581 | 42 | 42 | |
cfe | Chlamydia felis Fe/C-56 | 1,013 | 597 | 41 | 41 | |
cgz | Chlamydia gallinacea | 900 | 562 | 46 | 46 | |
chla | Chlamydia poikilotherma | 981 | 584 | 46 | 44 | |
csui | Chlamydia suis | 994 | 575 | 43 | 37 | |
cbue | Chlamydia buteonis | 952 | 587 | 44 | 38 | |
csee | Chlamydia serpentis | 992 | 574 | 44 | 38 | |
ccrd | Chlamydia crocodili | 1,020 | 589 | 44 | 3 | |
cpaa | Chlamydophila parapsittaci | 956 | 587 | 44 | ||
csaz | Candidatus Chlamydia sanziniae | 1,004 | 566 | 41 | ||
Protochlamydia | ||||||
pcu | Candidatus Protochlamydia amoebophila | 1,841 | 899 | 45 | 45 | |
pnl | Candidatus Protochlamydia naegleriophila | 2,575 | 1,095 | 55 | 55 | |
Parachlamydia | ||||||
puv | Parachlamydia acanthamoebae | 2,788 | 1,092 | 53 | 53 | |
Neochlamydia | ||||||
ney | Neochlamydia sp. S13 | 2,174 | 821 | 44 | 43 | |
Waddlia | ||||||
wch | Waddlia chondrophila | 1,956 | 968 | 43 | 43 | |
Simkania | ||||||
sng | Simkania negevensis | 2,518 | 942 | 42 | 41 | |
Rhabdochlamydia | ||||||
rhaw | Candidatus Rhabdochlamydia oedothoracis | 1,569 | 748 | 47 | 17 | |
rpor | Candidatus Rhabdochlamydia porcellionis | 1,348 | 696 | 46 | 18 | |
Verrucomicrobiota | ||||||
Opitutus | ||||||
ote | Opitutus terrae | 4,612 | 2,047 | 72 | 70 | |
Lacunisphaera | ||||||
obg | Lacunisphaera limnophila | 3,510 | 1,674 | 57 | 50 | |
Nibricoccus | ||||||
vbh | Nibricoccus aquaticus HZ-65 | 3,763 | 1,794 | 52 | 40 | |
Horticoccus | ||||||
ole | Horticoccus luteus | 3,393 | 1,512 | 52 | 16 | |
Synoicihabitans | ||||||
slom | Synoicihabitans lomoniglobus | 4,543 | 1,795 | 64 | 1 | |
Ereboglobus | ||||||
elut | Ereboglobus luteus | 2,883 | 1,246 | 57 | 1 | |
Actomonas | ||||||
aaqw | Actomonas aquatica | 4,627 | 1,861 | 52 | 1 | |
Termitidicoccus | ||||||
tmv | Termitidicoccus mucosus | 5,504 | 1,949 | 52 | 1 | |
unclassified Opitutaceae | ||||||
obt | Opitutaceae bacterium TAV5 | 6,071 | 2,090 | 52 | 51 | |
unclassified Opitutales | ||||||
oba | Opitutales bacterium ASA1 | 4,638 | 1,953 | 52 | ||
Coraliomargarita | ||||||
caa | Coraliomargarita akajimensis | 3,120 | 1,424 | 56 | 55 | |
calg | Coraliomargarita algicola | 4,306 | 1,624 | 56 | ||
Ruficoccus | ||||||
rufi | Ruficoccus sp. ZRK36 | 3,226 | 1,369 | 54 | 16 | |
Rubellicoccus | ||||||
puo | Rubellicoccus peritrichatus | 4,367 | 1,509 | 47 | 3 | |
Pelagisphaera | ||||||
ppht | Candidatus Pelagisphaera phototrophica | 3,512 | 1,379 | 50 | 3 | |
Moanabacter | ||||||
mtar | Candidatus Moanabacter tarae | 2,235 | 1,156 | 52 | ||
Akkermansia | ||||||
amu | Akkermansia muciniphila | 2,138 | 1,103 | 63 | 63 | |
agl | Akkermansia glycaniphila | 2,532 | 1,099 | 59 | 49 | |
abiw | Akkermansia biwaensis | 2,544 | 960 | 63 | 6 | |
amak | Akkermansia massiliensis | 2,558 | 1,105 | 65 | 5 | |
Roseimicrobium | ||||||
roo | Roseimicrobium sp. ORNL1 | 6,280 | 1,988 | 76 | 34 | |
Luteolibacter | ||||||
luo | Luteolibacter luteus | 5,176 | 1,814 | 60 | 39 | |
lamb | Luteolibacter ambystomatis | 4,112 | 1,519 | 59 | 26 | |
lui | Luteolibacter sp. LG18 | 4,598 | 1,112 | 66 | ||
lup | Luteolibacter sp. Populi | 5,301 | 1,659 | 60 | 1 | |
Sulfuriroseicoccus | ||||||
soa | Sulfuriroseicoccus oceanibius | 2,772 | 1,290 | 71 | 26 | |
Verrucomicrobium | ||||||
veg | Verrucomicrobium sp. GAS474 | 3,204 | 1,397 | 52 | ||
Fontisphaera | ||||||
fpes | Fontisphaera persica | 3,473 | 1,367 | 53 | 2 | |
Xiphinematobacter | ||||||
xii | Candidatus Xiphinematobacter sp. Idaho Grape | 817 | 585 | 49 | 22 | |
Methylacidiphilum | ||||||
min | Methylacidiphilum infernorum | 2,472 | 1,171 | 52 | 52 | |
mkc | Methylacidiphilum kamchatkense | 2,119 | 1,166 | 53 | 45 | |
mfh | Candidatus Methylacidiphilum fumarolicum | 2,400 | 1,141 | 68 | 1 | |
mcao | Methylacidiphilum caldifontis | 2,003 | 1,138 | 52 | 1 | |
Methylacidimicrobium | ||||||
meap | Methylacidimicrobium sp. AP8 | 2,347 | 1,230 | 71 | 14 | |
Pinguicoccus | ||||||
psup | Candidatus Pinguicoccus supinus | 222 | 92 | 35 | 1 | |
unclassified Verrucomicrobia | ||||||
vba | Verrucomicrobia bacterium IMCC26134 | 2,640 | 1,411 | 54 | 50 | |
vbs | Verrucomicrobia bacterium S94 | 3,474 | 1,612 | 59 | 35 | |
Planctomycetota | ||||||
Rhodopirellula | ||||||
rba | Rhodopirellula baltica | 7,325 | 1,885 | 80 | 70 | |
rhoi | Rhodopirellula sp. P2 | 5,039 | 1,729 | 48 | ||
Pirellula | ||||||
psl | Pirellula staleyi | 4,717 | 1,709 | 52 | 51 | |
pir | Pirellula sp. SH-Sr6A | 5,328 | 1,772 | 92 | 37 | |
Roseimaritima | ||||||
rul | Roseimaritima ulvae | 5,815 | 2,062 | 99 | 36 | |
rml | Roseimaritima multifibrata | 5,471 | 1,831 | 79 | 16 | |
Mariniblastus | ||||||
mff | Mariniblastus fucicola | 5,123 | 1,870 | 72 | 31 | |
Rosistilla | ||||||
rol | Rosistilla oblonga | 5,226 | 2,018 | 67 | 29 | |
ruv | Rosistilla ulvae | 5,427 | 1,807 | 63 | ||
rcf | Rosistilla carotiformis | 5,515 | 1,818 | 52 | ||
Aureliella | ||||||
ahel | Aureliella helgolandensis | 6,418 | 2,107 | 103 | 38 | |
Lignipirellula | ||||||
lcre | Lignipirellula cremea | 7,010 | 2,287 | 155 | 28 | |
Anatilimnocola | ||||||
aagg | Anatilimnocola aggregata | 7,033 | 2,192 | 88 | 15 | |
Bremerella | ||||||
bvo | Bremerella volcania | 5,264 | 1,904 | 111 | 31 | |
brem | Bremerella sp. P1 | 5,528 | 1,799 | 84 | 1 | |
Rubripirellula | ||||||
rlc | Rubripirellula lacrimiformis | 6,438 | 1,993 | 54 | 17 | |
Stieleria | ||||||
smam | Stieleria maiorica | 6,920 | 2,012 | 88 | 1 | |
snep | Stieleria neptunia | 7,797 | 2,146 | 107 | ||
smae | Stieleria magnilauensis | 7,858 | 2,200 | 111 | ||
Thermogutta | ||||||
ttf | Thermogutta terrifontis | 4,504 | 1,409 | 55 | 31 | |
Lacipirellula | ||||||
lpav | Lacipirellula parvula | 6,199 | 1,935 | 59 | 35 | |
llh | Lacipirellula limnantheis | 5,526 | 1,681 | 93 | ||
Aeoliella | ||||||
amuc | Aeoliella mucimassa | 5,351 | 1,867 | 59 | 40 | |
Pirellulimonas | ||||||
pnd | Pirellulimonas nuda | 5,137 | 1,953 | 65 | 26 | |
Adhaeretor | ||||||
amob | Adhaeretor mobilis | 4,890 | 1,657 | 86 | 16 | |
Botrimarina | ||||||
bmei | Botrimarina mediterranea | 4,591 | 1,648 | 59 | 1 | |
Bythopirellula | ||||||
bgok | Bythopirellula goksoeyrii | 5,306 | 1,698 | 83 | 2 | |
Planctopirus | ||||||
plm | Planctopirus limnophila | 4,258 | 1,589 | 69 | 64 | |
peh | Planctopirus ephydatiae | 4,038 | 1,564 | 82 | 59 | |
Rubinisphaera | ||||||
pbs | Rubinisphaera brasiliensis | 4,750 | 1,762 | 54 | 53 | |
Planctomyces | ||||||
pls | Planctomyces sp. SH-PL14 | 6,521 | 1,998 | 78 | 59 | |
plh | Planctomyces sp. SH-PL62 | 5,274 | 1,888 | 76 | 46 | |
Fuerstiella | ||||||
fmr | Fuerstiella marisgermanici | 6,627 | 2,168 | 83 | 33 | |
Gimesia | ||||||
gmr | Gimesia maris | 5,986 | 2,031 | 72 | 37 | |
gim | Gimesia benthica | 5,977 | 2,093 | 67 | 37 | |
gpn | Gimesia panareensis | 6,132 | 2,177 | 72 | 38 | |
gfm | Gimesia fumaroli | 6,068 | 1,870 | 69 | 1 | |
gaz | Gimesia alba | 6,036 | 1,564 | 72 | 1 | |
gaw | Gimesia aquarii | 5,756 | 1,768 | 83 | 1 | |
gax | Gimesia algae | 6,186 | 1,620 | 70 | 1 | |
Maioricimonas | ||||||
mri | Maioricimonas rarisocia | 5,829 | 2,104 | 84 | 33 | |
Symmachiella | ||||||
sdyn | Symmachiella dynata | 6,143 | 2,137 | 78 | 33 | |
Polystyrenella | ||||||
plon | Polystyrenella longa | 4,607 | 1,744 | 54 | 32 | |
Alienimonas | ||||||
acaf | Alienimonas californiensis | 4,309 | 1,446 | 73 | ||
Stratiformator | ||||||
svp | Stratiformator vulcanicus | 4,300 | 1,433 | 57 | ||
Thalassoglobus | ||||||
tpol | Thalassoglobus polymorphus | 4,874 | 1,580 | 48 | ||
Calycomorphotria | ||||||
chya | Calycomorphotria hydatis | 4,301 | 1,487 | 70 | ||
Caulifigura | ||||||
ccos | Caulifigura coniformis | 5,524 | 1,681 | 62 | ||
Planctellipticum | ||||||
pvar | Planctellipticum variicoloris | 5,608 | 1,795 | 56 | 1 | |
Crateriforma | ||||||
ccop | Crateriforma conspicua | 5,437 | 1,728 | 54 | ||
Schlesneria | ||||||
schl | Schlesneria sp. DSM 10557 | 4946 | 60 | |||
Gemmata | ||||||
ges | Gemmata sp. SH-PL17 | 7,704 | 2,160 | 112 | 34 | |
gog | Gemmata obscuriglobus | 6,994 | 2,056 | 94 | 34 | |
gms | Gemmata massiliana | 8,577 | 2,330 | 81 | 33 | |
Tuwongella | ||||||
tim | Tuwongella immobilis | 5,233 | 1,734 | 69 | 38 | |
Limnoglobus | ||||||
lrs | Limnoglobus roseus | 7,982 | 2,340 | 98 | 34 | |
Frigoriglobus | ||||||
ftj | Frigoriglobus tundricola | 8,854 | 2,454 | 81 | 31 | |
Urbifossiella | ||||||
uli | Urbifossiella limnaea | 6,237 | 2,016 | 121 | 18 | |
Telmatocola | ||||||
tsph | Telmatocola sphagniphila | 5,213 | 1,848 | 54 | 7 | |
Isosphaera | ||||||
ipa | Isosphaera pallida | 3,722 | 1,521 | 60 | 58 | |
Singulisphaera | ||||||
saci | Singulisphaera acidiphila | 7,251 | 2,293 | 107 | 74 | |
Paludisphaera | ||||||
pbor | Paludisphaera borealis | 5,720 | 2,041 | 88 | 47 | |
Aquisphaera | ||||||
agv | Aquisphaera giovannonii | 7,803 | 2,461 | 117 | 46 | |
Tautonia | ||||||
tpla | Tautonia plasticadhaerens | 7,556 | 1,920 | 115 | 1 | |
Engelhardtia | ||||||
pbap | Engelhardtia mirabilis | 5,240 | 1,612 | 60 | 1 | |
Kuenenia | ||||||
kst | Candidatus Kuenenia stuttgartiensis | 4,035 | 1,558 | 52 | 29 | |
Brocadia | ||||||
broc | Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2 | 2,734 | 1,316 | 53 | 13 | |
bpit | Candidatus Brocadia pituitae | 3,593 | 1,508 | 51 | 7 | |
Jettenia | ||||||
jet | Candidatus Jettenia sp. | 3,173 | 1,386 | 57 | 6 | |
Phycisphaera | ||||||
phm | Phycisphaera mikurensis | 3,284 | 1,407 | 52 | 51 | |
Poriferisphaera | ||||||
pcor | Poriferisphaera corsica | 3,659 | 1,449 | 51 | 8 | |
Mucisphaera | ||||||
mcad | Mucisphaera calidilacus | 2,856 | 1,284 | 55 | 12 | |
Sedimentisphaera | ||||||
pbu | Sedimentisphaera cyanobacteriorum L21-RPul-D3 | 2,282 | 1,154 | 57 | 32 | |
pbp | Sedimentisphaera salicampi | 2,371 | 1,167 | 64 | 31 | |
Limihaloglobus | ||||||
pbas | Limihaloglobus sulfuriphilus | 2,931 | 1,308 | 57 | 38 | |
Anaerohalosphaera | ||||||
alus | Anaerohalosphaera lusitana | 3,493 | 1,440 | 62 | 23 | |
Humisphaera | ||||||
hbs | Humisphaera borealis | 5,290 | 1,883 | 79 | 25 | |
Uabimicrobium | ||||||
uam | Candidatus Uabimicrobium amorphum | 6,660 | 2,098 | 82 | 11 | |
uhl | Candidatus Uabimicrobium helgolandensis | 6,659 | 1,799 | 101 | ||
Kiritimatiellota | ||||||
Kiritimatiella | ||||||
vbl | Kiritimatiella glycovorans | 2,420 | 1,262 | 69 | 40 | |
Tichowtungia | ||||||
taer | Tichowtungia aerotolerans | 3,080 | 1,355 | 55 | 20 | |
Lentisphaerota | ||||||
Lentisphaera | ||||||
lpro | Lentisphaera profundi | 4,285 | 1,447 | 74 | 1 | |
unclassified Victivallales | ||||||
vbc | Victivallales bacterium CCUG 44730 | 4,164 | 1,607 | 76 | 32 | |
Omnitrophota | ||||||
Velamenicoccus | ||||||
vai | Candidatus Velamenicoccus archaeovorus | 1,852 | 960 | 51 | 11 | |
Spirochaetota | ||||||
Borreliella | ||||||
bbu | Borreliella burgdorferi B31 | Ref | 1,339 | 529 | ||
bbz | Borreliella burgdorferi ZS7 | 1,239 | 560 | 39 | 39 | |
bbn | Borreliella burgdorferi N40 | 1,242 | 581 | 38 | 38 | |
bbj | Borreliella burgdorferi JD1 | 1,458 | 579 | 38 | 38 | |
bbur | Borreliella burgdorferi CA382 | 819 | 548 | 38 | 38 | |
bga | Borrelia garinii subsp. bavariensis | 932 | 566 | 36 | 36 | |
bgb | Borreliella garinii BgVir | 956 | 568 | 36 | 36 | |
bgn | Borreliella garinii NMJW1 | 813 | 552 | 36 | 36 | |
bgs | Borreliella garinii SZ | 804 | 552 | 37 | 36 | |
bgc | Borreliella garinii CIP 103362 | 1,052 | 575 | 40 | 40 | |
baf | Borrelia afzelii (FLI) | 1,215 | 584 | 38 | 38 | |
bafz | Borrelia afzelii (Maryland) | 1,455 | 588 | 38 | 38 | |
bafh | Borreliella afzelii HLJ01 | 892 | 550 | 36 | 36 | |
baft | Borreliella afzelii Tom3107 | 902 | 567 | 38 | 38 | |
bafe | Borreliella afzelii K78 | 1,308 | 591 | 44 | 42 | |
bbs | Borreliella bissettii | 1,463 | 580 | 38 | 38 | |
bvt | Borreliella valaisiana | 899 | 569 | 38 | 38 | |
bchi | Borreliella chilensis | 898 | 565 | 37 | 37 | |
bmay | Borreliella mayonii | 1,134 | 571 | 40 | 40 | |
btud | Borreliella turdi | 1,152 | 567 | 41 | 3 | |
bku | Borreliella kurtenbachii | 1,306 | 560 | 40 | 2 | |
bff | Borreliella finlandensis | 1,067 | 555 | 40 | 2 | |
blus | Borreliella lusitaniae | 1,117 | 562 | 41 | 2 | |
bame | Borreliella americana | 1,049 | 553 | 40 | 2 | |
byn | Borreliella yangtzensis | 1,443 | 561 | 40 | 2 | |
bjo | Borreliella japonica | 1,389 | 558 | 40 | 2 | |
bspi | Borreliella spielmanii | 1,310 | 564 | 41 | 2 | |
blan | Borreliella lanei | 1,113 | 558 | 40 | ||
bcaf | Borreliella californiensis | 1,230 | 552 | 41 | 2 | |
batn | Borreliella tanukii | 911 | 558 | 41 | 2 | |
bcaz | Borreliella carolinensis | 1,391 | 558 | 40 | 2 | |
band | Borreliella andersonii | 1,107 | 544 | 44 | 2 | |
bsin | Borreliella sinica | 1,145 | 553 | 40 | ||
Borrelia | ||||||
btu | Borrelia turicatae | 1,035 | 589 | 34 | 34 | |
bhr | Borrelia hermsii DAH | 819 | 574 | 34 | 34 | |
bhi | Borrelia hermsii CC1 | 818 | 573 | 36 | 36 | |
bdu | Borrelia duttonii | 1,305 | 612 | 36 | 36 | |
bre | Borrelia recurrentis | 990 | 584 | 36 | 36 | |
bcw | Borrelia crocidurae | 1,470 | 609 | 36 | 36 | |
bmo | Borrelia miyamotoi LB-2001 | 822 | 560 | 34 | 34 | |
bmiy | Borrelia miyamotoi CT14D4 | 773 | 544 | 35 | 35 | |
bpak | Borrelia parkeri | 825 | 570 | 36 | 36 | |
bane | Borrelia anserina | 917 | 586 | 38 | 37 | |
btur | Borrelia turcica | 1,221 | 612 | 37 | 34 | |
bmat | Borrelia maritima | 934 | 570 | 40 | 31 | |
bcoi | Borrelia coriaceae | 1,656 | 595 | 38 | 34 | |
bpur | Borrelia puertoricensis | 1,835 | 613 | 38 | 34 | |
boq | Borrelia sp. HM | 815 | 552 | 35 | 2 | |
bvw | Borrelia venezuelensis | 1,173 | 607 | 38 | 2 | |
bfai | Candidatus Borrelia fainii | 1,096 | 584 | 35 | 2 | |
bny | Borrelia nietonii | 1,465 | 606 | 38 | ||
borr | Borrelia sp. A-FGy1 | 1,072 | 567 | 37 | ||
Treponema | ||||||
tpa | Treponema pallidum subsp. pallidum Nichols | Ref | 1,031 | 581 | 51 | 49 |
tpw | Treponema pallidum subsp. pallidum Nichols | 978 | 584 | 51 | 51 | |
tpp | Treponema pallidum subsp. pallidum SS14 | 1,028 | 584 | 51 | 51 | |
tpu | Treponema pallidum subsp. pallidum DAL-1 | 1,059 | 588 | 54 | 54 | |
tph | Treponema pallidum subsp. pallidum Chicago | 982 | 555 | 54 | 54 | |
tpo | Treponema pallidum subsp. pallidum Mexico A | 975 | 586 | 54 | 54 | |
tpas | Treponema pallidum subsp. pallidum Sea 81-4 | 977 | 571 | 51 | 51 | |
tpc | Treponema pallidum subsp. pertenue CDC2 | 1,068 | 592 | 54 | 54 | |
tpg | Treponema pallidum subsp. pertenue Gauthier | 1,068 | 592 | 54 | 54 | |
tpm | Treponema pallidum subsp. pertenue SamoaD | 1,068 | 591 | 54 | 54 | |
tpb | Treponema pallidum Fribourg-Blanc | 1,065 | 591 | 54 | 54 | |
tde | Treponema denticola | Ref | 2,767 | 1,166 | 52 | 45 |
tsu | Treponema succinifaciens | 2,608 | 1,206 | 63 | 63 | |
tbe | Treponema brennaborense | 2,531 | 1,388 | 61 | 61 | |
tpi | Treponema primitia | 3,522 | 1,723 | 58 | 58 | |
tpl | Treponema paraluiscuniculi Cuniculi A | 1,010 | 588 | 54 | 54 | |
tpaa | Treponema paraluiscuniculi L2 | 1,005 | 583 | 54 | 2 | |
tped | Treponema pedis | 2,778 | 1,209 | 51 | 51 | |
tpk | Treponema putidum | 2,225 | 1,089 | 49 | 49 | |
trm | Treponema sp. OMZ 838 | 2,236 | 1,101 | 54 | 54 | |
tphg | Treponema phagedenis | 2,920 | 1,305 | 55 | 52 | |
trz | Treponema vincentii | 2,492 | 1,139 | 59 | 59 | |
trc | Treponema rectale | 2,364 | 1,217 | 74 | 33 | |
tri | Treponema ruminis | 2,449 | 1,181 | 59 | 17 | |
tpav | Treponema parvum | 2,251 | 1,353 | 56 | 26 | |
tmed | Treponema medium | 2,308 | 1,145 | 57 | 42 | |
tper | Treponema peruense | 2,397 | 1,156 | 68 | 18 | |
tsk | Treponema socranskii subsp. buccale | 2,409 | 976 | 60 | 5 | |
trp | Treponema sp. OMZ 803 | 2,394 | 1,184 | 58 | 4 | |
Brucepastera | ||||||
bpaa | Brucepastera parasyntrophica | 2,792 | 850 | 56 | 48 | |
Sediminispirochaeta | ||||||
ssm | Sediminispirochaeta smaragdinae | 4,219 | 2,315 | 57 | 56 | |
Spirochaeta | ||||||
sta | Spirochaeta thermophila DSM 6192 | 2,203 | 1,312 | 52 | 52 | |
stq | Spirochaeta thermophila DSM 6578 | 2,264 | 1,376 | 54 | 54 | |
sfc | Spirochaeta africana | 2,782 | 1,499 | 56 | 55 | |
Thiospirochaeta | ||||||
sper | Thiospirochaeta perfilievii | 3,299 | 1,692 | 84 | 47 | |
Salinispira | ||||||
slr | Salinispira pacifica | 3,397 | 1,644 | 50 | 45 | |
Oceanispirochaeta | ||||||
ock | Oceanispirochaeta crateris | 3,520 | 1,970 | 72 | 44 | |
Entomospira | ||||||
ecul | Entomospira culicis | 1,623 | 792 | 50 | 3 | |
enem | Entomospira nematocerorum | 1,536 | 791 | 49 | ||
eet | Entomospira entomophila | 1,685 | 812 | 48 | ||
Haliotispira | ||||||
hpri | Candidatus Haliotispira prima | 2,430 | 955 | 54 | ||
Sphaerochaeta | ||||||
sbu | Sphaerochaeta globosa | 3,017 | 1,724 | 65 | 64 | |
sgp | Sphaerochaeta pleomorpha | 3,159 | 1,870 | 67 | 66 | |
sass | Sphaerochaeta associata | 3,238 | 1,781 | 61 | 15 | |
Parasphaerochaeta | ||||||
scc | Parasphaerochaeta coccoides | 1,822 | 1,172 | 58 | 58 | |
Leadbettera | ||||||
taz | Leadbettera azotonutricia | 3,474 | 1,646 | 56 | 55 | |
Gracilinema | ||||||
scd | Gracilinema caldarium | 2,789 | 1,578 | 59 | 59 | |
Breznakiella | ||||||
bhc | Breznakiella homolactica | 4,074 | 2,044 | 58 | 48 | |
Leptospira | ||||||
lil | Leptospira interrogans serovar Lai 56601 | Ref | 3,706 | 1,284 | 42 | 42 |
lie | Leptospira interrogans serovar Lai IPAV | 3,714 | 1,365 | 42 | 42 | |
lic | Leptospira interrogans serovar Copenhageni | 3,658 | 1,295 | 42 | 42 | |
lis | Leptospira interrogans serovar Linhai | 4,141 | 1,385 | 42 | 42 | |
lbj | Leptospira borgpetersenii JB197 | 2,880 | 1,279 | 42 | 42 | |
lbl | Leptospira borgpetersenii L550 | 2,945 | 1,321 | 42 | 42 | |
lbi | Leptospira biflexa serovar Patoc Patoc 1 (Paris) | 3,726 | 1,527 | 45 | 42 | |
lbf | Leptospira biflexa serovar Patoc Patoc 1 (Ames) | 3,600 | 1,520 | 41 | 41 | |
lst | Leptospira santarosai | 4,080 | 1,332 | 43 | 43 | |
laj | Leptospira tipperaryensis | 4,255 | 1,556 | 45 | 45 | |
lmay | Leptospira mayottensis | 3,555 | 1,355 | 44 | 44 | |
lkm | Leptospira kmetyi | 4,035 | 1,519 | 45 | 45 | |
lwl | Leptospira weilii | 3,905 | 1,324 | 44 | 44 | |
lkb | Leptospira kobayashii | 3,902 | 1,504 | 43 | 13 | |
lno | Leptospira noguchii | 3,732 | 1,284 | 44 | 8 | |
lkr | Leptospira kirschneri | 3,887 | 1,306 | 44 | 1 | |
lmil | Leptospira milleri | 3,555 | 1,401 | 43 | ||
liow | Leptospira iowaensis | 3,812 | 1,471 | 44 | ||
lgor | Leptospira gorisiae | 3,939 | 1,386 | 45 | ||
lmgo | Leptospira mgodei | 3,752 | 1,473 | 43 | ||
lcin | Leptospira cinconiae | 3,741 | 1,437 | 45 | ||
Turneriella | ||||||
tpx | Turneriella parva | 4,139 | 1,599 | 45 | 45 | |
Brachyspira | ||||||
bhy | Brachyspira hyodysenteriae WA1 | 2,644 | 1,321 | 38 | 38 | |
bhd | Brachyspira hyodysenteriae ATCC 27164 | 2,600 | 1,326 | 39 | 39 | |
brm | Brachyspira murdochii | 2,809 | 1,354 | 41 | 40 | |
bpo | Brachyspira pilosicoli 95/1000 | 2,301 | 1,219 | 37 | 37 | |
bpj | Brachyspira pilosicoli B2904 | 2,658 | 1,288 | 38 | 37 | |
bpip | Brachyspira pilosicoli P43/6/78 | 2,208 | 1,153 | 36 | 36 | |
bpw | Brachyspira pilosicoli WesB | 2,641 | 1,328 | 38 | 37 | |
bip | Brachyspira intermedia | 2,872 | 1,361 | 36 | 36 | |
bhp | Brachyspira hampsonii | 2,713 | 1,340 | 39 | 36 | |
Thermospira | ||||||
taqu | Thermospira aquatica | 2,352 | 623 | 56 | 2 | |
Acidobacteriota | ||||||
Korobacter | ||||||
aba | Candidatus Koribacter versatilis | 4,777 | 2,062 | 52 | 51 | |
Acidobacterium | ||||||
aca | Acidobacterium capsulatum | 3,382 | 1,675 | 57 | 51 | |
Granulicella | ||||||
acm | Granulicella tundricola | 4,542 | 1,913 | 53 | 52 | |
gma | Granulicella mallensis | 4,815 | 2,020 | 54 | 53 | |
grw | Granulicella sp. WH15 | 3,704 | 1,764 | 55 | 46 | |
grb | Granulicella sp. 5B5 | 3,200 | 1,080 | 54 | 46 | |
Terriglobus | ||||||
tsa | Terriglobus saanensis | 4,180 | 1,846 | 55 | 53 | |
trs | Terriglobus roseus | 4,245 | 1,876 | 61 | 61 | |
talb | Terriglobus albidus | 5,010 | 2,175 | 53 | 47 | |
Acidisarcina | ||||||
abas | Acidisarcina polymorpha | 7,071 | 2,376 | 49 | 46 | |
Edaphobacter | ||||||
eda | Edaphobacter sp. 12200R-103 | 3,689 | 1,781 | 55 | 50 | |
edg | Edaphobacter sp. 4G125 | 3,505 | 1,292 | 57 | 2 | |
epl | Edaphobacter paludis | 3,310 | 1,552 | 55 | 1 | |
Alloacidobacterium | ||||||
adin | Alloacidobacterium dinghuense | 5,132 | 2,033 | 57 | 50 | |
Occallatibacter | ||||||
orp | Occallatibacter riparius | 5,461 | 1,374 | 57 | 15 | |
Tunturiibacter | ||||||
tgi | Tunturiibacter gelidiferens | 4,547 | 1,792 | 54 | 1 | |
temp | Tunturiibacter empetritectus | 4,113 | 1,671 | 54 | 1 | |
tpsc | Tunturiibacter psychrotolerans | 4,588 | 1,813 | 54 | 1 | |
Chloracidobacterium | ||||||
ctm | Chloracidobacterium thermophilum | 3,054 | 1,526 | 49 | 49 | |
cvl | Chloracidobacterium validum | 2,928 | 1,484 | 53 | 48 | |
chlo | Chloracidobacterium sp. MS 40/45 | 2,930 | 1,506 | 53 | 48 | |
Solibacter | ||||||
sus | Candidatus Solibacter usitatus | 7,826 | 2,971 | 62 | 57 | |
Paludibaculum | ||||||
pfer | Paludibaculum fermentans | 7,469 | 2,941 | 61 | 28 | |
Luteitalea | ||||||
abac | Luteitalea pratensis | 6,200 | 2,420 | 65 | 54 | |
lub | Luteitalea sp. TBR-22 | 5,364 | 2,105 | 59 | 3 | |
Thermotomaculum | ||||||
thyd | Thermotomaculum hydrothermale | 2,015 | 1,208 | 50 | 25 | |
Sulfidibacter | ||||||
scor | Sulfidibacter corallicola | 6,923 | 2,478 | 70 | 24 | |
Geothrix | ||||||
gex | Geothrix oryzae | 2,926 | 1,504 | 58 | 1 | |
gep | Geothrix sp. PMB-07 | 3,641 | 1,740 | 58 | 2 | |
get | Geothrix sp. L227-G1 | 3,254 | 1,149 | 57 | 2 | |
Mesoterricola | ||||||
msil | Mesoterricola silvestris | 4,216 | 1,956 | 64 | 6 | |
msea | Mesoterricola sediminis | 3,849 | 1,775 | 62 | 5 | |
Elusimicrobiota | ||||||
Elusimicrobium | ||||||
emi | Elusimicrobium minutum | 1,529 | 833 | 50 | 50 | |
Endomicrobium | ||||||
epo | Endomicrobium proavitum | 1,341 | 820 | 49 | 49 | |
Endomicrobiellum | ||||||
eti | Candidatus Endomicrobiellum trichonymphae Rs-D17 | 740 | 596 | 48 | 48 | |
rsd | Candidatus Endomicrobiellum trichonymphae Rs-D17 genomovar Ri2008 | 776 | 608 | 48 | 48 | |
Fibrobacterota | ||||||
Fibrobacter | ||||||
fsu | Fibrobacter succinogenes | 3,085 | 1,332 | 69 | 69 | |
fsc | Fibrobacter succinogenes | 2,871 | 1,253 | 70 | 70 | |
Gemmatimonadota | ||||||
Gemmatimonas | ||||||
gau | Gemmatimonas aurantiaca | 3,935 | 1,849 | 54 | 54 | |
gph | Gemmatimonas phototrophica | 3,388 | 1,638 | 54 | 47 | |
ggr | Gemmatimonas groenlandica | 4,352 | 1,869 | 56 | 42 | |
Gemmatirosa | ||||||
gba | Gemmatirosa kalamazoonensis | 6,335 | 2,507 | 54 | 43 | |
Pseudogemmatithrix | ||||||
pspc | Pseudogemmatithrix spongiicola | 2,907 | 1,435 | 52 | ||
Gaopeijia | ||||||
gmt | Gaopeijia maritima | 3,586 | 1,523 | 53 | ||
Bacteroidota | ||||||
Bacteroides | ||||||
bth | Bacteroides thetaiotaomicron VPI-5482 | Ref | 4,825 | 1,720 | 86 | 85 |
btho | Bacteroides thetaiotaomicron 7330 | 5,071 | 1,808 | 88 | 80 | |
bfr | Bacteroides fragilis YCH46 | Ref | 4,625 | 1,572 | 92 | 91 |
bfs | Bacteroides fragilis NCTC 9343 | 4,236 | 1,606 | 91 | 91 | |
bfg | Bacteroides fragilis 638R | 4,291 | 1,630 | 91 | 91 | |
bfb | Bacteroides fragilis BOB25 | 4,112 | 1,593 | 89 | 87 | |
bhl | Bacteroides helcogenes | 3,244 | 1,431 | 83 | 83 | |
bxy | Bacteroides xylanisolvens | 4,407 | 1,680 | 59 | 55 | |
boa | Bacteroides ovatus | 4,910 | 1,947 | 87 | 86 | |
bcel | Bacteroides cellulosilyticus | 5,475 | 2,064 | 79 | 76 | |
bcac | Bacteroides caccae | 3,550 | 1,543 | 88 | 74 | |
bcae | Bacteroides caecimuris | 3,799 | 1,483 | 87 | 77 | |
bzg | Bacteroides zoogleoformans | 2,595 | 1,260 | 75 | 63 | |
bhf | Bacteroides heparinolyticus | 2,770 | 1,333 | 77 | 67 | |
bis | Bacteroides intestinalis | 4,239 | 1,798 | 79 | 68 | |
bun | Bacteroides uniformis | 4,084 | 1,742 | 77 | 66 | |
beg | Bacteroides eggerthii | 4,368 | 1,537 | 75 | 66 | |
bste | Bacteroides stercoris | 3,081 | 1,362 | 83 | 69 | |
bfe | Bacteroides faecis | 4,800 | 1,687 | 88 | ||
bno | Bacteroides nordii | 4,168 | 1,588 | 87 | 73 | |
bhum | Bacteroides humanifaecis | 3,335 | 1,486 | 77 | 66 | |
bfc | Bacteroides faecium | 4,993 | 1,679 | 91 | 8 | |
bsal | Bacteroides salyersiae | 4,024 | 1,480 | 92 | 7 | |
bfin | Bacteroides finegoldii | 5,862 | 1,306 | 86 | ||
bace | Bacteroides sp. CACC 737 | 3,503 | 1,533 | 83 | ||
Phocaeicola | ||||||
bvu | Phocaeicola vulgatus | 4,065 | 1,733 | 106 | 102 | |
bsa | Phocaeicola salanitronis | 3,641 | 1,392 | 101 | 101 | |
bdo | Phocaeicola dorei HS1_L_1_B_010 | 4,519 | 1,816 | 105 | 105 | |
bdh | Phocaeicola dorei HS1_L_3_B_079 | 4,024 | 1,783 | 100 | 100 | |
pcop | Phocaeicola coprophilus | 3,325 | 1,412 | 115 | 115 | |
Porphyromonas | ||||||
pgi | Porphyromonas gingivalis W83 | 1,909 | 988 | 65 | 65 | |
pgn | Porphyromonas gingivalis ATCC 33277 | 2,090 | 1,029 | 65 | 65 | |
pgt | Porphyromonas gingivalis TDC60 | 2,220 | 1,022 | 65 | 65 | |
pah | Porphyromonas asaccharolytica | 1,699 | 913 | 55 | 55 | |
pcre | Porphyromonas crevioricanis | 1,807 | 870 | 69 | 69 | |
pcag | Porphyromonas cangingivalis | 2,033 | 1,046 | 62 | 62 | |
pend | Porphyromonas endodontalis | 1,688 | 839 | 61 | 61 | |
psoe | Porphyromonas somerae | 2,251 | 951 | 54 | 54 | |
porp | Porphyromonas sp. oral taxon 275 | 1,685 | 705 | 60 | 20 | |
Microbacter | ||||||
mica | Microbacter sp. GSS18 | 3,657 | 1,749 | 56 | 31 | |
Fermentimonas | ||||||
pbt | Fermentimonas caenicola | 2,405 | 1,274 | 50 | 49 | |
Petrimonas | ||||||
pmuc | Petrimonas mucosa | 3,000 | 1,469 | 90 | 55 | |
pet | Petrimonas sp. IBARAKI | 2,992 | 1,507 | 54 | 54 | |
Proteiniphilum | ||||||
psac | Proteiniphilum saccharofermentans | 3,450 | 1,680 | 54 | 54 | |
proj | Proteiniphilum propionicum | 3,141 | 1,168 | 56 | 27 | |
Dysgonomonas | ||||||
dys | Dysgonomonas sp. HDW5A | 3,463 | 1,564 | 64 | 62 | |
dyh | Dysgonomonas sp. HDW5B | 3,527 | 1,472 | 61 | 1 | |
Limibacterium | ||||||
lfg | Limibacterium fermenti | 3,482 | 1,419 | 58 | ||
Azobacteroides | ||||||
aps | Candidatus Azobacteroides pseudotrichonymphae | 852 | 613 | 42 | 42 | |
Paludibacter | ||||||
ppn | Paludibacter propionicigenes | 3,020 | 1,445 | 64 | 63 | |
Parabacteroides | ||||||
pdi | Parabacteroides distasonis | 3,850 | 1,733 | 104 | 103 | |
parc | Parabacteroides sp. CT06 | 4,386 | 1,790 | 104 | 104 | |
pmer | Parabacteroides merdae | 3,955 | 1,493 | 100 | 74 | |
pgol | Parabacteroides goldsteinii | 5,449 | 1,875 | 96 | 77 | |
pjo | Parabacteroides johnsonii | 3,712 | 1,546 | 98 | 77 | |
pfai | Parabacteroides faecis | 5,098 | 1,650 | 103 | 14 | |
pabc | Parabacteroides absconsus | 3,010 | 1,296 | 106 | ||
Tannerella | ||||||
tfo | Tannerella forsythia | 3,001 | 1,209 | 54 | 54 | |
toh | Tannerella serpentiformis | 2,355 | 1,037 | 54 | 54 | |
Muribaculum | ||||||
pary | Muribaculum intestinale | 2,641 | 1,162 | 69 | 69 | |
mgod | Muribaculum gordoncarteri | 2,873 | 1,187 | 71 | ||
Duncaniella | ||||||
dun | Duncaniella sp. B8 | 2,772 | 1,186 | 74 | 68 | |
ddb | Duncaniella dubosii | 2,992 | 1,095 | 69 | ||
duq | Duncaniella sp. C9 | 2,784 | 1,124 | 72 | 1 | |
Paramuribaculum | ||||||
pii | Paramuribaculum intestinale | 2,618 | 1,100 | 72 | 1 | |
Barnesiella | ||||||
bvs | Barnesiella viscericola | 2,512 | 1,160 | 78 | 78 | |
Coprobacter | ||||||
copr | Coprobacter secundus subsp. similis | 3,277 | 1,498 | 81 | 81 | |
cfas | Coprobacter fastidiosus | 2,662 | 1,234 | 83 | ||
Odoribacter | ||||||
osp | Odoribacter splanchnicus | 3,497 | 1,547 | 74 | 74 | |
Butyricimonas | ||||||
buy | Butyricimonas faecalis | 4,135 | 1,608 | 75 | 75 | |
bvir | Butyricimonas virosa | 3,836 | 1,725 | 76 | 75 | |
bfh | Butyricimonas faecihominis | 3,851 | 1,562 | 78 | ||
Prevotella | ||||||
pmz | Prevotella melaninogenica | 2,296 | 1,071 | 66 | 66 | |
pdn | Prevotella denticola | 2,386 | 1,053 | 67 | 67 | |
pit | Prevotella intermedia | 2,266 | 934 | 64 | 64 | |
pdt | Prevotella dentalis | 2,544 | 1,163 | 86 | 78 | |
pro | Prevotella sp. oral taxon 299 | 1,960 | 937 | 61 | 61 | |
pfus | Prevotella fusca | 2,430 | 1,054 | 62 | 62 | |
pje | Prevotella jejuni | 2,875 | 1,137 | 62 | 62 | |
pni | Prevotella nigrescens | 2,292 | 946 | 63 | 38 | |
pmuf | Prevotella multiformis | 2,215 | 981 | 66 | 36 | |
phis | Prevotella histicola | 2,248 | 1,054 | 65 | 37 | |
pher | Prevotella herbatica | 2,651 | 1,216 | 75 | 39 | |
pvf | Prevotella veroralis | 2,288 | 960 | 66 | 32 | |
pscj | Prevotella scopos | 2,437 | 1,002 | 64 | 18 | |
pcou | Prevotella communis | 2,826 | 1,129 | 74 | ||
pbiv | Prevotella bivia | 1,975 | 947 | 65 | ||
Xylanibacter | ||||||
pru | Xylanibacter ruminicola | 2,763 | 1,311 | 67 | 67 | |
Segatella | ||||||
pcoi | Segatella copri | 2,853 | 1,182 | 81 | 46 | |
poc | Segatella oris | 2,703 | 1,123 | 76 | 61 | |
pby | Segatella bryantii | 2,670 | 1,219 | 112 | 55 | |
shoi | Segatella hominis | 3,213 | 1,223 | 91 | ||
sbao | Segatella baroniae | 2,766 | 1,216 | 112 | ||
Hoylesella | ||||||
peo | Hoylesella enoeca | 2,333 | 1,000 | 61 | 56 | |
pbuc | Hoylesella buccalis | 2,576 | 916 | 63 | 4 | |
Pseudoprevotella | ||||||
alq | Pseudoprevotella muciniphila | 2,274 | 1,009 | 61 | 46 | |
Paraprevotella | ||||||
pclr | Paraprevotella clara | 3,033 | 1,097 | 93 | 3 | |
Alistipes | ||||||
afd | Alistipes finegoldii | 3,110 | 1,276 | 68 | 59 | |
ash | Alistipes shahii | 2,563 | 1,043 | 53 | 48 | |
ald | Alistipes sp. dk3624 | 2,454 | 1,186 | 56 | 43 | |
aok | Alistipes onderdonkii subsp. vulgaris | 2,923 | 1,257 | 56 | 54 | |
acou | Alistipes communis | 2,675 | 1,179 | 59 | 50 | |
ada | Alistipes dispar | 2,414 | 1,174 | 55 | 48 | |
ait | Alistipes indistinctus | 2,463 | 1,196 | 50 | 44 | |
aput | Alistipes putredinis | 1,422 | 404 | 51 | 40 | |
asen | Alistipes senegalensis | 3,135 | 1,160 | 59 | 53 | |
aiu | Alistipes ihumii | 2,167 | 933 | 54 | 20 | |
Mucinivorans | ||||||
rbc | Mucinivorans hirudinis | 3,015 | 1,208 | 45 | 45 | |
Tenuifilum | ||||||
ttz | Tenuifilum thalassicum | 2,559 | 1,306 | 55 | 39 | |
Salinivirga | ||||||
blq | Salinivirga cyanobacteriivorans | 3,865 | 1,626 | 58 | 58 | |
unclassified Bacteroidales | ||||||
bacc | Bacteroidales bacterium CF | 2,310 | 1,185 | 46 | 46 | |
Draconibacterium | ||||||
dori | Draconibacterium orientale | 3,971 | 1,849 | 52 | 52 | |
drc | Draconibacterium halophilum | 3,846 | 1,817 | 52 | 51 | |
Maribellus | ||||||
mcos | Maribellus comscasis | 6,176 | 2,579 | 54 | 54 | |
Aquipluma | ||||||
anf | Aquipluma nitroreducens | 5,029 | 1,847 | 59 | 3 | |
Halosquirtibacter | ||||||
hlam | Halosquirtibacter laminarini | 3,333 | 1,415 | 204 | ||
hxy | Halosquirtibacter xylanolyticus | 3,628 | 1,492 | 173 | ||
Alkalitalea | ||||||
asx | Alkalitalea saponilacus | 3,569 | 1,646 | 63 | 58 | |
Xiashengella | ||||||
alkq | Xiashengella succiniciproducens | 2,506 | 1,252 | 61 | 48 | |
Labilibaculum | ||||||
mbas | Labilibaculum antarcticum | 4,331 | 1,957 | 105 | 87 | |
Chitinophaga | ||||||
cpi | Chitinophaga pinensis | 7,192 | 2,727 | 98 | 97 | |
cbae | Chitinophaga caeni | 4,331 | 1,816 | 76 | 69 | |
chit | Chitinophaga sp. XS-30 | 4,859 | 2,147 | 59 | 53 | |
chih | Chitinophaga agri | 6,115 | 2,544 | 101 | 74 | |
coy | Chitinophaga oryzae | 6,560 | 2,282 | 96 | 69 | |
cfil | Chitinophaga filiformis | 6,384 | 2,216 | 81 | 61 | |
chf | Chitinophaga pendula | 5,658 | 1,915 | 64 | 54 | |
chor | Chitinophaga horti | 5,061 | 1,824 | 75 | 3 | |
csac | Chitinophaga sancti | 6,555 | 2,270 | 79 | 3 | |
cpol | Chitinophaga pollutisoli | 5,080 | 1,855 | 78 | 2 | |
chim | Chitinophaga sp. MD30 | 5,694 | 1,987 | 65 | 1 | |
Niastella | ||||||
nko | Niastella koreensis | 7,174 | 2,648 | 78 | 75 | |
Niabella | ||||||
nso | Niabella soli | 4,110 | 1,751 | 45 | 45 | |
nia | Niabella ginsenosidivorans | 4,619 | 1,893 | 52 | 52 | |
nyn | Niabella yanshanensis | 4,518 | 1,740 | 50 | ||
ndf | Niabella defluvii | 8,432 | 914 | 52 | ||
Flavisolibacter | ||||||
fla | Flavisolibacter tropicus | 4,598 | 1,735 | 52 | 52 | |
fgg | Flavisolibacter ginsenosidimutans | 4,251 | 1,793 | 46 | 46 | |
Arachidicoccus | ||||||
arb | Arachidicoccus sp. BS20 | 2,971 | 1,389 | 45 | 45 | |
ark | Arachidicoccus soli | 3,352 | 1,676 | 51 | 51 | |
agi | Arachidicoccus ginsenosidivorans | 4,073 | 1,608 | 59 | 59 | |
atee | Arachidicoccus terrestris | 3,724 | 1,637 | 59 | 59 | |
Rhizosphaericola | ||||||
arac | Rhizosphaericola mali | 3,953 | 1,784 | 68 | 65 | |
Filimonas | ||||||
fln | Filimonas lacunae | 6,363 | 2,333 | 85 | 78 | |
Paraflavitalea | ||||||
pseg | Paraflavitalea soli | 6,418 | 2,468 | 61 | 44 | |
Panacibacter | ||||||
pgin | Panacibacter ginsenosidivorans | 4,571 | 1,912 | 53 | 47 | |
Pseudobacter | ||||||
pgo | Pseudobacter ginsenosidimutans | 5,941 | 2,612 | 57 | 42 | |
Phnomibacter | ||||||
fls | Phnomibacter ginsenosidimutans | 3,423 | 1,405 | 47 | 46 | |
Lacibacter | ||||||
lacs | Lacibacter sediminis | 4,252 | 1,851 | 54 | 49 | |
Ferruginibacter | ||||||
fei | Ferruginibacter albus | 3,151 | 1,206 | 46 | 44 | |
flp | Ferruginibacter lapsinanis | 2,852 | 1,256 | 50 | 43 | |
Flavihumibacter | ||||||
flc | Flavihumibacter fluvii | 4,273 | 1,717 | 43 | 43 | |
flv | Flavihumibacter rivuli | 3,582 | 1,513 | 46 | 46 | |
Sediminibacterium | ||||||
sedt | Sediminibacterium sp. TEGAF015 | 2,687 | 978 | 45 | 13 | |
Thermoflavifilum | ||||||
theo | Thermoflavifilum sp. | 2,328 | 1,211 | 50 | ||
Mycovorax | ||||||
cbam | Mycovorax composti | 2,839 | 653 | 47 | ||
Haliscomenobacter | ||||||
hhy | Haliscomenobacter hydrossis | 6,752 | 2,302 | 60 | 59 | |
Saprospira | ||||||
sgn | Saprospira grandis | 4,251 | 1,240 | 64 | 61 | |
Aureispira | ||||||
aup | Aureispira anguillae | 6,411 | 1,030 | 82 | 7 | |
Parvibacillus | ||||||
pcau | Candidatus Parvibacillus calidus | 3102 | 45 | |||
Pedobacter | ||||||
phe | Pedobacter heparinus | 4,252 | 1,953 | 52 | 52 | |
pep | Pedobacter sp. PACM 27299 | 4,986 | 2,201 | 98 | 98 | |
pcm | Pedobacter cryoconitis | 4,922 | 2,064 | 88 | 88 | |
psty | Pedobacter steynii | 5,362 | 2,270 | 79 | 78 | |
pgs | Pedobacter ginsengisoli | 4,399 | 1,958 | 72 | 71 | |
pej | Pedobacter aquae | 3,144 | 1,452 | 67 | 52 | |
pek | Pedobacter sp. KBS0701 | 5,039 | 2,108 | 76 | 63 | |
proe | Pedobacter roseus | 5,098 | 2,136 | 71 | 53 | |
pex | Pedobacter endophyticus | 4,320 | 1,696 | 63 | 47 | |
pmuo | Pedobacter mucosus | 4,071 | 1,506 | 60 | 41 | |
prk | Pedobacter riviphilus | 4,553 | 1,662 | 65 | 21 | |
pgj | Pedobacter gandavensis | 5,144 | 2,063 | 107 | 5 | |
pev | Pedobacter sp. D749 | 4,712 | 1,848 | 73 | ||
pedo | Pedobacter sp. WC2423 | 4,936 | 1,957 | 86 | ||
Pseudopedobacter | ||||||
psn | Pseudopedobacter saltans | 3,792 | 1,725 | 67 | 64 | |
Sphingobacterium | ||||||
shg | Sphingobacterium sp. 21 | 5,169 | 2,262 | 68 | 68 | |
sht | Sphingobacterium sp. ML3W | 4,093 | 1,774 | 114 | 114 | |
sphn | Sphingobacterium sp. B29 | 5,103 | 2,158 | 96 | 95 | |
smiz | Sphingobacterium mizutaii | 4,018 | 1,728 | 68 | 68 | |
spsc | Sphingobacterium psychroaquaticum | 3,518 | 1,710 | 85 | 85 | |
sphz | Sphingobacterium sp. CZ-2 | 3,324 | 1,564 | 61 | 61 | |
sphe | Sphingobacterium zhuxiongii | 3,501 | 1,687 | 70 | 62 | |
spdr | Sphingobacterium sp. DR205 | 5,917 | 2,374 | 110 | 91 | |
sdj | Sphingobacterium daejeonense | 5,557 | 1,756 | 68 | 58 | |
stha | Sphingobacterium thalpophilum | 5,165 | 2,155 | 105 | 85 | |
sspi | Sphingobacterium spiritivorum | 4,238 | 1,686 | 73 | 53 | |
smui | Sphingobacterium multivorum | 5,062 | 2,007 | 109 | 72 | |
ssiy | Sphingobacterium siyangense | 5,607 | 2,123 | 107 | 72 | |
sfae | Sphingobacterium faecium | 4,120 | 1,532 | 119 | 23 | |
sbam | Sphingobacterium bambusae | 4,526 | 1,725 | 86 | 2 | |
sop | Sphingobacterium oryzagri | 4,123 | 1,704 | 85 | 2 | |
sprz | Sphingobacterium sp. R2 | 4,328 | 1,780 | 106 | 3 | |
Solitalea | ||||||
scn | Solitalea canadensis | 4,310 | 1,862 | 74 | 74 | |
slas | Solitalea lacus | 3,654 | 1,531 | 82 | ||
Mucilaginibacter | ||||||
mup | Mucilaginibacter sp. PAMC 26640 | 4,758 | 1,902 | 59 | 59 | |
muc | Mucilaginibacter xinganensis | 4,924 | 1,936 | 53 | 53 | |
mgot | Mucilaginibacter gotjawali | 4,459 | 1,708 | 48 | 46 | |
muh | Mucilaginibacter celer | 5,888 | 2,299 | 70 | 70 | |
mgin | Mucilaginibacter ginsenosidivorans | 4,740 | 1,919 | 55 | 53 | |
mgk | Mucilaginibacter ginsenosidivorax | 6,249 | 2,438 | 67 | 66 | |
mrub | Mucilaginibacter rubeus | 6,135 | 2,506 | 73 | 72 | |
mgos | Mucilaginibacter gossypii | 6,294 | 2,436 | 69 | 67 | |
mmab | Mucilaginibacter mali | 5,080 | 2,054 | 57 | 53 | |
mgik | Mucilaginibacter ginkgonis | 3,365 | 1,499 | 49 | 48 | |
mdj | Mucilaginibacter daejeonensis | 4,069 | 1,601 | 62 | 61 | |
mrob | Mucilaginibacter robiniae | 4,254 | 1,284 | 60 | 59 | |
mjj | Mucilaginibacter jinjuensis | 5,262 | 1,477 | 66 | 64 | |
msab | Mucilaginibacter sabulilitoris | 6,289 | 2,187 | 57 | ||
muy | Mucilaginibacter sp. cycad4 | 5,817 | 2,119 | 65 | ||
Anseongella | ||||||
agd | Anseongella ginsenosidimutans | 3,448 | 1,557 | 57 | 57 | |
Olivibacter | ||||||
oli | Olivibacter sp. LS-1 | 5,222 | 2,331 | 66 | 65 | |
unclassified Sphingobacteriaceae | ||||||
sbx | Sphingobacteriaceae bacterium GW460-11-11-14-LB5 | 4,963 | 2,084 | 72 | 72 | |
Cyclobacterium | ||||||
cmr | Cyclobacterium marinum | 5,000 | 1,995 | 50 | 50 | |
camu | Cyclobacterium amurskyense | 4,768 | 1,966 | 53 | 53 | |
cxi | Cyclobacterium xiamenense | 4,648 | 1,684 | 51 | ||
Belliella | ||||||
bbd | Belliella baltica | 3,680 | 1,636 | 53 | 53 | |
Echinicola | ||||||
evi | Echinicola vietnamensis | 4,547 | 1,992 | 59 | 56 | |
est | Echinicola strongylocentroti | 4,695 | 2,014 | 60 | 60 | |
echi | Echinicola soli | 4,155 | 1,880 | 59 | 58 | |
emai | Echinicola marina | 4,485 | 1,454 | 60 | 59 | |
Algoriphagus | ||||||
alm | Algoriphagus sanaruensis | 3,377 | 1,550 | 50 | 50 | |
algo | Algoriphagus sp. NBT04N3 | 4,054 | 1,607 | 50 | ||
ahao | Algoriphagus halophytocola | 3,892 | 1,537 | 53 | ||
ahap | Algoriphagus halophilus | 4,898 | 1,188 | 50 | ||
Mongoliitalea | ||||||
mda | Mongoliitalea daihaiensis | 3,935 | 1,542 | 62 | 59 | |
Cytophaga | ||||||
chu | Cytophaga hutchinsonii | 3,785 | 1,457 | 48 | 48 | |
Spirosoma | ||||||
sli | Spirosoma linguale | 6,938 | 2,560 | 63 | 61 | |
srd | Spirosoma radiotolerans | 5,328 | 2,146 | 50 | 50 | |
smon | Spirosoma montaniterrae | 4,815 | 1,913 | 50 | 47 | |
spir | Spirosoma pollinicola | 7,286 | 2,537 | 49 | 46 | |
spik | Spirosoma sp. KCTC 42546 | 6,896 | 2,609 | 55 | 55 | |
spib | Spirosoma aureum | 6,956 | 2,737 | 59 | 55 | |
stae | Spirosoma taeanense | 4,641 | 1,971 | 51 | 51 | |
srho | Spirosoma rhododendri | 4,743 | 1,723 | 54 | 53 | |
soq | Spirosoma oryzicola | 6,019 | 2,047 | 56 | ||
sfol | Spirosoma foliorum | 7,126 | 2,287 | 55 | 1 | |
senf | Spirosoma endbachense | 8,128 | 2,622 | 52 | ||
Rhodocytophaga | ||||||
rhoz | Rhodocytophaga rosea | 7,114 | 2,400 | 59 | 54 | |
Aquirufa | ||||||
psez | Aquirufa nivalisilvae | 2,628 | 1,310 | 46 | 46 | |
aanh | Aquirufa antheringensis | 2,163 | 934 | 48 | 48 | |
alen | Aquirufa lenticrescens | 2,195 | 929 | 48 | 48 | |
Leadbetterella | ||||||
lby | Leadbetterella byssophila | 3,465 | 1,581 | 53 | 53 | |
Emticicia | ||||||
eol | Emticicia oligotrophica | 4,267 | 1,808 | 48 | 48 | |
emz | Emticicia sp. 21SJ11W-3 | 4,281 | 1,605 | 48 | ||
Arcticibacterium | ||||||
als | Arcticibacterium luteifluviistationis | 4,331 | 1,792 | 45 | 45 | |
Marinilongibacter | ||||||
maqa | Marinilongibacter aquaticus | 3,885 | 1,075 | 45 | 45 | |
Dyadobacter | ||||||
dfe | Dyadobacter fermentans | 5,719 | 2,270 | 51 | 51 | |
dsn | Dyadobacter sandarakinus | 4,949 | 1,833 | 52 | 52 | |
dyc | Dyadobacter chenhuakuii | 5,046 | 1,780 | 51 | 48 | |
dfq | Dyadobacter fanqingshengii | 5,205 | 1,917 | 49 | 1 | |
dcn | Dyadobacter chenwenxiniae | 6,029 | 1,995 | 50 | 1 | |
dpf | Dyadobacter pollutisoli | 6,330 | 2,199 | 53 | ||
Runella | ||||||
rsi | Runella slithyformis | 5,792 | 2,221 | 51 | 50 | |
run | Runella rosea | 5,825 | 2,190 | 54 | 54 | |
rup | Runella sp. SP2 | 6,008 | 2,259 | 55 | 53 | |
Fibrella | ||||||
fae | Fibrella aestuarina | 5,627 | 2,098 | 76 | 76 | |
fib | Fibrella sp. ES10-3-2-2 | 5,038 | 2,002 | 54 | 53 | |
Bernardetia | ||||||
fli | Bernardetia litoralis | 3,878 | 1,293 | 60 | 59 | |
Hymenobacter | ||||||
hsw | Hymenobacter swuensis | 4,616 | 1,787 | 52 | 52 | |
hym | Hymenobacter sp. APR13 | 4,244 | 1,646 | 54 | 54 | |
hyd | Hymenobacter sp. DG25B | 3,153 | 1,390 | 49 | 49 | |
hye | Hymenobacter sp. DG25A | 2,991 | 1,394 | 50 | 50 | |
hyg | Hymenobacter sedentarius | 3,844 | 1,660 | 53 | 52 | |
hyp | Hymenobacter psoromatis | 4,478 | 1,797 | 57 | 57 | |
hyz | Hymenobacter sp. PAMC 26628 | 4,377 | 1,774 | 53 | 53 | |
hnv | Hymenobacter nivis | 4,252 | 1,751 | 55 | 55 | |
hyh | Hymenobacter oligotrophus | 3,520 | 1,488 | 61 | 61 | |
hyj | Hymenobacter jejuensis | 4,100 | 1,841 | 52 | 52 | |
hqi | Hymenobacter qilianensis | 3,860 | 1,367 | 54 | 54 | |
hrs | Hymenobacter sp. BT18 | 3,939 | 1,653 | 60 | 58 | |
hbn | Hymenobacter busanensis | 4,037 | 1,570 | 56 | 55 | |
hts | Hymenobacter taeanensis | 3,954 | 1,640 | 59 | 59 | |
hmt | Hymenobacter monticola | 5,061 | 1,717 | 57 | 55 | |
htb | Hymenobacter tibetensis | 4,956 | 1,871 | 63 | 63 | |
hyk | Hymenobacter yonginensis | 4,131 | 1,489 | 63 | 63 | |
hsk | Hymenobacter sediminicola | 3,785 | 1,485 | 61 | 1 | |
hcw | Hymenobacter canadensis | 4,280 | 1,568 | 65 | ||
hsb | Hymenobacter sublimis | 3,929 | 1,530 | 58 | 1 | |
haei | Hymenobacter aerilatus | 4,350 | 1,642 | 61 | ||
hcu | Hymenobacter cellulosilyticus | 5,354 | 1,387 | 56 | ||
hvl | Hymenobacter volaticus | 5,721 | 1,693 | 67 | ||
hcf | Hymenobacter cellulosivorans | 5,057 | 1,701 | 58 | ||
Pontibacter | ||||||
pko | Pontibacter korlensis | 4,116 | 1,856 | 62 | 62 | |
pact | Pontibacter actiniarum | 4,221 | 1,840 | 69 | 69 | |
pont | Pontibacter sp. SGAir0037 | 4,457 | 1,814 | 65 | ||
Rufibacter | ||||||
ruf | Rufibacter radiotolerans | 3,457 | 1,619 | 47 | 47 | |
rti | Rufibacter tibetensis | 4,112 | 1,739 | 58 | 58 | |
rud | Rufibacter sp. DG15C | 3,169 | 1,437 | 52 | 52 | |
Nibribacter | ||||||
nib | Nibribacter ruber | 3,596 | 1,576 | 54 | 54 | |
Adhaeribacter | ||||||
add | Adhaeribacter radiodurans | 5,219 | 2,116 | 55 | 54 | |
aswu | Adhaeribacter swui | 4,784 | 2,004 | 55 | 54 | |
Marivirga | ||||||
mtt | Marivirga tractuosa | 3,757 | 1,537 | 49 | 46 | |
mhaa | Marivirga harenae | 3,659 | 1,423 | 48 | 1 | |
marp | Marivirga arenosa | 3,444 | 1,364 | 47 | ||
msaa | Marivirga salinarum | 3,743 | 1,452 | 48 | ||
Mangrovivirga | ||||||
fpf | Mangrovivirga cuniculi | 3,902 | 1,499 | 58 | 56 | |
Flammeovirga | ||||||
flm | Flammeovirga sp. MY04 | 5,475 | 2,037 | 112 | 112 | |
fll | Flammeovirga pectinis | 5,006 | 1,944 | 129 | 129 | |
fya | Flammeovirga yaeyamensis | 5,560 | 2,024 | 117 | 96 | |
fka | Flammeovirga kamogawensis | 5,229 | 1,913 | 132 | 105 | |
Chondrinema | ||||||
clit | Chondrinema litorale | 8,068 | 2,352 | 62 | 2 | |
Imperialibacter | ||||||
iro | Imperialibacter roseus | 5,628 | 1,935 | 49 | 1 | |
unclassified Flammeovirgaceae | ||||||
fbt | Flammeovirgaceae bacterium | 5,387 | 2,078 | 61 | 60 | |
Amoebophilus | ||||||
aas | Candidatus Amoebophilus asiaticus | 1,335 | 569 | 41 | 41 | |
Cardinium | ||||||
che | Cardinium endosymbiont cEper1 of Encarsia pergandiella | 904 | 500 | 41 | 41 | |
cec | Cardinium endosymbiont of Sogatella furcifera | 795 | 480 | 39 | 39 | |
cher | Candidatus Cardinium hertigii | 973 | 428 | 44 | 43 | |
ceng | Cardinium endosymbiont of Oedothorax gibbosus | 670 | 384 | 78 | 7 | |
Chryseotalea | ||||||
chrw | Chryseotalea sp. WA131a | 4,279 | 1,101 | 48 | 47 | |
Chryseolinea | ||||||
chk | Chryseolinea soli | 6,766 | 2,480 | 55 | 55 | |
Fulvivirga | ||||||
fuv | Fulvivirga lutea | 3,616 | 1,488 | 46 | 46 | |
fmm | Fulvivirga maritima | 5,164 | 1,806 | 67 | 2 | |
fua | Fulvivirga ulvae | 5,591 | 1,874 | 54 | 1 | |
flw | Fulvivirga ligni | 5,453 | 1,849 | 50 | 1 | |
Reichenbachiella | ||||||
rek | Reichenbachiella agarivorans | 3,657 | 1,131 | 49 | 25 | |
rcg | Reichenbachiella carrageenanivorans | 3,788 | 1,473 | 49 | ||
Porifericola | ||||||
prho | Porifericola rhodea | 4,450 | 1,645 | 49 | 2 | |
Tunicatimonas | ||||||
tpel | Tunicatimonas pelagia | 6,127 | 1,883 | 53 | 1 | |
Roseivirga | ||||||
rsr | Roseivirga spongicola | 3,870 | 1,526 | 50 | ||
Fulvitalea | ||||||
fax | Fulvitalea axinellae | 5,607 | 1,711 | 132 | ||
Persicobacter | ||||||
ppsv | Persicobacter psychrovividus | 4,797 | 1,719 | 179 | ||
Aureibacter | ||||||
atk | Aureibacter tunicatorum | 5,051 | 1,596 | 147 | ||
Christiangramia | ||||||
gfo | Christiangramia forsetii | 3,584 | 1,546 | 53 | 53 | |
grl | Christiangramia salexigens | 2,604 | 1,320 | 58 | 57 | |
gfl | Christiangramia flava | 3,634 | 1,615 | 54 | 54 | |
grs | Christiangramia fulva | 3,789 | 1,757 | 59 | 58 | |
Flavobacterium | ||||||
fps | Flavobacterium psychrophilum JIP02/86 | Ref | 2,446 | 1,115 | 67 | 67 |
fpc | Flavobacterium psychrophilum CSF259-93 | 2,634 | 1,140 | 67 | 67 | |
fpy | Flavobacterium psychrophilum FPG101 | 2,413 | 1,126 | 68 | 68 | |
fpo | Flavobacterium psychrophilum FPG3 | 2,305 | 1,096 | 68 | 68 | |
fpq | Flavobacterium psychrophilum 950106-1/1 | 2,309 | 1,092 | 42 | 42 | |
fpv | Flavobacterium psychrophilum V3-5 | 2,268 | 1,098 | 44 | 44 | |
fpw | Flavobacterium psychrophilum V4-24 | 2,254 | 1,096 | 42 | 42 | |
fpk | Flavobacterium psychrophilum v4-33 | 2,266 | 1,097 | 43 | 43 | |
fpsz | Flavobacterium psychrophilum Z2 | 3,442 | 1,444 | 58 | 58 | |
fjo | Flavobacterium johnsoniae UW101 | 5,017 | 1,977 | 83 | 82 | |
fjg | Flavobacterium anhuiense | 4,280 | 1,835 | 78 | 76 | |
fbr | Flavobacterium branchiophilum | 2,872 | 1,255 | 53 | 53 | |
fco | Flavobacterium columnare | 2,642 | 1,191 | 89 | 89 | |
fin | Flavobacterium indicum | 2,671 | 1,211 | 67 | 65 | |
fgl | Flavobacterium gilvum | 3,463 | 1,573 | 73 | 72 | |
fcm | Flavobacterium commune | 3,104 | 1,508 | 74 | 73 | |
ffa | Flavobacterium faecale | 3,707 | 1,627 | 87 | 86 | |
fat | Flavobacterium arcticum | 2,621 | 1,166 | 57 | 56 | |
fki | Flavobacterium kingsejongi | 3,683 | 1,521 | 76 | 75 | |
fpal | Flavobacterium pallidum | 2,936 | 1,251 | 59 | 58 | |
fmg | Flavobacterium magnum | 2,956 | 1,243 | 59 | 58 | |
falb | Flavobacterium album | 3,479 | 1,410 | 59 | 58 | |
fcr | Flavobacterium crocinum | 4,879 | 2,012 | 84 | 83 | |
fse | Flavobacterium sediminis | 2,958 | 1,294 | 60 | 55 | |
fsn | Flavobacterium sangjuense | 2,637 | 1,256 | 50 | 50 | |
fnk | Flavobacterium nackdongense | 3,440 | 1,618 | 58 | 57 | |
fak | Flavobacterium alkalisoli | 3,544 | 1,387 | 58 | 57 | |
ffl | Flavobacterium fluviale | 4,065 | 1,717 | 81 | 80 | |
fen | Flavobacterium endoglycinae | 4,613 | 1,805 | 83 | 80 | |
fcv | Flavobacterium covae | 2,779 | 1,216 | 89 | 89 | |
foe | Flavobacterium oreochromis | 2,599 | 905 | 127 | 124 | |
fsd | Flavobacterium sediminilitoris | 3,515 | 1,326 | 62 | 59 | |
flo | Flavobacterium litorale | 2,423 | 1,024 | 57 | 55 | |
fcc | Flavobacterium cyclinae | 2,659 | 1,090 | 58 | 58 | |
fcb | Flavobacterium channae | 2,539 | 1,091 | 57 | 57 | |
fpb | Flavobacterium panici | 4,908 | 1,785 | 82 | 79 | |
feh | Flavobacterium enshiense | 2,863 | 1,156 | 64 | 62 | |
faz | Flavobacterium azooxidireducens | 3,263 | 1,174 | 57 | 54 | |
fbi | Flavobacterium bizetiae | 4,631 | 1,743 | 96 | 94 | |
fcs | Flavobacterium collinsii | 4,282 | 1,523 | 189 | 89 | |
fao | Flavobacterium ammonificans | 2,093 | 1,030 | 52 | 52 | |
fan | Flavobacterium ammoniigenes | 2,009 | 1,016 | 51 | 51 | |
fplu | Flavobacterium plurextorum | 4,747 | 1,781 | 84 | 84 | |
fhu | Flavobacterium humidisoli | 4,635 | 1,764 | 90 | 1 | |
fke | Flavobacterium keumense | 2,175 | 1,075 | 57 | 1 | |
fcu | Flavobacterium cerinum | 3,630 | 1,303 | 78 | 1 | |
fpec | Flavobacterium pectinovorum | 4,859 | 1,811 | 81 | ||
fda | Flavobacterium dauae | 2,699 | 1,127 | 94 | ||
fok | Flavobacterium okayamense | 2,574 | 1,120 | 61 | 1 | |
fag | Flavobacterium agricola | 2,375 | 1,103 | 138 | ||
fav | Flavobacterium acetivorans | 2,980 | 1,375 | 77 | ||
fgc | Flavobacterium galactosidilyticum | 2,940 | 1,339 | 69 | ||
fdv | Flavobacterium davisii | 2,327 | 747 | 132 | ||
fcg | Flavobacterium cupriresistens | 4,444 | 1,610 | 99 | ||
ffv | Flavobacterium flavipigmentatum | 3,600 | 1,458 | 70 | ||
flz | Flavobacterium sp. SLB02 | 4,828 | 1,830 | 63 | ||
fcj | Flavobacterium capsici | 2,721 | 1,136 | 48 | ||
flr | Flavobacterium sp. WV_118_3 | 3,457 | 1,296 | 88 | ||
fnd | Flavobacterium nakdongensis | 1,988 | 992 | 57 | ||
flf | Flavobacterium sp. GSB-24 | 4,458 | 1,751 | 82 | ||
fsf | Flavobacterium soyae | 4,359 | 1,732 | 72 | ||
Capnocytophaga | ||||||
coc | Capnocytophaga ochracea | 2,171 | 1,044 | 62 | 62 | |
ccm | Capnocytophaga canimorsus | 2,405 | 1,033 | 67 | 59 | |
col | Capnocytophaga sp. oral taxon 323 | 2,114 | 1,020 | 60 | 60 | |
chg | Capnocytophaga haemolytica | 2,228 | 1,045 | 64 | 64 | |
capn | Capnocytophaga endodontalis | 2,983 | 1,136 | 63 | 62 | |
cgh | Capnocytophaga gingivalis | 2,577 | 1,019 | 62 | 62 | |
clk | Capnocytophaga leadbetteri | 2,135 | 1,044 | 64 | 64 | |
cspu | Capnocytophaga sputigena | 2,690 | 1,101 | 62 | 61 | |
ccyn | Capnocytophaga cynodegmi | 2,239 | 1,050 | 58 | 57 | |
caph | Capnocytophaga sp. H4358 | 2,126 | 1,073 | 61 | 60 | |
csto | Capnocytophaga stomatis | 2,444 | 1,082 | 58 | 57 | |
capq | Capnocytophaga sp. H2931 | 2,141 | 1,057 | 58 | 57 | |
capf | Capnocytophaga sp. FDAARGOS_737 | 2,279 | 1,055 | 64 | 64 | |
capo | Capnocytophaga sp. oral taxon 902 | 2,273 | 984 | 62 | 62 | |
Robiginitalea | ||||||
rbi | Robiginitalea biformata | 3,211 | 1,431 | 46 | 46 | |
Zunongwangia | ||||||
zpr | Zunongwangia profunda | 4,653 | 1,949 | 56 | 55 | |
Croceibacter | ||||||
cat | Croceibacter atlanticus | 2,702 | 1,264 | 40 | 40 | |
Maribacter | ||||||
fbc | Maribacter sp. HTCC2170 | 3,411 | 1,516 | 44 | 44 | |
marm | Maribacter sp. 1_2014MBL_MicDiv | 3,609 | 1,676 | 45 | 43 | |
mart | Maribacter hydrothermalis | 3,609 | 1,624 | 55 | 54 | |
marb | Maribacter cobaltidurans | 4,049 | 1,725 | 49 | 48 | |
mare | Maribacter sp. MJ134 | 3,383 | 1,540 | 48 | 47 | |
mlio | Maribacter litopenaei | 3,095 | 802 | 49 | 47 | |
Cellulophaga | ||||||
cao | Cellulophaga algicola | 4,163 | 1,741 | 62 | 61 | |
cly | Cellulophaga lytica DSM 7489 | 3,284 | 1,497 | 55 | 54 | |
clh | Cellulophaga lytica HI1 | 3,168 | 1,466 | 53 | 53 | |
cbal | Cellulophaga baltica NN016038 | 3,726 | 1,677 | 56 | 55 | |
cbat | Cellulophaga baltica 18 | 3,755 | 1,671 | 55 | 55 | |
comn | Cellulophaga omnivescoria | 3,191 | 1,383 | 56 | 55 | |
Dokdonia | ||||||
kdi | Dokdonia sp. 4H-3-7-5 | 2,978 | 1,382 | 54 | 54 | |
dok | Dokdonia sp. MED134 | 2,886 | 1,333 | 51 | 51 | |
ddo | Dokdonia donghaensis | 2,881 | 1,339 | 55 | 55 | |
dod | Dokdonia sp. Dokd-P16 | 3,119 | 1,408 | 56 | 55 | |
Lacinutrix | ||||||
lan | Lacinutrix sp. 5H-3-7-4 | 2,967 | 1,335 | 45 | 45 | |
lvn | Lacinutrix venerupis | 2,801 | 1,320 | 46 | 45 | |
laci | Lacinutrix sp. Bg11-31 | 3,181 | 1,399 | 47 | 46 | |
lnu | Lacinutrix neustonica | 3,186 | 710 | 54 | ||
lacw | Lacinutrix sp. WUR7 | 3,375 | 1,399 | 59 | ||
Zobellia | ||||||
zga | Zobellia galactanivorans | 4,733 | 1,977 | 46 | 46 | |
zla | Zobellia laminariae | 4,107 | 1,233 | 53 | ||
Aequorivita | ||||||
asl | Aequorivita sublithincola | 3,140 | 1,337 | 44 | 44 | |
aev | Aequorivita ciconiae | 3,079 | 1,362 | 53 | 47 | |
aic | Aequorivita iocasae | 3,020 | 1,269 | 47 | 46 | |
aequ | Aequorivita marisscotiae | 3,034 | 1,276 | 47 | ||
Psychroflexus | ||||||
ptq | Psychroflexus torquis | 3,526 | 1,497 | 45 | 45 | |
psyd | Psychroflexus sp. ALD_RP9 | 2,336 | 1,106 | 49 | ||
Nonlabens | ||||||
ndo | Nonlabens dokdonensis | 3,618 | 1,360 | 48 | 46 | |
nom | Nonlabens sp. MIC269 | 2,477 | 1,200 | 46 | 46 | |
nsd | Nonlabens tegetincola | 2,475 | 1,166 | 49 | 48 | |
nob | Nonlabens sp. MB-3u-79 | 2,714 | 1,247 | 49 | 48 | |
noj | Nonlabens ponticola | 2,558 | 1,186 | 46 | 45 | |
nul | Nonlabens ulvanivorans | 2,805 | 1,191 | 55 | 3 | |
nmf | Nonlabens marinus | 2,790 | 1,155 | 42 | 1 | |
Polaribacter | ||||||
pom | Polaribacter sp. MED152 | 2,635 | 1,272 | 41 | 41 | |
pob | Polaribacter vadi | 3,223 | 1,537 | 53 | 53 | |
prn | Polaribacter reichenbachii | 3,432 | 1,572 | 53 | 52 | |
pola | Polaribacter sp. BM10 | 2,771 | 1,349 | 68 | 67 | |
poa | Polaribacter sp. ALD11 | 2,982 | 1,454 | 69 | 69 | |
phal | Polaribacter haliotis | 3,192 | 1,488 | 48 | 47 | |
plit | Polaribacter litorisediminis | 3,597 | 1,468 | 52 | 52 | |
ppec | Polaribacter pectinis | 3,011 | 1,331 | 48 | 47 | |
pbat | Polaribacter batillariae | 3,234 | 1,411 | 47 | 45 | |
pcea | Polaribacter cellanae | 3,555 | 1,441 | 49 | 46 | |
pun | Polaribacter sejongensis | 3,565 | 1,453 | 70 | 69 | |
phg | Polaribacter huanghezhanensis | 2,391 | 1,142 | 46 | 1 | |
polq | Polaribacter sp. Q13 | 3,632 | 1,569 | 69 | ||
Myroides | ||||||
myr | Myroides sp. A21 | 3,650 | 1,602 | 136 | 132 | |
mpw | Myroides profundi | 3,548 | 1,513 | 115 | 115 | |
mod | Myroides odoratimimus | 3,828 | 1,639 | 133 | 133 | |
myz | Myroides sp. ZB35 | 3,428 | 1,554 | 135 | 134 | |
moa | Myroides odoratus | 3,506 | 1,385 | 117 | 111 | |
mals | Myroides albus | 3,238 | 1,260 | 139 | 138 | |
mcla | Myroides sp. JBRI-B21084 | 2,311 | 1,053 | 99 | 1 | |
Paenimyroides | ||||||
paae | Paenimyroides aestuarii | 2,728 | 1,120 | 101 | 1 | |
Winogradskyella | ||||||
win | Winogradskyella sp. PG-2 | 3,527 | 1,402 | 55 | 55 | |
wij | Winogradskyella sp. J14-2 | 2,948 | 1,285 | 48 | 47 | |
Siansivirga | ||||||
sze | Siansivirga zeaxanthinifaciens | 2,761 | 1,382 | 53 | 53 | |
Pseudalgibacter | ||||||
ahz | Pseudalgibacter alginicilyticus | 3,256 | 1,533 | 47 | 47 | |
Sediminicola | ||||||
syi | Sediminicola sp. YIK13 | 2,974 | 1,413 | 51 | 51 | |
Tenacibaculum | ||||||
tdi | Tenacibaculum dicentrarchi | 2,420 | 1,178 | 100 | 100 | |
ten | Tenacibaculum todarodis | 2,661 | 1,250 | 53 | 51 | |
tje | Tenacibaculum jejuense | 3,945 | 1,520 | 83 | 67 | |
tmar | Tenacibaculum maritimum | 2,876 | 1,279 | 82 | 77 | |
tmp | Tenacibaculum mesophilum | 2,949 | 1,365 | 75 | 74 | |
tov | Tenacibaculum ovolyticum | 3,663 | 1,234 | 87 | 22 | |
trt | Tenacibaculum retecalamus | 2,511 | 1,127 | 85 | 23 | |
tpac | Tenacibaculum pacificus | 2,327 | 1,070 | 99 | 24 | |
tfi | Tenacibaculum finnmarkense | 2,521 | 1,087 | 88 | 3 | |
ttg | Tenacibaculum tangerinum | 3,086 | 1,224 | 68 | 2 | |
tsig | Tenacibaculum singaporense | 3,101 | 1,293 | 69 | 2 | |
Lutibacter | ||||||
lut | Lutibacter profundi | 2,537 | 1,315 | 47 | 47 | |
Urechidicola | ||||||
lul | Urechidicola croceus | 2,970 | 1,414 | 49 | 48 | |
Wenyingzhuangia | ||||||
wfu | Wenyingzhuangia fucanilytica | 2,752 | 1,368 | 68 | 67 | |
Formosa | ||||||
for | Formosa sp. Hel1_33_131 | 2,628 | 1,113 | 47 | 47 | |
foh | Formosa sp. Hel3_A1_48 | 1,866 | 1,003 | 47 | 46 | |
fop | Formosa sediminum | 3,323 | 1,585 | 62 | 61 | |
Salegentibacter | ||||||
salt | Salegentibacter sp. T436 | 3,499 | 1,695 | 54 | 54 | |
smis | Salegentibacter mishustinae | 3,395 | 1,518 | 58 | 56 | |
Seonamhaeicola | ||||||
seon | Seonamhaeicola sp. S2-3 | 3,170 | 1,513 | 50 | 47 | |
Arenibacter | ||||||
aalg | Arenibacter algicola | 4,932 | 2,051 | 79 | 50 | |
aanr | Arenibacter antarcticus | 3,917 | 1,613 | 53 | ||
Olleya | ||||||
oll | Olleya sp. Bg11-27 | 3,742 | 1,515 | 60 | 52 | |
oaq | Olleya aquimaris | 3,063 | 1,366 | 58 | 47 | |
Flavivirga | ||||||
fek | Flavivirga eckloniae | 4,551 | 1,799 | 52 | 51 | |
fay | Flavivirga abyssicola | 3,854 | 1,487 | 50 | 1 | |
Tamlana | ||||||
tay | Tamlana sp. s12 | 3,144 | 1,386 | 57 | 1 | |
Pseudotamlana | ||||||
taj | Pseudotamlana carrageenivorans | 3,433 | 1,558 | 57 | 56 | |
Pukyongia | ||||||
aue | Pukyongia salina | 2,829 | 1,281 | 48 | 47 | |
Kordia | ||||||
kos | Kordia sp. SMS9 | 4,641 | 1,508 | 79 | 51 | |
kan | Kordia antarctica | 4,697 | 1,596 | 63 | 49 | |
Mariniflexile | ||||||
marf | Mariniflexile sp. TRM1-10 | 4,023 | 1,708 | 47 | 47 | |
mlil | Mariniflexile litorale | 3,771 | 1,583 | 49 | ||
Aquimarina | ||||||
aqb | Aquimarina sp. BL5 | 4,916 | 1,843 | 64 | 63 | |
aqa | Aquimarina sp. AD1 | 4,600 | 1,768 | 67 | 64 | |
aqd | Aquimarina sp. AD10 | 4,980 | 1,862 | 67 | 56 | |
aqe | Aquimarina sp. ERC-38 | 3,573 | 1,285 | 53 | ||
aqr | Aquimarina sp. TRL1 | 4,420 | 1,473 | 68 | 2 | |
Euzebyella | ||||||
emar | Euzebyella marina | 3,971 | 1,759 | 48 | 47 | |
Muriicola | ||||||
mur | Muriicola soli | 2,593 | 1,251 | 49 | 48 | |
Psychroserpens | ||||||
psyn | Psychroserpens sp. NJDZ02 | 3,699 | 1,490 | 71 | 55 | |
ppon | Psychroserpens ponticola | 3,494 | 1,356 | 46 | 1 | |
Antarcticibacterium | ||||||
afla | Antarcticibacterium flavum | 3,585 | 1,589 | 59 | 58 | |
anp | Antarcticibacterium arcticum | 2,942 | 1,394 | 57 | 56 | |
Oceanihabitans | ||||||
oci | Oceanihabitans sp. IOP_32 | 2,787 | 1,396 | 60 | 50 | |
Mesoflavibacter | ||||||
mesq | Mesoflavibacter sp. HG96 | 2,728 | 1,277 | 43 | 40 | |
Galbibacter | ||||||
gaa | Galbibacter sp. BG1 | 3,160 | 1,521 | 57 | 49 | |
Costertonia | ||||||
cagg | Costertonia aggregata | 3,527 | 1,500 | 55 | 53 | |
Constantimarinum | ||||||
alti | Constantimarinum furrinae | 2,654 | 1,216 | 46 | 45 | |
Marixanthomonas | ||||||
marx | Marixanthomonas sp. SCSIO 43207 | 2,728 | 1,207 | 45 | 40 | |
Leeuwenhoekiella | ||||||
lpal | Leeuwenhoekiella palythoae | 3,375 | 1,480 | 53 | 44 | |
Sinomicrobium | ||||||
sinh | Sinomicrobium kalidii | 4,245 | 1,632 | 60 | 48 | |
Aggregatimonas | ||||||
asag | Aggregatimonas sangjinii | 3,856 | 1,511 | 49 | 47 | |
Flagellimonas | ||||||
flg | Flagellimonas sp. HMM57 | 3,575 | 1,496 | 70 | ||
flb | Flagellimonas sp. CMM7 | 3,902 | 1,283 | 49 | 47 | |
mrs | Allomuricauda ruestringensis | 3,432 | 1,549 | 47 | 46 | |
mlt | Flagellimonas lutaonensis | 2,906 | 1,348 | 47 | 47 | |
mut | Flagellimonas oceani | 4,088 | 1,709 | 49 | 47 | |
maqi | Flagellimonas marinaquae | 3,894 | 1,606 | 49 | 47 | |
spon | Flagellimonas maritima | 3,378 | 1,478 | 45 | 44 | |
fld | Flagellimonas sp. MMG031 | 3,357 | 1,424 | 48 | ||
Flaviramulus | ||||||
sabu | Flaviramulus sp. BrNp1-15 | 3,121 | 1,412 | 50 | ||
Zhouia | ||||||
zsp | Zhouia spongiae | 3,308 | 1,430 | 60 | 52 | |
Bizionia | ||||||
bia | Bizionia sp. M204 | 2,958 | 1,289 | 48 | 43 | |
Aureibaculum | ||||||
fbe | Aureibaculum algae | 4,252 | 1,877 | 47 | 45 | |
Abyssalbus | ||||||
fbm | Abyssalbus ytuae | 3,608 | 1,263 | 55 | 54 | |
Salinimicrobium | ||||||
sahn | Salinimicrobium tongyeongense | 2,984 | 1,366 | 58 | 57 | |
sazs | Salinimicrobium sp. 3283s | 3,208 | 1,469 | 58 | ||
Algibacter | ||||||
alut | Algibacter luteus | 3,208 | 1,405 | 50 | 1 | |
Lutimonas | ||||||
luy | Lutimonas zeaxanthinifaciens | 3,087 | 1,378 | 48 | 1 | |
Aestuariibaculum | ||||||
aest | Aestuariibaculum sp. YM273 | 3,134 | 1,407 | 71 | 4 | |
Mangrovimonas | ||||||
mang | Mangrovimonas sp. YM274 | 3,258 | 1,416 | 67 | 2 | |
mcaa | Mangrovimonas cancribranchiae | 2,787 | 1,222 | 49 | 1 | |
Hwangdonia | ||||||
hws | Hwangdonia lutea | 3,330 | 1,425 | 47 | 1 | |
Rasiella | ||||||
mgel | Rasiella rasia | 2,959 | 1,259 | 45 | 41 | |
Thalassobellus | ||||||
tsx | Thalassobellus suaedae | 3,394 | 1,544 | 53 | ||
unclassified Flavobacteriaceae | ||||||
fba | Flavobacteriaceae bacterium 3519-10 | 2,534 | 1,180 | 48 | 48 | |
fbu | Flavobacteriaceae bacterium UJ101 | 2,683 | 1,271 | 55 | 55 | |
fbq | Flavobacteriaceae bacterium AU392 | 3,011 | 1,253 | 45 | 1 | |
Riemerella | ||||||
ran | Riemerella anatipestifer ATCC 11845 = DSM 15868 | 1,972 | 1,020 | 51 | 51 | |
rai | Riemerella anatipestifer ATCC 11845 = DSM 15868 | 1,941 | 983 | 42 | 42 | |
rar | Riemerella anatipestifer RA-GD | 1,985 | 1,001 | 52 | 52 | |
rag | Riemerella anatipestifer RA-CH-1 | 2,187 | 1,028 | 50 | 50 | |
rae | Riemerella anatipestifer RA-CH-2 | 2,044 | 1,027 | 50 | 50 | |
rat | Riemerella anatipestifer CH3 | 2,181 | 1,020 | 50 | 50 | |
rcl | Riemerella columbina | 1,856 | 960 | 47 | ||
Weeksella | ||||||
wvi | Weeksella virosa | 2,049 | 1,072 | 76 | 76 | |
Ornithobacterium | ||||||
orh | Ornithobacterium rhinotracheale DSM 15997 | 2,267 | 1,022 | 54 | 54 | |
ori | Ornithobacterium rhinotracheale ORT-UMN 88 | 2,300 | 1,023 | 53 | 53 | |
ohm | Candidatus Ornithobacterium hominis | 1,866 | 900 | 53 | ||
Elizabethkingia | ||||||
eao | Elizabethkingia anophelis NUHP1 | 4,076 | 1,647 | 67 | 66 | |
emn | Elizabethkingia anophelis FMS-007 | 3,596 | 1,581 | 67 | 67 | |
een | Elizabethkingia anophelis JM-87 | 3,675 | 1,632 | 65 | 65 | |
elb | Elizabethkingia miricola | 3,893 | 1,649 | 71 | 68 | |
emg | Elizabethkingia meningoseptica | 3,400 | 1,546 | 64 | 64 | |
ego | Elizabethkingia ursingii | 3,725 | 1,639 | 69 | 69 | |
egm | Elizabethkingia bruuniana | 3,995 | 1,682 | 68 | 68 | |
elz | Elizabethkingia sp. 2-6 | 3,910 | 1,694 | 73 | 73 | |
elt | Elizabethkingia sp. JS20170427COW | 2,282 | 1,254 | 68 | 68 | |
eliz | Elizabethkingia sp. M8 | 3,607 | 1,539 | 64 | ||
Chryseobacterium | ||||||
chz | Chryseobacterium sp. StRB126 | 4,828 | 1,759 | 98 | 96 | |
cgn | Chryseobacterium gallinarum | 3,832 | 1,544 | 93 | 93 | |
cih | Chryseobacterium sp. IHB B 17019 | 3,642 | 1,439 | 89 | 87 | |
chh | Chryseobacterium glaciei | 4,260 | 1,596 | 99 | 98 | |
cio | Chryseobacterium indologenes | 4,441 | 1,784 | 103 | 103 | |
chry | Chryseobacterium sp. T16E-39 | 4,289 | 1,727 | 89 | 87 | |
cpip | Chryseobacterium piperi | 3,809 | 1,657 | 81 | 81 | |
chrs | Chryseobacterium sp. 3008163 | 3,793 | 1,421 | 87 | 87 | |
chrz | Chryseobacterium sp. 6424 | 2,295 | 1,150 | 54 | 54 | |
carh | Chryseobacterium arthrosphaerae | 4,743 | 1,785 | 108 | 104 | |
csha | Chryseobacterium shandongense | 3,841 | 1,533 | 83 | 82 | |
cnk | Chryseobacterium nakagawai | 4,922 | 1,828 | 112 | 111 | |
cjt | Chryseobacterium joostei | 4,353 | 1,665 | 107 | 105 | |
cil | Chryseobacterium indoltheticum | 3,786 | 1,504 | 91 | 90 | |
ccau | Chryseobacterium carnipullorum | 4,788 | 1,768 | 109 | 104 | |
cben | Chryseobacterium bernardetii | 4,686 | 1,842 | 112 | 110 | |
cgle | Chryseobacterium gleum | 5,190 | 1,927 | 109 | 103 | |
ctai | Chryseobacterium taihuense | 3,414 | 1,331 | 81 | 78 | |
clac | Chryseobacterium lactis | 4,895 | 1,863 | 104 | 104 | |
ctak | Chryseobacterium taklimakanense | 2,625 | 1,216 | 47 | 47 | |
csal | Chryseobacterium salivictor | 2,849 | 1,289 | 61 | 61 | |
cbp | Chryseobacterium balustinum | 4,380 | 1,595 | 100 | 99 | |
cnp | Chryseobacterium nepalense | 3,520 | 1,468 | 83 | 81 | |
ccao | Chryseobacterium capnotolerans | 4,252 | 1,473 | 124 | 115 | |
crhi | Chryseobacterium rhizoplanae | 4,548 | 1,662 | 123 | 116 | |
corz | Chryseobacterium oryzae | 2,855 | 1,208 | 74 | 74 | |
csup | Chryseobacterium suipulveris | 2,778 | 1,090 | 49 | 24 | |
cdae | Chryseobacterium daecheongense | 3,481 | 1,327 | 84 | 29 | |
ccab | Chryseobacterium camelliae | 3,091 | 1,235 | 86 | 30 | |
ctur | Chryseobacterium sp. C-71 | 3,775 | 1,433 | 97 | 25 | |
chrj | Chryseobacterium sp. JV274 | 4,914 | 1,727 | 130 | ||
cora | Chryseobacterium oranimense | 3,891 | 1,551 | 104 | 14 | |
cgam | Chryseobacterium gambrini | 4,025 | 1,491 | 111 | 23 | |
chra | Chryseobacterium sp. | 2,490 | 1,085 | 57 | ||
chrc | Chryseobacterium gotjawalense | 2,892 | 1,311 | 63 | ||
cflu | Chryseobacterium fluminis | 4,368 | 1,523 | 104 | ||
cmaq | Chryseobacterium manosquense | 2,667 | 1,194 | 57 | ||
ccuc | Chryseobacterium cucumeris | 4,228 | 1,687 | 80 | ||
chrd | Chryseobacterium sp. D764 | 4,345 | 1,670 | 106 | ||
Kaistella | ||||||
cjg | Kaistella jeonii | 3,024 | 1,347 | 46 | 46 | |
ccas | Kaistella carnis | 2,868 | 1,324 | 61 | 60 | |
cant | Kaistella antarctica | 2,849 | 1,288 | 52 | 52 | |
kda | Kaistella daneshvariae | 2,193 | 1,147 | 49 | 49 | |
khi | Kaistella haifensis | 2,446 | 1,152 | 57 | 57 | |
kbe | Candidatus Kaistella beijingensis | 2,547 | 1,178 | 47 | 47 | |
kfa | Kaistella flava (ex Peng et al. 2021) | 3,193 | 1,289 | 75 | 74 | |
kaq | Kaistella sp. 97-N-M2 | 2,561 | 1,094 | 54 | 54 | |
cfae | Kaistella faecalis | 2,430 | 1,158 | 46 | 45 | |
Epilithonimonas | ||||||
eva | Epilithonimonas vandammei | 3,061 | 1,359 | 61 | 61 | |
eze | Epilithonimonas zeae | 3,491 | 1,407 | 68 | 66 | |
Marnyiella | ||||||
cbau | Marnyiella aurantia | 2,353 | 1,059 | 55 | 31 | |
Cloacibacterium | ||||||
cnr | Cloacibacterium normanense | 2,454 | 1,247 | 48 | 48 | |
Empedobacter | ||||||
ebv | Empedobacter brevis | 3,290 | 1,444 | 107 | 106 | |
efal | Empedobacter falsenii | 3,361 | 1,500 | 109 | 108 | |
este | Empedobacter stercoris | 2,546 | 1,278 | 107 | 107 | |
Bergeyella | ||||||
bcad | Bergeyella cardium | 1,782 | 906 | 54 | 54 | |
bpor | Bergeyella porcorum | 2,566 | 904 | 51 | ||
Apibacter | ||||||
apib | Apibacter sp. B2966 | 1,920 | 1,035 | 52 | 52 | |
Cruoricaptor | ||||||
civ | Cruoricaptor ignavus | 1,994 | 1,039 | 48 | 48 | |
Faecalibacter | ||||||
fbo | Faecalibacter bovis | 2,576 | 1,144 | 127 | 127 | |
Karelsulcia | ||||||
smg | Candidatus Karelsulcia muelleri GWSS | 227 | 202 | 36 | 36 | |
sms | Candidatus Karelsulcia muelleri SMDSEM | 242 | 220 | 33 | 33 | |
smh | Candidatus Karelsulcia muelleri DMIN | 226 | 198 | 35 | 35 | |
sum | Candidatus Karelsulcia muelleri CARI | 246 | 221 | 34 | 34 | |
smv | Candidatus Karelsulcia muelleri Sulcia-ALF | 188 | 174 | 35 | 35 | |
smub | Candidatus Karelsulcia muelleri BGSS | 227 | 201 | 34 | 34 | |
smum | Candidatus Karelsulcia muelleri ML | 187 | 173 | 32 | 32 | |
smue | Candidatus Karelsulcia muelleri TETUND | 247 | 219 | 35 | 35 | |
smup | Candidatus Karelsulcia muelleri PSPU | 251 | 228 | 33 | 33 | |
Walczuchella | ||||||
elv | Candidatus Walczuchella monophlebidarum | 243 | 222 | 38 | 32 | |
Uzinura | ||||||
udi | Candidatus Uzinura diaspidicola | 227 | 216 | 35 | 35 | |
Shikimatogenerans | ||||||
sbos | Candidatus Shikimatogenerans bostrichidophilus | 180 | 113 | 30 | ||
Blattabacterium | ||||||
bbl | Blattabacterium sp. (Blattella germanica) Bge | 590 | 508 | 40 | 40 | |
bpi | Blattabacterium sp. BPLAN (Periplaneta americana) | 582 | 497 | 38 | 38 | |
bmm | Blattabacterium sp. (Mastotermes darwiniensis) | 544 | 462 | 40 | 40 | |
bcp | Blattabacterium Cpu (Cryptocercus punctulatus) | 548 | 465 | 38 | 38 | |
bbg | Blattabacterium sp. (Blaberus giganteus) | 577 | 492 | 37 | 37 | |
bbq | Blattabacterium sp. (Blatta orientalis) | 579 | 496 | 39 | 39 | |
blp | Blattabacterium cuenoti | 575 | 487 | 40 | 40 | |
blu | Blattabacterium sp. (Nauphoeta cinerea) | 586 | 496 | 36 | 24 | |
blck | Blattabacterium sp. (Cryptocercus kyebangensis) | 569 | 482 | 38 | 38 | |
bpun | Blattabacterium punctulatus | 547 | 463 | 37 | 37 | |
blad | Blattabacterium sp. DPU | 561 | 484 | 40 | ||
Fluviicola | ||||||
fte | Fluviicola taffensis | 4,033 | 1,420 | 49 | 45 | |
flu | Candidatus Fluviicola riflensis | 3,838 | 1,374 | 45 | 45 | |
Paracrocinitomix | ||||||
crm | Paracrocinitomix mangrovi | 3,807 | 1,169 | 66 | 39 | |
Owenweeksia | ||||||
oho | Owenweeksia hongkongensis | 3,485 | 1,377 | 45 | 44 | |
Croceimicrobium | ||||||
chyd | Croceimicrobium hydrocarbonivorans | 3,568 | 1,370 | 45 | 43 | |
Ichthyobacterium | ||||||
ise | Ichthyobacterium seriolicida | 1,474 | 722 | 35 | 31 | |
Parvicella | ||||||
ptan | Parvicella tangerina | 3,553 | 911 | 58 | 20 | |
Bostrichicola | ||||||
bus | Candidatus Bostrichicola ureolyticus | 327 | 5 | 38 | ||
Sulfidibacterium | ||||||
shyr | Candidatus Sulfidibacterium hydrothermale | 2,614 | 1,307 | 55 | 34 | |
unclassified Bacteroidetes | ||||||
bbau | Bacteroidetes bacterium | 2,598 | 1,141 | 41 | 34 | |
Chlorobiota | ||||||
Chlorobaculum | ||||||
cte | Chlorobaculum tepidum | Ref | 2,255 | 1,176 | ||
cpc | Chlorobaculum parvum | 2,043 | 1,253 | 58 | 58 | |
clz | Chlorobaculum limnaeum | 2,452 | 1,391 | 58 | 58 | |
Chlorobium | ||||||
cch | Chlorobium chlorochromatii | 2,002 | 1,152 | 45 | ||
cph | Chlorobium phaeobacteroides DSM 266 | 2,650 | 1,375 | 56 | 56 | |
cpb | Chlorobium phaeobacteroides BS1 | 2,469 | 1,330 | 55 | 55 | |
cli | Chlorobium limicola | 2,434 | 1,377 | 54 | 54 | |
pvi | Chlorobium phaeovibrioides | 1,753 | 1,168 | 51 | 51 | |
Pelodictyon | ||||||
plt | Pelodictyon luteolum | 2,083 | 1,285 | 54 | 54 | |
pph | Pelodictyon phaeoclathratiforme | 2,707 | 1,406 | 60 | 60 | |
Prosthecochloris | ||||||
paa | Prosthecochloris aestuarii | 2,327 | 1,375 | 51 | 51 | |
proc | Prosthecochloris sp. CIB 2401 | 2,200 | 1,314 | 58 | 55 | |
prs | Prosthecochloris sp. HL-130-GSB | 2,006 | 1,168 | 56 | 56 | |
pros | Prosthecochloris sp. GSB1 | 2,269 | 1,346 | 58 | 57 | |
prow | Prosthecochloris sp. SCSIO W1101 | 2,670 | 1,359 | 55 | 1 | |
proi | Prosthecochloris sp. SCSIO W1103 | 2,520 | 1,363 | 55 | 1 | |
Chloroherpeton | ||||||
cts | Chloroherpeton thalassium | 2,710 | 1,413 | 50 | 50 | |
Rhodothermota | ||||||
Rhodothermus | ||||||
rmr | Rhodothermus marinus DSM 4252 | 2,863 | 1,587 | 51 | 51 | |
rmg | Rhodothermus marinus SG0.5JP17-172 | 2,838 | 1,553 | 52 | 51 | |
Rhodocaloribacter | ||||||
rlo | Rhodocaloribacter litoris | 3,629 | 1,587 | 50 | 1 | |
unclassified Rhodothermaceae | ||||||
rbar | Rhodothermaceae bacterium RA | 3,506 | 1,626 | 50 | 50 | |
Salinibacter | ||||||
sru | Salinibacter ruber DSM 13855 | 2,833 | 1,427 | 48 | 48 | |
srm | Salinibacter ruber M8 | 3,257 | 1,446 | 45 | 44 | |
Ignavibacteriota | ||||||
Ignavibacterium | ||||||
ial | Ignavibacterium album | 3,195 | 1,490 | 48 | 48 | |
Melioribacter | ||||||
mro | Melioribacter roseus | 2,840 | 1,537 | 48 | 48 | |
Balneolota | ||||||
Cyclonatronum | ||||||
cprv | Cyclonatronum proteinivorum | 3,277 | 1,455 | 54 | 38 | |
Cloacimonadota | ||||||
Cloacimonas | ||||||
caci | Candidatus Cloacimonas acidaminovorans | 1,815 | 857 | 53 | 31 | |
Fidelibacterota | ||||||
Fidelibacter | ||||||
fml | Fidelibacter multiformis | 2,271 | 1,115 | 49 | ||
Aquificota | ||||||
Aquifex | ||||||
aae | Aquifex aeolicus | Ref | 1,553 | 1,021 | 51 | 51 |
Hydrogenobaculum | ||||||
hya | Hydrogenobaculum sp. Y04AAS1 | 1,629 | 1,041 | 54 | 53 | |
hho | Hydrogenobaculum sp. HO | 1,579 | 1,025 | 53 | 52 | |
hys | Hydrogenobaculum sp. SN | 1,575 | 1,023 | 52 | 52 | |
Hydrogenobacter | ||||||
hth | Hydrogenobacter thermophilus | Ref | 1,894 | 1,131 | 48 | 48 |
hte | Hydrogenobacter thermophilus | 1,869 | 1,140 | 49 | 48 | |
Thermocrinis | ||||||
tal | Thermocrinis albus | 1,593 | 1,101 | 49 | 49 | |
trd | Thermocrinis ruber | 1,627 | 1,062 | 47 | 47 | |
Sulfurihydrogenibium | ||||||
sul | Sulfurihydrogenibium sp. YO3AOP1 | 1,721 | 1,134 | 52 | 52 | |
saf | Sulfurihydrogenibium azorense | 1,725 | 1,093 | 43 | 43 | |
Persephonella | ||||||
pmx | Persephonella marina | 2,051 | 1,212 | 42 | 42 | |
Thermovibrio | ||||||
tam | Thermovibrio ammonificans | 1,813 | 1,078 | 58 | 58 | |
Desulfurobacterium | ||||||
dte | Desulfurobacterium thermolithotrophum | 1,509 | 1,018 | 51 | 51 | |
Thermosulfidibacterota | ||||||
Thermosulfidibacter | ||||||
ttk | Thermosulfidibacter takaii | 1,757 | 1,175 | 49 | 47 | |
Coprothermobacterota | ||||||
Coprothermobacter | ||||||
cpo | Coprothermobacter proteolyticus | 1,405 | 916 | 54 | 54 | |
Caldisericota | ||||||
Caldisericum | ||||||
cex | Caldisericum exile | 1,582 | 892 | 52 | 51 | |
Chrysiogenota | ||||||
Desulfurispirillum | ||||||
din | Desulfurispirillum indicum | 2,571 | 1,505 | 50 | 49 | |
Deferribacterota | ||||||
Deferribacter | ||||||
ddf | Deferribacter desulfuricans | 2,374 | 1,464 | 51 | 50 | |
Denitrovibrio | ||||||
dap | Denitrovibrio acetiphilus | 2,964 | 1,649 | 52 | 51 | |
Geovibrio | ||||||
gtl | Geovibrio thiophilus | 2,691 | 1,606 | 53 | 37 | |
Calditerrivibrio | ||||||
cni | Calditerrivibrio nitroreducens | 2,100 | 1,366 | 50 | 49 | |
Flexistipes | ||||||
fsi | Flexistipes sinusarabici | 2,261 | 1,427 | 53 | 52 | |
Mucispirillum | ||||||
msch | Mucispirillum schaedleri | 2,148 | 1,149 | 43 | 17 | |
Calditrichota | ||||||
Caldithrix | ||||||
caby | Caldithrix abyssi | 4,214 | 1,724 | 48 | 32 | |
Dictyoglomota | ||||||
Dictyoglomus | ||||||
dth | Dictyoglomus thermophilum | 1,912 | 1,204 | 56 | 55 | |
dtu | Dictyoglomus turgidum | 1,744 | 1,143 | 53 | 53 | |
Nitrospirota | ||||||
Thermodesulfovibrio | ||||||
tye | Thermodesulfovibrio yellowstonii | 2,033 | 1,286 | 54 | 51 | |
tob | Thermodesulfovibrio obliviosus | 1,828 | 1,138 | 53 | ||
taut | Thermodesulfovibrio autotrophicus | 1,961 | 1,202 | 53 | ||
Dissulfurispira | ||||||
dtp | Dissulfurispira thermophila | 2,392 | 1,336 | 52 | 42 | |
Nitrospira | ||||||
nde | Nitrospira defluvii | 4,268 | 1,739 | 49 | 49 | |
nmv | Nitrospira moscoviensis | 4,790 | 1,862 | 51 | 51 | |
nio | Candidatus Nitrospira inopinata | 3,373 | 1,553 | 59 | 48 | |
nja | Nitrospira japonica | 4,150 | 1,597 | 56 | 48 | |
nkf | Candidatus Nitrospira kreftii | 4,189 | 1,693 | 51 | 20 | |
nif | Nitrospira sp. KM1 | 4,318 | 1,283 | 50 | 14 | |
nti | Nitrospira tepida | 4,608 | 1,796 | 52 | 2 | |
nall | Candidatus Nitrospira allomarina | 3,850 | 1,633 | 52 | 2 | |
nneo | Candidatus Nitrospira neomarina | 4,060 | 1,685 | 52 | 2 | |
Leptospirillum | ||||||
lfc | Leptospirillum ferrooxidans | 2,421 | 1,251 | 60 | 60 | |
lfi | Leptospirillum ferriphilum ML-04 | 2,471 | 1,172 | 54 | 54 | |
lfp | Leptospirillum ferriphilum YSK | 2,260 | 1,183 | 54 | 54 | |
leg | Leptospirillum sp. Group II | 2,460 | 1,158 | 55 | 55 | |
Nitrospinota | ||||||
Nitronauta | ||||||
nli | Candidatus Nitronauta litoralis | 3,515 | 1,577 | 50 | 32 | |
Nitrospina | ||||||
nwt | Nitrospina watsonii | 2,893 | 966 | 55 | ||
Nitrohelix | ||||||
nva | Candidatus Nitrohelix vancouverensis | 3,011 | 1,417 | 52 | 1 | |
Atribacterota | ||||||
Atribacter | ||||||
alam | Atribacter laminatus | 2,759 | 1,469 | 49 | 12 | |
Thermatribacter | ||||||
tvx | Thermatribacter velox | 2,203 | 1,363 | 55 | ||
Atrimonas | ||||||
atho | Atrimonas thermophila | 2,239 | 1,346 | 61 | ||
Deltaproteobacteria | ||||||
Bradymonas | ||||||
bsed | Bradymonas sediminis | 3,699 | 1,558 | 72 | 72 | |
Persicimonas | ||||||
pcay | Persicimonas caeni | 5,810 | 2,225 | 68 | 68 | |
Microvenator | ||||||
bbae | Microvenator marinus | 4,727 | 1,770 | 56 | 56 | |
Dissulfurimicrobium | ||||||
dhr | Dissulfurimicrobium hydrothermale | 1,824 | 1,150 | 54 | 52 | |
Bacilli | ||||||
Bacillus | ||||||
bsu | Bacillus subtilis subsp. subtilis 168 | Ref | 4,174 | 2,449 | 178 | 119 |
bsr | Bacillus subtilis subsp. subtilis RO-NN-1 | 4,101 | 2,374 | 116 | 116 | |
bsl | Bacillus subtilis subsp. subtilis BSP1 | 3,847 | 2,389 | 101 | 24 | |
bsh | Bacillus subtilis subsp. subtilis 6051-HGW | 4,188 | 2,452 | 123 | 94 | |
bsy | Bacillus subtilis subsp. subtilis BAB-1 | 4,003 | 2,430 | 116 | 116 | |
bsut | Bacillus subtilis subsp. subtilis AG1839 | 4,231 | 2,452 | 116 | 116 | |
bsul | Bacillus subtilis subsp. subtilis JH642 | 4,227 | 2,451 | 116 | 116 | |
bsus | Bacillus subtilis subsp. subtilis OH 131.1 | 3,885 | 2,417 | 105 | 105 | |
bso | Bacillus subtilis subsp. natto BEST195 | 4,477 | 2,409 | 117 | 116 | |
bsn | Bacillus subtilis BSn5 | 4,145 | 2,448 | 113 | 113 | |
bsq | Bacillus subtilis QB928 | 4,034 | 2,392 | 124 | 119 | |
bsx | Bacillus subtilis XF-1 | 3,853 | 2,332 | 104 | 104 | |
bsp | Bacillus subtilis PY79 | 4,138 | 2,398 | 116 | 116 | |
bss | Bacillus subtilis subsp. spizizenii W23 | 4,063 | 2,432 | 107 | 104 | |
bst | Bacillus spizizenii TU-B-10 | 4,297 | 2,440 | 122 | 122 | |
bit | Bacillus spizizenii T30 | 3,896 | 2,377 | 102 | 102 | |
bli | Bacillus licheniformis ATCC 14580 | 4,179 | 2,470 | 93 | 93 | |
bld | Bacillus licheniformis DSM 13 = ATCC 14580 | 4,172 | 2,484 | 93 | 93 | |
blh | Bacillus paralicheniformis | 4,225 | 2,539 | 93 | 93 | |
bay | Bacillus velezensis FZB42 | 3,710 | 2,337 | 122 | 120 | |
baq | Bacillus velezensis CAU B946 | 3,823 | 2,339 | 125 | 125 | |
bya | Bacillus velezensis YAU B9601-Y2 | 3,989 | 2,385 | 121 | 121 | |
bqy | Bacillus velezensis YAU B9601-Y2 | 4,238 | 2,310 | 114 | 114 | |
bamp | Bacillus velezensis AS43.3 | 3,861 | 2,336 | 118 | 117 | |
baml | Bacillus velezensis UCMB5036 | 3,636 | 2,321 | 182 | 121 | |
bama | Bacillus velezensis UCMB5033 | 3,877 | 2,341 | 183 | 119 | |
bamn | Bacillus velezensis UCMB5113 | 3,656 | 2,322 | 182 | 120 | |
bamb | Bacillus velezensis NAU-B3 | 4,006 | 2,393 | 122 | 122 | |
bamt | Bacillus velezensis TrigoCor1448 | 3,683 | 2,350 | 102 | 102 | |
bamy | Bacillus velezensis SQR9 | 4,078 | 2,366 | 93 | 93 | |
bmp | Bacillus velezensis JS25R | 3,798 | 2,364 | 104 | 104 | |
bao | Bacillus amyloliquefaciens DSM 7 | 3,922 | 2,315 | 124 | 124 | |
baz | Bacillus amyloliquefaciens TA208 | 4,089 | 2,307 | 88 | 88 | |
bql | Bacillus amyloliquefaciens LL3 | 4,228 | 2,291 | 94 | 94 | |
bxh | Bacillus amyloliquefaciens XH7 | 4,190 | 2,284 | 96 | 96 | |
bami | Bacillus amyloliquefaciens IT-45 | 3,860 | 2,333 | 125 | 125 | |
bamc | Bacillus amyloliquefaciens CC178 | 3,950 | 2,310 | 113 | 113 | |
bamf | Bacillus amyloliquefaciens LFB112 | 3,859 | 2,310 | 125 | 125 | |
bsia | Bacillus siamensis | 4,149 | 2,340 | 118 | 116 | |
bae | Bacillus atrophaeus | 4,186 | 2,377 | 96 | 96 | |
bvm | Bacillus vallismortis | 3,678 | 2,343 | 118 | 116 | |
bson | Bacillus sonorensis | 4,968 | 2,672 | 109 | 108 | |
bht | Bacillus halotolerans | 4,038 | 2,460 | 121 | 119 | |
bmoj | Bacillus mojavensis | 3,911 | 2,413 | 117 | 117 | |
bteq | Bacillus tequilensis | 3,948 | 2,338 | 121 | 119 | |
biq | Bacillus inaquosorum | 4,066 | 2,454 | 90 | 88 | |
bstr | Bacillus stercoris | 4,550 | 2,791 | 124 | 7 | |
ban | Bacillus anthracis Ames | Ref | 5,330 | 2,436 | 132 | 129 |
bar | Bacillus anthracis Ames Ancestor | 5,486 | 2,469 | 129 | 129 | |
bat | Bacillus anthracis Sterne | 5,287 | 2,511 | 128 | 128 | |
bah | Bacillus anthracis CDC 684 | 5,896 | 2,601 | 140 | 132 | |
bai | Bacillus anthracis A0248 | 5,291 | 2,464 | 138 | 130 | |
bax | Bacillus anthracis H9401 | 5,791 | 2,595 | 126 | 126 | |
bant | Bacillus anthracis A16 | 5,530 | 2,542 | 133 | 131 | |
banr | Bacillus anthracis A16R | 5,441 | 2,523 | 133 | 131 | |
bans | Bacillus anthracis SVA11 | 5,741 | 2,572 | 126 | 126 | |
banh | Bacillus anthracis HYU01 | 5,317 | 2,527 | 127 | 127 | |
banv | Bacillus anthracis Vollum | 5,732 | 2,593 | 127 | 127 | |
bal | Bacillus cereus biovar anthracis CI | 5,558 | 2,616 | 165 | 137 | |
bce | Bacillus cereus ATCC 14579 | Ref | 5,255 | 2,456 | 142 | 142 |
bca | Bacillus cereus ATCC 10987 | 5,844 | 2,615 | 133 | 133 | |
bcz | Bacillus cereus E33L | 5,641 | 2,710 | 135 | 135 | |
bcr | Bacillus cereus AH187 | 5,783 | 2,612 | 164 | 147 | |
bcb | Bacillus cereus B4264 | 5,398 | 2,563 | 156 | 152 | |
bcu | Bacillus cereus AH820 | 5,810 | 2,658 | 138 | 133 | |
bcg | Bacillus cereus G9842 | 5,857 | 2,607 | 144 | 138 | |
bcq | Bacillus cereus Q1 | 5,502 | 2,631 | 133 | 133 | |
bcx | Bacillus cereus 03BB102 | 5,606 | 2,606 | 154 | 148 | |
bnc | Bacillus cereus NC7401 | 5,761 | 2,605 | 146 | 146 | |
bcf | Bacillus cereus F837/76 | 5,468 | 2,589 | 141 | 141 | |
bcer | Bacillus cereus FRI-35 | 5,435 | 2,616 | 145 | 145 | |
bcef | Bacillus cereus FT9 | 4,278 | 2,072 | 126 | 125 | |
bcy | Bacillus cytotoxicus | 3,844 | 2,077 | 148 | 148 | |
btk | Bacillus thuringiensis serovar konkukian 97-27 | Ref | 5,197 | 2,535 | 144 | 144 |
btl | Bacillus thuringiensis Al Hakam | 4,798 | 2,525 | 146 | 146 | |
btb | Bacillus thuringiensis BMB171 | 5,349 | 2,555 | 146 | 146 | |
btt | Bacillus thuringiensis serovar kurstaki HD73 | 6,194 | 2,675 | 140 | 140 | |
bthr | Bacillus thuringiensis serovar kurstaki YBT-1520 | 6,559 | 2,757 | 138 | 138 | |
bthi | Bacillus thuringiensis serovar kurstaki HD-1 | 6,782 | 2,820 | 138 | 138 | |
btc | Bacillus thuringiensis serovar chinensis CT-43 | 6,206 | 2,703 | 124 | 124 | |
btf | Bacillus thuringiensis serovar finitimus YBT-020 | 5,782 | 2,650 | 149 | 149 | |
btm | Bacillus thuringiensis MC28 | 6,557 | 2,711 | 121 | 121 | |
btg | Bacillus thuringiensis Bt407 | 6,402 | 2,715 | 180 | 179 | |
bti | Bacillus thuringiensis HD-771 | 6,569 | 2,704 | 135 | 134 | |
btn | Bacillus thuringiensis HD-789 | 6,462 | 2,680 | 163 | 162 | |
btht | Bacillus thuringiensis serovar thuringiensis IS5056 | 6,922 | 2,862 | 124 | 124 | |
bthu | Bacillus thuringiensis YBT-1518 | 6,738 | 2,917 | 139 | 139 | |
btw | Bacillus thuringiensis HD1011 | 6,088 | 2,640 | 146 | 146 | |
bthy | Bacillus thuringiensis YWC2-8 | 6,193 | 2,706 | 146 | 146 | |
bwe | Bacillus mycoides KBAB4 | 5,653 | 2,675 | 152 | 152 | |
bww | Bacillus mycoides WSBC 10204 | 5,687 | 2,635 | 85 | 85 | |
bmyo | Bacillus mycoides ATCC 6462 | 5,684 | 2,671 | 143 | 143 | |
bty | Bacillus toyonensis | 4,942 | 2,486 | 133 | 133 | |
bmyc | Bacillus pseudomycoides 219298 | 5,624 | 2,608 | 157 | 153 | |
bby | Bacillus bombysepticus | 5,488 | 2,676 | 134 | 134 | |
bwd | Bacillus wiedmannii | 6,592 | 2,895 | 153 | 151 | |
btro | Bacillus tropicus | 5,996 | 2,733 | 153 | 151 | |
bmob | Bacillus mobilis | 5,356 | 2,611 | 153 | 151 | |
bnt | Bacillus nitratireducens | 5,233 | 2,587 | 141 | 139 | |
bpac | Bacillus pacificus | 5,370 | 2,553 | 152 | 150 | |
bpan | Bacillus paranthracis | 5,429 | 2,598 | 148 | 146 | |
balu | Bacillus albus | 5,674 | 2,667 | 153 | 151 | |
bpu | Bacillus pumilus SAFR-032 | 3,710 | 2,216 | 98 | 96 | |
bpum | Bacillus pumilus MTCC B6033 | 3,659 | 2,259 | 106 | 106 | |
bpus | Bacillus pumilus SH-B9 | 3,779 | 2,257 | 106 | 106 | |
bif | Bacillus infantis | 5,066 | 2,517 | 112 | 112 | |
bmet | Bacillus methanolicus | 3,277 | 1,902 | 295 | 122 | |
bsm | Bacillus smithii | 3,619 | 1,852 | 127 | 127 | |
bgy | Bacillus glycinifermentans | 4,738 | 2,628 | 106 | 106 | |
bwh | Bacillus weihaiensis | 3,956 | 2,171 | 146 | 144 | |
bxi | Bacillus xiamenensis | 3,556 | 2,178 | 110 | 108 | |
balt | Bacillus altitudinis | 3,786 | 2,279 | 110 | 108 | |
baer | Bacillus aerophilus | 3,819 | 2,234 | 110 | 108 | |
bsaf | Bacillus safensis | 3,905 | 2,274 | 110 | 108 | |
bfd | Bacillus freudenreichii | 4,034 | 2,375 | 84 | 83 | |
bshi | Bacillus shivajii | 4,036 | 2,127 | 159 | 157 | |
bcab | Bacillus cabrialesii | 3,991 | 2,433 | 121 | 119 | |
bry | Bacillus rugosus | 3,967 | 2,414 | 122 | 120 | |
bjs | Bacillus sp. JS | 4,240 | 2,421 | 116 | 116 | |
baci | Bacillus sp. 1NLA3E | 4,410 | 2,510 | 124 | 123 | |
gst | Bacillus sp. X1(2014) | 2,984 | 1,952 | 159 | 158 | |
bacw | Bacillus sp. WP8 | 3,583 | 2,249 | 106 | 106 | |
bacp | Bacillus sp. Pc3 | 3,698 | 2,337 | 109 | 109 | |
bacb | Bacillus sp. BH072 | 3,785 | 2,365 | 114 | 114 | |
baco | Bacillus sp. OxB-1 | 3,584 | 2,014 | 105 | 105 | |
bacy | Bacillus sp. YP1 | 3,955 | 2,456 | 118 | 118 | |
bacl | Bacillus sp. BS34A | 4,232 | 2,458 | 212 | 121 | |
balm | Bacillus sp. LM 4-2 | 4,149 | 2,438 | 116 | 116 | |
bacs | Bacillus sp. SDLI1 | 3,867 | 2,305 | 118 | 116 | |
bacq | Bacillus sp. Y1 | 4,680 | 2,746 | 168 | 165 | |
baca | Bacillus sp. S3 | 5,164 | 2,824 | 152 | 150 | |
baqu | Bacillus aquiflavi | 3,229 | 1,480 | 113 | 112 | |
bzh | Bacillus zhangzhouensis | 3,197 | 1,982 | 110 | 2 | |
bhai | Bacillus haikouensis | 4,283 | 2,198 | 122 | 14 | |
bcao | Bacillus carboniphilus | 3,382 | 1,464 | 115 | 18 | |
bard | Bacillus arachidis | 4,974 | 2,363 | 154 | 77 | |
baei | Bacillus aerius | 3,499 | 2,038 | 110 | 22 | |
basb | Bacillus sp. SB49 | 3,769 | 2,104 | 93 | ||
bacf | Bacillus sp. FJAT-18017 | 4,637 | 2,388 | 116 | 1 | |
bafc | Bacillus sp. FCW2 | 3,992 | 2,370 | 76 | ||
bkn | Bacillus kandeliae | 3,594 | 1,940 | 149 | ||
basd | Bacillus sp. SD-4 | 5,328 | 2,569 | 114 | ||
Evansella | ||||||
bco | Evansella cellulosilytica | 4,266 | 2,204 | 117 | 114 | |
Sutcliffiella | ||||||
bhk | Sutcliffiella horikoshii | 4,169 | 2,253 | 101 | 99 | |
bcoh | Sutcliffiella cohnii | 4,702 | 2,457 | 137 | 134 | |
Niallia | ||||||
bcir | Niallia circulans | 4,694 | 2,697 | 119 | 118 | |
ntx | Niallia taxi | 4,995 | 2,653 | 164 | 6 | |
nil | Niallia sp. Man26 | 5,456 | 2,753 | 165 | 2 | |
ntgc | Niallia tiangongensis | 4,661 | 2,507 | 120 | ||
Priestia | ||||||
bmq | Priestia megaterium QM B1551 | 5,612 | 2,909 | 176 | 175 | |
bmd | Priestia megaterium DSM 319 | 5,100 | 2,788 | 148 | 148 | |
bmh | Bacillus megaterium WSH-002 | 5,274 | 2,630 | 149 | 149 | |
bmeg | Bacillus megaterium NBRC 15308 = ATCC 14581 | 5,817 | 2,940 | 166 | 165 | |
beo | Priestia filamentosa | 5,048 | 2,731 | 119 | 117 | |
bfx | Priestia flexa | 3,836 | 2,101 | 143 | 141 | |
parh | Priestia aryabhattai | 5,599 | 3,180 | 100 | 93 | |
pks | Priestia koreensis | 4,744 | 2,331 | 133 | 101 | |
Halalkalibacterium | ||||||
bha | Halalkalibacterium halodurans | 4,066 | 2,376 | 106 | 105 | |
Halalkalibacter | ||||||
bkw | Halalkalibacter krulwichiae | 4,535 | 2,410 | 196 | 173 | |
Shouchella | ||||||
bcl | Shouchella clausii | 4,087 | 2,481 | 95 | 95 | |
ble | Shouchella lehensis | 4,017 | 2,280 | 91 | 91 | |
shua | Shouchella hunanensis | 4,040 | 2,231 | 106 | 3 | |
Alkalicoccobacillus | ||||||
bgi | Alkalicoccobacillus gibsonii | 3,998 | 2,400 | 121 | 119 | |
Alkalihalophilus | ||||||
bpf | Alkalihalophilus pseudofirmus | 4,335 | 2,220 | 102 | 100 | |
Cytobacillus | ||||||
bon | Cytobacillus oceanisediminis | 5,594 | 2,872 | 145 | 142 | |
bko | Cytobacillus kochii | 4,427 | 2,452 | 142 | 140 | |
cgot | Cytobacillus gottheilii | 4,347 | 2,296 | 119 | 93 | |
cfir | Cytobacillus firmus | 4,786 | 2,603 | 147 | 120 | |
csoa | Cytobacillus solani | 5,246 | 2,321 | 180 | 151 | |
cspg | Cytobacillus spongiae | 4,606 | 2,360 | 147 | 5 | |
cpss | Cytobacillus pseudoceanisediminis | 4,969 | 2,222 | 150 | 7 | |
bda | Cytobacillus dafuensis | 4,406 | 2,435 | 145 | 143 | |
Litchfieldia | ||||||
csua | Litchfieldia suaedae | 4,487 | 2,178 | 160 | 126 | |
Oceanobacillus | ||||||
oih | Oceanobacillus iheyensis | 3,496 | 2,109 | 92 | 92 | |
ocn | Oceanobacillus zhaokaii | 3,754 | 2,163 | 137 | 135 | |
ocb | Oceanobacillus sp. 143 | 2,264 | 920 | 137 | 135 | |
ojd | Oceanobacillus jeddahense | 4,738 | 2,113 | 96 | 5 | |
oon | Oceanobacillus oncorhynchi | 4,303 | 2,075 | 98 | 4 | |
Amphibacillus | ||||||
axl | Amphibacillus xylanus | 2,411 | 1,488 | 78 | 76 | |
Lysinibacillus | ||||||
lsp | Lysinibacillus sphaericus | 4,771 | 2,259 | 116 | 116 | |
lgy | Lysinibacillus varians | 4,506 | 2,221 | 130 | 130 | |
lfu | Lysinibacillus fusiformis | 4,461 | 2,394 | 150 | 150 | |
lys | Lysinibacillus sp. YS11 | 4,263 | 2,288 | 146 | 144 | |
lyb | Lysinibacillus sp. B2A1 | 5,057 | 2,467 | 123 | 116 | |
lyz | Lysinibacillus sp. 2017 | 3,440 | 1,900 | 172 | 136 | |
lyg | Lysinibacillus sp. SGAir0095 | 3,885 | 2,146 | 146 | 113 | |
lpak | Lysinibacillus pakistanensis | 4,717 | 2,412 | 147 | 111 | |
lagr | Lysinibacillus agricola | 4,945 | 2,219 | 130 | 86 | |
lmac | Lysinibacillus macroides | 4,457 | 2,290 | 148 | 99 | |
lyc | Lysinibacillus sp. CD3-6 | 4,589 | 2,194 | 154 | 99 | |
lcap | Lysinibacillus capsici | 4,611 | 2,272 | 157 | 102 | |
lyp | Lysinibacillus sp. PLM2 | 3,945 | 2,028 | 141 | 6 | |
liu | Lysinibacillus irui | 4,524 | 2,236 | 148 | ||
llb | Lysinibacillus louembei | 3,807 | 1,943 | 121 | 5 | |
lyq | Lysinibacillus sp. Ag94 | 4,247 | 2,127 | 79 | ||
lym | Lysinibacillus sp. MHQ-1 | 4,524 | 404 | 152 | ||
lyo | Lysinibacillus sp. OF-1 | 4,423 | 2,303 | 148 | ||
Halobacillus | ||||||
hhd | Halobacillus halophilus | 4,118 | 2,166 | 91 | 91 | |
hmn | Halobacillus mangrovi | 3,962 | 2,298 | 93 | 92 | |
hli | Halobacillus litoralis | 4,182 | 2,223 | 97 | 96 | |
hnz | Halobacillus naozhouensis | 4,168 | 2,290 | 93 | 3 | |
hsan | Halobacillus salinarum | 4,078 | 2,154 | 91 | 4 | |
hshi | Halobacillus shinanisalinarum | 4,469 | 2,351 | 100 | 3 | |
hamy | Halobacillus amylolyticus | 4,007 | 2,121 | 98 | 7 | |
Terribacillus | ||||||
tap | Terribacillus goriensis | 3,230 | 1,975 | 81 | 81 | |
taid | Terribacillus sp. DMT04 | 3,437 | 1,899 | 105 | 104 | |
Virgibacillus | ||||||
vir | Virgibacillus sp. SK37 | 3,826 | 2,055 | 76 | 75 | |
vhl | Virgibacillus halodenitrificans | 3,713 | 2,134 | 91 | 89 | |
vig | Virgibacillus sp. 6R | 4,013 | 2,366 | 88 | 86 | |
vil | Virgibacillus phasianinus | 3,788 | 2,185 | 90 | 88 | |
vne | Virgibacillus necropolis | 3,967 | 2,388 | 89 | 87 | |
vpn | Virgibacillus dokdonensis | 3,915 | 2,289 | 82 | 82 | |
vim | Virgibacillus sp. MSP4-1 | 3,180 | 1,920 | 102 | 101 | |
vpt | Virgibacillus pantothenticus | 4,154 | 2,293 | 88 | 86 | |
vnt | Virgibacillus natechei | 3,681 | 1,773 | 85 | 83 | |
vik | Virgibacillus sp. NKC19-16 | 3,618 | 1,810 | 86 | 83 | |
vss | Virgibacillus salarius | 3,815 | 1,782 | 87 | ||
Lentibacillus | ||||||
lao | Lentibacillus amyloliquefaciens | 3,587 | 1,997 | 83 | 83 | |
lex | Lentibacillus sp. CBA3610 | 3,575 | 1,587 | 87 | 85 | |
Fictibacillus | ||||||
fpn | Fictibacillus phosphorivorans | 4,145 | 2,220 | 87 | 85 | |
far | Fictibacillus arsenicus | 3,951 | 2,184 | 87 | 85 | |
fec | Fictibacillus enclensis | 5,028 | 2,588 | 104 | 9 | |
Salimicrobium | ||||||
sje | Salimicrobium jeotgali | 2,695 | 1,586 | 95 | 93 | |
sapl | Salimicrobium sp. PL1-032A | 2,506 | 1,395 | 92 | ||
Aeribacillus | ||||||
apak | Aeribacillus pallidus | 3,640 | 2,126 | 108 | 107 | |
acop | Aeribacillus composti | 3,489 | 2,125 | 107 | 20 | |
Peribacillus | ||||||
bsj | Peribacillus simplex | 4,639 | 2,631 | 127 | 127 | |
bmur | Peribacillus muralis | 4,708 | 2,647 | 91 | 89 | |
pbut | Peribacillus butanolivorans | 5,032 | 2,797 | 117 | 114 | |
pasa | Peribacillus asahii | 4,959 | 2,515 | 204 | 204 | |
ppsr | Peribacillus psychrosaccharolyticus | 4,418 | 2,484 | 135 | 93 | |
pfri | Peribacillus frigoritolerans | 5,042 | 2,757 | 131 | 91 | |
peri | Peribacillus sp. R9-11 | 5,795 | 2,915 | 127 | ||
Radiobacillus | ||||||
aqt | Radiobacillus deserti | 3,503 | 1,971 | 95 | 93 | |
rax | Radiobacillus kanasensis | 3,914 | 1,945 | 95 | 93 | |
Caldibacillus | ||||||
bthv | Caldibacillus thermoamylovorans | 3,562 | 2,077 | 104 | 100 | |
Psychrobacillus | ||||||
psyh | Psychrobacillus sp. AK 1817 | 3,874 | 2,092 | 110 | 108 | |
psyo | Psychrobacillus glaciei | 3,955 | 2,104 | 115 | 113 | |
psyb | Psychrobacillus sp. INOP01 | 4,077 | 2,130 | 109 | ||
Pradoshia | ||||||
prd | Pradoshia sp. D12 | 3,587 | 2,124 | 125 | 123 | |
Gracilibacillus | ||||||
grc | Gracilibacillus salitolerans | 4,550 | 2,690 | 87 | 82 | |
gcs | Gracilibacillus caseinilyticus | 4,110 | 2,227 | 89 | 6 | |
gsm | Gracilibacillus salinarum | 4,271 | 2,287 | 87 | 7 | |
Salicibibacter | ||||||
rue | Salicibibacter kimchii | 3,514 | 2,002 | 79 | 75 | |
sale | Salicibibacter halophilus | 3,458 | 1,995 | 79 | 78 | |
scib | Salicibibacter cibi | 3,606 | 1,999 | 80 | 56 | |
scia | Salicibibacter cibarius | 4,310 | 2,163 | 81 | 55 | |
Pontibacillus | ||||||
pof | Pontibacillus sp. HMF3514 | 3,846 | 2,088 | 101 | 100 | |
pchu | Pontibacillus chungwhensis | 4,102 | 2,088 | 101 | 2 | |
pona | Pontibacillus sp. ALD_SL1 | 4,759 | 1,686 | 107 | 3 | |
Neobacillus | ||||||
nmk | Neobacillus mesonae | 5,373 | 2,959 | 155 | 153 | |
ntm | Neobacillus thermocopriae | 2,647 | 1,703 | 114 | 113 | |
ndt | Neobacillus drentensis | 5,609 | 2,990 | 215 | 210 | |
ncm | Neobacillus cucumis | 5,932 | 3,021 | 214 | 7 | |
nnv | Neobacillus novalis | 5,345 | 2,674 | 155 | 5 | |
Metabacillus | ||||||
meku | Metabacillus elymi | 5,107 | 2,939 | 165 | 162 | |
msem | Metabacillus sediminilitoris | 5,037 | 2,860 | 185 | 183 | |
mdg | Metabacillus dongyingensis | 5,167 | 2,656 | 122 | 120 | |
mlit | Metabacillus litoralis | 4,913 | 2,409 | 215 | 211 | |
menl | Metabacillus endolithicus | 4,661 | 2,217 | 199 | 7 | |
mebz | Metabacillus sp. B2-18 | 5,090 | 2,544 | 199 | 7 | |
mrl | Metabacillus rhizosphaerae | 5,103 | 2,780 | 166 | ||
msee | Metabacillus sediminis | 4,084 | 2,129 | 120 | ||
Anaerobacillus | ||||||
aia | Anaerobacillus isosaccharinicus | 5,039 | 2,390 | 137 | 101 | |
Lederbergia | ||||||
blen | Lederbergia lenta | 4,072 | 2,397 | 114 | 90 | |
Sediminibacillus | ||||||
sedd | Sediminibacillus dalangtanensis | 3,795 | 2,237 | 101 | 99 | |
Rossellomorea | ||||||
bvq | Rossellomorea vietnamensis | 4,365 | 2,297 | 148 | 120 | |
rmf | Rossellomorea marisflavi | 4,376 | 2,250 | 143 | 116 | |
raz | Rossellomorea aquimaris | 4,392 | 2,311 | 147 | 1 | |
rod | Rossellomorea sp. DA94 | 4,589 | 2,348 | 148 | 1 | |
ross | Rossellomorea sp. y25 | 4,433 | 2,330 | 147 | ||
Heyndrickxia | ||||||
bck | Heyndrickxia coagulans 2-6 | 2,971 | 1,735 | 81 | 81 | |
bag | Heyndrickxia coagulans 36D1 | 3,290 | 1,959 | 114 | 114 | |
bcoa | Heyndrickxia coagulans DSM 1 = ATCC 7050 | 3,253 | 1,860 | 114 | 114 | |
bvj | Heyndrickxia vini | 4,041 | 2,266 | 132 | 107 | |
bou | Heyndrickxia oleronia | 4,885 | 2,616 | 186 | 153 | |
hspo | Heyndrickxia sporothermodurans | 4,063 | 2,042 | 134 | ||
Caldalkalibacillus | ||||||
cthu | Caldalkalibacillus thermarum | 3,085 | 1,778 | 116 | 89 | |
Salisediminibacterium | ||||||
bbev | Salisediminibacterium beveridgei | 3,269 | 1,953 | 89 | 89 | |
bse | Bacillus selenitireducens | 3,255 | 1,918 | 95 | 93 | |
Mangrovibacillus | ||||||
mcui | Mangrovibacillus cuniculi | 3,046 | 1,662 | 121 | 86 | |
Gottfriedia | ||||||
gaj | Gottfriedia acidiceleris | 4,151 | 2,196 | 128 | 127 | |
Paenalkalicoccus | ||||||
psua | Paenalkalicoccus suaedae | 3,895 | 1,951 | 98 | 72 | |
Salipaludibacillus | ||||||
slms | Salipaludibacillus sp. LMS25 | 4,020 | 1,784 | 101 | 72 | |
Mesobacillus | ||||||
mjo | Mesobacillus jeotgali | 4,643 | 2,186 | 111 | 110 | |
msut | Mesobacillus subterraneus | 4,450 | 1,994 | 122 | 5 | |
Fervidibacillus | ||||||
fhl | Fervidibacillus halotolerans | 2,625 | 1,566 | 89 | 2 | |
faf | Fervidibacillus albus | 2,858 | 1,663 | 99 | 8 | |
Siminovitchia | ||||||
sfor | Siminovitchia fortis | 3,585 | 2,003 | 89 | 6 | |
Ectobacillus | ||||||
ecto | Ectobacillus sp. JY-23 | 3,691 | 1,956 | 144 | 13 | |
Terrilactibacillus | ||||||
tei | Terrilactibacillus sp. S3-3 | 2,837 | 695 | 90 | 3 | |
Alkalihalobacillus | ||||||
alkl | Alkalihalobacillus sp. LMS39 | 4,571 | 2,350 | 125 | 31 | |
alkg | Alkalihalobacillus sp. AL-G | 3,995 | 2,077 | 101 | 27 | |
Pseudalkalibacillus | ||||||
phj | Pseudalkalibacillus hwajinpoensis | 4,128 | 2,135 | 121 | 6 | |
Domibacillus | ||||||
dom | Domibacillus sp. DTU_2020_1001157_1_SI_ALB_TIR_016 | 4,792 | 2,594 | 233 | 5 | |
Alkalicoccus | ||||||
ahal | Alkalicoccus halolimnae | 3,233 | 1,877 | 98 | 13 | |
Aciduricibacillus | ||||||
achp | Aciduricibacillus chroicocephali | 2,645 | 1,612 | 101 | 7 | |
Pseudobacillus | ||||||
bbad | Pseudobacillus badius | 4,198 | 2,125 | 137 | 134 | |
Geobacillus | ||||||
gka | Geobacillus kaustophilus | 3,540 | 2,065 | 114 | 114 | |
gte | Geobacillus thermoleovorans CCB_US3_UF5 | 3,887 | 2,043 | 115 | 115 | |
gtk | Geobacillus thermoleovorans KCTC 3570 | 3,298 | 2,019 | 127 | 125 | |
gtm | Geobacillus thermocatenulatus | 3,398 | 2,034 | 124 | 122 | |
gli | Geobacillus lituanicus | 3,198 | 1,927 | 122 | 120 | |
bcal | Bacillus caldolyticus | 3,287 | 1,966 | 121 | 119 | |
gtn | Geobacillus thermodenitrificans | 3,445 | 2,113 | 117 | 117 | |
gwc | Geobacillus sp. WCH70 | 3,168 | 1,916 | 121 | 121 | |
gyc | Geobacillus sp. Y412MC61 | 3,446 | 2,074 | 117 | 115 | |
gya | Geobacillus sp. Y412MC52 | 3,459 | 2,076 | 117 | 116 | |
gct | Geobacillus sp. C56-T3 | 3,315 | 2,049 | 118 | 116 | |
gmc | Geobacillus sp. Y4.1MC1 | 3,669 | 2,231 | 122 | 120 | |
ggh | Geobacillus sp. GHH01 | 3,459 | 2,099 | 118 | 118 | |
gjf | Geobacillus genomosp. 3 | 3,584 | 2,093 | 118 | 118 | |
gea | Geobacillus sp. 12AMOR1 | 3,357 | 1,926 | 118 | 118 | |
gel | Geobacillus sp. LC300 | 2,847 | 1,715 | 121 | 121 | |
gse | Geobacillus stearothermophilus | 3,304 | 1,960 | 119 | 119 | |
gsr | Geobacillus subterraneus | 3,161 | 1,991 | 120 | 118 | |
gej | Geobacillus sp. JS12 | 3,070 | 1,875 | 120 | 118 | |
gza | Geobacillus zalihae | 3,285 | 2,050 | 121 | 119 | |
Parageobacillus | ||||||
gth | Parageobacillus thermoglucosidasius C56-YS93 | 3,759 | 2,228 | 122 | 120 | |
ptl | Parageobacillus thermoglucosidasius DSM 2542 | 3,576 | 2,234 | 117 | 117 | |
ptb | Parageobacillus toebii NBRC 107807 | 3,069 | 1,906 | 122 | 120 | |
parg | Parageobacillus sp. KH3-4 | 3,812 | 2,143 | 121 | 121 | |
Saccharococcus | ||||||
pcal | Saccharococcus caldoxylosilyticus | 3,972 | 2,277 | 118 | 118 | |
Anoxybacillus | ||||||
afl | Anoxybacillus flavithermus | 2,832 | 1,761 | 105 | 104 | |
agn | Anoxybacillus gonensis | 2,769 | 1,801 | 103 | 103 | |
anm | Anoxybacillus sp. B2M1 | 3,666 | 2,136 | 123 | 123 | |
anl | Anoxybacillus sp. B7M1 | 3,743 | 2,140 | 124 | 123 | |
and | Anoxybacillus sp. PDR2 | 3,367 | 2,038 | 128 | 125 | |
aayd | Anoxybacillus ayderensis | 2,956 | 1,855 | 115 | 5 | |
Thermaerobacillus | ||||||
acai | Thermaerobacillus caldiproteolyticus | 3,564 | 2,092 | 131 | 129 | |
Anoxybacteroides | ||||||
aamy | Anoxybacteroides amylolyticum | 3,236 | 1,873 | 103 | 103 | |
Hydrogenibacillus | ||||||
hyi | Hydrogenibacillus sp. N12 | 2,385 | 1,512 | 68 | 39 | |
Sporolactobacillus | ||||||
stea | Sporolactobacillus terrae | 2,971 | 1,820 | 85 | 67 | |
Pullulanibacillus | ||||||
puk | Pullulanibacillus sp. KACC 23026 | 4,317 | 2,145 | 119 | 8 | |
Staphylococcus | ||||||
sau | Staphylococcus aureus subsp. aureus N315 (MRSA/VSSA) | Ref | 2,624 | 1,623 | 79 | 79 |
sav | Staphylococcus aureus subsp. aureus Mu50 (MRSA/VISA) | 2,733 | 1,637 | 76 | 76 | |
saw | Staphylococcus aureus subsp. aureus Mu3 (MRSA/hetero-VISA) | 2,699 | 1,624 | 77 | 77 | |
sah | Staphylococcus aureus subsp. aureus JH1 (MRSA/VSSA) | 2,780 | 1,624 | 81 | 81 | |
saj | Staphylococcus aureus subsp. aureus JH9 (MRSA/VISA) | 2,726 | 1,627 | 81 | 81 | |
sam | Staphylococcus aureus subsp. aureus MW2 (CA-MRSA) | 2,632 | 1,591 | 80 | 80 | |
sas | Staphylococcus aureus subsp. aureus MSSA476 (MSSA) | 2,598 | 1,576 | 59 | 59 | |
sar | Staphylococcus aureus subsp. aureus MRSA252 (MRSA) | 2,656 | 1,598 | 77 | 77 | |
sac | Staphylococcus aureus subsp. aureus COL (MRSA) | 2,676 | 1,566 | 73 | 73 | |
sax | Staphylococcus aureus subsp. aureus USA300_TCH1516 (CA-MRSA) | 2,689 | 1,537 | 88 | 80 | |
saa | Staphylococcus aureus subsp. aureus USA300_FPR3757 (CA-MRSA) | 2,604 | 1,612 | 70 | 70 | |
sao | Staphylococcus aureus subsp. aureus NCTC8325 | Ref | 2,767 | 1,566 | 77 | 77 |
sae | Staphylococcus aureus subsp. aureus Newman | 2,624 | 1,582 | 73 | 73 | |
sad | Staphylococcus aureus subsp. aureus ED98 | 2,689 | 1,595 | 83 | 81 | |
suu | Staphylococcus aureus subsp. aureus M013 (CA-MRSA) | 2,663 | 1,589 | 82 | 79 | |
suv | Staphylococcus aureus subsp. aureus VC40 | 2,468 | 1,569 | 77 | 77 | |
sue | Staphylococcus aureus subsp. aureus ED133 | 2,653 | 1,580 | 75 | 75 | |
suj | Staphylococcus aureus subsp. aureus JKD6159 (CA-MRSA) | 2,646 | 1,581 | 82 | 75 | |
suk | Staphylococcus aureus subsp. aureus JKD6008 (MRSA/VISA) | 2,680 | 1,614 | 98 | 98 | |
suc | Staphylococcus aureus subsp. aureus ECT-R 2 (MSSA) | 2,520 | 1,589 | 76 | 76 | |
sut | Staphylococcus aureus subsp. aureus T0131 (MRSA) | 2,711 | 1,633 | 72 | 72 | |
suq | Staphylococcus aureus subsp. aureus TCH60 | 2,700 | 1,599 | 90 | 82 | |
suz | Staphylococcus aureus subsp. aureus 11819-97 (CA-MRSA) | 2,656 | 1,604 | 75 | 75 | |
sud | Staphylococcus aureus subsp. aureus 71193 (MSSA) | 2,623 | 1,562 | 70 | 70 | |
sux | Staphylococcus aureus subsp. aureus HO 5096 0412 (MRSA) | 2,547 | 1,578 | 113 | 82 | |
suw | Staphylococcus aureus subsp. aureus TW20 (MRSA) | 2,808 | 1,655 | 108 | 80 | |
sug | Staphylococcus aureus subsp. aureus ST398 (MRSA) | 2,710 | 1,577 | 59 | 59 | |
suf | Staphylococcus aureus subsp. aureus LGA251 (MRSA) | 2,433 | 1,580 | 73 | 72 | |
saua | Staphylococcus aureus subsp. aureus 55/2053 | 2,553 | 1,576 | 64 | 64 | |
saue | Staphylococcus aureus subsp. aureus 6850 (MSSA) | 2,429 | 1,560 | 84 | 74 | |
saun | Staphylococcus aureus subsp. aureus CN1 (CA-MRSA) | 2,726 | 1,583 | 68 | 68 | |
saus | Staphylococcus aureus subsp. aureus SA40 (CA-MRSA) | 2,465 | 1,561 | 75 | 75 | |
sauu | Staphylococcus aureus subsp. aureus SA957 (CA-MRSA) | 2,549 | 1,577 | 74 | 74 | |
saug | Staphylococcus aureus subsp. aureus SA268 (CA-MRSA) | 2,656 | 1,591 | 76 | 76 | |
sauz | Staphylococcus aureus subsp. aureus Z172 (MRSA/VISA) | 2,870 | 1,672 | 76 | 76 | |
saut | Staphylococcus aureus subsp. aureus ST228/10388 (MRSA) | 1,986 | 1,385 | 73 | 72 | |
sauj | Staphylococcus aureus subsp. aureus ST228/10497 (MRSA) | 1,987 | 1,384 | 73 | 72 | |
sauk | Staphylococcus aureus subsp. aureus ST228/15532 (MRSA) | 1,986 | 1,385 | 73 | 72 | |
sauq | Staphylococcus aureus subsp. aureus ST228/16035 (MRSA) | 1,987 | 1,385 | 73 | 72 | |
sauv | Staphylococcus aureus subsp. aureus ST228/18412 (MRSA) | 1,983 | 1,381 | 69 | 68 | |
sauw | Staphylococcus aureus subsp. aureus ST228/16125 (MRSA) | 1,991 | 1,380 | 68 | 67 | |
saux | Staphylococcus aureus subsp. aureus ST228/18341 (MRSA) | 1,987 | 1,385 | 68 | 67 | |
sauy | Staphylococcus aureus subsp. aureus ST228/18583 (MRSA) | 1,981 | 1,380 | 69 | 68 | |
sauf | Staphylococcus aureus subsp. aureus FDAARGOS_5 | 2,774 | 1,583 | 75 | 74 | |
sab | Staphylococcus aureus RF122 | 2,515 | 1,557 | 73 | 73 | |
suy | Staphylococcus aureus 04-02981 (MRSA) | 2,650 | 1,610 | 81 | 81 | |
saub | Staphylococcus aureus 08BA02176 (LA-MRSA) | 2,703 | 1,573 | 74 | 74 | |
saum | Staphylococcus aureus M1 (MRSA) | 2,727 | 1,615 | 61 | 60 | |
sauc | Staphylococcus aureus CA-347 (MRSA) | 2,725 | 1,614 | 76 | 76 | |
saur | Staphylococcus aureus Bmb9393 (MRSA) | 2,692 | 1,646 | 76 | 76 | |
saui | Staphylococcus aureus USA300-ISMMS1 (MRSA) | 2,748 | 1,623 | 78 | 78 | |
saud | Staphylococcus aureus 502A | 2,500 | 1,578 | 78 | 78 | |
sams | Staphylococcus aureus MS4 | 2,595 | 1,502 | 73 | 73 | |
suh | Staphylococcus argenteus | 2,531 | 1,595 | 65 | 65 | |
ser | Staphylococcus epidermidis RP62A (MRSE) | Ref | 2,526 | 1,464 | 83 | 83 |
sep | Staphylococcus epidermidis ATCC 12228 | 2,485 | 1,470 | 76 | 76 | |
sepp | Staphylococcus epidermidis PM221 | 2,508 | 1,460 | 63 | 63 | |
seps | Staphylococcus epidermidis SEI | 2,309 | 1,444 | 78 | 78 | |
sha | Staphylococcus haemolyticus JCSC1435 | 2,694 | 1,562 | 76 | 76 | |
shh | Staphylococcus haemolyticus Sh29/312/L2 | 2,417 | 1,490 | 76 | 76 | |
ssp | Staphylococcus saprophyticus | 2,514 | 1,544 | 81 | 81 | |
sca | Staphylococcus carnosus subsp. carnosus | 2,460 | 1,565 | 76 | 76 | |
slg | Staphylococcus lugdunensis HKU09-01 | 2,490 | 1,564 | 80 | 80 | |
sln | Staphylococcus lugdunensis N920143 | 2,425 | 1,526 | 72 | 72 | |
ssd | Staphylococcus pseudintermedius HKU10-03 | 2,450 | 1,548 | 79 | 79 | |
sdt | Staphylococcus pseudintermedius ED99 | 2,356 | 1,557 | 80 | 77 | |
sdp | Staphylococcus delphini | 2,578 | 1,616 | 79 | 79 | |
swa | Staphylococcus warneri | 2,429 | 1,520 | 76 | 76 | |
spas | Staphylococcus pasteuri | 2,414 | 1,502 | 64 | 64 | |
sxy | Staphylococcus xylosus HKUOPL8 | 2,538 | 1,628 | 66 | 66 | |
sxl | Staphylococcus xylosus SMQ-121 | 2,512 | 1,644 | 79 | 79 | |
sxo | Staphylococcus xylosus C2a | 2,609 | 1,624 | 78 | 78 | |
shu | Staphylococcus hyicus | 2,278 | 1,467 | 81 | 80 | |
scap | Staphylococcus capitis subsp. capitis | 2,374 | 1,481 | 83 | 83 | |
ssch | Staphylococcus schleiferi 1360-13 | 2,115 | 1,491 | 78 | 78 | |
sscz | Staphylococcus schleiferi 2317-03 | 2,293 | 1,522 | 77 | 77 | |
sagq | Staphylococcus agnetis | 2,382 | 1,482 | 78 | 77 | |
seqo | Staphylococcus equorum | 2,681 | 1,633 | 83 | 83 | |
ssif | Staphylococcus simulans | 2,405 | 1,560 | 81 | 80 | |
scv | Staphylococcus condimenti | 2,427 | 1,546 | 80 | 79 | |
spet | Staphylococcus pettenkoferi | 2,272 | 1,419 | 81 | 80 | |
slz | Staphylococcus lutrae | 2,204 | 1,493 | 82 | 81 | |
scoh | Staphylococcus cohnii | 1,876 | 1,157 | 81 | 80 | |
sury | Staphylococcus ureilyticus | 2,525 | 1,511 | 81 | ||
snl | Staphylococcus nepalensis | 2,661 | 1,598 | 82 | 81 | |
skl | Staphylococcus kloosii | 2,523 | 1,581 | 83 | 82 | |
sfq | Staphylococcus felis | 2,241 | 1,524 | 80 | 79 | |
shom | Staphylococcus hominis | 2,126 | 1,367 | 84 | 82 | |
smus | Staphylococcus muscae | 1,950 | 1,329 | 79 | 77 | |
scar | Staphylococcus caprae | 2,516 | 1,522 | 83 | 81 | |
schr | Staphylococcus chromogenes | 2,060 | 1,291 | 83 | 82 | |
sarl | Staphylococcus arlettae | 2,550 | 1,586 | 83 | 83 | |
spic | Staphylococcus piscifermentans | 2,390 | 1,567 | 80 | 80 | |
ssh | Staphylococcus schweitzeri | 2,531 | 1,580 | 80 | 80 | |
ssim | Staphylococcus simiae | 2,378 | 1,502 | 82 | 81 | |
sdb | Staphylococcus debuckii | 2,481 | 1,592 | 82 | 81 | |
sllo | Staphylococcus lloydii | 2,452 | 1,537 | 84 | 83 | |
saul | Staphylococcus auricularis | 1,986 | 1,288 | 79 | 78 | |
ssac | Staphylococcus saccharolyticus | 1,752 | 1,164 | 80 | 78 | |
srai | Staphylococcus ratti | 2,150 | 1,376 | 82 | 81 | |
spsd | Staphylococcus shinii | 2,721 | 1,685 | 86 | 85 | |
stas | Staphylococcus taiwanensis | 2,312 | 1,389 | 48 | 47 | |
seda | Staphylococcus edaphicus | 2,514 | 1,493 | 84 | 1 | |
scaq | Staphylococcus casei | 2,693 | 1,634 | 90 | ||
sdev | Staphylococcus devriesei | 2,189 | 1,371 | 85 | 2 | |
srot | Staphylococcus roterodami | 2,408 | 1,518 | 82 | ||
stap | Staphylococcus sp. AntiMn-1 | 2,699 | 1,582 | 79 | ||
shsi | Staphylococcus hsinchuensis | 2,150 | 1,328 | 83 | ||
sgai | Staphylococcus gallinarum | 2,667 | 1,643 | 65 | ||
Mammaliicoccus | ||||||
sscu | Mammaliicoccus sciuri | 2,707 | 1,734 | 80 | 79 | |
sff | Mammaliicoccus fleurettii | 2,236 | 1,526 | 80 | 79 | |
sste | Mammaliicoccus stepanovicii | 2,368 | 1,546 | 79 | 79 | |
mlen | Mammaliicoccus lentus | 2,723 | 1,739 | 80 | 79 | |
mvt | Mammaliicoccus vitulinus | 2,412 | 1,583 | 83 | 81 | |
Macrococcus | ||||||
macr | Macrococcus sp. IME1552 | 2,378 | 1,478 | 77 | 76 | |
mary | Macrococcus armenti | 2,243 | 1,336 | 79 | 78 | |
mbru | Macrococcus brunensis | 2,148 | 1,317 | 81 | 79 | |
mepi | Macrococcus epidermidis | 2,560 | 1,439 | 77 | 76 | |
mequ | Macrococcus equipercicus | 2,239 | 1,211 | 84 | 82 | |
mboc | Macrococcus bovicus | 2,183 | 1,291 | 82 | 1 | |
mpsh | Macrococcus psychrotolerans | 2078 | 79 | |||
Macrococcoides | ||||||
mcl | Macrococcoides caseolyticum | 2,061 | 1,322 | 61 | 61 | |
mcak | Macrococcoides canis | 2,438 | 1,472 | 84 | 77 | |
mboe | Macrococcoides bohemicum | 2,358 | 1,477 | 77 | 76 | |
Salinicoccus | ||||||
shv | Salinicoccus halodurans | 2,644 | 1,635 | 74 | 74 | |
Jeotgalicoccus | ||||||
jea | Jeotgalicoccus sp. ATCC 8456 | 2,073 | 1,320 | 68 | 67 | |
Nosocomiicoccus | ||||||
namp | Nosocomiicoccus ampullae | 1,522 | 1,028 | 66 | 65 | |
nmy | Nosocomiicoccus massiliensis | 1,662 | 1,043 | 66 | 1 | |
Abyssicoccus | ||||||
sbac | Abyssicoccus albus | 1,679 | 1,107 | 70 | 69 | |
Listeria | ||||||
lmo | Listeria monocytogenes EGD-e (serotype 1/2a) | Ref | 2,867 | 1,710 | 181 | 88 |
lmn | Listeria monocytogenes 08-5578 (serotype 1/2a) | 3,088 | 1,743 | 73 | 73 | |
lmy | Listeria monocytogenes 08-5923 (serotype 1/2a) | 2,966 | 1,722 | 73 | 73 | |
lmt | Listeria monocytogenes 10403S (serotype 1/2a) | 2,814 | 1,712 | 85 | 85 | |
lmoc | Listeria monocytogenes SLCC5850 (serotype 1/2a) | 2,866 | 1,708 | 85 | 85 | |
lmoe | Listeria monocytogenes La111 (serotype 1/2a) | 3,131 | 1,569 | 85 | 85 | |
lmob | Listeria monocytogenes N53-1 (serotype 1/2a) | 3,150 | 1,577 | 85 | 85 | |
lmod | Listeria monocytogenes EGD (serotype 1/2a) | 2,848 | 1,708 | 85 | 85 | |
lmow | Listeria monocytogenes WSLC1001 (serotype 1/2a) | 2,916 | 1,705 | 86 | 86 | |
lmoq | Listeria monocytogenes 6179 (serotype 1/2a) | 3,033 | 1,733 | 89 | 2 | |
lmr | Listeria monocytogenes R479a (serotype 1/2a) | 3,060 | 1,720 | 120 | 76 | |
lmom | Listeria monocytogenes Lm60 (serotype 1/2a) | 2,904 | 1,712 | 86 | 86 | |
lmf | Listeria monocytogenes F2365 (serotype 4b) | 2,821 | 1,667 | 86 | 86 | |
lmc | Listeria monocytogenes CLIP 80459 (serotype 4b) | 2,766 | 1,690 | 85 | 85 | |
lmog | Listeria monocytogenes serotype 4b LL195 | 2,838 | 1,665 | 218 | 90 | |
lmp | Listeria monocytogenes 07PF0776 (serotype 4b) | 2,797 | 1,669 | 85 | 85 | |
lmol | Listeria monocytogenes L312 (serotype 4b) | 2,821 | 1,690 | 85 | 85 | |
lmoj | Listeria monocytogenes J1816 (serotype 4b) | 2,731 | 1,621 | 74 | 74 | |
lmoz | Listeria monocytogenes J1-220 (serotype 4b) | 2,927 | 1,704 | 89 | 88 | |
lmox | Listeria monocytogenes WSLC1042 (serotype 4b) | 2,824 | 1,687 | 86 | 86 | |
lmh | Listeria monocytogenes HCC23 (serotype 4a) | 2,974 | 1,673 | 85 | 85 | |
lmq | Listeria monocytogenes M7 (serotype 4a) | 2,977 | 1,675 | 85 | 85 | |
lml | Listeria monocytogenes L99 (serotype 4a) | 2,925 | 1,675 | 85 | 85 | |
lmg | Listeria monocytogenes FSL R2-561 | 2,910 | 1,712 | 85 | 85 | |
lms | Listeria monocytogenes Finland 1998 | 2,762 | 1,707 | 85 | 85 | |
lmj | Listeria monocytogenes J0161 | 2,955 | 1,733 | 73 | 73 | |
lmw | Listeria monocytogenes SLCC2755 (serotype 1/2b) | 2,940 | 1,724 | 85 | 85 | |
lmx | Listeria monocytogenes SLCC2372 (serotype 1/2c) | 2,990 | 1,724 | 85 | 85 | |
lmz | Listeria monocytogenes serotype 7 SLCC2482 | 2,929 | 1,718 | 85 | 85 | |
lmon | Listeria monocytogenes SLCC2376 (serotype 4c) | 2,755 | 1,672 | 85 | 85 | |
lmos | Listeria monocytogenes SLCC7179 (serotype 3a) | 2,826 | 1,704 | 85 | 85 | |
lmoo | Listeria monocytogenes SLCC2378 (serotype 4e) | 2,874 | 1,691 | 84 | 84 | |
lmoy | Listeria monocytogenes SLCC2479 (serotype 3c) | 2,935 | 1,712 | 83 | 83 | |
lmot | Listeria monocytogenes SLCC2540 (serotype 3b) | 2,907 | 1,703 | 85 | 85 | |
lmoa | Listeria monocytogenes ATCC 19117 (serotype 4d) | 2,868 | 1,689 | 85 | 85 | |
lmok | Listeria monocytogenes NE dc2014 | 2,770 | 1,679 | 86 | 86 | |
lmv | Listeria monocytogenes CFSAN006122 | 2,786 | 1,683 | 89 | 88 | |
lin | Listeria innocua (serotype 6a) | Ref | 3,043 | 1,697 | 84 | 84 |
lwe | Listeria welshimeri | 2,774 | 1,629 | 84 | 84 | |
lsg | Listeria seeligeri | 2,710 | 1,628 | 85 | 85 | |
liv | Listeria ivanovii subsp. ivanovii PAM 55 | 2,650 | 1,666 | 85 | 85 | |
lii | Listeria ivanovii subsp. ivanovii WSLC 3010 | 2,683 | 1,684 | 86 | 86 | |
liw | Listeria ivanovii WSLC3009 | 2,773 | 1,686 | 86 | 86 | |
lia | Listeria ivanovii subsp. londoniensis WSLC 30167 | 2,754 | 1,706 | 86 | 86 | |
lio | Listeria ivanovii subsp. londoniensis WSLC 30151 | 2,825 | 1,707 | 86 | 86 | |
lwi | Listeria weihenstephanensis | 3,008 | 1,674 | 90 | 90 | |
lgz | Listeria grayi | 2,647 | 1,572 | 84 | 84 | |
lmar | Listeria marthii | 2,741 | 1,600 | 89 | 88 | |
lnw | Listeria newyorkensis | 3,092 | 1,638 | 93 | ||
Brochothrix | ||||||
bths | Brochothrix thermosphacta | 2,413 | 1,482 | 118 | 117 | |
Exiguobacterium | ||||||
esi | Exiguobacterium sibiricum | 3,015 | 1,717 | 99 | 98 | |
eat | Exiguobacterium sp. AT1b | 3,020 | 1,693 | 98 | 97 | |
ean | Exiguobacterium antarcticum | 2,772 | 1,617 | 93 | 93 | |
exm | Exiguobacterium sp. MH3 | 3,203 | 1,749 | 88 | 88 | |
exu | Exiguobacterium sp. U13-1 | 3,174 | 1,785 | 100 | 99 | |
eap | Exiguobacterium alkaliphilum | 2,971 | 1,692 | 98 | 69 | |
eace | Exiguobacterium acetylicum | 3,416 | 1,828 | 101 | 73 | |
eaur | Exiguobacterium aurantiacum | 3,137 | 1,601 | 99 | 49 | |
emm | Exiguobacterium marinum | 2,761 | 1,577 | 98 | 7 | |
epf | Exiguobacterium profundum | 2,874 | 1,576 | 98 | 5 | |
exi | Exiguobacterium sp. N4-1P | 3,653 | 1,933 | 104 | ||
exh | Exiguobacterium sp. Helios | 3,107 | 1,731 | 99 | ||
Gemella | ||||||
got | Gemella sp. oral taxon 928 | 1,528 | 963 | 57 | 56 | |
gmo | Gemella morbillorum | 1,656 | 963 | 55 | 55 | |
geq | Gemella sp. ND 6198 | 1,531 | 946 | 57 | 56 | |
gsa | Gemella sanguinis | 1,604 | 986 | 57 | 56 | |
gha | Gemella haemolysans | 1,684 | 1,006 | 54 | 54 | |
Brevibacillus | ||||||
bbe | Brevibacillus brevis | 5,949 | 2,889 | 174 | 174 | |
blr | Brevibacillus laterosporus | 4,549 | 2,307 | 149 | 149 | |
bfm | Brevibacillus formosus | 5,636 | 2,823 | 182 | 180 | |
bagr | Brevibacillus agri | 4,856 | 2,651 | 174 | 146 | |
brw | Brevibacillus sp. 7WMA2 | 4,383 | 2,310 | 151 | 117 | |
bchs | Brevibacillus choshinensis | 5,797 | 3,082 | 204 | 159 | |
bcop | Brevibacillus composti | 4,165 | 2,172 | 151 | 121 | |
bpab | Brevibacillus parabrevis | 5,414 | 2,746 | 173 | 5 | |
bhui | Brevibacillus humidisoli | 4,591 | 2,381 | 118 | 6 | |
bayd | Brevibacillus aydinogluensis | 3,936 | 2,080 | 149 | 9 | |
bbor | Brevibacillus borstelensis | 5,157 | 2,505 | 164 | 7 | |
brum | Brevibacillus ruminantium | 5,285 | 2,561 | 150 | ||
breh | Brevibacillus sp. HD3.3A | 5,570 | 2,770 | 173 | ||
ased | Brevibacillus sedimenti | 3,572 | 2,015 | 140 | 138 | |
Paenibacillus | ||||||
pjd | Paenibacillus sp. JDR-2 | 6,213 | 3,322 | 126 | 125 | |
gym | Paenibacillus sp. Y412MC10 | 6,238 | 3,310 | 101 | 100 | |
ppy | Paenibacillus polymyxa E681 | 4,764 | 2,514 | 127 | 127 | |
ppm | Paenibacillus polymyxa SC2 | 5,387 | 2,729 | 202 | 201 | |
ppo | Paenibacillus polymyxa M1 | 5,364 | 2,716 | 152 | 152 | |
ppol | Paenibacillus polymyxa CR1 | 4,967 | 2,711 | 122 | 120 | |
ppq | Paenibacillus polymyxa SQR-21 | 5,024 | 2,697 | 150 | 149 | |
ppoy | Paenibacillus polymyxa Sb3-1 | 4,761 | 2,653 | 156 | 156 | |
pms | Paenibacillus mucilaginosus KNP414 | 7,804 | 3,574 | 153 | 150 | |
pmq | Paenibacillus mucilaginosus 3016 | 7,057 | 3,516 | 212 | 212 | |
pmw | Paenibacillus mucilaginosus K02 | 7,354 | 3,592 | 189 | 189 | |
pta | Paenibacillus terrae | 5,525 | 2,860 | 117 | 117 | |
plv | Paenibacillus larvae | 3,928 | 2,146 | 106 | 106 | |
psab | Paenibacillus sabinae | 4,788 | 2,666 | 108 | 108 | |
pdu | Paenibacillus durus | 4,683 | 2,495 | 112 | 111 | |
pbd | Paenibacillus borealis | 6,213 | 3,364 | 117 | 117 | |
pgm | Paenibacillus graminis | 5,584 | 2,956 | 119 | 119 | |
pod | Paenibacillus odorifer | 5,431 | 3,013 | 117 | 117 | |
paen | Paenibacillus sp. FSL P4-0081 | 6,415 | 3,365 | 116 | 116 | |
paef | Paenibacillus sp. FSL R5-0345 | 5,433 | 2,992 | 120 | 120 | |
paeq | Paenibacillus sp. FSL R5-0912 | 5,853 | 3,192 | 119 | 119 | |
pste | Paenibacillus stellifer | 4,464 | 2,429 | 121 | 121 | |
paea | Paenibacillus sp. FSL R7-0273 | 5,617 | 3,066 | 115 | 115 | |
paee | Paenibacillus sp. FSL R7-0331 | 5,444 | 2,975 | 116 | 116 | |
paeh | Paenibacillus sp. FSL H7-0357 | 6,116 | 3,213 | 113 | 113 | |
paej | Paenibacillus sp. FSL H7-0737 | 5,383 | 3,022 | 122 | 122 | |
pbj | Paenibacillus beijingensis | 4,728 | 2,746 | 118 | 118 | |
pih | Paenibacillus sp. IHBB 10380 | 4,606 | 2,363 | 125 | 125 | |
pri | Paenibacillus riograndensis | 6,705 | 3,480 | 114 | 114 | |
pson | Paenibacillus sonchi | 6,264 | 3,014 | 120 | 119 | |
ppeo | Paenibacillus peoriae | 5,131 | 2,765 | 139 | 139 | |
pnp | Paenibacillus naphthalenovorans | 5,054 | 2,798 | 129 | 128 | |
pow | Paenibacillus sp. 32O-W | 4,752 | 2,749 | 89 | 86 | |
pbv | Paenibacillus bovis | 4,593 | 2,357 | 117 | 116 | |
pxl | Paenibacillus xylanexedens | 5,946 | 3,054 | 142 | 140 | |
pyg | Paenibacillus yonginensis | 4,233 | 2,402 | 117 | 116 | |
pswu | Paenibacillus swuensis | 4,098 | 2,319 | 118 | 118 | |
pdh | Paenibacillus donghaensis | 7,274 | 3,427 | 123 | 118 | |
pib | Paenibacillus ihbetae | 5,693 | 3,016 | 105 | 104 | |
pcx | Paenibacillus crassostreae | 4,198 | 2,345 | 125 | 124 | |
pkb | Paenibacillus kribbensis | 4,839 | 2,751 | 126 | 125 | |
paih | Paenibacillus sp. IHB B 3084 | 4,622 | 2,462 | 119 | 118 | |
pvo | Paenibacillus vortex | 5,926 | 2,845 | 67 | 60 | |
plw | Paenibacillus lautus | 6,418 | 3,385 | 101 | 100 | |
plen | Paenibacillus lentus | 4,423 | 2,369 | 102 | 100 | |
ppsc | Paenibacillus psychroresistens | 6,967 | 3,410 | 103 | 71 | |
plut | Paenibacillus lutimineralis | 5,478 | 2,899 | 138 | 114 | |
palb | Paenibacillus albus | 5,746 | 3,014 | 123 | 85 | |
pchi | Paenibacillus chitinolyticus | 5,651 | 2,796 | 144 | 113 | |
pbk | Paenibacillus baekrokdamisoli | 6,411 | 3,137 | 101 | 75 | |
pprt | Paenibacillus protaetiae | 3,620 | 2,106 | 124 | 97 | |
pbac | Paenibacillus barcinonensis | 5,598 | 2,724 | 143 | 98 | |
prz | Paenibacillus rhizovicinus | 6,514 | 3,194 | 169 | 114 | |
plyc | Paenibacillus lycopersici | 5,683 | 2,989 | 135 | 99 | |
psop | Paenibacillus sophorae | 5,470 | 2,633 | 116 | 79 | |
ptri | Paenibacillus tritici | 6,450 | 3,298 | 118 | 81 | |
palo | Paenibacillus algicola | 4,186 | 2,020 | 107 | 77 | |
pcel | Paenibacillus cellulosilyticus | 6,014 | 2,801 | 156 | 106 | |
ptj | Paenibacillus tianjinensis | 5,596 | 2,766 | 121 | 85 | |
palr | Paenibacillus albicereus | 4,422 | 2,289 | 110 | 72 | |
pthi | Paenibacillus thiaminolyticus | 6,135 | 2,515 | 141 | 9 | |
pka | Paenibacillus kyungheensis | 4,460 | 2,296 | 106 | 1 | |
pui | Paenibacillus urinalis | 5,297 | 2,514 | 121 | 11 | |
pmah | Paenibacillus marchantiae | 6,059 | 2,968 | 140 | 13 | |
pamy | Paenibacillus amylolyticus | 5,459 | 2,154 | 141 | 12 | |
pdy | Paenibacillus dendritiformis | 5,849 | 2,696 | 106 | 10 | |
pmae | Paenibacillus macerans | 6,052 | 3,070 | 110 | 12 | |
pwn | Paenibacillus woosongensis | 4,684 | 2,434 | 103 | 5 | |
pspn | Paenibacillus spongiae | 6,599 | 2,934 | 108 | 6 | |
ppog | Paenibacillus polygoni | 4,467 | 2,268 | 189 | ||
paun | Paenibacillus aurantius | 5,549 | 2,670 | 115 | 1 | |
phk | Paenibacillus hunanensis | 4,500 | 2,277 | 106 | 1 | |
pnk | Paenibacillus nuruki | 4,399 | 2,267 | 108 | ||
ppab | Paenibacillus pabuli | 6,614 | 3,197 | 140 | 1 | |
pkp | Paenibacillus konkukensis | 6,842 | 3,229 | 146 | 1 | |
pglu | Paenibacillus glucanolyticus | 5,112 | 2,717 | 101 | 2 | |
phex | Paenibacillus hexagrammi | 5,474 | 2,276 | 167 | 1 | |
plzh | Paenibacillus sp. lzh-N1 | 4,656 | 2,589 | 158 | ||
pacl | Paenibacillus sp. CAA11 | 4,330 | 2,270 | 145 | 1 | |
pezz | Paenibacillus sp. E222 | 6,436 | 3,143 | 139 | ||
paub | Paenibacillus sp. URB8-2 | 5,133 | 2,648 | 118 | ||
Thermobacillus | ||||||
tco | Thermobacillus composti | 3,858 | 2,181 | 101 | 76 | |
Aneurinibacillus | ||||||
anx | Aneurinibacillus sp. XH2 | 3,441 | 1,938 | 153 | 150 | |
asoc | Aneurinibacillus soli | 3,978 | 2,029 | 220 | 176 | |
athe | Aneurinibacillus thermoaerophilus | 3,604 | 1,969 | 154 | 120 | |
aud | Aneurinibacillus uraniidurans | 3,638 | 1,976 | 192 | 4 | |
aneu | Aneurinibacillus sp. Ricciae_BoGa-3 | 5,472 | 2,387 | 273 | 13 | |
Cohnella | ||||||
coh | Cohnella candidum | 4,699 | 2,587 | 91 | 76 | |
cohn | Cohnella abietis | 6,203 | 3,025 | 108 | 83 | |
cchl | Cohnella cholangitidis | 5,481 | 2,757 | 95 | 67 | |
cheb | Cohnella herbarum | 6,926 | 2,740 | 93 | 68 | |
cohl | Cohnella sp. LGH | 7,169 | 3,433 | 96 | ||
Saccharibacillus | ||||||
saca | Saccharibacillus brassicae | 4,543 | 2,361 | 104 | 81 | |
Pristimantibacillus | ||||||
plig | Candidatus Pristimantibacillus lignocellulolyticus | 4,478 | 2,349 | 117 | ||
Alicyclobacillus | ||||||
aac | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 | 3,084 | 1,669 | 85 | 84 | |
aad | Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 | 3,208 | 1,684 | 81 | 81 | |
afx | Alicyclobacillus mengziensis | 4,788 | 2,359 | 102 | 72 | |
aaco | Alicyclobacillus acidoterrestris | 4,004 | 1,912 | 175 | 134 | |
acur | Alicyclobacillus curvatus | 5,372 | 2,469 | 101 | 74 | |
adau | Alicyclobacillus dauci | 4,601 | 1,566 | 146 | 15 | |
afas | Alicyclobacillus fastidiosus | 5,448 | 1,802 | 184 | 16 | |
acyc | Alicyclobacillus cycloheptanicus | 3,302 | 1,710 | 90 | 8 | |
alic | Alicyclobacillus sp. SO9 | 4,856 | 2,235 | 102 | 3 | |
Kyrpidia | ||||||
bts | Kyrpidia tusciae | 3,150 | 1,845 | 79 | 78 | |
kyr | Kyrpidia spormannii | 3,087 | 1,888 | 77 | 67 | |
Tumebacillus | ||||||
tum | Tumebacillus avium | 4,379 | 2,044 | 335 | 224 | |
tab | Tumebacillus algifaecis | 3,774 | 1,828 | 270 | 188 | |
Effusibacillus | ||||||
eff | Effusibacillus dendaii | 3,599 | 2,001 | 114 | 74 | |
Fodinisporobacter | ||||||
ffe | Fodinisporobacter ferrooxydans | 4,378 | 2,316 | 154 | ||
Solibacillus | ||||||
siv | Solibacillus silvestris StLB046 | 3,823 | 2,058 | 133 | 133 | |
ssil | Solibacillus silvestris DSM 12223 | 3,754 | 2,110 | 157 | 155 | |
sob | Solibacillus sp. R5-41 | 3,957 | 2,044 | 146 | 143 | |
Planococcus | ||||||
pln | Planococcus sp. PAMC 21323 | 3,089 | 1,823 | 84 | 84 | |
pku | Planococcus kocurii | 3,234 | 1,907 | 102 | 101 | |
prt | Planococcus rifietoensis | 3,386 | 1,927 | 103 | 102 | |
pll | Planococcus versutus | 3,145 | 1,855 | 102 | 101 | |
pana | Planococcus antarcticus | 3,492 | 1,983 | 103 | 102 | |
pdg | Planococcus donghaensis | 3,099 | 1,855 | 117 | 116 | |
phc | Planococcus halocryophilus | 3,211 | 1,902 | 106 | 105 | |
pmar | Planococcus sp. Y42 | 3,955 | 2,088 | 100 | 99 | |
ppla | Planococcus plakortidis | 3,055 | 1,808 | 101 | 79 | |
pfae | Planococcus faecalis | 3,330 | 1,921 | 102 | 80 | |
plx | Planococcus sp. MB-3u-03 | 3,122 | 1,681 | 102 | 73 | |
pmat | Planococcus maritimus | 3,106 | 1,808 | 102 | 73 | |
pdec | Planococcus dechangensis | 3,195 | 1,837 | 102 | 68 | |
pgq | Planococcus glaciei | 2,522 | 1,161 | 104 | 76 | |
play | Planococcus halotolerans | 3,377 | 1,900 | 103 | 77 | |
pliq | Planococcus liqunii | 3,776 | 2,080 | 105 | ||
pshe | Planococcus shenhongbingii | 3,726 | 2,050 | 103 | ||
pshx | Planococcus shixiaomingii | 3,791 | 2,037 | 104 | ||
Jeotgalibacillus | ||||||
jeo | Jeotgalibacillus malaysiensis | 4,444 | 2,075 | 146 | 141 | |
Kurthia | ||||||
kur | Kurthia sp. 11kri321 | 2,893 | 1,688 | 109 | 109 | |
kzo | Kurthia zopfii | 2,941 | 1,773 | 105 | 88 | |
Sporosarcina | ||||||
spsy | Sporosarcina psychrophila | 4,223 | 2,331 | 105 | 103 | |
spor | Sporosarcina sp. P33 | 3,014 | 1,852 | 97 | 80 | |
spop | Sporosarcina sp. P37 | 3,210 | 1,844 | 97 | 82 | |
sure | Sporosarcina ureae | 3,155 | 1,904 | 100 | 79 | |
spos | Sporosarcina sp. PTS2304 | 3,201 | 1,852 | 99 | 78 | |
spae | Sporosarcina pasteurii | 2,998 | 1,899 | 102 | 76 | |
spoo | Sporosarcina sp. Te-1 | 4,151 | 2,101 | 102 | 71 | |
surl | Sporosarcina ureilytica | 3,118 | 1,767 | 103 | 1 | |
stho | Sporosarcina thermotolerans | 3,196 | 1,257 | 105 | 1 | |
strb | Sporosarcina trichiuri | 2,996 | 1,678 | 96 | ||
sow | Sporosarcina oncorhynchi | 3,321 | 1,811 | 96 | ||
sjt | Sporosarcina jeotgali | 3,107 | 1,722 | 101 | ||
spoh | Sporosarcina sp. ANT_H38 | 4498 | 161 | |||
Rummeliibacillus | ||||||
rst | Rummeliibacillus stabekisii | 3,244 | 1,732 | 143 | 140 | |
Paenisporosarcina | ||||||
paek | Paenisporosarcina cavernae | 2,507 | 1,453 | 128 | 103 | |
panc | Paenisporosarcina antarctica | 3,573 | 2,103 | 97 | 77 | |
Viridibacillus | ||||||
vij | Viridibacillus sp. JNUCC-6 | 4,287 | 2,322 | 110 | 78 | |
Ureibacillus | ||||||
uth | Ureibacillus thermophilus | 2,799 | 1,658 | 83 | 1 | |
Novibacillus | ||||||
ntr | Novibacillus thermophilus | 3,231 | 1,945 | 67 | 58 | |
Laceyella | ||||||
lfb | Laceyella sacchari | 3,145 | 1,722 | 135 | 108 | |
Thermoactinomyces | ||||||
tvu | Thermoactinomyces vulgaris | 2,498 | 1,531 | 97 | 80 | |
Kroppenstedtia | ||||||
kpul | Kroppenstedtia pulmonis | 3,096 | 1,781 | 79 | 60 | |
keb | Kroppenstedtia eburnea | 3,323 | 1,896 | 80 | 61 | |
Polycladomyces | ||||||
pabs | Polycladomyces abyssicola | 3,200 | 1,818 | 71 | 53 | |
Lactococcus | ||||||
lla | Lactococcus lactis subsp. lactis Il1403 | Ref | 2,266 | 1,292 | ||
llk | Lactococcus lactis subsp. lactis KF147 | 2,473 | 1,391 | 87 | 85 | |
llt | Lactococcus lactis subsp. lactis CV56 | 2,408 | 1,288 | 81 | 81 | |
lls | Lactococcus lactis subsp. lactis IO-1 | 2,233 | 1,308 | 86 | 85 | |
lld | Lactococcus lactis subsp. lactis KLDS 4.0325 | 2,596 | 1,314 | 87 | 83 | |
llx | Lactococcus lactis subsp. lactis NCDO 2118 | 2,378 | 1,366 | 85 | 85 | |
llj | Lactococcus lactis AI06 | 2,197 | 1,319 | 80 | 80 | |
llm | Lactococcus lactis subsp. cremoris MG1363 | Ref | 2,433 | 1,318 | 69 | 69 |
llc | Lactococcus lactis subsp. cremoris SK11 | 2,504 | 1,335 | 83 | 81 | |
llr | Lactococcus lactis subsp. cremoris A76 | 2,769 | 1,455 | 76 | 76 | |
lln | Lactococcus lactis subsp. cremoris NZ9000 | 2,510 | 1,358 | 84 | 82 | |
lli | Lactococcus lactis subsp. cremoris UC509.9 | 2,109 | 1,285 | 79 | 79 | |
llw | Lactococcus cremoris subsp. cremoris KW2 | 2,268 | 1,300 | 80 | 79 | |
lgr | Lactococcus garvieae ATCC 49156 | 1,947 | 1,126 | 77 | 77 | |
lgv | Lactococcus garvieae Lg2 | 1,968 | 1,130 | 77 | 77 | |
lpk | Lactococcus piscium | 2,403 | 1,416 | 81 | 70 | |
lrn | Lactococcus raffinolactis | 2,123 | 1,263 | 71 | 71 | |
lact | Lactococcus allomyrinae | 2,445 | 1,295 | 89 | 84 | |
lack | Lactococcus protaetiae | 2,147 | 1,115 | 86 | 83 | |
lti | Lactococcus taiwanensis | 1,851 | 1,138 | 84 | 83 | |
lcar | Lactococcus carnosus | 1,969 | 1,246 | 72 | 71 | |
lpaa | Lactococcus paracarnosus | 2,108 | 1,274 | 77 | 76 | |
lpet | Lactococcus petauri | 1,966 | 1,119 | 61 | 61 | |
lfo | Lactococcus formosensis | 2,312 | 1,154 | 78 | 77 | |
lacn | Lactococcus sp. NH2-7C | 2,519 | 1,321 | 86 | ||
Streptococcus | ||||||
spy | Streptococcus pyogenes M1 GAS (serotype M1) | Ref | 1,693 | 1,090 | 73 | 73 |
spz | Streptococcus pyogenes MGAS5005 (serotype M1) | 1,841 | 1,121 | 85 | 85 | |
spym | Streptococcus pyogenes M1 476 (serotype M1) | 1,562 | 1,059 | 73 | 73 | |
spya | Streptococcus pyogenes A20 (serotype M1) | 1,828 | 1,121 | 85 | 85 | |
spm | Streptococcus pyogenes MGAS8232 (serotype M18) | 1,845 | 1,107 | 12 | 12 | |
spg | Streptococcus pyogenes MGAS315 (serotype M3) | 1,865 | 1,105 | 80 | 80 | |
sps | Streptococcus pyogenes SSI-1 (serotype M3) | 1,861 | 1,091 | 67 | 67 | |
sph | Streptococcus pyogenes MGAS10270 (serotype M2) | 1,987 | 1,134 | 81 | 78 | |
spi | Streptococcus pyogenes MGAS10750 (serotype M4) | 1,979 | 1,152 | 81 | 78 | |
spj | Streptococcus pyogenes MGAS2096 (serotype M12) | 1,898 | 1,136 | 81 | 78 | |
spk | Streptococcus pyogenes MGAS9429 (serotype M12) | 1,877 | 1,114 | 85 | 82 | |
spf | Streptococcus pyogenes Manfredo (serotype M5) | 1,744 | 1,088 | 85 | 85 | |
spa | Streptococcus pyogenes MGAS10394 (serotype M6) | 1,886 | 1,108 | 85 | 85 | |
spb | Streptococcus pyogenes MGAS6180 (serotype M28) | 1,882 | 1,120 | 86 | 86 | |
stg | Streptococcus pyogenes MGAS15252 (serotype M59) | 1,662 | 1,087 | 74 | 73 | |
stx | Streptococcus pyogenes MGAS1882 (serotype M59) | 1,691 | 1,089 | 74 | 73 | |
soz | Streptococcus pyogenes NZ131 (serotype M49) | 1,700 | 1,108 | 85 | 85 | |
stz | Streptococcus pyogenes Alab49 (serotype M53) | 1,773 | 1,097 | 85 | 85 | |
spyh | Streptococcus pyogenes HSC5 (serotype M14) | 1,744 | 1,081 | 85 | 85 | |
spyo | Streptococcus pyogenes STAB901 (serotype M44) | 1,358 | 864 | 86 | 86 | |
spn | Streptococcus pneumoniae TIGR4 (virulent serotype 4) | Ref | 2,125 | 1,228 | 58 | 58 |
spd | Streptococcus pneumoniae D39 (virulent serotype 2) | 1,911 | 1,203 | 73 | 73 | |
spr | Streptococcus pneumoniae R6 (avirulent serotype 2) | Ref | 2,043 | 1,209 | 73 | 73 |
spw | Streptococcus pneumoniae CGSP14 (serotype 14) | 2,206 | 1,254 | 70 | 70 | |
sjj | Streptococcus pneumoniae JJA (serotype 14) | 2,123 | 1,220 | 70 | 70 | |
snv | Streptococcus pneumoniae INV200 (serotype 14) | 1,929 | 1,208 | |||
spx | Streptococcus pneumoniae G54 (serotype 19F) | 2,115 | 1,233 | 71 | 71 | |
snt | Streptococcus pneumoniae Taiwan19F-14 (serotype 19F) | 2,044 | 1,204 | 77 | 73 | |
snd | Streptococcus pneumoniae ST556 (serotype 19F) | 2,170 | 1,224 | 71 | 71 | |
spnn | Streptococcus pneumoniae A026 (serotype 19F) | 1,911 | 1,183 | 71 | 71 | |
sne | Streptococcus pneumoniae ATCC 700669 (serotype 23F ST81 lineage) | 1,991 | 1,245 | 70 | 70 | |
spv | Streptococcus pneumoniae Hungary19A 6 (serotype 19A) | 2,155 | 1,247 | 70 | 67 | |
snc | Streptococcus pneumoniae TCH8431/19A (serotype 19A) | 2,275 | 1,231 | 80 | 73 | |
snm | Streptococcus pneumoniae 70585 (serotype 5) | 2,202 | 1,253 | 77 | 73 | |
spp | Streptococcus pneumoniae P1031 (serotype 1) | 2,073 | 1,204 | 77 | 73 | |
sni | Streptococcus pneumoniae INV104 (serotype 1) | 1,824 | 1,219 | |||
spng | Streptococcus pneumoniae gamPNI0373 (virulent serotype 1) | 2,119 | 1,230 | 75 | 72 | |
snb | Streptococcus pneumoniae 670-6B (serotype 6B) | 2,352 | 1,265 | |||
snp | Streptococcus pneumoniae AP200 (serotype 11A) | 2,216 | 1,260 | 68 | 67 | |
snx | Streptococcus pneumoniae OXC141 (serotype 3) | 1,832 | 1,190 | 101 | 74 | |
snu | Streptococcus pneumoniae SPNA45 (serotype 3) | 1,926 | 1,171 | 76 | 68 | |
spne | Streptococcus pneumoniae SPN034156 (serotype 3) | 1,799 | 1,190 | 70 | 70 | |
spnu | Streptococcus pneumoniae SPN034183 (serotype 3) | 1,819 | 1,180 | 70 | 70 | |
spnm | Streptococcus pneumoniae SPN994038 (serotype 3) | 1,819 | 1,185 | 70 | 70 | |
spno | Streptococcus pneumoniae SPN994039 (serotype 3) | 1,819 | 1,185 | 70 | 70 | |
sag | Streptococcus agalactiae 2603 (serotype V) | 2,124 | 1,245 | 96 | 96 | |
san | Streptococcus agalactiae NEM316 (serotype III) | 2,094 | 1,249 | 101 | 101 | |
sak | Streptococcus agalactiae A909 (serotype Ia) | 1,996 | 1,242 | 102 | 102 | |
sgc | Streptococcus agalactiae GD201008-001 (serotype Ia) | 1,964 | 1,239 | 98 | 98 | |
sags | Streptococcus agalactiae SA20 | 1,679 | 1,127 | 81 | 81 | |
sagl | Streptococcus agalactiae 2-22 (serotype Ib) | 1,548 | 1,090 | 88 | 88 | |
sagm | Streptococcus agalactiae 09mas018883 | 2,089 | 1,261 | 101 | 101 | |
sagi | Streptococcus agalactiae ILRI005 | 2,155 | 1,313 | 101 | 101 | |
sagr | Streptococcus agalactiae ILRI112 | 2,073 | 1,293 | 100 | 100 | |
sagp | Streptococcus agalactiae 138P | 1,593 | 1,118 | 86 | 86 | |
sagc | Streptococcus agalactiae 138spar | 1,590 | 1,114 | 84 | 84 | |
sagt | Streptococcus agalactiae COH1 | 2,003 | 1,268 | 100 | 100 | |
sage | Streptococcus agalactiae NGBS061 | 2,102 | 1,253 | 104 | 104 | |
sagg | Streptococcus agalactiae NGBS572 | 1,923 | 1,269 | 103 | 103 | |
sagn | Streptococcus agalactiae CNCTC 10/84 | 1,944 | 1,227 | 101 | 101 | |
sagj | Streptococcus agalactiae CJB111 | 1,955 | 1,220 | 104 | 104 | |
smu | Streptococcus mutans UA159 (serotype c) | Ref | 1,962 | 1,168 | 80 | 80 |
smc | Streptococcus mutans NN2025 (serotype c) | 1,895 | 1,173 | 80 | 80 | |
smut | Streptococcus mutans GS-5 (serotype c) | 1,878 | 1,165 | 80 | 80 | |
smj | Streptococcus mutans LJ23 (serotype k) | 1,921 | 1,187 | 84 | 83 | |
smua | Streptococcus mutans UA159-FR | 1,865 | 1,171 | 79 | 79 | |
stc | Streptococcus thermophilus CNRZ1066 | 1,915 | 1,175 | |||
stl | Streptococcus thermophilus LMG 18311 | 1,889 | 1,165 | |||
ste | Streptococcus thermophilus LMD-9 | 1,716 | 1,085 | 87 | 87 | |
stn | Streptococcus thermophilus ND03 | 1,919 | 1,127 | 71 | 71 | |
stu | Streptococcus thermophilus JIM 8232 | 2,145 | 1,158 | 85 | 85 | |
stw | Streptococcus thermophilus MN-ZLW-002 | 1,910 | 1,132 | 72 | 72 | |
sthe | Streptococcus thermophilus ASCC 1275 | 1,700 | 1,075 | 71 | 71 | |
sths | Streptococcus thermophilus S9 | 1,689 | 1,071 | 89 | 88 | |
ssa | Streptococcus sanguinis | 2,270 | 1,331 | 74 | 74 | |
ssb | Streptococcus suis BM407 (serotype 2) | 1,947 | 1,230 | 81 | 71 | |
ssu | Streptococcus suis 05ZYH33 (serotype 2) | 2,186 | 1,233 | 68 | 68 | |
ssv | Streptococcus suis 98HAH33 (serotype 2) | 2,189 | 1,242 | 68 | 68 | |
ssi | Streptococcus suis P1/7 (serotype 2) | 1,825 | 1,190 | 68 | 68 | |
sss | Streptococcus suis SC84 (serotype 2) | 1,898 | 1,211 | 81 | 71 | |
ssf | Streptococcus suis A7 (serotype 2) | 1,974 | 1,212 | 68 | 68 | |
ssw | Streptococcus suis GZ1 (serotype 2) | 1,978 | 1,215 | 61 | 61 | |
sup | Streptococcus suis S735 (serotype 2) | 1,882 | 1,203 | 68 | 68 | |
ssus | Streptococcus suis SC070731 (serotype 2) | 1,933 | 1,244 | 69 | 69 | |
sst | Streptococcus suis ST3 (serotype 3) | 1,952 | 1,200 | 66 | 66 | |
ssuy | Streptococcus suis YB51 (serotype 3) | 2,012 | 1,224 | 68 | 68 | |
ssk | Streptococcus suis D12 (serotype 9) | 2,078 | 1,200 | 68 | 68 | |
ssq | Streptococcus suis D9 (serotype 7) | 2,074 | 1,235 | 66 | 66 | |
sui | Streptococcus suis JS14 (serotype 14) | 2,066 | 1,238 | 74 | 74 | |
suo | Streptococcus suis SS12 (serotype 1/2) | 2,079 | 1,226 | 71 | 71 | |
srp | Streptococcus suis ST1 (serotype 1) | 1,987 | 1,207 | 70 | 70 | |
ssut | Streptococcus suis TL13 (serotype 16) | 1,939 | 1,183 | 68 | 68 | |
ssui | Streptococcus suis T15 | 2,190 | 1,269 | 68 | 68 | |
sgo | Streptococcus gordonii | 2,051 | 1,239 | 73 | 72 | |
sez | Streptococcus equi subsp. zooepidemicus MGCS10565 | 1,893 | 1,146 | 73 | 73 | |
seq | Streptococcus equi subsp. zooepidemicus H70 | 1,869 | 1,174 | 92 | 74 | |
sezo | Streptococcus equi subsp. zooepidemicus ATCC 35246 | 2,087 | 1,171 | 72 | 72 | |
sequ | Streptococcus equi subsp. zooepidemicus CY | 1,999 | 1,147 | 66 | 66 | |
seu | Streptococcus equi subsp. equi 4047 | 1,997 | 1,204 | 94 | 87 | |
sub | Streptococcus uberis | 1,762 | 1,175 | 74 | 74 | |
sds | Streptococcus dysgalactiae subsp. equisimilis GGS_124 | 2,097 | 1,277 | 72 | 72 | |
sdg | Streptococcus dysgalactiae subsp. equisimilis ATCC 12394 | 2,056 | 1,244 | 72 | 72 | |
sda | Streptococcus dysgalactiae subsp. equisimilis RE378 | 1,878 | 1,234 | 71 | 71 | |
sdc | Streptococcus dysgalactiae subsp. equisimilis AC-2713 | 2,215 | 1,307 | 72 | 72 | |
sdq | Streptococcus dysgalactiae subsp. equisimilis 167 | 2,223 | 1,270 | 71 | 71 | |
sga | Streptococcus gallolyticus UCN34 | 2,224 | 1,353 | 89 | 89 | |
sgg | Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069 | 2,329 | 1,356 | 101 | 101 | |
sgt | Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 | 2,246 | 1,343 | 76 | 76 | |
smb | Streptococcus mitis | 2,006 | 1,225 | 91 | 76 | |
sgw | Streptococcus gwangjuensis | 1,829 | 1,123 | 75 | 75 | |
stoy | Streptococcus toyakuensis | 1,964 | 1,180 | 73 | 73 | |
sor | Streptococcus oralis | 1,907 | 1,109 | 82 | 76 | |
stk | Streptococcus parauberis | 1,868 | 1,197 | 69 | 69 | |
stb | Streptococcus pasteurianus | 1,869 | 1,235 | 76 | 76 | |
scp | Streptococcus parasanguinis ATCC 15912 | 2,022 | 1,203 | 81 | 76 | |
scf | Streptococcus parasanguinis FW213 | 2,019 | 1,216 | 73 | 73 | |
ssr | Streptococcus salivarius CCHSS3 | 2,027 | 1,267 | 86 | 86 | |
stf | Streptococcus salivarius 57.I | 1,941 | 1,231 | 86 | 86 | |
stj | Streptococcus salivarius JIM8777 | 1,979 | 1,208 | 86 | 86 | |
strs | Streptococcus salivarius NCTC 8618 | 1,887 | 1,173 | 87 | 87 | |
ssah | Streptococcus salivarius HSISS4 | 1,903 | 1,231 | 86 | 86 | |
std | Streptococcus pseudopneumoniae | 2,236 | 1,205 | 44 | 44 | |
smn | Streptococcus macedonicus | 2,017 | 1,241 | 88 | 88 | |
sif | Streptococcus infantarius subsp. infantarius | 1,902 | 1,151 | 86 | 86 | |
sie | Streptococcus intermedius JTH08 | 1,705 | 1,094 | 79 | 79 | |
sib | Streptococcus intermedius B196 | 1,815 | 1,132 | 72 | 72 | |
siu | Streptococcus intermedius C270 | 1,778 | 1,110 | 72 | 72 | |
sang | Streptococcus anginosus C1051 | 1,729 | 1,109 | 70 | 70 | |
sanc | Streptococcus anginosus C238 | 1,970 | 1,191 | 70 | 70 | |
sans | Streptococcus anginosus SA1 | 1,835 | 1,151 | 73 | 73 | |
scg | Streptococcus constellatus subsp. pharyngis C1050 | 1,797 | 1,091 | 71 | 71 | |
scon | Streptococcus constellatus subsp. pharyngis C232 | 1,756 | 1,081 | 71 | 71 | |
scos | Streptococcus constellatus subsp. pharyngis C818 | 1,754 | 1,080 | 71 | 71 | |
soi | Streptococcus cristatus | 2,069 | 1,138 | 62 | 62 | |
sik | Streptococcus iniae SF1 | 2,125 | 1,310 | 57 | 57 | |
siq | Streptococcus iniae ISET0901 | 1,872 | 1,265 | 58 | 58 | |
sio | Streptococcus iniae ISNO | 1,865 | 1,265 | 58 | 58 | |
siz | Streptococcus iniae YSFST01-82 | 1,897 | 1,295 | 74 | 74 | |
slu | Streptococcus lutetiensis | 1,890 | 1,146 | 77 | 77 | |
sig | Streptococcus ilei I-G2 | 1,834 | 1,135 | 70 | 70 | |
sip | Streptococcus ilei I-P16 | 1,896 | 1,196 | 95 | 95 | |
stv | Streptococcus sp. VT 162 | 1,922 | 1,120 | 36 | 36 | |
spat | Streptococcus pantholopis | 1,983 | 1,209 | 85 | 84 | |
stra | Streptococcus sp. A12 | 1,724 | 1,099 | 73 | 73 | |
strn | Streptococcus sp. NPS 308 | 1,828 | 1,090 | 75 | 75 | |
ssob | Streptococcus sobrinus | 1,905 | 1,149 | 89 | 88 | |
srq | Streptococcus ruminantium | 1,960 | 1,143 | 70 | 70 | |
seqi | Streptococcus equinus | 2,058 | 1,257 | 90 | 89 | |
ski | Streptococcus koreensis | 1,832 | 1,124 | 76 | 76 | |
spei | Streptococcus periodonticum | 1,723 | 1,098 | 74 | 74 | |
srat | Streptococcus ratti | 1,934 | 1,284 | 86 | 84 | |
splr | Streptococcus pluranimalium | 1,933 | 1,162 | 77 | 75 | |
strg | Streptococcus troglodytae | 2,082 | 1,216 | 80 | 80 | |
svb | Streptococcus vestibularis | 1,851 | 1,165 | 87 | 87 | |
smen | Streptococcus merionis | 2,147 | 1,378 | 66 | 64 | |
sfer | Streptococcus ferus | 1,813 | 1,137 | 80 | 80 | |
scai | Streptococcus canis | 1,968 | 1,190 | 86 | 86 | |
spsu | Streptococcus pseudoporcinus | 2,000 | 1,276 | 86 | 86 | |
schj | Streptococcus chenjunshii | 2,194 | 1,257 | 87 | 85 | |
spoc | Streptococcus porcinus | 1,831 | 1,223 | 87 | 86 | |
spab | Streptococcus parasuis | 2,056 | 1,190 | 74 | 71 | |
slat | Streptococcus lactarius | 1,946 | 1,127 | 77 | 76 | |
saup | Streptococcus australis | 1,901 | 1,125 | 73 | 73 | |
surn | Streptococcus urinalis | 2,203 | 1,171 | 89 | 88 | |
saco | Streptococcus acidominimus | 2,377 | 1,271 | 75 | 73 | |
svf | Streptococcus viridans | 1,876 | 1,118 | 73 | 73 | |
sos | Streptococcus oriscaviae | 2,081 | 1,192 | 73 | 72 | |
srum | Streptococcus ruminicola | 1,923 | 1,158 | 95 | 93 | |
sacy | Streptococcus alactolyticus | 1,659 | 1,094 | 91 | 90 | |
smie | Streptococcus milleri | 1,757 | 1,097 | 72 | 72 | |
srun | Streptococcus rubneri | 1,839 | 1,102 | 76 | 32 | |
spam | Streptococcus parapneumoniae | 2,202 | 1,179 | 72 | ||
sdid | Streptococcus didelphis | 1,312 | 736 | 111 | ||
szg | Streptococcus zhangguiae | 1,851 | 1,160 | 74 | ||
sden | Streptococcus dentalis | 1,828 | 1,108 | 77 | ||
slin | Streptococcus lingualis | 1,954 | 1,161 | 77 | ||
snid | Streptococcus nidrosiense | 1,808 | 1,118 | 73 | ||
Floricoccus | ||||||
fpen | Floricoccus penangensis | 2,033 | 1,178 | 85 | 85 | |
Lactobacillus | ||||||
ljo | Lactobacillus johnsonii NCC 533 | Ref | 1,821 | 1,006 | 97 | 96 |
ljf | Lactobacillus johnsonii FI9785 | 1,735 | 987 | 70 | 70 | |
ljh | Lactobacillus johnsonii DPC 6026 | 1,772 | 1,066 | 68 | 68 | |
ljn | Lactobacillus johnsonii N6.2 | 1,698 | 1,018 | 67 | 67 | |
lac | Lactobacillus acidophilus NCFM | 1,862 | 1,058 | 74 | 74 | |
lad | Lactobacillus acidophilus La-14 | 1,874 | 1,072 | 73 | 73 | |
laf | Lactobacillus acidophilus FSI4 | 1,757 | 1,057 | 112 | 76 | |
ldb | Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 | 1,562 | 921 | 122 | 122 | |
lbu | Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | 1,721 | 952 | 127 | 127 | |
lde | Lactobacillus delbrueckii subsp. bulgaricus ND02 | 2,018 | 1,124 | 121 | 121 | |
ldl | Lactobacillus delbrueckii subsp. bulgaricus 2038 | 1,792 | 1,021 | 115 | 115 | |
lga | Lactobacillus gasseri ATCC 33323 | 1,755 | 987 | 98 | 98 | |
lhe | Lactobacillus helveticus DPC 4571 | 1,610 | 1,048 | 73 | 73 | |
lhl | Lactobacillus helveticus H10 | 1,978 | 1,145 | 74 | 74 | |
lhr | Lactobacillus helveticus R0052 | 2,011 | 1,104 | 73 | 73 | |
lhv | Lactobacillus helveticus CNRZ32 | 1,685 | 952 | 75 | 75 | |
lhh | Lactobacillus helveticus H9 | 1,695 | 1,004 | 72 | 72 | |
lhd | Lactobacillus helveticus KLDS1.8701 | 1,763 | 1,022 | 74 | 74 | |
lcr | Lactobacillus crispatus | 2,024 | 1,113 | 76 | 76 | |
lam | Lactobacillus amylovorus GRL 1112 | 2,121 | 1,079 | 72 | 72 | |
lai | Lactobacillus amylovorus 30SC | 2,059 | 1,122 | 75 | 75 | |
lay | Lactobacillus amylovorus GRL1118 | 1,920 | 1,053 | 74 | 74 | |
lke | Lactobacillus kefiranofaciens subsp. kefiranofaciens | 2,162 | 1,104 | |||
law | Lactobacillus sp. wkB8 | 1,772 | 1,063 | 69 | 69 | |
lae | Lactobacillus acetotolerans | 1,655 | 981 | 72 | 72 | |
lgl | Lactobacillus gallinarum | 1,939 | 1,112 | 79 | 79 | |
lje | Lactobacillus jensenii | 1,510 | 945 | 73 | 73 | |
lamy | Lactobacillus amylolyticus | 1,461 | 903 | 85 | 85 | |
lpw | Lactobacillus paragasseri | 1,826 | 1,030 | 91 | 90 | |
lkl | Lactobacillus kullabergensis | 1,796 | 1,126 | 71 | 71 | |
lapi | Lactobacillus apis | 1,480 | 969 | 71 | 71 | |
lhs | Lactobacillus helsingborgensis | 1,670 | 1,038 | 71 | 71 | |
lta | Lactobacillus taiwanensis | 1,771 | 1,008 | 101 | 101 | |
luu | Lactobacillus ultunensis | 2,030 | 1,181 | 79 | 78 | |
lpai | Lactobacillus panisapium | 1,974 | 1,174 | 72 | 72 | |
lid | Lactobacillus iners | 970 | 657 | 91 | 91 | |
liq | Lactobacillus intestinalis | 1,791 | 948 | 74 | 74 | |
lmul | Lactobacillus mulieris | 1,602 | 832 | 70 | 6 | |
lxo | Lactobacillus xylocopicola | 1,518 | 899 | 70 | 6 | |
lach | Lactobacillus sp. IBH004 | 1,845 | 1,066 | 70 | ||
Lacticaseibacillus | ||||||
lca | Lacticaseibacillus paracasei ATCC 334 | 2,771 | 1,473 | 76 | 76 | |
lcz | Lacticaseibacillus paracasei Zhang | 2,835 | 1,520 | 74 | 74 | |
lcs | Lacticaseibacillus paracasei BD-II | 3,204 | 1,555 | 74 | 69 | |
lce | Lacticaseibacillus paracasei LC2W | 3,164 | 1,550 | 73 | 68 | |
lcw | Lacticaseibacillus paracasei W56 | 3,126 | 1,538 | 108 | 76 | |
lcl | Lacticaseibacillus paracasei LOCK919 | 3,103 | 1,569 | 75 | 74 | |
lpq | Lacticaseibacillus paracasei N1115 | 2,985 | 1,546 | 77 | 77 | |
lpi | Lacticaseibacillus paracasei subsp. paracasei 8700:2 | 2,781 | 1,506 | 74 | 74 | |
lpap | Lacticaseibacillus paracasei subsp. paracasei | 2,872 | 1,528 | 76 | 76 | |
lcb | Lacticaseibacillus paracasei BL23 | Ref | 3,044 | 1,533 | ||
lcx | Lacticaseibacillus casei 12A | 2,681 | 1,484 | 72 | 72 | |
lrh | Lacticaseibacillus rhamnosus GG | 2,944 | 1,506 | 72 | 72 | |
lrg | Lacticaseibacillus rhamnosus GG | 2,755 | 1,501 | 71 | 71 | |
lrl | Lacticaseibacillus rhamnosus Lc 705 | 2,992 | 1,554 | 76 | 74 | |
lra | Lacticaseibacillus rhamnosus ATCC 8530 | 2,887 | 1,525 | 75 | 74 | |
lro | Lacticaseibacillus rhamnosus LOCK900 | 2,827 | 1,509 | 74 | 74 | |
lrc | Lacticaseibacillus rhamnosus LOCK908 | 2,924 | 1,525 | 75 | 74 | |
lchi | Lacticaseibacillus chiayiensis | 2,553 | 1,438 | 77 | 76 | |
lze | Lacticaseibacillus zeae | 2,748 | 1,505 | 76 | 76 | |
lhn | Lacticaseibacillus huelsenbergensis | 2,756 | 1,564 | 76 | 76 | |
lpab | Lacticaseibacillus pabuli | 2,397 | 1,211 | 80 | 17 | |
lpah | Lacticaseibacillus parahuelsenbergensis | 2,752 | 1,558 | 76 | ||
lsb | Lacticaseibacillus styriensis | 2,830 | 1,582 | 79 | ||
Lactiplantibacillus | ||||||
lpl | Lactiplantibacillus plantarum WCFS1 | Ref | 3,108 | 1,598 | 88 | 86 |
lpj | Lactiplantibacillus plantarum JDM1 | 2,948 | 1,596 | 78 | 78 | |
lpt | Lactiplantibacillus plantarum ZJ316 | 3,276 | 1,598 | 76 | 74 | |
lps | Lactiplantibacillus plantarum ST-III | 3,038 | 1,589 | 79 | 78 | |
lpr | Lactiplantibacillus plantarum subsp. plantarum P-8 | 3,179 | 1,604 | 83 | 83 | |
lpz | Lactiplantibacillus plantarum 16 | 3,088 | 1,615 | 69 | 68 | |
lpb | Lactiplantibacillus plantarum B21 | 2,964 | 1,604 | 80 | 80 | |
lpx | Lactiplantibacillus paraplantarum | 2,751 | 1,536 | 68 | 68 | |
lpg | Lactiplantibacillus pentosus | 3,179 | 1,623 | 93 | 86 | |
larg | Lactiplantibacillus argentoratensis | 3,042 | 1,537 | 104 | 94 | |
lbs | Lactiplantibacillus brownii | 2,915 | 1,422 | 80 | ||
Limosilactobacillus | ||||||
lre | Limosilactobacillus reuteri subsp. reuteri DSM 20016 | 1,900 | 1,179 | 88 | 88 | |
lrf | Limosilactobacillus reuteri subsp. reuteri JCM 1112 | 1,820 | 1,177 | 81 | 81 | |
lru | Limosilactobacillus reuteri SD2112 | 2,300 | 1,325 | 125 | 91 | |
lrt | Limosilactobacillus reuteri I5007 | 2,054 | 1,195 | 87 | 87 | |
lrr | Limosilactobacillus reuteri TD1 | 1,945 | 1,149 | 87 | 87 | |
lfe | Limosilactobacillus fermentum IFO 3956 | 1,843 | 1,245 | 69 | 69 | |
lfr | Limosilactobacillus fermentum CECT 5716 | 1,051 | 775 | 74 | 74 | |
lff | Limosilactobacillus fermentum F-6 | 2,006 | 1,300 | 73 | 73 | |
lmu | Limosilactobacillus mucosae | 1,990 | 1,160 | 116 | 116 | |
lor | Limosilactobacillus oris | 2,868 | 1,768 | 119 | 119 | |
lva | Limosilactobacillus vaginalis | 1,705 | 1,053 | 80 | 79 | |
lfn | Limosilactobacillus frumenti | 1,612 | 999 | 77 | 75 | |
lpon | Limosilactobacillus pontis | 1,547 | 992 | 88 | 87 | |
lgas | Limosilactobacillus gastricus | 1,716 | 1,068 | 68 | 66 | |
lpas | Limosilactobacillus panis | 1,843 | 1,120 | 80 | 79 | |
lpor | Limosilactobacillus portuensis | 1,898 | 1,004 | 78 | 77 | |
lalo | Limosilactobacillus allomucosae | 2,070 | 1,210 | 118 | ||
Liquorilactobacillus | ||||||
lng | Liquorilactobacillus nagelii | 2,325 | 1,505 | 79 | 78 | |
lhw | Liquorilactobacillus hordei | 2,356 | 1,473 | 83 | 82 | |
lmal | Liquorilactobacillus mali | 2,341 | 1,447 | 82 | 81 | |
Fructilactobacillus | ||||||
lsn | Fructilactobacillus sanfranciscensis | 1,284 | 874 | 82 | 81 | |
lle | Fructilactobacillus lindneri | 1,343 | 871 | 85 | 85 | |
lfv | Fructilactobacillus fructivorans | 1,298 | 836 | 76 | 76 | |
fix | Fructilactobacillus ixorae | 1,335 | 846 | 81 | 81 | |
fcli | Fructilactobacillus cliffordii | 1,405 | 866 | 82 | 82 | |
fhin | Fructilactobacillus hinvesii | 1,396 | 880 | 82 | 82 | |
fmt | Fructilactobacillus myrtifloralis | 1,376 | 854 | 82 | 81 | |
fcp | Fructilactobacillus carniphilus | 1,397 | 880 | 82 | 82 | |
Lentilactobacillus | ||||||
lbh | Lentilactobacillus buchneri NRRL B-30929 | 2,392 | 1,385 | 81 | 81 | |
lbn | Lentilactobacillus buchneri subsp. silagei CD034 | 2,377 | 1,389 | 76 | 76 | |
lpar | Lentilactobacillus parabuchneri | 2,566 | 1,408 | 80 | 78 | |
lcu | Lentilactobacillus curieae | 1,930 | 1,195 | 80 | 80 | |
lkf | Lentilactobacillus kefiri | 2,256 | 1,333 | 79 | 79 | |
lhil | Lentilactobacillus hilgardii | 2,705 | 1,489 | 78 | 77 | |
llao | Lentilactobacillus laojiaonis | 1,201 | 773 | 75 | 75 | |
ltm | Lentilactobacillus terminaliae | 1,928 | 1,060 | 82 | ||
Levilactobacillus | ||||||
lbr | Levilactobacillus brevis ATCC 367 | 2,218 | 1,231 | 82 | 81 | |
lbk | Levilactobacillus brevis KB290 | 2,582 | 1,316 | |||
lko | Levilactobacillus koreensis | 2,556 | 1,406 | 79 | 79 | |
lzy | Levilactobacillus zymae | 2,424 | 1,400 | 69 | 69 | |
lsua | Levilactobacillus suantsaii | 2,362 | 1,276 | 91 | 85 | |
lna | Levilactobacillus namurensis | 2,545 | 1,267 | 89 | 46 | |
Acetilactobacillus | ||||||
lji | Acetilactobacillus jinshanensis | 1,454 | 850 | 87 | 80 | |
Ligilactobacillus | ||||||
lsl | Ligilactobacillus salivarius UCC118 | 2,014 | 1,129 | 99 | 99 | |
lsi | Ligilactobacillus salivarius CECT 5713 | 1,552 | 992 | 120 | 120 | |
lsj | Ligilactobacillus salivarius JCM1046 | 2,152 | 1,171 | 98 | 98 | |
lrm | Ligilactobacillus ruminis | 1,862 | 1,145 | 63 | 63 | |
lagl | Ligilactobacillus agilis | 2,024 | 1,214 | 117 | 116 | |
laca | Ligilactobacillus acidipiscis | 2,262 | 1,353 | 81 | 81 | |
lani | Ligilactobacillus animalis | 2,046 | 1,194 | 86 | 86 | |
lmur | Ligilactobacillus murinus | 2,095 | 1,181 | 86 | 86 | |
lsw | Ligilactobacillus saerimneri | 1,705 | 869 | 87 | 86 | |
lfd | Ligilactobacillus faecis | 2,037 | 1,123 | 87 | 87 | |
Loigolactobacillus | ||||||
lbt | Loigolactobacillus backii | 2,495 | 1,387 | 87 | 86 | |
lcy | Loigolactobacillus coryniformis subsp. torquens | 2,847 | 1,588 | 83 | 82 | |
Paucilactobacillus | ||||||
lho | Paucilactobacillus hokkaidonensis | 2,344 | 1,316 | 68 | 68 | |
lol | Paucilactobacillus oligofermentans | 1,776 | 1,080 | 71 | 71 | |
lnn | Paucilactobacillus nenjiangensis | 2,090 | 1,317 | 72 | 71 | |
Apilactobacillus | ||||||
lku | Apilactobacillus kunkeei | 1,436 | 944 | 81 | 81 | |
abom | Apilactobacillus bombintestini | 1,152 | 788 | 79 | 79 | |
aapi | Apilactobacillus apisilvae | 1,480 | 781 | 81 | 80 | |
aapn | Apilactobacillus apinorum | 1,343 | 841 | 79 | 38 | |
Secundilactobacillus | ||||||
lpd | Secundilactobacillus paracollinoides | 3,045 | 1,596 | 88 | 87 | |
lmae | Secundilactobacillus malefermentans | 1,940 | 1,210 | 83 | 82 | |
Pediococcus | ||||||
ppe | Pediococcus pentosaceus ATCC 25745 | 1,755 | 1,045 | 72 | 72 | |
ppen | Pediococcus pentosaceus SL4 | 1,709 | 1,019 | 67 | 67 | |
pce | Pediococcus claussenii | 1,881 | 1,119 | 69 | 69 | |
pdm | Pediococcus damnosus | 2,286 | 1,273 | 72 | 72 | |
paci | Pediococcus acidilactici | 1,935 | 1,199 | 78 | 77 | |
pio | Pediococcus inopinatus | 2,119 | 1,252 | 79 | 77 | |
Furfurilactobacillus | ||||||
lros | Furfurilactobacillus rossiae | 2,570 | 1,411 | 65 | 65 | |
Companilactobacillus | ||||||
lgn | Companilactobacillus ginsenosidimutans | 2,393 | 1,318 | 63 | 63 | |
lhi | Companilactobacillus heilongjiangensis | 2,337 | 1,337 | 68 | 68 | |
lct | Companilactobacillus crustorum | 2,218 | 1,238 | 67 | 59 | |
lalw | Companilactobacillus allii | 2,427 | 1,349 | 72 | 72 | |
lali | Companilactobacillus alimentarius | 2,199 | 1,287 | 70 | 70 | |
lfm | Companilactobacillus farciminis | 2,394 | 1,368 | 71 | 71 | |
lzh | Companilactobacillus zhachilii | 2,364 | 1,294 | 70 | 70 | |
lft | Companilactobacillus futsaii | 2,519 | 1,448 | 70 | 70 | |
cpab | Companilactobacillus pabuli | 2,329 | 1,323 | 70 | 70 | |
Latilactobacillus | ||||||
lsa | Latilactobacillus sakei subsp. sakei | 1,885 | 1,109 | 84 | 84 | |
lcv | Latilactobacillus curvatus | 1,711 | 1,089 | 86 | 73 | |
lgm | Latilactobacillus graminis | 1,639 | 1,040 | 85 | 85 | |
Amylolactobacillus | ||||||
lah | Amylolactobacillus amylophilus | 1,553 | 950 | 70 | 70 | |
Bombilactobacillus | ||||||
lbm | Bombilactobacillus bombi | 1,674 | 1,079 | 73 | 73 | |
bog | Bombilactobacillus thymidiniphilus | 1,441 | 773 | 73 | 72 | |
bfp | Bombilactobacillus folatiphilus | 1,527 | 832 | 73 | 68 | |
Schleiferilactobacillus | ||||||
lhb | Schleiferilactobacillus harbinensis | 3,375 | 1,618 | 91 | 86 | |
Lapidilactobacillus | ||||||
ldx | Lapidilactobacillus dextrinicus | 1,701 | 1,055 | 79 | 78 | |
Oenococcus | ||||||
ooe | Oenococcus oeni | 1,691 | 1,029 | 51 | 51 | |
oen | Oenococcus sp. UCMA 16435 | 1,894 | 1,155 | 56 | 52 | |
osi | Oenococcus sicerae | 1,612 | 1,032 | 56 | 52 | |
Leuconostoc | ||||||
lme | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | 2,005 | 1,220 | 85 | 85 | |
lmm | Leuconostoc mesenteroides subsp. mesenteroides J18 | 1,867 | 1,208 | 82 | 82 | |
lmk | Leuconostoc mesenteroides KFRI-MG | 1,820 | 1,167 | 81 | 81 | |
lci | Leuconostoc citreum | 1,820 | 1,137 | 82 | 81 | |
lki | Leuconostoc kimchii | 2,130 | 1,238 | 80 | 80 | |
lec | Leuconostoc sp. C2 | 1,855 | 1,167 | 80 | 80 | |
lcn | Leuconostoc carnosum | 1,691 | 1,094 | 78 | 78 | |
lgs | Leuconostoc gasicomitatum | 1,913 | 1,171 | 80 | 80 | |
lge | Leuconostoc gelidum JB7 | 1,796 | 1,158 | 79 | 79 | |
llf | Leuconostoc lactis | 1,646 | 1,116 | 82 | 82 | |
lgc | Leuconostoc garlicum | 1,600 | 1,083 | 83 | 83 | |
lsu | Leuconostoc suionicum | 1,907 | 1,213 | 85 | 85 | |
lpse | Leuconostoc pseudomesenteroides | 2,153 | 1,306 | 83 | 83 | |
lkn | Leuconostoc koreense | 1,762 | 1,081 | 85 | ||
Weissella | ||||||
wko | Weissella koreensis | 1,357 | 816 | 71 | 70 | |
wce | Weissella tructae WS08 | 1,270 | 845 | 95 | 94 | |
wtr | Weissella tructae W-1 | 1,307 | 826 | 85 | 2 | |
wct | Weissella ceti WS74 | 1,338 | 845 | 97 | 96 | |
wci | Weissella ceti WS105 | 1,338 | 844 | 90 | 89 | |
wcb | Weissella cibaria | 2,262 | 1,206 | 113 | 113 | |
wjo | Weissella jogaejeotgali | 2,067 | 1,202 | 100 | 99 | |
wpa | Weissella paramesenteroides | 1,787 | 1,143 | 106 | 105 | |
wcf | Weissella confusa | 1,932 | 1,097 | 116 | 116 | |
wso | Weissella soli | 1,553 | 997 | 84 | 84 | |
whe | Weissella hellenica | 1,778 | 1,072 | 104 | 103 | |
wdi | Weissella diestrammenae | 1,511 | 908 | 75 | 75 | |
wvr | Weissella viridescens | 1,451 | 934 | 106 | 105 | |
wco | Weissella coleopterorum | 1,464 | 780 | 74 | 74 | |
Periweissella | ||||||
wei | Periweissella cryptocerci | 2,589 | 1,228 | 99 | 95 | |
Fructobacillus | ||||||
fru | Fructobacillus americanaquae | 1,289 | 806 | 79 | 79 | |
Nicoliella | ||||||
lbe | Nicoliella spurrieriana | 1,628 | 906 | 82 | 82 | |
Xylocopilactobacillus | ||||||
xak | Xylocopilactobacillus apis | 2,121 | 1,098 | 58 | 9 | |
xap | Xylocopilactobacillus apicola | 2,180 | 1,114 | 59 | 6 | |
Agrilactobacillus | ||||||
afk | Agrilactobacillus fermenti | 2,457 | 1,332 | 80 | ||
Enterococcus | ||||||
efa | Enterococcus faecalis V583 | Ref | 3,265 | 1,564 | 80 | |
efl | Enterococcus faecalis 62 | 3,027 | 1,632 | 67 | 67 | |
efi | Enterococcus faecalis OG1RF | 2,579 | 1,519 | 79 | 73 | |
efd | Enterococcus faecalis D32 | 2,965 | 1,571 | 74 | 74 | |
efs | Enterococcus faecalis Symbioflor 1 | 2,733 | 1,560 | 75 | 75 | |
efn | Enterococcus faecalis DENG1 | 2,884 | 1,588 | 74 | 74 | |
efq | Enterococcus faecalis ATCC 29212 | 2,844 | 1,593 | 73 | 72 | |
ene | Enterococcus faecalis 7L76 | 2,295 | 1,239 | 53 | 36 | |
efc | Enterococcus faecium Aus0004 | 2,932 | 1,576 | 65 | 65 | |
efau | Enterococcus faecium Aus0085 | 3,221 | 1,693 | 96 | 93 | |
efu | Enterococcus faecium DO | 3,114 | 1,694 | 95 | 85 | |
efm | Enterococcus faecium ATCC 8459 = NRRL B-2354 | 2,639 | 1,456 | 65 | 65 | |
eft | Enterococcus faecium T110 | 2,522 | 1,441 | 84 | 84 | |
ehr | Enterococcus hirae | 2,755 | 1,354 | 89 | 87 | |
ecas | Enterococcus casseliflavus | 3,114 | 1,894 | 75 | 75 | |
emu | Enterococcus mundtii | 3,221 | 1,540 | 81 | 81 | |
edu | Enterococcus durans | 2,569 | 1,512 | 87 | 87 | |
ega | Enterococcus gallinarum | 3,502 | 1,964 | 80 | 79 | |
ess | Enterococcus silesiacus | 3,559 | 1,838 | 27 | 27 | |
eth | Enterococcus thailandicus | 2,370 | 1,395 | 87 | 71 | |
egv | Enterococcus gilvus | 3,667 | 1,958 | 87 | 71 | |
eav | Enterococcus avium | 4,608 | 2,481 | 90 | 71 | |
esg | Enterococcus saigonensis | 2,700 | 1,556 | 83 | 63 | |
elac | Enterococcus lactis | 2,469 | 1,474 | 91 | 75 | |
ecec | Enterococcus cecorum | 2,382 | 1,404 | 90 | 69 | |
eraf | Enterococcus raffinosus | 3,952 | 2,113 | 93 | 74 | |
eie | Enterococcus innesii | 3,344 | 1,908 | 77 | 64 | |
eds | Enterococcus dispar | 2,587 | 1,437 | 87 | 13 | |
ems | Enterococcus montenegrensis | 2,580 | 1,492 | 87 | 9 | |
eni | Enterococcus sp. CR-Ec1 | 3,577 | 1,918 | 81 | 1 | |
erx | Enterococcus rotai | 3,253 | 1,414 | 30 | ||
enq | Enterococcus sp. SB12 | 2,523 | 1,451 | 92 | ||
Melissococcus | ||||||
mps | Melissococcus plutonius ATCC 35311 | 1,885 | 1,097 | 74 | 74 | |
mpx | Melissococcus plutonius DAT561 | 1,671 | 1,075 | 67 | 67 | |
Tetragenococcus | ||||||
thl | Tetragenococcus halophilus NBRC 12172 | 2,555 | 1,459 | 79 | 79 | |
tey | Tetragenococcus halophilus YJ1 | 2,203 | 1,358 | 81 | 66 | |
too | Tetragenococcus osmophilus | 2,126 | 1,366 | 80 | 68 | |
tkr | Tetragenococcus koreensis | 2,439 | 1,489 | 82 | 70 | |
Vagococcus | ||||||
vte | Vagococcus teuberi | 1,935 | 1,269 | 81 | 78 | |
vpi | Vagococcus penaei | 2,092 | 1,367 | 91 | 84 | |
vac | Vagococcus xieshaowenii | 1,879 | 1,128 | 84 | 74 | |
vao | Vagococcus zengguangii | 1,978 | 1,239 | 83 | 64 | |
vah | Vagococcus coleopterorum | 1,442 | 943 | 74 | 56 | |
vcp | Vagococcus carniphilus | 2,901 | 1,680 | 108 | 85 | |
vhy | Vagococcus hydrophili | 2,814 | 1,640 | 113 | 84 | |
vfv | Vagococcus fluvialis | 2,801 | 1,532 | 104 | 74 | |
vlu | Vagococcus lutrae | 1,920 | 1,216 | 74 | 46 | |
vlc | Vagococcus luciliae | 2,016 | 1,250 | 80 | 10 | |
vie | Vagococcus intermedius | 2,088 | 1,260 | 90 | 9 | |
Aerococcus | ||||||
aur | Aerococcus sp. Group 1 | 1,726 | 1,142 | 79 | 75 | |
aun | Aerococcus urinae | 1,712 | 1,159 | 76 | 75 | |
aui | Aerococcus urinaeequi | 1,805 | 1,234 | 79 | 78 | |
asan | Aerococcus sanguinicola | 1,733 | 1,100 | 78 | 77 | |
acg | Aerococcus christensenii | 1,428 | 918 | 76 | 75 | |
avs | Aerococcus viridans | 1,914 | 1,267 | 81 | 80 | |
auh | Aerococcus urinaehominis | 1,605 | 1,053 | 73 | 72 | |
aloy | Aerococcus loyolae | 1,756 | 1,120 | 76 | 1 | |
amit | Aerococcus mictus | 1,855 | 1,147 | 76 | 3 | |
atj | Aerococcus tenax | 1,834 | 1,089 | 76 | ||
Abiotrophia | ||||||
adc | Abiotrophia defectiva | 1,819 | 1,105 | 63 | 47 | |
Suicoccus | ||||||
abae | Suicoccus acidiformans | 2,253 | 1,318 | 77 | 65 | |
Ignavigranum | ||||||
iru | Ignavigranum ruoffiae | 1,765 | 1,084 | 57 | 33 | |
Globicatella | ||||||
gsg | Globicatella sanguinis | 2,184 | 1,269 | 86 | 10 | |
Fundicoccus | ||||||
fct | Fundicoccus culcitae | 2,823 | 1,599 | 60 | 1 | |
Facklamia | ||||||
fhm | Facklamia hominis | 1,848 | 989 | 62 | 1 | |
Ruoffia | ||||||
rtf | Ruoffia tabacinasalis | 2,183 | 1,226 | 68 | ||
Carnobacterium | ||||||
crn | Carnobacterium sp. 17-4 | 2,474 | 1,564 | 92 | 92 | |
cml | Carnobacterium maltaromaticum | 3,581 | 1,706 | 78 | 77 | |
caw | Carnobacterium inhibens | 2,275 | 1,373 | 101 | 101 | |
carc | Carnobacterium sp. CP1 | 2,417 | 1,470 | 102 | 84 | |
cdj | Carnobacterium divergens | 2,419 | 1,394 | 84 | 69 | |
carn | Carnobacterium sp. PL17GRE32 | 1,771 | 1,189 | 59 | 54 | |
cvd | Carnobacterium viridans | 2,312 | 1,265 | 88 | 70 | |
Marinilactibacillus | ||||||
marr | Marinilactibacillus sp. 15R | 2,552 | 1,516 | 81 | 73 | |
Jeotgalibaca | ||||||
jep | Jeotgalibaca sp. PTS2502 | 2,132 | 1,301 | 93 | 92 | |
jda | Jeotgalibaca dankookensis | 2,014 | 1,258 | 96 | 96 | |
jeh | Jeotgalibaca ciconiae | 2,611 | 1,604 | 97 | 96 | |
jar | Jeotgalibaca arthritidis | 2,191 | 1,356 | 93 | 92 | |
jpo | Jeotgalibaca porci | 2,229 | 1,361 | 102 | 100 | |
jem | Jeotgalibaca sp. MA1X17-3 | 2,205 | 1,056 | 101 | 5 | |
Dolosigranulum | ||||||
dpm | Dolosigranulum pigrum | 1,920 | 1,122 | 71 | 53 | |
dst | Dolosigranulum savutiense | 1,750 | 1,141 | 69 | ||
Granulicatella | ||||||
gad | Granulicatella adiacens | 1,841 | 1,074 | 77 | 56 | |
geg | Granulicatella elegans | 1,725 | 1,050 | 78 | 10 | |
Desemzia | ||||||
dinc | Desemzia incerta | 2,208 | 1,293 | 109 | 5 | |
Clostridia | ||||||
Clostridium | ||||||
cac | Clostridium acetobutylicum ATCC 824 | Ref | 3,848 | 1,809 | 107 | 103 |
cae | Clostridium acetobutylicum DSM 1731 | 3,922 | 1,883 | 107 | 107 | |
cay | Clostridium acetobutylicum EA 2018 | 3,916 | 1,882 | 108 | 108 | |
cpe | Clostridium perfringens 13 | Ref | 2,723 | 1,463 | 125 | 125 |
cpf | Clostridium perfringens ATCC 13124 | 2,876 | 1,520 | 117 | 117 | |
cpr | Clostridium perfringens SM101 | 2,566 | 1,427 | 94 | 94 | |
ctc | Clostridium tetani E88 | 2,432 | 1,405 | 72 | 72 | |
ctet | Clostridium tetani 12124569 | 2,845 | 1,495 | 135 | 72 | |
cno | Clostridium novyi | 2,325 | 1,339 | 111 | 111 | |
cbo | Clostridium botulinum A ATCC 3502 | Ref | 3,592 | 1,756 | 110 | 109 |
cba | Clostridium botulinum A ATCC 19397 | 3,551 | 1,781 | 106 | 106 | |
cbh | Clostridium botulinum A Hall | 3,403 | 1,736 | 112 | 108 | |
cby | Clostridium botulinum A2 | 3,878 | 1,831 | 105 | 102 | |
cbl | Clostridium botulinum A3 Loch Maree | 3,983 | 1,874 | 114 | 110 | |
cbk | Clostridium botulinum B Eklund 17B (NRP) | 3,475 | 1,720 | 116 | 114 | |
cbb | Clostridium botulinum B1 Okra | 3,846 | 1,851 | 112 | 111 | |
cbi | Clostridium botulinum Ba4 | 4,003 | 1,864 | 116 | 111 | |
cbn | Clostridium botulinum BKT015925 | 2,994 | 1,491 | 115 | 115 | |
cbt | Clostridium botulinum E3 | 3,257 | 1,722 | 117 | 116 | |
cbf | Clostridium botulinum F Langeland | 3,655 | 1,812 | 116 | 111 | |
cbm | Clostridium botulinum F 230613 | 3,527 | 1,710 | 93 | 93 | |
cbj | Clostridium botulinum H04402 065 | 3,694 | 1,813 | 91 | 91 | |
cbe | Clostridium beijerinckii NCIMB 8052 | 5,020 | 2,642 | 141 | 141 | |
cbz | Clostridium beijerinckii ATCC 35702 | 5,017 | 2,647 | 141 | 133 | |
cbei | Clostridium beijerinckii NCIMB 14988 | 5,425 | 2,804 | 148 | 106 | |
ckl | Clostridium kluyveri DSM 555 | 3,913 | 1,901 | 81 | 81 | |
ckr | Clostridium kluyveri NBRC 12016 | 3,523 | 1,895 | 81 | 81 | |
clj | Clostridium ljungdahlii | 4,184 | 2,150 | 99 | 99 | |
ccb | Clostridium cellulovorans | 4,254 | 2,076 | 112 | 111 | |
cls | Clostridium sp. SY8519 | 2,619 | 1,384 | 65 | 64 | |
clb | Clostridium sp. BNL1100 | 3,920 | 1,974 | 88 | 87 | |
csr | Clostridium saccharoperbutylacetonicum | 5,821 | 2,750 | 105 | 105 | |
cpas | Clostridium pasteurianum BC1 | 4,512 | 2,208 | 111 | 103 | |
cpat | Clostridium pasteurianum DSM 525 = ATCC 6013 | 3,988 | 2,059 | 111 | 111 | |
cpae | Clostridium pasteurianum DSM 525 = ATCC 6013 | 3,988 | 2,059 | 111 | 111 | |
csb | Clostridium saccharobutylicum | 4,393 | 2,147 | 122 | 122 | |
cah | Clostridium autoethanogenum | 3,884 | 1,989 | 101 | 98 | |
clt | Clostridium bornimense | 3,293 | 1,725 | 81 | 81 | |
cbv | Clostridium baratii | 3,169 | 1,683 | 109 | 99 | |
csq | Clostridium scatologenes | 5,333 | 2,606 | 90 | 84 | |
cld | Clostridium sporogenes | 3,732 | 1,927 | 107 | 107 | |
cace | Clostridium aceticum | 3,853 | 2,133 | 92 | 91 | |
cck | Clostridium carboxidivorans | 4,973 | 2,603 | 105 | 99 | |
cbut | Clostridium butyricum | 3,893 | 2,180 | 121 | 104 | |
ctyk | Clostridium tyrobutyricum | 3,106 | 1,674 | 82 | 66 | |
ceu | Clostridium estertheticum | 4,216 | 2,214 | 141 | 92 | |
ctae | Clostridium taeniosporum | 2,986 | 1,573 | 106 | 95 | |
cfm | Clostridium formicaceticum | 4,022 | 2,184 | 172 | 137 | |
cchv | Clostridium chauvoei | 2,521 | 1,437 | 118 | 92 | |
carg | Clostridium argentinense | 4,057 | 1,993 | 129 | 106 | |
cdrk | Clostridium drakei | 4,893 | 2,574 | 126 | 95 | |
cia | Clostridium isatidis | 2,572 | 1,526 | 114 | 89 | |
csep | Clostridium septicum | 2,959 | 1,593 | 124 | 95 | |
cdy | Clostridium diolis | 4,955 | 2,646 | 142 | 97 | |
ccoh | Clostridium cochlearium | 2,341 | 1,349 | 89 | 69 | |
cfer | Clostridium fermenticellae | 2,449 | 1,471 | 105 | 79 | |
cgas | Clostridium gasigenes | 3,694 | 2,007 | 118 | 82 | |
clos | Clostridium sp. AWRP | 4,028 | 2,060 | 105 | 73 | |
ccaa | Clostridium cadaveris | 3,326 | 1,696 | 112 | 80 | |
cmah | Clostridium manihotivorum | 5,212 | 2,333 | 140 | 84 | |
crw | Clostridium felsineum DSM 7320 | 4,696 | 2,066 | 107 | 81 | |
cfb | Clostridium felsineum DSM 794 | 4,763 | 2,070 | 113 | 81 | |
caun | Clostridium felsineum DSM 793 | 4,675 | 2,060 | 106 | 81 | |
cnn | Clostridium neonatale | 4,055 | 1,999 | 192 | 90 | |
cgel | Clostridium gelidum | 5,544 | 2,172 | 111 | 81 | |
ctag | Clostridium tagluense | 4,869 | 1,973 | 143 | 7 | |
cint | Clostridium intestinale | 4,646 | 2,166 | 121 | 2 | |
cthd | Clostridium thermosuccinogenes | 3,940 | 2,060 | 75 | 62 | |
clod | Clostridium sp. MD294 | 2,798 | 1,273 | 72 | ||
clol | Clostridium sp. LQ25 | 4,011 | 2,066 | 107 | ||
ciu | Clostridium innocuum | 3,920 | 2,005 | 66 | 41 | |
Arthromitus | ||||||
asf | Candidatus Arthromitus sp. SFB-mouse-Japan | 1,491 | 910 | 55 | 55 | |
asm | Candidatus Arthromitus sp. SFB-mouse-Yit | 1,420 | 908 | 53 | 53 | |
aso | Candidatus Arthromitus sp. SFB-mouse-NL | 1,598 | 918 | 53 | 44 | |
asb | Candidatus Arthromitus sp. SFB-rat-Yit | 1,346 | 896 | 55 | 55 | |
Hathewaya | ||||||
hhw | Hathewaya histolytica | 2,580 | 1,394 | 121 | 95 | |
Caloramator | ||||||
cale | Caloramator sp. E03 | 2,678 | 1,656 | 82 | 61 | |
cald | Caloramator sp. Dgby_cultured_2 | 2,740 | 677 | 94 | 1 | |
Crassaminicella | ||||||
crs | Crassaminicella thermophila | 2,888 | 1,624 | 173 | 141 | |
cprf | Crassaminicella profunda | 4,035 | 2,019 | 166 | 128 | |
cras | Crassaminicella indica | 2,427 | 1,286 | 158 | 47 | |
Sarcina | ||||||
sarj | Sarcina sp. JB2 | 2,364 | 1,318 | 108 | 78 | |
Oceanirhabdus | ||||||
ocw | Oceanirhabdus sp. W0125-5 | 5,162 | 1,717 | 163 | 4 | |
Proteiniclasticum | ||||||
proq | Proteiniclasticum sp. QWL-01 | 3,232 | 1,383 | 71 | ||
Mageeibacillus | ||||||
clo | Mageeibacillus indolicus | 1,567 | 904 | 54 | 54 | |
Fastidiosipila | ||||||
fsa | Fastidiosipila sanguinis | 1,458 | 842 | 51 | 30 | |
Acetivibrio | ||||||
cth | Acetivibrio thermocellus ATCC 27405 | 3,173 | 1,662 | 71 | 71 | |
ctx | Acetivibrio thermocellus DSM 1313 | 2,911 | 1,591 | 72 | 71 | |
ccl | Acetivibrio clariflavus | 3,892 | 1,908 | 90 | 80 | |
hsc | Acetivibrio saccincola | 3,125 | 1,458 | 62 | 53 | |
Ruminiclostridium | ||||||
cce | Ruminiclostridium cellulolyticum | 3,390 | 1,790 | 88 | 87 | |
rher | Ruminiclostridium herbifermentans | 3,707 | 1,834 | 79 | 39 | |
rpay | Ruminiclostridium papyrosolvens | 4,274 | 2,006 | 90 | 5 | |
Thermoclostridium | ||||||
css | Thermoclostridium stercorarium subsp. stercorarium DSM 8532 | 2,687 | 1,563 | 57 | 57 | |
csd | Thermoclostridium stercorarium subsp. stercorarium DSM 8532 | 2,546 | 1,559 | 60 | 60 | |
Flavonifractor | ||||||
fpla | Flavonifractor plautii | 3,592 | 1,797 | 65 | 54 | |
Ethanoligenens | ||||||
eha | Ethanoligenens harbinense | 2,701 | 1,434 | 75 | 72 | |
Ruminococcus | ||||||
ral | Ruminococcus albus | 3,872 | 1,513 | 90 | 87 | |
rch | Ruminococcus champanellensis | 2,114 | 1,028 | 48 | 47 | |
rum | Ruminococcus sp. SR1/5 | 3,260 | 1,439 | 53 | 49 | |
rus | Ruminococcus bicirculans (ex Wegman et al. 2014) | 2,585 | 1,231 | 67 | 67 | |
ruj | Ruminococcus bovis | 2,200 | 1,125 | 74 | 55 | |
rgv | Ruminococcus gauvreauii | 3,728 | 1,382 | 79 | 47 | |
ruc | Ruminococcus sp. FMB-CY1 | 2,214 | 1,046 | 79 | ||
Faecalibacterium | ||||||
fpr | Faecalibacterium prausnitzii L2-6 | 2,756 | 1,299 | 64 | 63 | |
fpa | Faecalibacterium prausnitzii SL3/3 | 2,746 | 1,252 | 70 | 70 | |
fpra | Faecalibacterium duncaniae A2165 | 2,815 | 1,363 | 85 | 61 | |
fdu | Faecalibacterium duncaniae JCM 31915 | 2,822 | 1,352 | 85 | 61 | |
ftk | Faecalibacterium taiwanense | 2,708 | 1,255 | 85 | 1 | |
fah | Faecalibacterium wellingii | 2,484 | 1,276 | 87 | 1 | |
Oscillibacter | ||||||
ova | Oscillibacter valericigenes | 4,723 | 1,914 | 70 | 69 | |
Dysosmobacter | ||||||
obj | Dysosmobacter welbionis | 3,352 | 1,380 | 75 | 55 | |
Caproicibacterium | ||||||
caml | Caproicibacterium amylolyticum | 2,790 | 1,502 | 73 | 49 | |
clf | Caproicibacterium lactatifermentans | 1,836 | 1,105 | 67 | ||
carl | Caproicibacterium argilliputei | 2,716 | 1,414 | 67 | 2 | |
Solibaculum | ||||||
sman | Solibaculum mannosilyticum | 2,286 | 1,185 | 65 | 39 | |
Pusillibacter | ||||||
pfaa | Pusillibacter faecalis | 3,487 | 1,537 | 68 | 36 | |
Vescimonas | ||||||
vfa | Vescimonas fastidiosa | 2,429 | 1,038 | 64 | 33 | |
vcop | Vescimonas coprocola | 2,444 | 1,100 | 68 | 35 | |
Anaerotruncus | ||||||
acol | Anaerotruncus colihominis | 3,344 | 1,657 | 69 | 54 | |
Subdoligranulum | ||||||
svj | Subdoligranulum variabile | 2,961 | 987 | 76 | 7 | |
Lawsonibacter | ||||||
lasa | Lawsonibacter asaccharolyticus | 2,909 | 1,378 | 63 | 36 | |
Thermocaproicibacter | ||||||
tmel | Thermocaproicibacter melissae | 1,800 | 1,090 | 70 | 4 | |
Petroclostridium | ||||||
petr | Petroclostridium sp. X23 | 4,997 | 2,374 | 97 | 4 | |
Paludihabitans | ||||||
palm | Paludihabitans sp. MB14-C6 | 2,708 | 1,312 | 63 | 1 | |
Amygdalobacter | ||||||
aim | Amygdalobacter indicium | 1,259 | 782 | 54 | 2 | |
anq | Amygdalobacter nucleatus | 1,300 | 760 | 54 | 1 | |
Bengtsoniella | ||||||
bie | Bengtsoniella intestinalis | 3,504 | 1,452 | 68 | ||
Owariibacterium | ||||||
oko | Owariibacterium komagatae | 3,541 | 1,549 | 67 | 1 | |
unclassified Oscillospiraceae | ||||||
ruk | Hungateiclostridiaceae bacterium KB18 | 3,657 | 1,567 | 63 | 51 | |
rbp | Ruminococcaceae bacterium CPB6 | 1,934 | 1,118 | 68 | 52 | |
esr | Eubacterium siraeum V10Sc8a | 2,211 | 1,087 | 43 | 42 | |
esu | Eubacterium siraeum 70/3 | 2,347 | 1,087 | 51 | 47 | |
ccel | Clostridium cellulosi | 2,017 | 1,280 | 71 | 59 | |
Caproiciproducens | ||||||
capr | Caproiciproducens sp. NJN-50 | 3,099 | 1,738 | 69 | 50 | |
Caproicibacter | ||||||
cfem | Caproicibacter fermentans | 3,635 | 1,810 | 77 | 56 | |
Acutalibacter | ||||||
amur | Acutalibacter muris | 3,668 | 1,501 | 63 | ||
Agathobaculum | ||||||
agat | Agathobaculum sp. NTUH-O15-33 | 3,716 | 1,729 | 71 | 2 | |
Intestinibacillus | ||||||
int | Intestinibacillus sp. NTUH-41-i26 | 3,011 | 1,440 | 71 | ||
Symbiobacterium | ||||||
sth | Symbiobacterium thermophilum | 3,337 | 1,855 | 139 | 116 | |
Caldinitratiruptor | ||||||
cmic | Caldinitratiruptor microaerophilus | 3,544 | 1,436 | 81 | 7 | |
Syntrophomonas | ||||||
swo | Syntrophomonas wolfei | 2,504 | 1,429 | 68 | 67 | |
Syntrophothermus | ||||||
slp | Syntrophothermus lipocalidus | 2,313 | 1,380 | 55 | 54 | |
Syntrophocurvum | ||||||
salq | Candidatus Syntrophocurvum alkaliphilum | 2,301 | 1,323 | 48 | 40 | |
Desulfitobacterium | ||||||
dsy | Desulfitobacterium hafniense Y51 | 5,060 | 2,554 | 77 | 77 | |
dhd | Desulfitobacterium hafniense DCB-2 | 4,883 | 2,435 | 93 | 92 | |
ddh | Desulfitobacterium dehalogenans | 4,011 | 2,043 | 99 | 95 | |
ddl | Desulfitobacterium dichloroeliminans | 3,340 | 1,852 | 98 | 93 | |
dmt | Desulfitobacterium metallireducens | 3,046 | 1,683 | 97 | 96 | |
Syntrophobotulus | ||||||
sgy | Syntrophobotulus glycolicus | 3,251 | 1,702 | 69 | 68 | |
Desulfosporosinus | ||||||
dor | Desulfosporosinus orientis | 5,242 | 2,711 | 105 | 99 | |
dai | Desulfosporosinus acidiphilus | 4,505 | 2,247 | 94 | 93 | |
dmi | Desulfosporosinus meridiei | 4,352 | 2,280 | 116 | 112 | |
Dehalobacter | ||||||
ded | Dehalobacter sp. DCA | 2,978 | 1,565 | 60 | 60 | |
dec | Dehalobacter sp. CF | 2,980 | 1,563 | 60 | 60 | |
drs | Dehalobacter restrictus | 2,790 | 1,484 | 65 | 65 | |
Desulfotomaculum | ||||||
dca | Desulfotomaculum nigrificans | 2,657 | 1,587 | 95 | 92 | |
Pelotomaculum | ||||||
pth | Pelotomaculum thermopropionicum | 2,920 | 1,592 | 57 | 56 | |
Desulforamulus | ||||||
drm | Desulforamulus reducens | 3,276 | 1,806 | 100 | 100 | |
dru | Desulforamulus ruminis | 3,796 | 1,980 | 86 | 82 | |
dfg | Desulforamulus ferrireducens | 2,995 | 1,722 | 99 | 75 | |
Desulfofarcimen | ||||||
dae | Desulfofarcimen acetoxidans | 4,068 | 1,856 | 101 | 94 | |
Desulfofundulus | ||||||
dku | Desulfofundulus kuznetsovii | 3,398 | 1,761 | 59 | 58 | |
Thermanaerosceptrum | ||||||
tfr | Thermanaerosceptrum fracticalcis | 3,664 | 2,045 | 75 | 52 | |
Formimonas | ||||||
fwa | Candidatus Formimonas warabiya | 5,602 | 3,085 | 72 | 53 | |
Acididesulfobacillus | ||||||
aacx | Acididesulfobacillus acetoxydans | 4,104 | 2,113 | 206 | 30 | |
Thermincola | ||||||
tjr | Thermincola potens | 2,949 | 1,665 | 67 | 65 | |
Desulfoscipio | ||||||
dgi | Desulfoscipio gibsoniae | 4,352 | 2,146 | 89 | 84 | |
Heliomicrobium | ||||||
hmo | Heliomicrobium modesticaldum | 3,000 | 1,529 | 130 | 128 | |
Heliorestis | ||||||
hcv | Heliorestis convoluta | 3,263 | 1,595 | 113 | 107 | |
Eubacterium | ||||||
elm | Eubacterium callanderi | 4,579 | 1,920 | 74 | 74 | |
emt | Eubacterium maltosivorans | 3,950 | 1,893 | 81 | 60 | |
elim | Eubacterium limosum | 4,029 | 1,986 | 84 | 49 | |
evn | Eubacterium ventriosum | 2,498 | 899 | 81 | 4 | |
Acetobacterium | ||||||
awo | Acetobacterium woodii | 3,473 | 1,825 | 75 | 75 | |
awi | Acetobacterium wieringae | 3,529 | 1,676 | 77 | 24 | |
Alkalibacter | ||||||
alka | Alkalibacter rhizosphaerae | 2,323 | 1,378 | 68 | 53 | |
Alkalicella | ||||||
acae | Alkalicella caledoniensis | 3,489 | 1,809 | 94 | 63 | |
Aristaeella | ||||||
alac | Aristaeella lactis | 3,026 | 1,346 | 60 | 3 | |
ahc | Aristaeella hokkaidonensis | 2,956 | 1,406 | 60 | 2 | |
Thermaerobacter | ||||||
tmr | Thermaerobacter marianensis | 2,327 | 1,475 | 60 | 56 | |
thef | Thermaerobacter sp. FW80 | 2,206 | 1,394 | 56 | 52 | |
thep | Thermaerobacter sp. PB12/4term | 2,229 | 1,433 | 57 | 49 | |
tcp | Thermaerobacter composti | 2,363 | 1,395 | 57 | ||
Sulfobacillus | ||||||
say | Sulfobacillus acidophilus TPY | 3,754 | 1,871 | 67 | 67 | |
sap | Sulfobacillus acidophilus DSM 10332 | 3,471 | 1,848 | 69 | 68 | |
sthr | Sulfobacillus thermotolerans | 3,121 | 1,699 | 67 | 51 | |
Hydrogenisulfobacillus | ||||||
hfv | Candidatus Hydrogenisulfobacillus filiaventi | 2,756 | 1,277 | 242 | ||
Carboxydocella | ||||||
cthm | Carboxydocella thermautotrophica | 2,686 | 1,576 | 109 | 68 | |
Intestinimonas | ||||||
ibu | Intestinimonas butyriciproducens | 3,381 | 1,575 | 59 | 46 | |
Fenollaria | ||||||
fms | Fenollaria massiliensis | 1,438 | 889 | 64 | 46 | |
Proteiniborus | ||||||
prom | Proteiniborus sp. MB09-C3 | 3,617 | 1,711 | 102 | 5 | |
unclassified Eubacteriales | ||||||
bpen | Bacteroides pectinophilus | 2,807 | 1,280 | 65 | 1 | |
bprm | Butyrate-producing bacterium SM4/1 | 1,684 | 626 | 31 | 30 | |
bprs | Butyrate-producing bacterium SS3/4 | 2,993 | 1,393 | 58 | 56 | |
cbaf | Clostridiales bacterium FE2010 | 3,075 | 1,415 | 60 | 3 | |
Butyrivibrio | ||||||
bpb | Butyrivibrio proteoclasticus | 3,811 | 1,682 | 68 | 68 | |
bfi | Butyrivibrio fibrisolvens | 2,904 | 1,299 | 62 | 60 | |
bhu | Butyrivibrio hungatei | 3,003 | 1,510 | 60 | 50 | |
Eshraghiella | ||||||
bcro | Eshraghiella crossota | 2,410 | 907 | 61 | 3 | |
Roseburia | ||||||
rho | Roseburia hominis | 3,362 | 1,692 | 70 | 70 | |
rix | Roseburia intestinalis XB6B4 | 3,630 | 1,644 | 69 | 66 | |
rim | Roseburia intestinalis M50/1 | 3,478 | 1,591 | 56 | 55 | |
rrk | Roseburia rectibacter | 3,451 | 1,679 | 87 | 3 | |
rfc | Roseburia faecis | 3,180 | 1,489 | 68 | ||
Coprococcus | ||||||
coo | Coprococcus sp. ART55/1 | 2,128 | 1,068 | 34 | 31 | |
cct | Coprococcus catus | 2,985 | 1,443 | 55 | 50 | |
ccom | Coprococcus comes | 3,092 | 1,601 | 89 | 56 | |
cev | Coprococcus eutactus | 2,611 | 1,335 | 74 | 57 | |
Blautia | ||||||
rob | Blautia obeum | 3,155 | 1,561 | 55 | 49 | |
byl | Blautia pseudococcoides | 4,527 | 2,366 | 86 | 79 | |
bhan | Blautia hansenii | 2,893 | 1,526 | 84 | 63 | |
blau | Blautia argi | 2,745 | 1,512 | 76 | 59 | |
bpro | Blautia producta | 5,546 | 2,854 | 82 | 67 | |
blab | Blautia sp. SC05B48 | 3,209 | 1,778 | 90 | 67 | |
bliq | Blautia liquoris | 3,089 | 1,788 | 73 | 46 | |
bwx | Blautia wexlerae | 4,162 | 1,569 | 85 | 65 | |
bmas | Blautia massiliensis | 3,354 | 1,495 | 87 | 5 | |
blar | Blautia parvula | 5,458 | 2,686 | 84 | 4 | |
blui | Blautia luti | 3,431 | 1,638 | 82 | 2 | |
bcoc | Blautia coccoides | 5,391 | 2,582 | 75 | ||
bhv | Blautia hydrogenotrophica | 3,387 | 1,730 | 78 | 1 | |
Lachnoclostridium | ||||||
cpy | Lachnoclostridium phytofermentans | 3,902 | 2,128 | 89 | 87 | |
lacy | Lachnoclostridium sp. YL32 | 6,247 | 2,808 | 96 | 71 | |
csci | Clostridium scindens | 3,656 | 1,786 | 72 | 55 | |
chyl | Clostridium hylemonae | 3,621 | 1,930 | 63 | 4 | |
Lacrimispora | ||||||
csh | Clostridium saccharolyticum WM1 | 4,154 | 2,291 | 90 | 89 | |
cso | Clostridium cf. saccharolyticum K10 | 3,073 | 1,383 | 51 | 51 | |
lxa | Lacrimispora xylanolytica | 4,046 | 1,648 | 89 | 4 | |
lsia | Lacrimispora sinapis | 3,390 | 1,808 | 88 | ||
Anaerostipes | ||||||
bprl | Anaerostipes hadrus | 2,771 | 1,417 | 55 | 55 | |
arf | Anaerostipes rhamnosivorans | 3,556 | 1,957 | 65 | 54 | |
acac | Anaerostipes caccae | 3,369 | 1,941 | 73 | 51 | |
Herbinix | ||||||
hsd | Herbinix luporum | 2,362 | 1,340 | 65 | 54 | |
Lachnoanaerobaculum | ||||||
lua | Lachnoanaerobaculum umeaense | 2,413 | 1,276 | 69 | 44 | |
lgg | Lachnoanaerobaculum gingivalis | 2,749 | 1,370 | 69 | 1 | |
Anaerobutyricum | ||||||
ehl | Anaerobutyricum hallii | 3,093 | 1,601 | 243 | 71 | |
Pseudobutyrivibrio | ||||||
pxv | Pseudobutyrivibrio xylanivorans | 3,078 | 1,539 | 69 | 56 | |
Anaerocolumna | ||||||
anr | Anaerocolumna sedimenticola | 4,512 | 2,337 | 86 | 55 | |
acel | Anaerocolumna cellulosilytica | 4,528 | 2,262 | 76 | 54 | |
acht | Anaerocolumna chitinilytica | 4,958 | 2,238 | 75 | 45 | |
Lachnospira | ||||||
eel | Eubacterium eligens | 2,765 | 1,389 | 65 | 65 | |
Mediterraneibacter | ||||||
rto | Ruminococcus torques | 2,798 | 1,428 | 50 | 48 | |
rgn | Mediterraneibacter gnavus | 3,345 | 1,666 | 77 | 57 | |
rlr | Ruminococcus lactaris | 2,424 | 1,016 | 73 | 6 | |
Enterocloster | ||||||
cbol | Enterocloster bolteae | 5,940 | 3,031 | 91 | 69 | |
casp | Clostridium asparagiforme | 5,578 | 1,839 | 86 | 4 | |
eclf | Enterocloster clostridioformis | 7,789 | 2,770 | 101 | ||
Dorea | ||||||
dlo | Dorea longicatena | 3,185 | 1,531 | 78 | 59 | |
dfm | Dorea formicigenerans | 2,987 | 1,129 | 76 | 6 | |
Sellimonas | ||||||
sint | Sellimonas intestinalis | 2,935 | 1,563 | 80 | 50 | |
scag | Sellimonas caecigallum | 2,552 | 1,368 | 80 | ||
scaz | Sellimonas catena | 3,600 | 1,612 | 80 | ||
Wujia | ||||||
wcp | Wujia chipingensis | 2,641 | 1,324 | 62 | 38 | |
Simiaoa | ||||||
ssun | Simiaoa sunii | 3,164 | 1,553 | 75 | 43 | |
Qiania | ||||||
qdo | Qiania dongpingensis | 2,795 | 1,460 | 71 | 38 | |
Wansuia | ||||||
whj | Wansuia hejianensis | 3,505 | 1,859 | 77 | 49 | |
Marvinbryantia | ||||||
mfor | Marvinbryantia formatexigens | 4,117 | 1,316 | 70 | 46 | |
Anaeromicropila | ||||||
ahb | Anaeromicropila herbilytica | 4,324 | 1,401 | 99 | 5 | |
Stomatobaculum | ||||||
stom | Stomatobaculum sp. F0698 | 1,845 | 1,001 | 70 | 1 | |
Agathobacter | ||||||
ere | Agathobacter rectalis ATCC 33656 | 3,626 | 1,594 | 77 | 75 | |
ert | Agathobacter rectalis DSM 17629 | 2,898 | 1,400 | 48 | 47 | |
era | Agathobacter rectalis M104/1 | 3,212 | 1,452 | 55 | 53 | |
Kineothrix | ||||||
kib | Kineothrix sp. MB12-C1 | 3,505 | 1,784 | 71 | 3 | |
Claveliimonas | ||||||
cbil | Claveliimonas bilis | 2,893 | 1,438 | 64 | 3 | |
Hungatella | ||||||
hhj | Hungatella hathewayi | 6,145 | 1,925 | 93 | 69 | |
unclassified Lachnospiraceae | ||||||
lbw | Lachnospiraceae bacterium oral taxon 500 | 2,798 | 1,464 | 58 | 41 | |
lbx | Lachnospiraceae bacterium KM106-2 | 4,174 | 1,869 | 93 | 3 | |
lbp | Lachnospiraceae bacterium JLR.KK008 | 3,030 | 1,379 | 71 | ||
Anaerotignum | ||||||
cpro | Anaerotignum propionicum | 2,926 | 1,470 | 84 | 63 | |
anv | Anaerotignum sp. MB30-C6 | 2,942 | 1,415 | 83 | 1 | |
Cellulosilyticum | ||||||
cle | Cellulosilyticum lentocellum | 4,182 | 2,083 | 145 | 143 | |
cew | Cellulosilyticum sp. WCF-2 | 4,152 | 2,090 | 143 | 89 | |
Petrocella | ||||||
cbar | Petrocella atlantisensis | 3,423 | 1,715 | 113 | 56 | |
Vallitalea | ||||||
vgu | Vallitalea guaymasensis | 4,739 | 2,512 | 78 | 46 | |
vpy | Vallitalea pronyensis | 5,169 | 2,688 | 78 | 46 | |
Mogibacterium | ||||||
mdv | Mogibacterium diversum | 1,646 | 868 | 53 | 36 | |
mnl | Mogibacterium neglectum | 1,584 | 872 | 53 | ||
Aminipila | ||||||
amij | Aminipila luticellarii | 2,448 | 1,414 | 81 | 59 | |
amic | Aminipila terrae | 3,073 | 1,502 | 85 | 59 | |
abut | Aminipila butyrica | 3,019 | 1,626 | 87 | 56 | |
Emergencia | ||||||
etm | Emergencia timonensis | 4,094 | 1,833 | 62 | 44 | |
emj | Emergencia sp. JLR.KK010 | 2,837 | 1,351 | 68 | ||
Anoxybacterium | ||||||
ahad | Anoxybacterium hadale | 4,190 | 2,194 | 67 | ||
unclassified Anaerovoracaceae | ||||||
euu | Eubacterium sulci | 1,475 | 902 | 49 | 40 | |
Alkaliphilus | ||||||
amt | Alkaliphilus metalliredigens | 4,625 | 2,245 | 139 | 137 | |
aoe | Alkaliphilus oremlandii | 2,836 | 1,615 | 115 | 115 | |
Geosporobacter | ||||||
gfe | Geosporobacter ferrireducens | 5,249 | 2,771 | 162 | 136 | |
Caminicella | ||||||
cspo | Caminicella sporogenes | 2,338 | 1,311 | 137 | 13 | |
Paraclostridium | ||||||
pbif | Paraclostridium bifermentans | 3,353 | 1,663 | 154 | 96 | |
psor | Paraclostridium sordellii | 3,327 | 1,708 | 160 | 114 | |
Clostridioides | ||||||
cdf | Clostridioides difficile 630 | Ref | 3,809 | 1,855 | 32 | 32 |
pdc | Clostridioides difficile 630 | 3,770 | 1,931 | 130 | 127 | |
cdc | Clostridioides difficile CD196 | 3,451 | 1,950 | 111 | 109 | |
cdl | Clostridioides difficile R20291 | 3,508 | 1,966 | 27 | 24 | |
Clostridioides difficile 630Derm | 3,802 | 1,925 | 126 | 122 | ||
Romboutsia | ||||||
roc | Romboutsia sp. CE17 | 2,845 | 1,557 | 140 | 91 | |
ril | Romboutsia ilealis | 2,347 | 1,200 | 321 | ||
rhom | Romboutsia hominis | 2,852 | 1,461 | 196 | ||
Peptacetobacter | ||||||
phx | Peptacetobacter hiranonis | 2,239 | 1,205 | 124 | 86 | |
Terrisporobacter | ||||||
tem | Terrisporobacter hibernicus | 3,845 | 1,828 | 133 | 76 | |
tgc | Terrisporobacter glycolicus | 3,620 | 1,764 | 122 | 44 | |
tmy | Terrisporobacter mayombei | 3,915 | 1,846 | 209 | 3 | |
tpet | Terrisporobacter petrolearius | 3,969 | 1,886 | 134 | ||
Tepidibacter | ||||||
teb | Tepidibacter aestuarii | 3,552 | 1,808 | 259 | 94 | |
thyr | Tepidibacter hydrothermalis | 3,824 | 1,824 | 158 | 7 | |
Intestinibacter | ||||||
ibr | Intestinibacter bartlettii | 2,644 | 1,287 | 124 | 10 | |
Peptostreptococcus | ||||||
peb | Peptostreptococcus equinus | 1,908 | 873 | 81 | 4 | |
unclassified Peptostreptococcaceae | ||||||
pbq | Peptostreptococcaceae bacterium oral taxon 929 | 1,471 | 898 | 63 | 48 | |
Peptoclostridium | ||||||
eac | Peptoclostridium acidaminophilum | 2,910 | 1,604 | 89 | 89 | |
Acetoanaerobium | ||||||
cst | Acetoanaerobium sticklandii | 2,573 | 1,475 | 115 | 79 | |
Filifactor | ||||||
faa | Filifactor alocis | 1,641 | 917 | 59 | 59 | |
Christensenella | ||||||
cmiu | Christensenella minuta | 2,782 | 1,467 | 63 | 43 | |
Desulforudis | ||||||
dau | Candidatus Desulforudis audaxviator | 2,157 | 1,333 | 56 | 53 | |
Caldanaerobacter | ||||||
tte | Caldanaerobacter subterraneus subsp. tengcongensis | 2,588 | 1,538 | 68 | 68 | |
Thermoanaerobacter | ||||||
tex | Thermoanaerobacter sp. X514 | 2,349 | 1,509 | 73 | 65 | |
thx | Thermoanaerobacter sp. X513 | 2,331 | 1,505 | 73 | 71 | |
tpd | Thermoanaerobacter pseudethanolicus | 2,243 | 1,458 | 75 | 67 | |
tit | Thermoanaerobacter italicus | 2,270 | 1,471 | 71 | 69 | |
tmt | Thermoanaerobacter mathranii | 2,159 | 1,413 | 76 | 74 | |
tbo | Thermoanaerobacter brockii | 2,209 | 1,437 | 72 | 70 | |
twi | Thermoanaerobacter wiegelii | 2,522 | 1,585 | 74 | 72 | |
tki | Thermoanaerobacter kivui | 2,378 | 1,408 | 68 | 61 | |
thez | Thermoanaerobacter sp. RKWS2 | 2,666 | 1,413 | 74 | ||
Carboxydothermus | ||||||
chy | Carboxydothermus hydrogenoformans | 2,620 | 1,474 | 63 | 62 | |
Ammonifex | ||||||
adg | Ammonifex degensii | 2,080 | 1,239 | 58 | 56 | |
Thermacetogenium | ||||||
tpz | Thermacetogenium phaeum | 2,824 | 1,530 | 59 | 59 | |
Gelria | ||||||
gek | Gelria sp. Kuro-4 | 2,831 | 1,562 | 62 | 27 | |
Thermoanaerobacterium | ||||||
ttm | Thermoanaerobacterium thermosaccharolyticum DSM 571 | 2,601 | 1,520 | 74 | 72 | |
tto | Thermoanaerobacterium thermosaccharolyticum M0795 | 2,714 | 1,581 | 72 | 72 | |
txy | Thermoanaerobacterium xylanolyticum | 2,345 | 1,437 | 77 | 75 | |
tsh | Thermoanaerobacterium saccharolyticum | 2,783 | 1,591 | 70 | 70 | |
thed | Thermoanaerobacterium sp. RBIITD | 3,010 | 1,013 | 92 | ||
Aceticella | ||||||
aaut | Aceticella autotrophica | 2,093 | 1,209 | 72 | 1 | |
Mahella | ||||||
mas | Mahella australiensis | 2,870 | 1,615 | 59 | 58 | |
Moorella | ||||||
mta | Moorella thermoacetica ATCC 39073 | Ref | 2,463 | 1,424 | 60 | 57 |
mtho | Moorella thermoacetica DSM 521 | 2,553 | 1,507 | 56 | 40 | |
mthz | Moorella thermoacetica DSM 2955 | 2,624 | 1,515 | 56 | 54 | |
mhui | Moorella humiferrea | 2,562 | 673 | 59 | ||
Metallumcola | ||||||
dbc | Metallumcola ferriviriculae | 3,527 | 1,857 | 65 | 2 | |
Tepidanaerobacter | ||||||
tep | Tepidanaerobacter acetatoxydans Re1 | 2,524 | 1,534 | 62 | 61 | |
tae | Tepidanaerobacter acetatoxydans Re1 | 2,645 | 1,537 | 92 | 56 | |
Biomaibacter | ||||||
bacg | Biomaibacter acetigenes | 3,166 | 1,666 | 64 | ||
Thermosediminibacter | ||||||
toc | Thermosediminibacter oceani | 2,197 | 1,349 | 63 | 62 | |
Natranaerobius | ||||||
nth | Natranaerobius thermophilus | 2,906 | 1,629 | 67 | 66 | |
Natranaerofaba | ||||||
ncd | Natranaerofaba carboxydovora | 3,005 | 1,557 | 53 | 25 | |
Halothermothrix | ||||||
hor | Halothermothrix orenii | 2,342 | 1,473 | 70 | 70 | |
Halanaerobium | ||||||
has | Halanaerobium hydrogeniformans | 2,295 | 1,495 | 73 | 72 | |
hpk | Halanaerobium praevalens | 2,068 | 1,370 | 70 | 69 | |
Halocella | ||||||
hals | Halocella sp. SP3-1 | 3,729 | 2,208 | 75 | 61 | |
Iocasia | ||||||
ifn | Iocasia fonsfrigidae | 3,641 | 2,104 | 74 | 30 | |
Acetohalobium | ||||||
aar | Acetohalobium arabaticum | 2,282 | 1,497 | 85 | 84 | |
Halobacteroides | ||||||
hhl | Halobacteroides halobius | 2,468 | 1,532 | 90 | 89 | |
Anoxybacter | ||||||
aft | Anoxybacter fermentans | 3,035 | 1,617 | 113 | 79 | |
Koleobacter | ||||||
kme | Koleobacter methoxysyntrophicus | 2,952 | 1,673 | 68 | 49 | |
Improbicoccus | ||||||
ips | Candidatus Improbicoccus pseudotrichonymphae | 805 | 413 | 45 | ||
Paraimprobicoccus | ||||||
ptrh | Candidatus Paraimprobicoccus trichonymphae | 839 | 421 | 45 | ||
Helicovermis | ||||||
hprf | Helicovermis profundi | 2,786 | 1,487 | 74 | ||
Monoglobus | ||||||
mpec | Monoglobus pectinilyticus | 2,263 | 999 | 55 | 1 | |
other Bacillota | ||||||
Finegoldia | ||||||
fma | Finegoldia magna | 1,813 | 1,034 | 60 | 60 | |
Anaerococcus | ||||||
apr | Anaerococcus prevotii | 1,806 | 1,103 | 64 | 62 | |
avg | Anaerococcus vaginalis | 1,697 | 1,085 | 62 | 39 | |
aob | Anaerococcus obesiensis | 1,693 | 1,030 | 62 | 37 | |
Parvimonas | ||||||
pmic | Parvimonas micra | 1,419 | 862 | 57 | 46 | |
ppag | Parvimonas parva | 1392 | 52 | |||
Peptoniphilus | ||||||
ped | Peptoniphilus sp. ING2-D1G | 1,541 | 940 | 65 | 56 | |
phar | Peptoniphilus harei | 1,577 | 1,000 | 51 | 41 | |
pequ | Peptoniphilus equinus | 1,584 | 947 | 60 | 2 | |
amei | Peptoniphilus sp. GNH | 1,676 | 911 | 61 | 45 | |
pgk | Peptoniphilus genitalis | 1,768 | 996 | 55 | ||
Aedoeadaptatus | ||||||
piv | Aedoeadaptatus ivorii | 1,505 | 958 | 61 | 50 | |
Miniphocaeibacter | ||||||
mhap | Miniphocaeibacter halophilus | 2,287 | 1,347 | 60 | 34 | |
Helcococcus | ||||||
hov | Helcococcus ovis | 1,620 | 932 | 42 | ||
hku | Helcococcus kunzii | 1,786 | 994 | 36 | 1 | |
Gottschalkia | ||||||
cad | Gottschalkia acidurici | 2,842 | 1,600 | 101 | 101 | |
unclassified Gottschalkiaceae | ||||||
gbx | Gottschalkiaceae bacterium SANA | 3,275 | 1,697 | 96 | ||
Acidilutibacter | ||||||
spoa | Acidilutibacter cellobiosedens | 3,445 | 1,844 | 83 | 57 | |
Keratinibaculum | ||||||
kpar | Keratinibaculum paraultunense | 2,181 | 1,341 | 71 | 49 | |
Caloranaerobacter | ||||||
cazo | Caloranaerobacter azorensis | 2,381 | 1,316 | 98 | 75 | |
Tissierella | ||||||
tis | Tissierella sp. Yu-01 | 2,877 | 1,575 | 87 | 4 | |
tiz | Tissierella sp. MB52-C2 | 3,770 | 1,814 | 82 | ||
Sedimentibacter | ||||||
sedz | Sedimentibacter sp. zth1 | 2,779 | 1,407 | 128 | 75 | |
sedm | Sedimentibacter sp. MB35-C1 | 3,374 | 1,699 | 107 | ||
Ezakiella | ||||||
ecou | Ezakiella coagulans | 1,795 | 999 | 62 | 41 | |
Veillonella | ||||||
vpr | Veillonella parvula | 1,844 | 1,185 | 64 | 63 | |
vat | Veillonella atypica | 1,790 | 1,151 | 61 | 46 | |
vrm | Veillonella rodentium | 1,828 | 1,175 | 64 | 53 | |
vdn | Veillonella dispar | 1,935 | 1,187 | 61 | 50 | |
vnk | Veillonella nakazawae | 1,925 | 1,182 | 61 | 40 | |
vrg | Veillonella rogosae | 1,982 | 1,155 | 64 | 1 | |
vor | Veillonella orientalis | 1,884 | 1,144 | 61 | ||
Megasphaera | ||||||
med | Megasphaera elsdenii | 2,220 | 1,349 | 85 | 85 | |
mhw | Megasphaera hexanoica | 2,636 | 1,410 | 72 | 56 | |
meg | Megasphaera stantonii | 2,373 | 1,379 | 78 | 57 | |
mmax | Megasphaera massiliensis | 2,318 | 1,337 | 92 | 46 | |
Dialister | ||||||
dpn | Dialister pneumosintes | 1,164 | 783 | 73 | 50 | |
dho | Dialister hominis | 2,191 | 1,222 | 68 | 33 | |
Selenomonas | ||||||
ssg | Selenomonas sputigena | 2,255 | 1,371 | 68 | 67 | |
sri | Selenomonas ruminantium subsp. lactilytica | 3,512 | 1,732 | 97 | 96 | |
sele | Selenomonas sp. oral taxon 478 | 2,009 | 1,314 | 69 | 67 | |
selo | Selenomonas sp. oral taxon 136 | 2,218 | 1,381 | 74 | 63 | |
selt | Selenomonas sp. oral taxon 920 | 2,226 | 1,356 | 74 | 61 | |
sdia | Selenomonas dianae | 2,207 | 1,286 | 74 | 2 | |
stim | Selenomonas timonae | 2,140 | 1,316 | 73 | 1 | |
selm | Selenomonas sp. TAMA-11512 | 2,457 | 1,383 | 65 | ||
Megamonas | ||||||
mhg | Megamonas hypermegale | 2,118 | 973 | 55 | 54 | |
mfun | Megamonas funiformis | 2,440 | 1,449 | 75 | 54 | |
Selenobaculum | ||||||
sgbi | Selenobaculum gibii | 2,444 | 1,404 | 117 | 3 | |
Pelosinus | ||||||
puf | Pelosinus sp. UFO1 | 4,759 | 2,643 | 145 | 145 | |
pft | Pelosinus fermentans | 4,743 | 2,668 | 105 | 104 | |
Methylomusa | ||||||
mana | Methylomusa anaerophila | 4,183 | 2,107 | 85 | 71 | |
Sporomusa | ||||||
sted | Sporomusa termitida | 4,735 | 2,576 | 137 | 87 | |
ssph | Sporomusa sphaeroides | 4,592 | 2,410 | 145 | 1 | |
sova | Sporomusa ovata | 5,112 | 2,370 | 203 | 3 | |
ssid | Sporomusa silvacetica | 5,757 | 2,675 | 155 | 4 | |
sacv | Sporomusa acidovorans | 5,604 | 2,669 | 145 | 1 | |
Acidaminococcus | ||||||
afn | Acidaminococcus fermentans | 2,026 | 1,234 | 82 | 81 | |
ain | Acidaminococcus intestini | 2,404 | 1,261 | 61 | 61 | |
Phascolarctobacterium | ||||||
pfac | Phascolarctobacterium faecium | 2,306 | 1,326 | 72 | 55 | |
Erysipelothrix | ||||||
erh | Erysipelothrix rhusiopathiae Fujisawa | 1,697 | 1,016 | 76 | 76 | |
ers | Erysipelothrix rhusiopathiae SY1027 | 1,775 | 981 | 63 | 63 | |
erl | Erysipelothrix larvae | 2,271 | 1,263 | 49 | 37 | |
eri | Erysipelothrix piscisicarius | 1,352 | 852 | 66 | 57 | |
erd | Erysipelothrix sp. HDW6C | 2,192 | 1,220 | 68 | 48 | |
eio | Erysipelothrix inopinata | 2,039 | 1,175 | 63 | 45 | |
eeh | Erysipelothrix enhydrae | 1,608 | 953 | 77 | 2 | |
erv | Erysipelothrix sp. Poltava | 2,002 | 534 | 68 | ||
Faecalitalea | ||||||
euc | Faecalitalea cylindroides | 1,442 | 684 | 45 | 42 | |
Faecalibaculum | ||||||
fro | Faecalibaculum rodentium | 2,794 | 1,261 | 93 | 53 | |
Amedibacterium | ||||||
aarg | Amedibacterium intestinale JCM 30884 | 2,968 | 1,406 | 85 | 58 | |
absi | Amedibacterium intestinale 9CBEGH2 | 2,414 | 1,292 | 85 | 58 | |
Bulleidia | ||||||
bull | Bulleidia sp. zg-1006 | 1,496 | 855 | 50 | 22 | |
Intestinibaculum | ||||||
ebm | Intestinibaculum porci | 3,004 | 1,382 | 99 | 60 | |
Longicatena | ||||||
lcg | Longicatena caecimuris | 2,866 | 1,490 | 60 | 29 | |
Allobaculum | ||||||
amuo | Allobaculum mucilyticum | 2,465 | 1,049 | 107 | 42 | |
allo | Allobaculum sp. Allo2 | 2,479 | 603 | 93 | 43 | |
Solobacterium | ||||||
smoe | Solobacterium moorei | 2,599 | 1,125 | 50 | ||
Allocoprobacillus | ||||||
ahq | Allocoprobacillus halotolerans | 3,150 | 1,138 | 70 | 3 | |
Amedibacillus | ||||||
ehn | Eubacterium hominis | 3,757 | 1,163 | 56 | 4 | |
unclassified Erysipelotrichaceae | ||||||
erb | Erysipelotrichaceae bacterium I46 | 4,138 | 2,004 | 71 | 61 | |
Turicibacter | ||||||
tur | Turicibacter sp. H121 | 2,216 | 1,246 | 176 | 144 | |
tsg | Turicibacter sanguinis | 2,709 | 1,530 | 150 | 121 | |
tbb | Turicibacter bilis | 2,468 | 1,258 | 173 | 112 | |
tfc | Turicibacter faecis | 2,186 | 1,143 | 213 | ||
tuk | Turicibacter sp. KK003 | 2,206 | 1,184 | 229 | ||
Faecalibacillus | ||||||
fit | Faecalibacillus intestinalis | 2,948 | 1,410 | 94 | 59 | |
Thomasclavelia | ||||||
erm | Thomasclavelia ramosa | 2,968 | 1,639 | 83 | 55 | |
tsf | Thomasclavelia spiroformis | 2,291 | 1,193 | 82 | 3 | |
Catenibacterium | ||||||
cmit | Catenibacterium mitsuokai | 2,595 | 937 | 107 | 27 | |
Limnochorda | ||||||
lpil | Limnochorda pilosa | 3,601 | 2,026 | 53 | 50 | |
Geochorda | ||||||
gsc | Geochorda subterranea | 2,791 | 95 | 59 | 1 | |
Carboxydichorda | ||||||
csub | Carboxydichorda subterranea | 2,986 | 114 | 59 | ||
Contubernalis | ||||||
calk | Candidatus Contubernalis alkalaceticus | 3,383 | 1,628 | 68 | 24 | |
Fermentithermobacillus | ||||||
fcz | Candidatus Fermentithermobacillus carboniphilus | 2,147 | 1,166 | 56 | 1 | |
Caldicellulosiruptor | ||||||
csc | Caldicellulosiruptor saccharolyticus | 2,682 | 1,558 | 58 | 58 | |
ate | Caldicellulosiruptor bescii | 2,666 | 1,452 | 60 | 58 | |
cob | Caldicellulosiruptor obsidiansis | 2,188 | 1,368 | 59 | 58 | |
chd | Caldicellulosiruptor hydrothermalis | 2,546 | 1,537 | 61 | 59 | |
cow | Caldicellulosiruptor owensensis | 2,147 | 1,326 | 59 | 58 | |
cki | Caldicellulosiruptor acetigenus I77R1B | 2,482 | 1,430 | 60 | 59 | |
clc | Caldicellulosiruptor acetigenus 6A | 2,318 | 1,347 | 58 | 57 | |
ckn | Caldicellulosiruptor kronotskyensis | 2,466 | 1,511 | 60 | 58 | |
ccha | Caldicellulosiruptor changbaiensis | 2,532 | 1,499 | 59 | 50 | |
cdia | Caldicellulosiruptor diazotrophicus | 2,444 | 1,451 | 57 | 48 | |
cnag | Caldicellulosiruptor naganoensis | 2,284 | 1,148 | 59 | 2 | |
cmor | Caldicellulosiruptor morganii | 2,275 | 1,147 | 59 | 3 | |
Anaerocellum | ||||||
cdan | Anaerocellum danielii | 2,623 | 1,426 | 59 | 1 | |
unclassified Bacillota | ||||||
ett | Endosymbiont 'TC1' of Trimyema compressum | 1,710 | 721 | 45 | 30 | |
fbs | Firmicutes bacterium ASF500 | 3,530 | 1,334 | 59 | 1 | |
Mycoplasmatota | ||||||
Mycoplasma | ||||||
mmy | Mycoplasma mycoides subsp. mycoides SC PG1 | 1,016 | 524 | 36 | 36 | |
mmym | Mycoplasma mycoides subsp. mycoides SC Gladysdale | 1,095 | 555 | 40 | 39 | |
mmyi | Mycoplasma mycoides subsp. mycoides izsam_mm5713 | 1,078 | 559 | 36 | 35 | |
mml | Mycoplasma mycoides subsp. capri LC 95010 | 924 | 543 | 38 | 38 | |
mcp | Mycoplasma capricolum subsp. capricolum ATCC 27343 | 812 | 478 | 42 | 39 | |
mcac | Mycoplasma capricolum subsp. capripneumoniae 9231-Abomsa | 670 | 442 | 43 | 38 | |
mcap | Mycoplasma capricolum subsp. capripneumoniae F38 | 999 | 495 | 31 | 31 | |
mcar | Mycoplasma capricolum subsp. capripneumoniae ILRI181 | 998 | 493 | 31 | 31 | |
mcai | Mycoplasma capricolum subsp. capripneumoniae 87001 | 898 | 495 | 36 | 36 | |
mlc | Mycoplasma leachii PG50 | 882 | 507 | 41 | 39 | |
mlh | Mycoplasma leachii 99/014/6 | 905 | 506 | 35 | 34 | |
mfer | Mycoplasma feriruminatoris | 879 | 521 | 37 | 9 | |
mcd | Mycoplasma crocodyli | 689 | 438 | 43 | 43 | |
mha | Mycoplasma haemofelis Langford 1 | 1,545 | 276 | 34 | 34 | |
mhf | Mycoplasma haemofelis Ohio2 | 1,524 | 273 | 34 | 34 | |
mss | Mycoplasma suis Illinois | 844 | 241 | 35 | 35 | |
msk | Mycoplasma suis KI3806 | 799 | 238 | 35 | 32 | |
mpf | Mycoplasma putrefaciens KS1 | 650 | 429 | 39 | 39 | |
mput | Mycoplasma putrefaciens Mput9231 | 667 | 432 | 38 | 38 | |
mhe | Mycoplasma haemocanis | 1,175 | 271 | 34 | 34 | |
mwe | Mycoplasma wenyonii | 652 | 254 | 35 | 35 | |
mhl | Candidatus Mycoplasma haematolamae | 925 | 239 | 36 | 36 | |
mhb | Candidatus Mycoplasma haematominutum | 547 | 224 | 35 | 35 | |
mpv | Mycoplasma parvum | 581 | 242 | 34 | 34 | |
mov | Mycoplasma ovis | 840 | 229 | 35 | 35 | |
myt | Mycoplasma yeatsii | 728 | 446 | 39 | 39 | |
myg | Mycoplasma sp. (ex Biomphalaria glabrata) | 555 | 366 | 29 | 29 | |
mans | Mycoplasma anserisalpingitidis | 762 | 466 | 40 | 35 | |
mnh | Mycoplasma nasistruthionis | 587 | 357 | 42 | 28 | |
mstr | Mycoplasma struthionis | 612 | 361 | 46 | 6 | |
mamp | Mycoplasma amphoriforme | 715 | 415 | |||
mtuy | Mycoplasma tullyi | 637 | 422 | 40 | 8 | |
mtau | Mycoplasma tauri | 624 | 377 | 41 | 7 | |
mmir | Mycoplasma miroungigenitalium | 659 | 384 | 42 | 4 | |
mmio | Mycoplasma miroungirhinis | 606 | 387 | 41 | 5 | |
mphe | Mycoplasma phocoenae | 571 | 380 | 40 | 3 | |
mphn | Mycoplasma phocoeninasale | 599 | 349 | 43 | 3 | |
mcot | Mycoplasma cottewii | 836 | 429 | 39 | 7 | |
migu | Mycoplasma iguanae | 588 | 235 | 36 | 1 | |
mses | Mycoplasma seminis | 851 | 391 | 43 | ||
mbra | Mycoplasma bradburyae | 725 | 394 | 40 | ||
mmah | Candidatus Mycoplasma mahonii | 678 | 402 | 37 | ||
Hepatoplasma | ||||||
hcr | Candidatus Hepatoplasma crinochetorum | 582 | 358 | 33 | 33 | |
hvu | Candidatus Hepatoplasma vulgare | 595 | 327 | 30 | 1 | |
hsg | Candidatus Hepatoplasma scabrum | 543 | 346 | 32 | 1 | |
Tyloplasma | ||||||
tll | Candidatus Tyloplasma litorale | 530 | 341 | 32 | ||
Phytoplasma | ||||||
poy | Onion yellows phytoplasma OY-M | 752 | 416 | 39 | 39 | |
ayw | Aster yellows witches'-broom phytoplasma AYWB | 693 | 362 | 35 | 35 | |
mbp | Maize bushy stunt phytoplasma | 485 | 326 | 38 | 36 | |
pwp | Paulownia witches'-broom phytoplasma | 749 | 365 | 41 | 1 | |
rphy | Rapeseed phyllody phytoplasma | 753 | 361 | 38 | ||
pase | Candidatus Phytoplasma asteris | 749 | 376 | 41 | ||
pml | Candidatus Phytoplasma mali | 482 | 318 | 39 | 39 | |
pal | Candidatus Phytoplasma australiense | 684 | 363 | 43 | 38 | |
nzs | Strawberry lethal yellows phytoplasma (CPA) | 1,100 | 427 | 41 | 41 | |
psol | Candidatus Phytoplasma solani | 520 | 331 | 27 | 27 | |
pzi | Candidatus Phytoplasma ziziphi | 640 | 338 | 40 | 31 | |
pvh | Candidatus Phytoplasma vitis | 498 | 291 | 40 | 6 | |
prub | Candidatus Phytoplasma rubi | 685 | 309 | 40 | ||
pluf | Candidatus Phytoplasma luffae | 725 | 391 | 37 | 7 | |
poe | Candidatus Phytoplasma oryzae | 424 | 273 | 31 | ||
psah | Candidatus Phytoplasma sacchari | 474 | 292 | 34 | ||
pphy | Candidatus Phytoplasma asiaticum | 474 | 283 | 36 | ||
pphs | Candidatus Phytoplasma australasiaticum subsp. australasiaticum | 468 | 278 | 34 | ||
pfra | Candidatus Phytoplasma fraxini | 512 | 295 | 40 | ||
Acholeplasma | ||||||
acl | Acholeplasma laidlawii | 1,380 | 818 | 42 | 41 | |
aoc | Acholeplasma oculi | 1,471 | 839 | 40 | 40 | |
ahk | Acholeplasma hippikon | 1,359 | 824 | 46 | 40 | |
Paracholeplasma | ||||||
abra | Paracholeplasma brassicae | 1,690 | 989 | 59 | 58 | |
Alteracholeplasma | ||||||
apal | Alteracholeplasma palmae | 1,439 | 834 | 41 | 41 | |
Haploplasma | ||||||
aaxa | Haploplasma axanthum | 1,710 | 912 | 45 | 44 | |
Mariniplasma | ||||||
manr | Mariniplasma anaerobium | 1,779 | 964 | 42 | 18 | |
Mesoplasma | ||||||
mfl | Mesoplasma florum L1 | 683 | 462 | 29 | 29 | |
mfw | Mesoplasma florum W37 | 733 | 473 | 35 | 35 | |
mchc | Mesoplasma chauliocola | 718 | 474 | 38 | 38 | |
mlac | Mesoplasma lactucae | 689 | 426 | 44 | 43 | |
ment | Mesoplasma entomophilum | 704 | 455 | 38 | 38 | |
msyr | Mesoplasma syrphidae | 740 | 480 | 38 | 38 | |
mtab | Mesoplasma tabanidae | 722 | 482 | 35 | 35 | |
mcol | Mesoplasma coleopterae | 691 | 452 | 35 | 35 | |
eml | Mesoplasma melaleucae | 789 | 422 | 35 | 35 | |
Entomoplasma | ||||||
efr | Entomoplasma freundtii | 702 | 477 | 39 | 39 | |
Williamsoniiplasma | ||||||
elj | Williamsoniiplasma luminosum | 868 | 501 | 35 | 35 | |
esx | Williamsoniiplasma somnilux | 725 | 481 | 35 | 35 | |
Spiroplasma | ||||||
scr | Spiroplasma chrysopicola | 1,009 | 557 | 36 | 36 | |
ssyr | Spiroplasma syrphidicola | 1,006 | 551 | 35 | 35 | |
sdi | Spiroplasma diminutum | 858 | 511 | 32 | 32 | |
stai | Spiroplasma taiwanense | 989 | 503 | 32 | 32 | |
sapi | Spiroplasma apis | 997 | 562 | 32 | 32 | |
smir | Spiroplasma mirum ATCC 29335 | 1,091 | 476 | 36 | 36 | |
smia | Spiroplasma mirum ATCC 29335 SMCA | 1,384 | 486 | 36 | 36 | |
satr | Spiroplasma mirum GNAT3597 | 996 | 464 | 36 | 36 | |
scq | Spiroplasma culicicola | 1,071 | 574 | 32 | 32 | |
ssab | Spiroplasma sabaudiense | 924 | 526 | 36 | 36 | |
seri | Spiroplasma eriocheiris | 1,180 | 592 | 35 | 35 | |
stur | Spiroplasma turonicum | 1,086 | 592 | 32 | 32 | |
sll | Spiroplasma litorale | 1,064 | 593 | 32 | 32 | |
skn | Spiroplasma kunkelii | 1,685 | 466 | 36 | 35 | |
scj | Spiroplasma cantharicola | 1,017 | 574 | 32 | 32 | |
shj | Spiroplasma helicoides | 1,151 | 603 | 32 | 32 | |
sck | Spiroplasma citri | 1,933 | 515 | 35 | 35 | |
sfz | Spiroplasma floricola | 1,122 | 569 | 32 | 32 | |
scou | Spiroplasma corruscae | 1,039 | 590 | 32 | 32 | |
scla | Spiroplasma clarkii | 1,480 | 495 | 35 | 35 | |
sprn | Spiroplasma sp. NBRC 100390 | 1,036 | 561 | 35 | 35 | |
spit | Spiroplasma sp. TU-14 | 1,036 | 561 | 35 | 35 | |
stab | Spiroplasma tabanidicola | 1,103 | 584 | 32 | 32 | |
sphh | Spiroplasma phoeniceum | 2,302 | 513 | 46 | 41 | |
smoo | Spiroplasma monobiae | 813 | 492 | 32 | 32 | |
salx | Spiroplasma alleghenense | 1,146 | 606 | 36 | 36 | |
sgq | Spiroplasma gladiatoris | 1,024 | 583 | 33 | 33 | |
schi | Spiroplasma chinense | 1,222 | 637 | 35 | 32 | |
smei | Spiroplasma melliferum | 1,363 | 549 | 35 | 17 | |
splt | Spiroplasma platyhelix | 674 | 405 | 30 | 2 | |
sixo | Spiroplasma ixodetis | 2,886 | 268 | 34 | 2 | |
spou | Spiroplasma poulsonii | 1,654 | 468 | 36 | ||
Mesomycoplasma | ||||||
mmo | Mycoplasma mobile | 635 | 410 | 34 | 34 | |
mhy | Mesomycoplasma hyopneumoniae 232 | 691 | 390 | 36 | 36 | |
mhj | Mesomycoplasma hyopneumoniae J | 674 | 389 | 33 | 32 | |
mhp | Mesomycoplasma hyopneumoniae 7448 | 698 | 389 | 33 | 33 | |
mhn | Mesomycoplasma hyopneumoniae 168 | 695 | 387 | 33 | 33 | |
mhyl | Mesomycoplasma hyopneumoniae 168-L | 683 | 384 | 33 | 33 | |
mhyo | Mesomycoplasma hyopneumoniae 7422 | 677 | 389 | 34 | 34 | |
mco | Mesomycoplasma conjunctivae | 696 | 379 | 35 | 34 | |
mhr | Mesomycoplasma hyorhinis HUB-1 | 658 | 425 | 33 | 33 | |
mhh | Mesomycoplasma hyorhinis GDL-1 | 647 | 394 | 33 | 33 | |
mhm | Mesomycoplasma hyorhinis MCLD | 778 | 428 | 33 | 33 | |
mhs | Mesomycoplasma hyorhinis SK76 | 753 | 429 | 33 | 33 | |
mhv | Mesomycoplasma hyorhinis DBS 1050 | 737 | 431 | 33 | 33 | |
mbc | Mesomycoplasma bovoculi | 579 | 368 | 35 | 35 | |
mfq | Mesomycoplasma flocculare | 563 | 368 | 35 | 35 | |
mds | Mesomycoplasma dispar | 718 | 397 | 35 | 33 | |
mnu | Mesomycoplasma neurolyticum | 872 | 491 | 35 | 4 | |
moe | Mesomycoplasma ovipneumoniae | 826 | 392 | 33 | ||
mmol | Mesomycoplasma molare | 748 | 242 | 40 | 1 | |
mlag | Mesomycoplasma lagogenitalium | 821 | 394 | 40 | ||
mmoa | Mesomycoplasma moatsii | 639 | 381 | 34 | ||
Mycoplasmopsis | ||||||
mcr | Mycoplasmopsis californica ST-6 | 611 | 386 | 37 | 37 | |
mcm | Mycoplasmopsis californica HAZ160_1 | 575 | 369 | 37 | 37 | |
mgb | Mycoplasmopsis gallinacea | 571 | 342 | 22 | 22 | |
mgly | Mycoplasmopsis glycophila | 700 | 399 | 43 | 31 | |
mcou | Mycoplasmopsis columboralis | 758 | 436 | 38 | 29 | |
mcom | Mycoplasmopsis columbina | 602 | 393 | 40 | 28 | |
mpu | Mycoplasmopsis pulmonis | 782 | 458 | 32 | 32 | |
msy | Mycoplasmopsis synoviae 53 | 681 | 411 | 41 | 41 | |
mso | Mycoplasmopsis synoviae ATCC 25204 | 664 | 417 | 41 | 40 | |
maa | Mycoplasmopsis agalactiae PG2 | 751 | 414 | 42 | 42 | |
mal | Mycoplasmopsis agalactiae 5632 | 820 | 445 | 42 | 42 | |
mfr | Mycoplasmopsis fermentans JER | 797 | 482 | 41 | 41 | |
mfm | Mycoplasmopsis fermentans M64 | 1,050 | 505 | 41 | 41 | |
mfp | Mycoplasmopsis fermentans PG18 | 893 | 500 | |||
mbv | Mycoplasmopsis bovis PG45 | 765 | 443 | 42 | 42 | |
mbh | Mycoplasmopsis bovis Hubei-1 | 801 | 451 | 38 | 38 | |
mbi | Mycoplasmopsis bovis HB0801 | 762 | 448 | 40 | 40 | |
mbq | Mycoplasmopsis bovis CQ-W70 | 778 | 455 | 38 | 38 | |
mcy | Mycoplasmopsis cynos | 883 | 448 | 8 | 7 | |
mcas | Mycoplasmopsis canis LV | 680 | 408 | 39 | 39 | |
mck | Mycoplasmopsis canis PG 14 | 639 | 405 | 42 | 42 | |
marg | Mycoplasmopsis arginini | 518 | 350 | 39 | 39 | |
mpul | Mycoplasmopsis pullorum | 763 | 445 | 41 | 41 | |
mbov | Mycoplasmopsis bovigenitalium | 623 | 369 | 37 | 37 | |
mboh | Mycoplasmopsis bovirhinis | 645 | 393 | 42 | 41 | |
mani | Mycoplasmopsis anatis | 776 | 478 | 41 | 41 | |
mphi | Mycoplasmopsis phocirhinis | 676 | 402 | 41 | 4 | |
mfel | Mycoplasmopsis felis | 734 | 420 | 40 | 3 | |
medw | Mycoplasmopsis edwardii | 1,364 | 365 | 38 | 3 | |
mgal | Mycoplasmopsis gallopavonis | 805 | 501 | 42 | 5 | |
mcit | Mycoplasmopsis citelli | 920 | 452 | 43 | 4 | |
mmau | Mycoplasmopsis maculosa | 750 | 411 | 39 | 5 | |
mmel | Mycoplasmopsis meleagridis | 519 | 360 | 40 | 3 | |
mcob | Mycoplasmopsis columbinasalis | 621 | 395 | 41 | 5 | |
mcav | Mycoplasmopsis caviae | 1,069 | 339 | 45 | 2 | |
meqi | Mycoplasmopsis equigenitalium | 670 | 227 | 39 | 3 | |
mver | Mycoplasmopsis verecunda | 685 | 367 | 42 | ||
Metamycoplasma | ||||||
mat | Metamycoplasma arthritidis | 631 | 361 | 36 | 36 | |
mho | Metamycoplasma hominis ATCC 23114 | 536 | 358 | 40 | 40 | |
mhom | Metamycoplasma hominis ATCC 27545 | 563 | 362 | 41 | 41 | |
mcan | Metamycoplasma canadense | 484 | 326 | 38 | 38 | |
mpho | Mycoplasma phocae | 608 | 356 | 43 | 43 | |
mhyv | Metamycoplasma hyosynoviae | 584 | 336 | 36 | 36 | |
mclo | Metamycoplasma cloacale | 539 | 358 | 38 | 30 | |
mphc | Metamycoplasma phocicerebrale | 604 | 385 | 42 | 31 | |
mane | Mycoplasma anseris | 611 | 362 | 41 | 31 | |
mala | Metamycoplasma alkalescens | 1,310 | 366 | 40 | 4 | |
msai | Metamycoplasma salivarium | 617 | 377 | 37 | 7 | |
mob | Metamycoplasma orale | 683 | 399 | 39 | ||
meqr | Metamycoplasma equirhinis | 594 | 338 | 41 | ||
msud | Metamycoplasma subdolum | 538 | 336 | 40 | ||
mfau | Metamycoplasma faucium | 683 | 355 | 39 | ||
Ureaplasma | ||||||
uur | Ureaplasma parvum serovar 3 ATCC 700970 | 611 | 385 | 39 | 39 | |
upa | Ureaplasma parvum serovar 3 ATCC 27815 | 609 | 387 | 32 | 30 | |
upr | Ureaplasma parvum serovar 3 SV3F4 | 571 | 377 | 36 | 35 | |
uue | Ureaplasma urealyticum | 646 | 390 | 35 | 33 | |
ude | Ureaplasma diversum | 641 | 318 | 28 | ||
Mycoplasmoides | ||||||
mge | Mycoplasmoides genitalium G37 | Ref | 476 | 341 | 43 | 42 |
mgu | Mycoplasmoides genitalium M2288 | 506 | 340 | 39 | 39 | |
mgc | Mycoplasmoides genitalium M2321 | 499 | 330 | 39 | 39 | |
mgq | Mycoplasmoides genitalium M6282 | 484 | 321 | 39 | 39 | |
mgx | Mycoplasmoides genitalium M6320 | 509 | 334 | 39 | 39 | |
mpn | Mycoplasmoides pneumoniae M129 | Ref | 688 | 363 | 44 | 37 |
mpm | Mycoplasmoides pneumoniae 309 | 707 | 373 | 43 | 42 | |
mpj | Mycoplasmoides pneumoniae FH | 629 | 343 | 42 | 42 | |
mpb | Mycoplasmoides pneumoniae M129-B7 | 707 | 369 | 40 | 40 | |
mga | Mycoplasmoides gallisepticum R(low) | 763 | 430 | 40 | 40 | |
mgh | Mycoplasmoides gallisepticum R(high) | 766 | 428 | 40 | 40 | |
mgf | Mycoplasmoides gallisepticum F | 756 | 444 | 40 | 40 | |
mgn | Mycoplasmoides gallisepticum NC06_2006.080-5-2P | 744 | 421 | 38 | 38 | |
mgs | Mycoplasmoides gallisepticum NC95_13295-2-2P | 754 | 425 | 38 | 38 | |
mgt | Mycoplasmoides gallisepticum NY01_2001.047-5-1P | 760 | 425 | 38 | 38 | |
mgv | Mycoplasmoides gallisepticum VA94_7994-1-7P | 767 | 424 | 38 | 38 | |
mgw | Mycoplasmoides gallisepticum WI01_2001.043-13-2P | 746 | 425 | 38 | 38 | |
mgac | Mycoplasmoides gallisepticum CA06_2006.052-5-2P | 763 | 425 | 38 | 38 | |
mgan | Mycoplasmoides gallisepticum NC08_2008.031-4-3P | 739 | 421 | 38 | 38 | |
mgnc | Mycoplasmoides gallisepticum NC96_1596-4-2P | 771 | 426 | 38 | 38 | |
mgz | Mycoplasmoides gallisepticum S6 | 816 | 444 | 58 | 40 | |
mfd | Mycoplasmoides fastidiosum | 833 | 191 | 37 | 1 | |
mcag | Mycoplasma cavipharyngis | 768 | 385 | 38 | ||
Malacoplasma | ||||||
mpe | Malacoplasma penetrans | 1,037 | 530 | 33 | 31 | |
miw | Malacoplasma iowae | 1,038 | 594 | 35 | 26 | |
mgj | Candidatus Malacoplasma girerdii | 572 | 372 | 34 | 34 | |
Xianfuyuplasma | ||||||
xcl | Candidatus Xianfuyuplasma coldseepsis | 1,862 | 736 | 48 | 12 | |
Hujiaoplasma | ||||||
tbk | Hujiaoplasma nucleasis | 1,682 | 915 | 45 | 17 | |
unclassified Izimaplasma | ||||||
mbj | Candidatus Izimaplasma bacterium HR1 | 1,815 | 968 | 42 | 36 | |
unclassified Tenericutes | ||||||
tbm | Tenericutes bacterium MO-XQ | 2,092 | 1,172 | 47 | 46 | |
tbz | Tenericutes bacterium MZ-XQ | 2,047 | 1,129 | 43 | 42 | |
Actinomycetota | ||||||
Fannyhessea | ||||||
fvg | Fannyhessea vaginae | 1,142 | 807 | 54 | 54 | |
Lancefieldella | ||||||
apv | Lancefieldella parvula | 1,353 | 860 | 53 | 52 | |
Olsenella | ||||||
ols | Olsenella uli | 1,739 | 1,073 | 55 | 54 | |
olo | Olsenella sp. oral taxon 807 | 2,381 | 1,168 | 54 | 51 | |
Parolsenella | ||||||
pcat | Parolsenella catena | 1,585 | 971 | 66 | 47 | |
Atopobium | ||||||
atb | Atopobium sp. oral taxon 416 | 3,033 | 1,327 | 64 | 34 | |
Thermophilibacter | ||||||
tio | Thermophilibacter immobilis | 1,881 | 1,177 | 60 | 38 | |
Leptogranulimonas | ||||||
lcal | Leptogranulimonas caecicola | 1,719 | 600 | 60 | 2 | |
Coriobacterium | ||||||
cgo | Coriobacterium glomerans | 1,768 | 1,109 | 54 | 53 | |
Collinsella | ||||||
caer | Collinsella aerofaciens | 1,896 | 1,138 | 75 | 55 | |
cstc | Collinsella stercoris | 2,013 | 1,104 | 64 | 52 | |
coll | Collinsella sp. zg1085 | 1,371 | 874 | 55 | ||
Cryptobacterium | ||||||
ccu | Cryptobacterium curtum | 1,357 | 870 | 58 | 58 | |
Slackia | ||||||
shi | Slackia heliotrinireducens | 2,765 | 1,305 | 56 | 56 | |
Eggerthella | ||||||
ele | Eggerthella lenta | 3,070 | 1,485 | 61 | 60 | |
eyy | Eggerthella sp. YY7918 | 2,680 | 1,248 | 50 | 50 | |
egd | Eggerthella guodeyinii | 3,446 | 1,548 | 61 | 50 | |
Gordonibacter | ||||||
gpa | Gordonibacter pamelaeae | 2,027 | 851 | 50 | 50 | |
Adlercreutzia | ||||||
aeq | Adlercreutzia equolifaciens | 2,281 | 1,165 | 54 | 54 | |
ahat | Adlercreutzia hattorii | 2,452 | 1,191 | 60 | 50 | |
Denitrobacterium | ||||||
ddt | Denitrobacterium detoxificans | 1,762 | 989 | 60 | 49 | |
Berryella | ||||||
cbac | Berryella intestinalis | 1,408 | 927 | 55 | 50 | |
bwa | Berryella wangjianweii | 1,403 | 899 | 55 | ||
Raoultibacter | ||||||
rts | Raoultibacter timonensis | 3,295 | 1,297 | 55 | 40 | |
Xiamenia | ||||||
ebz | Xiamenia xianingshaonis | 1,635 | 597 | 59 | 46 | |
Egibacter | ||||||
erz | Egibacter rhizosphaerae | 4,061 | 1,939 | 52 | 32 | |
Euzebya | ||||||
euz | Euzebya pacifica | 5,647 | 2,163 | 82 | 30 | |
Mycobacterium | ||||||
mtu | Mycobacterium tuberculosis H37Rv | Ref | 3,906 | 1,930 | 70 | 51 |
mtv | Mycobacterium tuberculosis H37Rv | 4,036 | 1,996 | 48 | 48 | |
mtc | Mycobacterium tuberculosis CDC1551 | Ref | 4,189 | 1,923 | ||
mra | Mycobacterium tuberculosis H37Ra | 4,034 | 1,993 | 50 | 50 | |
mtf | Mycobacterium tuberculosis F11 | 3,941 | 1,976 | 48 | 48 | |
mtb | Mycobacterium tuberculosis KZN 1435 | 4,060 | 1,984 | 48 | 48 | |
mtk | Mycobacterium tuberculosis KZN 4207 | 3,996 | 1,977 | 48 | 48 | |
mtz | Mycobacterium tuberculosis KZN 605 | 4,002 | 1,974 | 48 | 48 | |
mtg | Mycobacterium tuberculosis RGTB327 | 3,691 | 1,650 | 48 | 48 | |
mti | Mycobacterium tuberculosis RGTB423 | 3,622 | 1,588 | 48 | 47 | |
mte | Mycobacterium tuberculosis CCDC5079 | 3,647 | 1,858 | 48 | 48 | |
mtur | Mycobacterium tuberculosis CCDC5079 | 4,156 | 1,996 | 48 | 48 | |
mtl | Mycobacterium tuberculosis CCDC5180 | 3,591 | 1,856 | 48 | 48 | |
mto | Mycobacterium tuberculosis CTRI-2 | 3,946 | 1,971 | 48 | 48 | |
mtd | Mycobacterium tuberculosis UT205 | 3,796 | 1,917 | 48 | 48 | |
mtn | Mycobacterium tuberculosis Erdman = ATCC 35801 | 4,246 | 1,957 | 56 | 49 | |
mtj | Mycobacterium tuberculosis Beijing/NITR203 | 4,110 | 1,973 | 48 | 48 | |
mtub | Mycobacterium tuberculosis 7199-99 | 3,994 | 1,974 | 48 | 48 | |
mtuc | Mycobacterium tuberculosis CAS/NITR204 | 3,960 | 1,539 | 48 | 47 | |
mtue | Mycobacterium tuberculosis EAI5/NITR206 | 4,019 | 1,913 | 48 | 47 | |
mtx | Mycobacterium tuberculosis EAI5 | 3,902 | 1,909 | 48 | 48 | |
mtuh | Mycobacterium tuberculosis Haarlem/NITR202 | 3,681 | 1,414 | 49 | 48 | |
mtul | Mycobacterium tuberculosis Haarlem | 4,036 | 1,972 | 48 | 48 | |
mtut | Mycobacterium tuberculosis BT1 | 4,139 | 1,985 | 48 | 48 | |
mtuu | Mycobacterium tuberculosis BT2 | 4,149 | 1,995 | 48 | 48 | |
mtq | Mycobacterium tuberculosis HKBS1 | 4,151 | 1,991 | 48 | 48 | |
mbo | Mycobacterium tuberculosis variant bovis AF2122/97 | 3,988 | 1,948 | 50 | 48 | |
mbb | Mycobacterium tuberculosis variant bovis BCG Pasteur 1173P2 | 3,953 | 1,962 | 52 | 52 | |
mbt | Mycobacterium tuberculosis variant bovis BCG Tokyo 172 | 3,950 | 1,950 | 50 | 50 | |
mbm | Mycobacterium tuberculosis variant bovis BCG Mexico | 3,952 | 1,944 | 50 | 50 | |
mbk | Mycobacterium tuberculosis variant bovis BCG Korea 1168P | 4,139 | 1,971 | 50 | 50 | |
mbx | Mycobacterium tuberculosis variant bovis BCG ATCC 35743 | 4,035 | 1,828 | 48 | 48 | |
maf | Mycobacterium tuberculosis variant africanum | 3,830 | 1,907 | 50 | 49 | |
mmic | Mycobacterium tuberculosis variant microti | 4,321 | 1,954 | 48 | 48 | |
mce | Mycobacterium canettii CIPT 140010059 | 3,861 | 1,943 | 48 | 46 | |
mcq | Mycobacterium canettii CIPT 140060008 | 3,981 | 1,957 | 59 | 51 | |
mcv | Mycobacterium canettii CIPT 140070008 | 3,986 | 1,959 | 60 | 51 | |
mcx | Mycobacterium canettii CIPT 140070010 | 3,941 | 1,938 | 62 | 52 | |
mcz | Mycobacterium canettii CIPT 140070017 | 4,009 | 1,952 | 62 | 51 | |
mory | Mycobacterium orygis | 3,789 | 1,901 | 51 | 1 | |
mle | Mycobacterium leprae TN | Ref | 1,605 | 996 | 50 | 50 |
mlb | Mycobacterium leprae Br4923 | 1,604 | 998 | 47 | 47 | |
mpa | Mycobacterium avium subsp. paratuberculosis K-10 | 4,350 | 2,023 | |||
mao | Mycobacterium avium subsp. paratuberculosis MAP4 | 4,326 | 1,996 | 49 | 49 | |
mavi | Mycobacterium avium subsp. paratuberculosis E1 | 4,140 | 1,896 | 50 | 50 | |
mavu | Mycobacterium avium subsp. paratuberculosis E93 | 4,225 | 1,936 | 50 | 50 | |
mav | Mycobacterium avium 104 | 5,120 | 2,165 | 50 | 50 | |
mavm | Mycobacterium avium subsp. avium | 4,529 | 2,008 | 74 | ||
mit | Mycobacterium intracellulare MOTT-02 | 5,149 | 2,171 | 49 | 49 | |
mia | Mycobacterium intracellulare ATCC 13950 | 5,144 | 2,160 | 49 | 49 | |
mid | Mycobacterium intracellulare subsp. intracellulare | 5,254 | 2,199 | 48 | 46 | |
myo | Mycobacterium intracellulare subsp. yongonense | 5,390 | 2,227 | 49 | 49 | |
mchi | Mycobacterium intracellulare subsp. chimaera | 5,572 | 2,309 | 80 | 75 | |
mir | Mycobacterium paraintracellulare | 5,249 | 2,202 | 48 | 48 | |
mmal | Mycobacterium marseillense | 4,819 | 2,101 | 51 | 51 | |
mlp | Mycobacterium lepraemurium | 2,682 | 1,406 | 49 | 49 | |
mman | Mycobacterium mantenii | 5,839 | 2,322 | 57 | 50 | |
mser | Mycobacterium senriense | 5,453 | 2,207 | 57 | ||
msa | Mycobacterium sp. JS623 | 6,939 | 2,676 | 56 | 54 | |
mul | Mycobacterium ulcerans | 4,241 | 1,969 | 50 | 50 | |
mmi | Mycobacterium marinum M | 5,452 | 2,412 | 51 | 51 | |
mmae | Mycobacterium marinum E11 | 5,308 | 2,355 | 86 | 84 | |
mli | Mycobacterium liflandii | 5,064 | 2,170 | 51 | 49 | |
mpse | Mycobacterium pseudoshottsii | 5,079 | 2,151 | 54 | 50 | |
msho | Mycobacterium shottsii | 6,171 | 2,234 | 53 | 50 | |
mmc | Mycobacterium sp. MCS | 5,615 | 2,497 | 56 | 56 | |
mkm | Mycobacterium sp. KMS | 5,975 | 2,600 | 57 | 57 | |
mjl | Mycobacterium sp. JLS | 5,739 | 2,558 | 57 | 57 | |
mmm | Mycobacterium sp. MOTT36Y | 5,128 | 2,220 | 49 | 49 | |
mkn | Mycobacterium kansasii ATCC 12478 | 5,866 | 2,333 | 51 | 50 | |
myv | Mycobacterium sp. VKM Ac-1817D | 5,691 | 2,475 | 61 | 61 | |
mye | Mycobacterium sp. EPa45 | 5,599 | 2,431 | 54 | 53 | |
mhad | Mycobacterium haemophilum | 3,728 | 1,816 | 49 | 49 | |
mdx | Mycobacterium dioxanotrophicus | 7,339 | 2,985 | 96 | 93 | |
mshg | Mycobacterium shigaense | 4,920 | 2,153 | 64 | 52 | |
mfj | Mycobacterium florentinum | 5,914 | 2,474 | 59 | 51 | |
msto | Mycobacterium stomatepiae | 6,109 | 2,522 | 61 | 48 | |
msim | Mycobacterium simiae | 5,436 | 2,238 | 56 | 49 | |
msak | Mycobacterium saskatchewanense | 5,713 | 2,420 | 58 | 50 | |
mku | Mycobacterium kubicae | 5,393 | 2,201 | 52 | 50 | |
mlw | Mycobacterium lentiflavum | 5,533 | 2,273 | 53 | 10 | |
mxe | Mycobacterium xenopi | 4,898 | 2,085 | 53 | 51 | |
mnv | Mycobacterium noviomagense | 4,578 | 2,005 | 56 | 52 | |
mpag | Mycobacterium paragordonae | 6,265 | 2,569 | 53 | 53 | |
mnm | Mycobacterium novum | 4,221 | 1,932 | 64 | 56 | |
mgor | Mycobacterium vicinigordonae | 5,509 | 2,424 | 52 | 52 | |
mcoo | Mycobacterium cookii | 4,989 | 2,129 | 58 | 51 | |
mbai | Mycobacterium basiliense | 4,800 | 2,142 | 78 | 51 | |
mseo | Mycobacterium seoulense | 5,181 | 2,216 | 58 | 51 | |
mhek | Mycobacterium heckeshornense | 4,658 | 1,989 | 55 | 47 | |
mgau | Mycobacterium gallinarum | 6,202 | 2,472 | 56 | 51 | |
mlj | Mycobacterium lacus | 4,794 | 2,068 | 53 | 49 | |
mbrd | Mycobacterium branderi | 5,860 | 2,256 | 59 | 52 | |
mshj | Mycobacterium shinjukuense | 4,119 | 1,872 | 56 | 47 | |
mmam | Mycobacterium malmoense | 4,765 | 2,103 | 52 | 49 | |
mspg | Mycobacterium spongiae | 4,344 | 1,985 | 51 | 47 | |
mot | Mycobacterium ostraviense | 5,114 | 2,218 | 53 | 51 | |
mlm | Mycobacterium lepromatosis | 1,789 | 1,002 | 63 | 52 | |
mpaa | Mycobacterium paraterrae | 5,114 | 2,068 | 57 | 56 | |
mmeh | Candidatus Mycobacterium methanotrophicum | 4,385 | 1,776 | 58 | 12 | |
mky | Mycobacterium kiyosense | 6,263 | 2,211 | 59 | ||
madi | Mycobacterium adipatum | 5,634 | 2,405 | 57 | ||
mwu | Candidatus Mycobacterium wuenschmannii | 4,797 | 1,967 | 55 | ||
myw | Mycobacterium sp. MS1601 | 6,224 | 2,746 | 56 | 1 | |
myj | Mycobacterium sp. djl-10 | 6,177 | 2,769 | 55 | 1 | |
Mycolicibacterium | ||||||
msm | Mycolicibacterium smegmatis MC2 155 | Ref | 6,716 | 2,904 | 54 | 54 |
msg | Mycolicibacterium smegmatis MC2 155 | 6,693 | 2,966 | 52 | 52 | |
msb | Mycolicibacterium smegmatis MC2 155 | 6,625 | 2,935 | 54 | 54 | |
msn | Mycolicibacterium smegmatis INHR1 | 6,624 | 2,934 | 54 | 54 | |
msh | Mycolicibacterium smegmatis INHR2 | 6,623 | 2,935 | 54 | 54 | |
mva | Mycolicibacterium vanbaalenii | 5,979 | 2,651 | 58 | 55 | |
mgi | Mycolicibacterium gilvum PYR-GCK | 5,579 | 2,510 | 56 | 56 | |
msp | Mycolicibacterium gilvum Spyr1 | 5,349 | 2,446 | 55 | 55 | |
mcb | Mycolicibacterium chubuense | 5,843 | 2,533 | 55 | 54 | |
mne | Mycolicibacterium neoaurum VKM Ac-1815D | 4,664 | 2,291 | 53 | 53 | |
myn | Mycolicibacterium neoaurum NRRL B-3805 | 4,844 | 2,337 | 53 | 53 | |
mft | Mycolicibacterium fortuitum | 6,020 | 2,477 | 58 | 58 | |
mphl | Mycolicibacterium phlei | 5,149 | 2,352 | 66 | 51 | |
mvq | Mycolicibacterium vaccae | 5,722 | 2,634 | 54 | 51 | |
mll | Mycolicibacterium litorale | 5,238 | 2,317 | 56 | 55 | |
mrh | Mycolicibacterium rhodesiae | 6,147 | 2,584 | 56 | 54 | |
mthn | Mycolicibacterium thermoresistibile | 4,643 | 2,106 | 63 | 52 | |
mhas | Mycolicibacterium hassiacum | 4,919 | 2,180 | 60 | 51 | |
mdu | Mycolicibacterium duvalii | 5,449 | 2,334 | 62 | 52 | |
mcht | Mycolicibacterium chitae | 5,268 | 2,468 | 67 | 53 | |
mdr | Mycolicibacterium doricum | 3,974 | 1,860 | 58 | 53 | |
mauu | Mycolicibacterium aurum | 5,688 | 2,588 | 57 | 53 | |
mmag | Mycolicibacterium madagascariense | 5,690 | 2,495 | 60 | 53 | |
mmor | Mycolicibacterium moriokaense | 6,133 | 2,579 | 55 | 52 | |
mfx | Mycolicibacterium fallax | 4,029 | 1,874 | 68 | 54 | |
maic | Mycolicibacterium aichiense | 5,722 | 2,433 | 59 | 53 | |
mij | Mycolicibacterium insubricum | 4,336 | 1,953 | 60 | 53 | |
malv | Mycolicibacterium alvei | 5,843 | 2,402 | 93 | 66 | |
mty | Mycolicibacterium tokaiense | 6,113 | 2,785 | 59 | 53 | |
mpsc | Mycolicibacterium psychrotolerans | 5,555 | 2,401 | 66 | 54 | |
marz | Mycolicibacterium arabiense | 6,179 | 2,643 | 60 | 53 | |
mgad | Mycolicibacterium gadium | 5,917 | 2,469 | 54 | 52 | |
mhev | Mycolicibacterium helvum | 6,056 | 2,623 | 60 | 53 | |
msar | Mycolicibacterium sarraceniae | 4,893 | 2,053 | 54 | 53 | |
many | Mycolicibacterium anyangense | 5,421 | 2,426 | 54 | 53 | |
maub | Mycolicibacterium aubagnense | 6,224 | 2,514 | 89 | 82 | |
mpof | Mycolicibacterium poriferae | 5,681 | 2,533 | 56 | 52 | |
mphu | Mycolicibacterium phocaicum | 5,691 | 2,303 | 71 | 60 | |
mmuc | Mycolicibacterium mucogenicum | 5,792 | 2,439 | 67 | 60 | |
mmat | Mycolicibacterium mageritense | 7,831 | 3,164 | 100 | 80 | |
mbok | Mycolicibacterium boenickei | 6,355 | 2,623 | 65 | 57 | |
mfg | Mycolicibacterium farcinogenes | 6,184 | 2,511 | 59 | 58 | |
msei | Mycolicibacterium sediminis | 6,035 | 2,532 | 59 | 53 | |
mflv | Mycolicibacterium flavescens | 5,120 | 2,148 | 55 | 53 | |
mcee | Mycolicibacterium celeriflavum | 4,865 | 2,070 | 58 | 53 | |
mbrm | Mycolicibacterium brumae | 3,694 | 1,721 | 57 | 55 | |
mmon | Mycolicibacterium monacense | 5,629 | 2,425 | 56 | 56 | |
mgo | Mycolicibacterium goodii | 6,321 | 3,033 | 54 | 54 | |
mhol | Mycolicibacterium holsaticum | 5,240 | 2,319 | 56 | 55 | |
msen | Mycolicibacterium senegalense | 5,674 | 2,443 | 58 | 56 | |
mpae | Mycolicibacterium pallens | 5,770 | 2,461 | 56 | 55 | |
mrf | Mycolicibacterium rufum | 5,743 | 2,453 | 56 | 56 | |
mdf | Mycolicibacterium diernhoferi | 5,587 | 2,422 | 56 | 55 | |
mcro | Mycolicibacterium crocinum | 5,889 | 2,458 | 55 | 55 | |
mgro | Mycolicibacterium grossiae | 5,251 | 2,379 | 57 | 56 | |
maus | Mycolicibacterium austroafricanum | 5,836 | 2,488 | 54 | ||
mfre | Mycolicibacterium frederiksbergense | 6,157 | 2,606 | 55 | ||
mbug | Mycobacterium burgundiense | 5,054 | 2,315 | 57 | ||
Mycolicibacillus | ||||||
mkr | Mycolicibacillus koreensis | 4,115 | 1,894 | 95 | 87 | |
mpak | Mycolicibacillus parakoreensis | 3,664 | 1,771 | 55 | 55 | |
Mycobacteroides | ||||||
mab | Mycobacteroides abscessus ATCC 19977 | Ref | 4,942 | 2,033 | 50 | 50 |
mmv | Mycobacteroides abscessus subsp. massiliense GO 06 | 4,558 | 1,984 | 50 | 50 | |
mabb | Mycobacteroides abscessus subsp. bolletii 50594 | 5,185 | 2,094 | 50 | 49 | |
mabl | Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300 | 4,950 | 2,047 | 49 | 49 | |
mche | Mycobacteroides chelonae | 4,726 | 1,997 | 52 | 50 | |
miz | Mycobacteroides immunogenum | 5,385 | 2,180 | 69 | 67 | |
mste | Mycobacterium stephanolepidis | 4,981 | 2,076 | 62 | 53 | |
msao | Mycobacteroides saopaulense | 4,349 | 1,973 | 53 | 52 | |
msal | Mycobacteroides salmoniphilum | 4,625 | 1,999 | 61 | 58 | |
Mycolicibacter | ||||||
mjd | Mycolicibacter sinensis | 4,346 | 1,945 | 52 | 52 | |
mter | Mycolicibacter terrae | 4,176 | 1,929 | 57 | 53 | |
mmin | Mycolicibacter minnesotensis | 3,927 | 1,826 | 60 | 54 | |
mhib | Mycolicibacter hiberniae | 4,123 | 1,937 | 56 | 54 | |
mher | Mycolicibacter heraklionensis | 4,542 | 2,007 | 56 | 55 | |
mvm | Mycolicibacter virginiensis | 4,526 | 1,947 | 55 | 55 | |
mkk | Mycobacterium kokjensenii | 3,894 | 1,788 | 55 | ||
Hoyosella | ||||||
asd | Hoyosella subflava | 4,705 | 2,117 | 54 | 54 | |
Corynebacterium | ||||||
cgl | Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) | Ref | 3,099 | 1,489 | 81 | 80 |
cgb | Corynebacterium glutamicum ATCC 13032 (Bielefeld) | 3,057 | 1,516 | 80 | 80 | |
cgu | Corynebacterium glutamicum K051 | 2,992 | 1,510 | |||
cgt | Corynebacterium glutamicum R | 3,238 | 1,617 | |||
cgs | Corynebacterium glutamicum SCgG1 | 3,023 | 1,629 | 78 | 78 | |
cgg | Corynebacterium glutamicum SCgG2 | 3,025 | 1,629 | 78 | 78 | |
cgm | Corynebacterium glutamicum MB001 | 2,787 | 1,491 | 80 | 79 | |
cgj | Corynebacterium glutamicum ATCC 21831 | 2,785 | 1,508 | 79 | 78 | |
cgq | Corynebacterium glutamicum AR1 | 2,760 | 1,499 | 76 | 75 | |
cgx | Corynebacterium glutamicum B253 | 2,767 | 1,507 | 79 | 79 | |
cef | Corynebacterium efficiens | 2,998 | 1,539 | 71 | 71 | |
cdi | Corynebacterium diphtheriae NCTC 13129 | Ref | 2,272 | 1,248 | 69 | 66 |
cdp | Corynebacterium diphtheriae 241 | 2,245 | 1,259 | 65 | 65 | |
cdh | Corynebacterium diphtheriae INCA 402 | 2,215 | 1,293 | 65 | 65 | |
cdt | Corynebacterium diphtheriae HC01 | 2,248 | 1,259 | 68 | 68 | |
cde | Corynebacterium diphtheriae HC02 | 2,230 | 1,268 | 68 | 68 | |
cdr | Corynebacterium diphtheriae HC03 | 2,262 | 1,262 | 65 | 65 | |
cda | Corynebacterium diphtheriae HC04 | 2,276 | 1,263 | 65 | 65 | |
cdz | Corynebacterium diphtheriae 31A | 2,381 | 1,293 | 66 | 66 | |
cdb | Corynebacterium diphtheriae BH8 | 2,361 | 1,295 | 68 | 68 | |
cds | Corynebacterium diphtheriae C7 (beta) | 2,337 | 1,302 | 71 | 71 | |
cdd | Corynebacterium diphtheriae CDCE 8392 | 2,249 | 1,283 | 69 | 69 | |
cdw | Corynebacterium diphtheriae PW8 | 2,322 | 1,292 | 68 | 68 | |
cdv | Corynebacterium diphtheriae VA01 | 2,191 | 1,232 | 65 | 65 | |
cdip | Corynebacterium diphtheriae NCTC11397 | 2,337 | 1,301 | 56 | 56 | |
cjk | Corynebacterium jeikeium | 2,120 | 1,266 | 61 | 61 | |
cur | Corynebacterium urealyticum DSM 7109 | 2,024 | 1,183 | 60 | 60 | |
cua | Corynebacterium urealyticum DSM 7111 | 1,935 | 1,173 | 63 | 63 | |
car | Corynebacterium aurimucosum | 2,551 | 1,400 | 67 | 67 | |
ckp | Corynebacterium kroppenstedtii | 2,018 | 1,223 | 55 | 55 | |
cpu | Corynebacterium pseudotuberculosis FRC41 | 2,014 | 1,219 | 63 | 63 | |
cpl | Corynebacterium pseudotuberculosis 3/99-5 | 2,142 | 1,235 | 61 | 61 | |
cpg | Corynebacterium pseudotuberculosis 316 | 2,036 | 1,238 | 65 | 65 | |
cpp | Corynebacterium pseudotuberculosis P54B96 | 2,084 | 1,222 | 61 | 61 | |
cpk | Corynebacterium pseudotuberculosis 1002 | 2,011 | 1,228 | 62 | 62 | |
cpq | Corynebacterium pseudotuberculosis C231 | 2,004 | 1,220 | 63 | 63 | |
cpx | Corynebacterium pseudotuberculosis I19 | 2,015 | 1,223 | 63 | 59 | |
cpz | Corynebacterium pseudotuberculosis PAT10 | 2,079 | 1,218 | 60 | 60 | |
cor | Corynebacterium pseudotuberculosis 267 | 2,148 | 1,233 | 61 | 61 | |
cop | Corynebacterium pseudotuberculosis 31 | 2,069 | 1,229 | 66 | 65 | |
cod | Corynebacterium pseudotuberculosis 1/06-A | 1,963 | 1,181 | 61 | 61 | |
cos | Corynebacterium pseudotuberculosis 42/02-A | 2,051 | 1,227 | 61 | 61 | |
coi | Corynebacterium pseudotuberculosis CIP 52.97 | 2,051 | 1,239 | 65 | 65 | |
coe | Corynebacterium pseudotuberculosis 258 | 2,049 | 1,239 | 65 | 65 | |
cou | Corynebacterium pseudotuberculosis Cp162 | 2,019 | 1,237 | 63 | 63 | |
cpse | Corynebacterium pseudotuberculosis 48252 | 2,227 | 1,257 | 61 | 61 | |
cpsu | Corynebacterium pseudotuberculosis CS_10 | 2,232 | 1,256 | 61 | 61 | |
cpsf | Corynebacterium pseudotuberculosis Ft_2193/67 | 2,242 | 1,255 | 61 | 61 | |
crd | Corynebacterium resistens | 2,171 | 1,247 | 59 | 59 | |
cul | Corynebacterium ulcerans BR-AD22 | 2,334 | 1,317 | 64 | 64 | |
cuc | Corynebacterium ulcerans 809 | 2,180 | 1,308 | 64 | 64 | |
cue | Corynebacterium ulcerans 0102 | 2,349 | 1,315 | 63 | 63 | |
cun | Corynebacterium ulcerans 210932 | 2,263 | 1,289 | 63 | 63 | |
cuq | Corynebacterium ulcerans 210931 | 2,232 | 1,305 | 63 | 63 | |
cuz | Corynebacterium ulcerans 05146 | 2,260 | 1,298 | 60 | 60 | |
cuj | Corynebacterium ulcerans 131002 | 2,173 | 1,282 | 61 | 61 | |
cus | Corynebacterium ramonii FRC0011 | 2,146 | 1,303 | 63 | 63 | |
cva | Corynebacterium variabile | 3,039 | 1,548 | 77 | 77 | |
chn | Corynebacterium halotolerans | 2,865 | 1,525 | 65 | 65 | |
ccn | Corynebacterium callunae | 2,647 | 1,431 | 82 | 82 | |
cter | Corynebacterium terpenotabidum | 2,369 | 1,301 | 72 | 72 | |
cmd | Corynebacterium maris | 2,584 | 1,424 | 67 | 67 | |
caz | Corynebacterium argentoratense | 1,875 | 1,080 | 62 | 62 | |
cfn | Corynebacterium falsenii | 2,306 | 1,260 | 60 | 60 | |
ccg | Corynebacterium casei | 2,809 | 1,505 | 63 | 63 | |
cvt | Corynebacterium vitaeruminis | 2,577 | 1,440 | 68 | 68 | |
cgy | Corynebacterium glyciniphilum | 3,270 | 1,653 | 63 | 63 | |
cax | Corynebacterium atypicum | 1,578 | 940 | 65 | 65 | |
cii | Corynebacterium imitans | 2,013 | 1,167 | 67 | 67 | |
cuv | Corynebacterium ureicelerivorans | 1,922 | 1,090 | 63 | 63 | |
coa | Corynebacterium sp. ATCC 6931 | 2,105 | 1,264 | 68 | 68 | |
cdo | Corynebacterium doosanense | 2,492 | 1,320 | 66 | 65 | |
chm | Corynebacterium humireducens | 2,545 | 1,392 | 66 | 65 | |
csx | Corynebacterium singulare | 2,561 | 1,409 | 70 | 68 | |
cmq | Corynebacterium marinum | 2,550 | 1,409 | 65 | 65 | |
cku | Corynebacterium kutscheri | 2,047 | 1,188 | 70 | 64 | |
ccj | Corynebacterium camporealensis | 2,249 | 1,289 | 68 | 63 | |
cmv | Corynebacterium mustelae | 3,110 | 1,368 | 72 | 68 | |
cei | Corynebacterium epidermidicanis | 2,465 | 1,371 | 76 | 67 | |
cted | Corynebacterium testudinoris | 2,560 | 1,439 | 70 | 66 | |
cut | Corynebacterium uterequi | 2,163 | 1,296 | 72 | 71 | |
clw | Corynebacterium lactis | 2,364 | 1,331 | 63 | 63 | |
cdx | Corynebacterium deserti | 2,724 | 1,474 | 78 | 78 | |
csp | Corynebacterium simulans | 2,560 | 1,379 | 63 | 63 | |
csta | Corynebacterium stationis | 2,380 | 1,375 | 67 | 67 | |
ccjz | Corynebacterium crudilactis | 2,825 | 1,523 | 80 | 80 | |
cfk | Corynebacterium frankenforstense | 1,801 | 1,141 | 66 | 66 | |
cpho | Corynebacterium phocae | 2,246 | 1,234 | 63 | 63 | |
cfc | Corynebacterium flavescens | 2,202 | 1,298 | 68 | 60 | |
cgv | Corynebacterium glaucum | 2,377 | 1,278 | 69 | 59 | |
cstr | Corynebacterium striatum | 2,491 | 1,398 | 69 | 61 | |
caqu | Corynebacterium aquilae | 2,013 | 1,123 | 64 | 56 | |
csph | Corynebacterium sphenisci | 1,827 | 1,134 | 61 | 60 | |
camg | Corynebacterium ammoniagenes | 2,337 | 1,375 | 64 | 64 | |
cmin | Corynebacterium minutissimum | 2,463 | 1,348 | 65 | 64 | |
cpeg | Corynebacterium pelargi | 2,157 | 1,276 | 65 | 64 | |
cxe | Corynebacterium xerosis | 2,434 | 1,322 | 65 | 65 | |
cee | Corynebacterium endometrii | 2,183 | 1,285 | 64 | 63 | |
csan | Corynebacterium sanguinis | 2,146 | 1,234 | 66 | 66 | |
cgk | Corynebacterium geronticis | 2,094 | 1,252 | 62 | 59 | |
crf | Corynebacterium rouxii | 2,359 | 1,256 | 54 | 53 | |
crl | Corynebacterium renale | 2,161 | 1,241 | 66 | 57 | |
ccho | Corynebacterium choanae | 2,308 | 1,200 | 64 | 58 | |
cpre | Corynebacterium provencense | 2,663 | 1,473 | 78 | 76 | |
cpso | Corynebacterium pseudopelargi | 2,187 | 1,262 | 63 | 62 | |
csur | Corynebacterium suranareeae | 3,197 | 1,629 | 81 | 79 | |
ccys | Corynebacterium cystitidis | 2,837 | 1,417 | 66 | 60 | |
cmat | Corynebacterium matruchotii | 2,445 | 1,198 | 65 | 60 | |
cyz | Corynebacterium yudongzhengii | 2,142 | 1,271 | 67 | 58 | |
ckf | Corynebacterium kefirresidentii | 2,284 | 1,296 | 65 | 65 | |
cans | Corynebacterium anserum | 1,764 | 1,111 | 60 | 60 | |
clia | Corynebacterium liangguodongii | 2,115 | 1,234 | 68 | 67 | |
cprp | Corynebacterium propinquum | 2,101 | 1,223 | 58 | 55 | |
camc | Corynebacterium amycolatum | 2,085 | 1,255 | 71 | 71 | |
cglu | Corynebacterium glucuronolyticum | 2,398 | 1,314 | 68 | 59 | |
cuo | Corynebacterium urogenitale | 2,031 | 1,138 | 59 | 59 | |
cliz | Corynebacterium lizhenjunii | 2,288 | 1,214 | 67 | 67 | |
csil | Corynebacterium silvaticum | 2,030 | 1,183 | 63 | 63 | |
ctub | Corynebacterium tuberculostearicum | 2,201 | 1,224 | 66 | 61 | |
cluj | Corynebacterium lujinxingii | 2,182 | 1,139 | 66 | 66 | |
cqn | Corynebacterium qintianiae | 2,039 | 1,151 | 66 | 66 | |
ckw | Corynebacterium kalinowskii | 2,392 | 1,284 | 66 | 62 | |
ccoe | Corynebacterium comes | 2,675 | 1,457 | 71 | 70 | |
cok | Corynebacterium occultum | 2,842 | 1,446 | 81 | 68 | |
czo | Corynebacterium zhongnanshanii | 1,898 | 1,114 | 60 | 58 | |
cory | Corynebacterium sp. sy039 | 1,922 | 1,124 | 61 | 56 | |
cmf | Corynebacterium macginleyi | 2,187 | 1,192 | 65 | 65 | |
cwk | Corynebacterium wankanglinii | 1,679 | 856 | 57 | 57 | |
cuw | Corynebacterium uberis | 2,211 | 1,253 | 66 | 66 | |
cpoy | Corynebacterium poyangense | 2,358 | 1,232 | 64 | 64 | |
cacc | Corynebacterium accolens | 2,264 | 1,242 | 65 | 65 | |
cfy | Corynebacterium freneyi | 2,472 | 1,265 | 66 | 17 | |
cpsl | Corynebacterium pseudogenitalium | 2,152 | 1,180 | 69 | 4 | |
chin | Corynebacterium hindlerae | 2,403 | 1,312 | 65 | 5 | |
cjh | Corynebacterium jeddahense | 2,356 | 1,125 | 67 | 11 | |
cpsp | Corynebacterium pseudodiphtheriticum | 2,050 | 1,190 | 59 | 6 | |
cmas | Corynebacterium massiliense | 1,987 | 1,130 | 67 | ||
chei | Corynebacterium heidelbergense | 2,056 | 1,086 | 63 | 9 | |
cihu | Corynebacterium ihumii | 2,123 | 1,114 | 68 | 3 | |
ccoy | Corynebacterium coyleae | 2,344 | 1,188 | 66 | 2 | |
chad | Corynebacterium hadale | 2,442 | 1,298 | 71 | 1 | |
cfg | Corynebacterium freiburgense | 2,685 | 1,341 | 70 | 2 | |
caqm | Corynebacterium aquatimens | 2,193 | 1,121 | 61 | 1 | |
ccaw | Corynebacterium canis | 2,682 | 1,369 | 73 | 2 | |
caui | Corynebacterium auris | 2,213 | 1,244 | 67 | 1 | |
cfac | Corynebacterium faecale | 2,793 | 1,468 | 75 | ||
cfou | Corynebacterium fournieri | 2,194 | 1,155 | 69 | ||
cfeu | Corynebacterium felinum | 2,790 | 1,292 | 91 | 1 | |
caus | Corynebacterium auriscanis | 2,184 | 1,166 | 62 | 1 | |
catr | Corynebacterium atrinae | 2,633 | 1,390 | 67 | 1 | |
cdur | Corynebacterium durum | 2,569 | 1,271 | 68 | 1 | |
ccou | Corynebacterium confusum | 2,202 | 1,256 | 70 | ||
chan | Corynebacterium hansenii | 2,671 | 1,396 | 70 | 2 | |
cafe | Corynebacterium afermentans subsp. lipophilum | 2,164 | 1,164 | 67 | 1 | |
cgf | Corynebacterium guangdongense | 2,537 | 1,397 | 76 | 1 | |
cgoi | Corynebacterium gottingense | 2,321 | 1,247 | 69 | 1 | |
capp | Corynebacterium appendicis | 2,160 | 1,193 | 65 | 1 | |
cbov | Corynebacterium bovis | 2,088 | 1,166 | 70 | 1 | |
csue | Corynebacterium suedekumii | 2,619 | 1,327 | 67 | 1 | |
cbre | Corynebacterium breve | 2,342 | 1,281 | 67 | 1 | |
cpyr | Corynebacterium pyruviciproducens | 2,549 | 1,327 | 65 | ||
crie | Corynebacterium riegelii | 2,214 | 1,228 | 63 | 1 | |
cik | Corynebacterium incognita | 2,082 | 1,137 | 63 | ||
corn | Corynebacterium sp. NML98-0116 | 2,071 | 1,188 | 66 | ||
cgp | Corynebacterium genitalium | 2,150 | 1,179 | 60 | 1 | |
cpsk | Corynebacterium pseudokroppenstedtii | 2,085 | 1,215 | 58 | ||
ches | Corynebacterium hesseae | 2,482 | 1,339 | 67 | ||
cbel | Corynebacterium belfantii | 2,506 | 1,378 | 72 | ||
bfv | Brevibacterium flavum | 2,998 | 1,597 | 78 | 78 | |
Nocardia | ||||||
nfa | Nocardia farcinica IFM 10152 | 5,946 | 2,412 | 64 | 63 | |
nfr | Nocardia farcinica NCTC11134 | 6,122 | 2,462 | 68 | 58 | |
ncy | Nocardia cyriacigeorgica | 5,477 | 2,278 | 69 | 61 | |
nbr | Nocardia brasiliensis | 8,414 | 3,245 | 57 | 55 | |
nno | Nocardia nova | 7,578 | 2,871 | 58 | 58 | |
nsl | Nocardia mangyaensis | 6,307 | 2,578 | 63 | 63 | |
nsr | Nocardia seriolae | 7,794 | 2,770 | 77 | 73 | |
ntp | Nocardia terpenica | 7,696 | 2,938 | 68 | 67 | |
noz | Nocardia sp. CS682 | 7,856 | 3,035 | 68 | 66 | |
nod | Nocardia otitidiscaviarum | 6,649 | 2,670 | 82 | 79 | |
nah | Nocardia arthritidis | 9,002 | 3,230 | 69 | 67 | |
nad | Nocardia asteroides | 6,364 | 2,572 | 81 | 66 | |
nwl | Nocardia wallacei | 7,241 | 2,694 | 75 | 60 | |
nie | Nocardia iowensis | 8,106 | 2,918 | 66 | 62 | |
ntc | Nocardia tengchongensis | 6,832 | 2,350 | 80 | 74 | |
nhu | Nocardia huaxiensis | 7,450 | 2,736 | 90 | 76 | |
nya | Nocardia yamanashiensis | 7,597 | 2,801 | 88 | 76 | |
ngp | Nocardia gipuzkoensis | 7,198 | 2,604 | 62 | 62 | |
nspu | Nocardia sputorum | 6,765 | 2,451 | 73 | 15 | |
nyu | Nocardia yunnanensis | 7,145 | 2,647 | 72 | 1 | |
nvu | Nocardia vulneris | 8,435 | 3,150 | 62 | ||
Rhodococcus | ||||||
rha | Rhodococcus jostii | Ref | 9,145 | 3,246 | 65 | 65 |
rer | Rhodococcus erythropolis PR4 | 6,437 | 2,830 | 74 | 72 | |
rey | Rhodococcus erythropolis CCM2595 | 5,828 | 2,712 | 71 | 68 | |
reb | Rhodococcus erythropolis BG43 | 6,157 | 2,811 | 69 | 69 | |
rqi | Rhodococcus qingshengii | 6,160 | 2,717 | 76 | 61 | |
rop | Rhodococcus opacus B4 | 8,203 | 3,396 | 62 | 62 | |
roa | Rhodococcus opacus PD630 | 8,942 | 3,516 | 63 | 63 | |
rpy | Rhodococcus pyridinivorans SB3094 | 5,158 | 2,340 | 68 | 68 | |
rby | Rhodococcus pyridinivorans TG9 | 4,395 | 2,169 | 68 | 62 | |
rhb | Rhodococcus sp. B7740 | 5,213 | 2,338 | 59 | 57 | |
rav | Rhodococcus aetherivorans | 4,988 | 2,384 | 67 | 67 | |
rhw | Rhodococcus sp. WMMA185 | 3,705 | 1,867 | 65 | 59 | |
rrz | Rhodococcus ruber | 4,870 | 2,365 | 62 | 62 | |
rhu | Rhodococcus sp. PBTS 1 | 3,917 | 1,913 | 59 | 51 | |
rhq | Rhodococcus sp. p52 | 4,801 | 2,219 | 69 | 61 | |
rhod | Rhodococcus sp. 008 | 6,753 | 2,957 | 71 | 60 | |
rrt | Rhodococcus rhodochrous | 4,815 | 2,318 | 74 | 63 | |
rcr | Rhodococcus coprophilus | 4,164 | 2,123 | 74 | 53 | |
rtm | Rhodococcus triatomae | 4,314 | 2,136 | 61 | 57 | |
rko | Rhodococcus koreensis | 9,447 | 3,797 | 67 | 56 | |
rgo | Rhodococcus globerulus | 6,012 | 2,650 | 70 | 58 | |
roz | Rhodococcus oxybenzonivorans | 6,882 | 2,878 | 64 | 53 | |
rpsk | Rhodococcus pseudokoreensis | 8,702 | 3,433 | 65 | 21 | |
rgor | Rhodococcus gordoniae | 4,503 | 2,060 | 69 | 12 | |
rant | Rhodococcus antarcticus | 3,711 | 1,689 | 55 | 4 | |
rhop | Rhodococcus sp. P1Y | 5,253 | 2,347 | 62 | 2 | |
rhoo | Rhodococcus sp. DN22 | 6,766 | 2,808 | 72 | 1 | |
rhou | Rhodococcus sp. 11-3 | 5,496 | 2,492 | 68 | ||
rhow | Rhodococcus sp. WB1 | 5,375 | 2,490 | 69 | 1 | |
rhoj | Rhodococcus sp. JVH1 | 8,329 | 3,326 | 66 | 1 | |
rhos | Rhodococcus sp. M8-50 | 5,613 | 2,377 | 70 | ||
rhoq | Rhodococcus sp. M8-33 | 5,590 | 2,375 | 69 | ||
rhoy | Rhodococcus sp. AH-ZY2 | 5,661 | 2,438 | 70 | ||
rhoh | Rhodococcus sp. H-CA8f | 5,983 | 2,647 | 71 | 1 | |
rhox | Rhodococcus sp. D-6 | 4,871 | 2,188 | 69 | ||
rhjs | Rhodococcus sp. JS3073 | 8,555 | 3,601 | 65 | 1 | |
Rhodococcoides | ||||||
rfa | Rhodococcoides fascians D188 | 5,155 | 2,324 | 63 | 53 | |
rhs | Rhodococcoides fascians PBTS 2 | 4,980 | 2,338 | 62 | 53 | |
Prescottella | ||||||
req | Prescottella equi | 4,512 | 2,191 | |||
pdef | Prescottella defluvii | 4,093 | 1,257 | 71 | 10 | |
psow | Prescottella soli | 4,936 | 2,216 | 70 | ||
Williamsia | ||||||
whr | Williamsia herbipolensis | 4,295 | 1,907 | 54 | 1 | |
Gordonia | ||||||
gbr | Gordonia bronchialis | 4,696 | 2,143 | 58 | 58 | |
gpo | Gordonia polyisoprenivorans | 5,110 | 2,366 | 58 | 58 | |
gor | Gordonia sp. KTR9 | 5,175 | 2,286 | 54 | 54 | |
goq | Gordonia phthalatica | 3,902 | 1,897 | 63 | 63 | |
gta | Gordonia terrae | 4,939 | 2,358 | 58 | 54 | |
goc | Gordonia sp. YC-JH1 | 3,563 | 1,761 | 66 | 58 | |
git | Gordonia iterans | 3,458 | 1,750 | 66 | 66 | |
gru | Gordonia rubripertincta | 4,820 | 2,277 | 68 | 58 | |
gom | Gordonia insulae | 5,422 | 2,416 | 59 | 50 | |
gav | Gordonia alkanivorans | 4,308 | 2,118 | 63 | 63 | |
god | Gordonia sp. 135 | 4,492 | 2,171 | 66 | 57 | |
gos | Gordonia sp. SMJS1 | 4,700 | 2,044 | 58 | ||
goj | Gordonia sp. JH63 | 4,522 | 2,108 | 58 | ||
gam | Gordonia amarae | 4,457 | 2,197 | 66 | 58 | |
gpd | Gordonia pseudamarae | 4,393 | 2,074 | 69 | 58 | |
gji | Gordonia jinghuaiqii | 4,451 | 2,148 | 61 | 51 | |
goi | Gordonia otitidis | 4,488 | 2,111 | 56 | 51 | |
ghn | Gordonia hongkongensis | 4,561 | 2,073 | 59 | 55 | |
gami | Gordonia amicalis | 4,437 | 2,097 | 59 | 53 | |
gmg | Gordonia mangrovi | 4,768 | 2,014 | 58 | 53 | |
gsi | Gordonia sihwensis | 4,012 | 1,847 | 66 | 17 | |
goo | Gordonia sp. X0973 | 3,555 | 1,619 | 54 | ||
gop | Gordonia sp. PS3 | 3,422 | 1,793 | 66 | ||
Skermania | ||||||
spin | Skermania piniformis | 3,785 | 1,730 | 54 | 47 | |
Tsukamurella | ||||||
tpr | Tsukamurella paurometabola | 4,242 | 2,016 | 57 | 57 | |
tsm | Tsukamurella tyrosinosolvens | 4,673 | 2,139 | 57 | 54 | |
tpul | Tsukamurella pulmonis | 4,667 | 1,970 | 60 | 49 | |
tsd | Tsukamurella sp. PLM1 | 4,809 | 1,849 | 64 | ||
Segniliparus | ||||||
srt | Segniliparus rotundus | 3,006 | 1,366 | 53 | 51 | |
Dietzia | ||||||
dtm | Dietzia timorensis | 3,306 | 1,664 | 53 | 53 | |
dit | Dietzia sp. oral taxon 368 | 3,269 | 1,632 | 66 | 65 | |
diz | Dietzia sp. JS16-p6b | 3,269 | 1,714 | 55 | 55 | |
dpc | Dietzia psychralcaliphila | 3,449 | 1,799 | 60 | 60 | |
dlu | Dietzia lutea | 3,343 | 1,758 | 65 | 65 | |
dkn | Dietzia kunjamensis | 3,665 | 1,746 | 62 | 62 | |
dcd | Dietzia cinnamea | 3,321 | 1,645 | 65 | ||
Lawsonella | ||||||
cbq | Lawsonella clevelandensis | 1,378 | 842 | 53 | 53 | |
Tomitella | ||||||
toy | Tomitella fengzijianii | 3,528 | 1,786 | 63 | 63 | |
Streptomyces | ||||||
sco | Streptomyces coelicolor | Ref | 8,154 | 2,887 | 86 | |
salb | Streptomyces albidoflavus | 5,832 | 2,371 | 87 | 86 | |
sma | Streptomyces avermitilis | Ref | 7,684 | 2,697 | 89 | 88 |
sgr | Streptomyces griseus | Ref | 7,136 | 2,709 | 86 | 86 |
sgb | Streptomyces globisporus | 6,654 | 2,693 | 86 | 85 | |
sfi | Streptomyces microflavus | 6,925 | 2,689 | 91 | 89 | |
sanl | Streptomyces anulatus | 7,412 | 2,828 | 89 | 2 | |
sgrf | Streptomyces graminofaciens | 10,451 | 3,389 | 87 | 1 | |
scye | Streptomyces cyaneofuscatus | 6,966 | 2,699 | 88 | ||
scb | Streptomyces scabiei | 8,746 | 3,171 | 93 | 91 | |
ssx | Streptomyces sp. SirexAA-E | 6,357 | 2,593 | 85 | 84 | |
svl | Streptomyces violaceusniger | 8,985 | 3,232 | 84 | 84 | |
shy | Streptomyces hygroscopicus subsp. jinggangensis 5008 | 9,108 | 3,140 | 87 | 86 | |
sho | Streptomyces hygroscopicus subsp. jinggangensis TL01 | 8,878 | 3,081 | 87 | 21 | |
src | Streptomyces rapamycinicus | 10,002 | 3,652 | 66 | 65 | |
smal | Streptomyces malaysiensis | 8,558 | 3,372 | 83 | 82 | |
ssoi | Streptomyces solisilvae | 8,797 | 3,458 | 91 | 86 | |
sfa | Streptomyces pratensis | 6,572 | 2,648 | 88 | 88 | |
sbh | Streptomyces bingchenggensis | 10,022 | 3,556 | 84 | 83 | |
sve | Streptomyces venezuelae | 7,453 | 2,770 | 88 | 85 | |
sdv | Streptomyces davaonensis | 8,616 | 3,073 | 81 | 79 | |
sals | Streptomyces albus | 7,330 | 2,630 | 81 | 81 | |
strp | Streptomyces sp. PAMC 26508 | 7,073 | 2,649 | 85 | 85 | |
sci | Streptomyces collinus | 7,113 | 2,678 | 90 | 86 | |
slv | Streptomyces lividans | 7,360 | 2,828 | 82 | 82 | |
sgu | Streptomyces glaucescens | Ref | 6,567 | 2,506 | 84 | 83 |
svt | Streptomyces vietnamensis | 7,356 | 2,795 | 93 | 92 | |
stre | Streptomyces sp. 769 | 9,553 | 2,990 | 86 | 85 | |
scw | Streptomyces cyaneogriseus | 5,830 | 2,358 | 85 | 85 | |
sld | Streptomyces lydicus A02 | 8,888 | 2,858 | 85 | 85 | |
slc | Streptomyces lydicus 103 | 6,872 | 2,686 | 92 | 91 | |
sxi | Streptomyces xiamenensis | 5,490 | 2,262 | 70 | 70 | |
strm | Streptomyces sp. Mg1 | 7,117 | 2,637 | 93 | 92 | |
strc | Streptomyces sp. CNQ-509 | 6,407 | 2,601 | 73 | 73 | |
samb | Streptomyces ambofaciens | 7,793 | 2,787 | 91 | 89 | |
spri | Streptomyces pristinaespiralis | 7,352 | 2,809 | 83 | 82 | |
scz | Streptomyces sp. CFMR 7 | 6,716 | 2,752 | 84 | 84 | |
scx | Streptomyces sp. CdTB01 | 8,743 | 3,281 | 89 | 82 | |
srw | Streptomyces reticuli | 8,090 | 2,933 | 106 | 88 | |
strf | Streptomyces sp. 4F | 6,792 | 2,647 | 87 | 87 | |
sle | Streptomyces leeuwenhoekii | 7,005 | 2,626 | 84 | 84 | |
srn | Streptomyces rubrolavendulae | 5,425 | 2,224 | 112 | 83 | |
spav | Streptomyces parvulus | 6,714 | 2,733 | 86 | 86 | |
strt | Streptomyces sp. SAT1 | 6,110 | 2,507 | 90 | 90 | |
sclf | Streptomyces clavuligerus | 5,981 | 2,381 | 86 | 86 | |
sgs | Streptomyces griseochromogenes | 9,064 | 3,120 | 95 | 91 | |
stsi | Streptomyces qaidamensis | 7,661 | 2,997 | 88 | 87 | |
sky | Streptomyces koyangensis | 5,988 | 2,419 | 90 | 90 | |
salw | Streptomyces alboniger | 6,613 | 2,649 | 88 | 87 | |
sgm | Streptomyces aurantiacus | 8,309 | 3,023 | 97 | 83 | |
scad | Streptomyces cadmiisoli | 8,385 | 3,079 | 92 | 92 | |
sphw | Streptomyces phaeoluteigriseus | 7,648 | 2,731 | 94 | 89 | |
sgrs | Streptomyces griseoaurantiacus | 6,516 | 2,437 | 88 | ||
sls | Streptomyces lincolnensis | 8,590 | 3,424 | 85 | 84 | |
snr | Streptomyces noursei ATCC 11455 | 8,691 | 2,965 | 97 | 97 | |
salu | Streptomyces noursei NK660 | 8,086 | 2,912 | 91 | 90 | |
sall | Streptomyces noursei ZPM | 8,191 | 2,931 | 90 | 89 | |
splu | Streptomyces pluripotens | 6,014 | 2,394 | 90 | 89 | |
strd | Streptomyces sp. CCM_MD2014 | 6,948 | 2,747 | 87 | 85 | |
snw | Streptomyces niveus | 6,575 | 2,571 | 86 | 86 | |
sauo | Streptomyces autolyticus | 7,692 | 3,164 | 85 | 85 | |
ssia | Streptomyces alfalfae | 7,030 | 2,717 | 88 | 87 | |
svu | Streptomyces violaceoruber | 6,571 | 2,577 | 86 | 86 | |
spun | Streptomyces fodineus | 7,980 | 2,856 | 90 | 89 | |
sgv | Streptomyces gilvosporeus | 7,144 | 2,722 | 90 | 88 | |
slau | Streptomyces laurentii | 7,452 | 2,483 | 90 | 89 | |
salf | Streptomyces alboflavus | 9,247 | 2,962 | 84 | 84 | |
salj | Streptomyces albireticuli | 6,970 | 2,574 | 92 | 91 | |
slx | Streptomyces lavendulae subsp. lavendulae | 7,942 | 2,705 | 158 | 81 | |
stro | Streptomyces sp. MOE7 | 6,782 | 2,613 | 91 | 91 | |
sfk | Streptomyces formicae | 8,162 | 3,118 | 83 | 83 | |
snz | Streptomyces nigra | 6,693 | 2,621 | 91 | 89 | |
sge | Streptomyces griseorubiginosus | 8,364 | 3,186 | 102 | 88 | |
srj | Streptomyces rochei | 7,568 | 2,715 | 88 | 87 | |
slk | Streptomyces lunaelactis | 7,139 | 2,647 | 87 | 87 | |
sdx | Streptomyces dengpaensis | 7,397 | 2,716 | 94 | 91 | |
sgd | Streptomyces griseoviridis | 7,416 | 2,937 | 88 | 88 | |
sqz | Streptomyces qinzhouensis | 6,348 | 2,428 | 88 | 87 | |
scya | Streptomyces cyaneochromogenes | 8,907 | 3,321 | 90 | 88 | |
sast | Streptomyces calvus | 6,365 | 2,585 | 80 | 78 | |
snq | Streptomyces nodosus | 6,491 | 2,639 | 89 | 88 | |
stir | Streptomyces tirandamycinicus | 5,939 | 2,431 | 88 | 88 | |
ska | Streptomyces kanamyceticus | 8,384 | 3,189 | 87 | 87 | |
sgz | Streptomyces globosus | 6,321 | 2,460 | 95 | 91 | |
svn | Streptomyces vinaceus | 6,603 | 2,538 | 92 | 92 | |
snk | Streptomyces nitrosporeus | 6,364 | 2,544 | 96 | 92 | |
shaw | Streptomyces hawaiiensis | 7,534 | 2,987 | 88 | 87 | |
srk | Streptomyces rectiverticillatus | 6,270 | 2,499 | 100 | 98 | |
sfic | Streptomyces ficellus | 6,144 | 2,422 | 87 | 86 | |
sgal | Streptomyces galilaeus | 6,725 | 2,638 | 97 | 90 | |
sspo | Streptomyces spongiicola | 5,669 | 2,274 | 87 | 86 | |
svr | Streptomyces viridifaciens | 6,453 | 2,459 | 107 | 107 | |
spad | Streptomyces paludis | 6,815 | 2,772 | 87 | 87 | |
sfy | Streptomyces fagopyri | 7,306 | 2,797 | 95 | 89 | |
saqu | Streptomyces aquilus | 9,090 | 3,349 | 96 | 90 | |
sgf | Streptomyces griseofuscus | 8,114 | 2,861 | 114 | 89 | |
scav | Streptomyces cavourensis | 6,257 | 2,632 | 86 | 86 | |
sseo | Streptomyces seoulensis | 5,665 | 2,296 | 87 | 87 | |
sby | Streptomyces buecherae | 6,347 | 2,444 | 90 | 87 | |
srim | Streptomyces rimosus | 7,756 | 2,888 | 92 | 91 | |
ssub | Streptomyces subrutilus | 6,431 | 2,562 | 92 | 91 | |
sphv | Streptomyces phaeolivaceus | 8,383 | 3,024 | 89 | 88 | |
scin | Streptomyces cinereoruber | 6,392 | 2,470 | 90 | 87 | |
sfug | Streptomyces fungicidicus | 6,584 | 2,639 | 87 | 86 | |
spac | Streptomyces pactum | 6,913 | 2,733 | 88 | 87 | |
stsu | Streptomyces tsukubensis | 6,376 | 2,428 | 87 | 86 | |
scha | Streptomyces chartreusis | 8,396 | 3,268 | 92 | 89 | |
sgx | Streptomyces gardneri | 7,791 | 2,915 | 98 | 94 | |
scoe | Streptomyces coeruleorubidus | 8,058 | 3,193 | 88 | 87 | |
sbat | Streptomyces bathyalis | 6,161 | 2,539 | 80 | 78 | |
sspb | Streptomyces spectabilis | 7,936 | 2,928 | 86 | 86 | |
snf | Streptomyces nojiriensis | 8,103 | 2,594 | 121 | 91 | |
spla | Streptomyces platensis | 7,032 | 2,651 | 91 | 91 | |
sbro | Streptomyces broussonetiae | 8,225 | 2,975 | 91 | 90 | |
stui | Streptomyces tuirus | 6,984 | 2,625 | 105 | 85 | |
sata | Streptomyces atratus | 7,696 | 2,741 | 91 | 88 | |
schf | Streptomyces chromofuscus | 6,313 | 2,407 | 91 | 72 | |
shun | Streptomyces hundungensis | 7,432 | 2,581 | 110 | 72 | |
shar | Streptomyces harbinensis | 5,071 | 2,142 | 79 | 59 | |
scyg | Streptomyces cyanogenus | 7,590 | 2,670 | 110 | 74 | |
sfeu | Streptomyces ferrugineus | 8,515 | 3,178 | 90 | 70 | |
slia | Streptomyces liangshanensis | 6,445 | 2,462 | 90 | 73 | |
sdw | Streptomyces decoyicus | 7,196 | 2,742 | 91 | 70 | |
svd | Streptomyces viridosporus | 6,211 | 2,428 | 91 | 73 | |
scal | Streptomyces californicus | 6,730 | 2,561 | 87 | 72 | |
sauh | Streptomyces auratus | 6,516 | 2,528 | 90 | 74 | |
sfb | Streptomyces fradiae | 5,465 | 2,173 | 86 | 70 | |
smob | Streptomyces mobaraensis | 6,246 | 2,283 | 97 | 77 | |
spra | Streptomyces prasinus | 6,263 | 2,452 | 89 | 77 | |
speu | Streptomyces peucetius subsp. caesius | 6,410 | 2,370 | 87 | 76 | |
sroi | Streptomyces roseirectus | 8,221 | 3,017 | 92 | 73 | |
sxn | Streptomyces xanthii | 7,382 | 2,817 | 92 | 72 | |
sgj | Streptomyces genisteinicus | 6,555 | 2,543 | 95 | ||
shk | Streptomyces huasconensis | 6,988 | 2,625 | 94 | 75 | |
sanu | Streptomyces angustmyceticus | 6,767 | 2,570 | 91 | 71 | |
stry | Streptomyces sp. S6 | 4,266 | 1,701 | 86 | 70 | |
sdd | Streptomyces dangxiongensis | 6,405 | 2,448 | 88 | 74 | |
sact | Streptomyces actuosus | 7,070 | 2,580 | 92 | 76 | |
smao | Streptomyces marincola | 5,249 | 2,167 | 73 | 53 | |
sgob | Streptomyces gobiensis | 5,064 | 2,075 | 80 | 67 | |
sine | Streptomyces inhibens | 8,228 | 2,897 | 93 | 73 | |
slf | Streptomyces liliifuscus | 9,628 | 3,491 | 94 | 71 | |
sdec | Streptomyces deccanensis | 8,575 | 3,184 | 91 | 74 | |
saov | Streptomyces aureoverticillatus | 7,902 | 2,847 | 91 | 72 | |
sdur | Streptomyces durmitorensis | 8,417 | 3,051 | 90 | 47 | |
syan | Streptomyces yangpuensis | 7,060 | 2,398 | 97 | 24 | |
srug | Streptomyces rutgersensis | 5,478 | 2,235 | 90 | 32 | |
sakb | Streptomyces akebiae | 8,530 | 3,079 | 91 | 4 | |
staa | Streptomyces tanashiensis | 7,574 | 2,737 | 98 | 31 | |
snig | Streptomyces nigrescens | 8,495 | 2,763 | 109 | 33 | |
svio | Streptomyces violascens | 5,841 | 2,392 | 92 | 27 | |
scae | Streptomyces caniscabiei | 8,659 | 3,099 | 91 | 5 | |
stub | Streptomyces tubbatahanensis | 6,377 | 2,582 | 81 | 6 | |
sspn | Streptomyces spinosirectus | 7,692 | 2,937 | 94 | 4 | |
scir | Streptomyces cinnabarinus | 8,379 | 3,016 | 93 | 5 | |
sxt | Streptomyces xanthophaeus | 7,750 | 2,657 | 110 | 2 | |
slon | Streptomyces longhuiensis | 8,796 | 3,212 | 93 | 2 | |
sdrz | Streptomyces drozdowiczii | 6,031 | 2,345 | 87 | 6 | |
stud | Streptomyces tubercidicus | 6,877 | 2,555 | 90 | 4 | |
stee | Streptomyces tendae | 6,147 | 2,418 | 89 | 2 | |
seng | Streptomyces endophytica | 5,086 | 1,922 | 87 | ||
sgk | Streptomyces goshikiensis | 6,992 | 2,520 | 96 | 2 | |
sant | Streptomyces antimycoticus | 7,933 | 2,955 | 85 | 1 | |
syun | Streptomyces yunnanensis | 8,255 | 2,873 | 95 | 2 | |
sarg | Streptomyces argyrophylli | 6,677 | 2,581 | 90 | 3 | |
sjn | Streptomyces janthinus | 8,322 | 3,079 | 94 | 1 | |
scyn | Streptomyces cynarae | 7,769 | 2,848 | 91 | 1 | |
sov | Streptomyces olivoreticuli | 7,046 | 2,488 | 99 | 4 | |
sfiy | Streptomyces finlayi | 6,464 | 2,410 | 93 | ||
shau | Streptomyces halobius | 7,708 | 2,593 | 92 | ||
skg | Streptomyces koelreuteriae | 7,525 | 3,019 | 92 | ||
scoa | Streptomyces coralus | 8,960 | 3,326 | 89 | ||
slai | Streptomyces laculatispora | 7,091 | 2,701 | 91 | ||
sroc | Streptomyces roseicoloratus | 5,573 | 1,957 | 92 | ||
sfp | Streptomyces flavofungini | 7,827 | 2,818 | 91 | ||
schg | Streptomyces changanensis | 5,751 | 2,227 | 89 | ||
sttn | Streptomyces sp. TN58 | 6,531 | 2,308 | 93 | ||
sinn | Streptomyces incarnatus | 7,429 | 2,759 | 76 | ||
strz | Streptomyces sp. 71268 | 6,365 | 2,394 | 90 | ||
scay | Streptomyces cathayae | 6,561 | 2,273 | 91 | ||
kbu | Streptomyces sp. NL15-2K | 10,526 | 3,582 | 96 | 3 | |
sarm | Streptomyces armeniacus | 6,640 | 2,604 | 66 | ||
sprf | Streptomyces profundus | 6,063 | 2,506 | 76 | ||
sluo | Streptomyces luomodiensis | 8,036 | 3,071 | 86 | ||
stpb | Streptomyces sp. PBH53 | 7,433 | 2,761 | 88 | ||
srpa | Streptomyces sp. RPA4-5 | 7,201 | 2,605 | 92 | ||
smib | Streptomyces mirabilis | 8,145 | 2,892 | 97 | ||
scaj | Streptomyces camelliae | 8,407 | 3,101 | 89 | ||
strw | Streptomyces sp. WP-1 | 6,501 | 2,344 | 102 | ||
strl | Streptomyces sp. RLB1-33 | 10,095 | 3,292 | 98 | ||
stsd | Streptomyces sp. S1D4-11 | 9,533 | 2,756 | 104 | ||
srpz | Streptomyces sp. RPA4-2 | 8,171 | 2,845 | 95 | ||
sche | Streptomyces chengbuensis | 6,758 | 2,565 | 89 | ||
sgly | Streptomyces glycanivorans | 7,362 | 2,717 | 92 | ||
scat | Streptomyces castrisilvae | 6,671 | 2,671 | 91 | ||
stii | Streptomyces sp. ICC1 | 7,671 | 2,680 | 88 | ||
stic | Streptomyces sp. ICC4 | 7,690 | 2,676 | 88 | ||
sabd | Streptomyces albidocamelliae | 7,278 | 2,662 | 90 | ||
strv | Streptomyces sp. VN1 | 6,988 | 2,699 | 87 | ||
spaz | Streptomyces parvus | 6,454 | 2,392 | 89 | ||
spih | Streptomyces phytohabitans | 5,220 | 2,128 | 76 | ||
smod | Streptomyces moderatus | 7,206 | 2,820 | 75 | ||
Streptantibioticus | ||||||
sct | Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488 | Ref | 7,475 | 2,514 | 102 | 83 |
scy | Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488 | 7,569 | 2,523 | 82 | 82 | |
Kitasatospora | ||||||
ksk | Kitasatospora setae | Ref | 7,569 | 2,581 | 104 | 98 |
kab | Kitasatospora albolonga | 6,713 | 2,635 | 86 | 86 | |
kau | Kitasatospora aureofaciens | 5,866 | 2,260 | 99 | 99 | |
kit | Kitasatospora sp. MMS16-BH015 | 7,231 | 2,732 | 107 | 106 | |
kis | Kitasatospora sp. NA04385 | 7,061 | 2,404 | 109 | 99 | |
kch | Kitasatospora cathayae | 7,830 | 2,615 | 113 | ||
Peterkaempfera | ||||||
stri | Peterkaempfera bronchialis | 5,681 | 2,409 | 93 | 93 | |
Yinghuangia | ||||||
yia | Yinghuangia sp. ASG 101 | 6,856 | 2,376 | 73 | 69 | |
Streptacidiphilus | ||||||
strh | Streptacidiphilus sp. P02-A3a | 7,584 | 2,461 | 97 | 34 | |
Actinacidiphila | ||||||
abry | Actinacidiphila bryophytorum | 6,815 | 2,414 | 83 | 50 | |
agla | Actinacidiphila glaucinigra | 8,542 | 2,895 | 97 | 3 | |
arev | Actinacidiphila reveromycinica | 7,263 | 2,596 | 79 | ||
Tropheryma | ||||||
twh | Tropheryma whipplei Twist | 808 | 571 | 54 | 54 | |
tws | Tropheryma whipplei TW08/27 | 783 | 568 | 55 | 55 | |
Luteimicrobium | ||||||
lxl | Luteimicrobium xylanilyticum | 3,726 | 1,791 | 55 | 55 | |
Pengzhenrongella | ||||||
psic | Pengzhenrongella sicca | 3,907 | 1,833 | 57 | 57 | |
pphp | Pengzhenrongella phosphoraccumulans | 4,469 | 1,910 | 58 | ||
Leifsonia | ||||||
lxx | Leifsonia xyli subsp. xyli CTCB07 | 2,030 | 1,078 | 50 | 50 | |
lxy | Leifsonia xyli subsp. cynodontis DSM 46306 | 2,470 | 1,147 | 49 | 49 | |
leif | Leifsonia sp. PS1209 | 3,819 | 1,880 | 55 | 54 | |
lse | Leifsonia shinshuensis | 4,365 | 2,052 | 52 | 52 | |
leiz | Leifsonia sp. ZF2019 | 4,070 | 1,795 | 64 | ||
Clavibacter | ||||||
cmi | Clavibacter michiganensis subsp. michiganensis | 3,079 | 1,545 | 55 | 50 | |
cmh | Clavibacter michiganensis subsp. insidiosus | 3,012 | 1,438 | 53 | 53 | |
cms | Clavibacter sepedonicus | 3,119 | 1,439 | 45 | 45 | |
cmc | Clavibacter nebraskensis | 2,817 | 1,445 | 46 | 39 | |
ccap | Clavibacter capsici | 2,901 | 1,448 | 52 | 52 | |
czh | Clavibacter zhangzhiyongii | 2,856 | 1,439 | 54 | 54 | |
cpha | Clavibacter phaseoli | 2,992 | 1,472 | 54 | 54 | |
ccaf | Clavibacter californiensis | 3,008 | 1,433 | 54 | 54 | |
Microbacterium | ||||||
mts | Microbacterium testaceum | 3,676 | 1,800 | 51 | 51 | |
mim | Microbacterium sp. CGR1 | 3,299 | 1,698 | 52 | 52 | |
mio | Microbacterium sp. No. 7 | 4,164 | 1,928 | 55 | 55 | |
mix | Microbacterium sp. XT11 | 1,927 | 1,076 | 52 | 52 | |
mip | Microbacterium sp. PAMC 28756 | 3,276 | 1,706 | 56 | 56 | |
mcw | Microbacterium chocolatum | 2,884 | 1,462 | 58 | 58 | |
mpal | Microbacterium paludicola | 3,130 | 1,650 | 55 | 55 | |
mih | Microbacterium sp. BH-3-3-3 | 3,113 | 1,621 | 57 | 57 | |
micr | Microbacterium sp. 1.5R | 3,378 | 1,723 | 54 | 54 | |
maur | Microbacterium aurum | 3,096 | 1,532 | 52 | 52 | |
mhos | Microbacterium hominis | 3,286 | 1,618 | 79 | 75 | |
mfol | Microbacterium foliorum | 3,264 | 1,673 | 54 | 54 | |
moo | Microbacterium oleivorans | 2,877 | 1,503 | 59 | 55 | |
mlv | Microbacterium lemovicicum | 3,295 | 1,650 | 61 | 54 | |
mwa | Microbacterium wangchenii | 3,612 | 1,757 | 54 | 54 | |
mprt | Microbacterium protaetiae | 3,406 | 1,736 | 54 | 53 | |
msed | Microbacterium sediminis | 2,709 | 1,485 | 54 | 54 | |
moy | Microbacterium oxydans | 3,763 | 1,846 | 60 | 54 | |
msf | Microbacterium schleiferi | 2,823 | 1,328 | 55 | 52 | |
mcaw | Microbacterium caowuchunii | 2,972 | 1,589 | 57 | 56 | |
mlz | Microbacterium lushaniae | 3,375 | 1,675 | 56 | 55 | |
mrn | Microbacterium resistens | 3,712 | 1,773 | 56 | ||
mics | Microbacterium sp. SGAir0570 | 3,170 | 1,635 | 57 | 54 | |
mbin | Microbacterium binotii | 3,137 | 1,530 | 55 | 53 | |
mliq | Microbacterium maritypicum | 3,573 | 1,667 | 57 | 33 | |
mtec | Microbacterium terricola | 3,028 | 1,349 | 52 | 14 | |
mpao | Microbacterium paraoxydans | 3,447 | 1,619 | 57 | 35 | |
maza | Microbacterium azadirachtae | 3,405 | 1,619 | 54 | 33 | |
mely | Microbacterium elymi | 2,675 | 881 | 55 | 4 | |
mnf | Microbacterium neungamense | 2,295 | 1,232 | 54 | 3 | |
msuw | Microbacterium suwonense | 3,315 | 1,485 | 55 | 1 | |
mark | Microbacterium arborescens | 3,118 | 1,572 | 56 | 3 | |
mrg | Microbacterium rhizosphaerae | 3,609 | 1,698 | 55 | ||
minv | Microbacterium invictum | 3,344 | 1,582 | 52 | ||
mest | Microbacterium esteraromaticum | 2,986 | 1,517 | 59 | 2 | |
moj | Microbacterium oryzae | 2,727 | 1,445 | 59 | ||
mpln | Microbacterium plantarum | 3,195 | 1,569 | 56 | ||
mliy | Microbacterium limosum | 2,587 | 1,386 | 53 | ||
mice | Microbacterium sp. RG1 | 3,041 | 1,521 | 54 | 1 | |
maug | Microbacterium aurugineum | 3,398 | 1,769 | 55 | ||
msuf | Microbacterium sufflavum | 3,379 | 1,732 | 54 | ||
mhot | Microbacterium horticulturae | 3,398 | 1,689 | 56 | 1 | |
mgab | Microbacterium galbinum | 3,282 | 1,258 | 53 | ||
mbet | Microbacterium betulae | 3,335 | 1,740 | 57 | ||
micm | Microbacterium sp. che218 | 3,387 | 1,621 | 62 | ||
mici | Microbacterium sp. HA-8 | 3552 | 52 | |||
Paramicrobacterium | ||||||
mchn | Paramicrobacterium chengjingii | 3,419 | 1,740 | 55 | 55 | |
Rhodoluna | ||||||
rla | Rhodoluna lacicola | 1,364 | 890 | 42 | 42 | |
rpla | Candidatus Rhodoluna planktonica | 1,327 | 876 | 46 | 46 | |
rhok | Rhodoluna sp. KAS3 | 1,316 | 849 | 44 | 1 | |
Aquiluna | ||||||
aqg | Aquiluna borgnonia | 1,370 | 895 | 47 | 47 | |
aqk | Aquiluna sp. KACHI24 | 1,397 | 865 | 46 | 46 | |
Rathayibacter | ||||||
rtx | Rathayibacter toxicus 70137 | 1,740 | 961 | 52 | 52 | |
rtc | Rathayibacter toxicus WAC3373 | 2,012 | 1,072 | 52 | 52 | |
rtn | Rathayibacter tritici | 2,866 | 1,405 | 49 | 49 | |
rry | Rathayibacter rathayi | 2,817 | 1,349 | 53 | 53 | |
ria | Rathayibacter iranicus | 3,101 | 1,418 | 55 | 55 | |
rfs | Rathayibacter festucae | 3,858 | 1,801 | 55 | 55 | |
rte | Rathayibacter tanaceti | 2,932 | 1,457 | 56 | 55 | |
roe | Rathayibacter oskolensis | 3,165 | 995 | 56 | 3 | |
rath | Rathayibacter sp. VKM Ac-2759 | 3,814 | 1,749 | 54 | ||
Curtobacterium | ||||||
cum | Curtobacterium sp. MR_MD2014 | 2,675 | 1,381 | 61 | 60 | |
cub | Curtobacterium sp. BH-2-1-1 | 3,515 | 1,712 | 59 | 59 | |
cug | Curtobacterium sp. SGAir0471 | 3,151 | 1,546 | 64 | 62 | |
cqf | Curtobacterium flaccumfaciens | 3,618 | 1,589 | 59 | 58 | |
ccit | Curtobacterium citreum | 3,307 | 1,572 | 63 | 4 | |
cuf | Curtobacterium aetherium | 3,050 | 1,402 | 61 | ||
cuy | Curtobacterium sp. YC1 | 3,144 | 1,481 | 59 | ||
cpoi | Curtobacterium poinsettiae | 3,508 | 1,554 | 59 | ||
curt | Curtobacterium sp. TXMA1 | 3,154 | 1,479 | 62 | 1 | |
curz | Curtobacterium sp. C1 | 3,504 | 1,578 | 63 | ||
Microterricola | ||||||
mvd | Microterricola viridarii | 3,122 | 1,632 | 67 | 67 | |
Frondihabitans | ||||||
frp | Frondihabitans sp. PAMC 28766 | 4,126 | 1,696 | 57 | 57 | |
fsb | Frondihabitans sucicola | 5,168 | 1,703 | 79 | 3 | |
Agromyces | ||||||
agy | Agromyces aureus | 3,698 | 1,784 | 63 | 62 | |
agm | Agromyces badenianii | 2,774 | 1,474 | 54 | 54 | |
agf | Agromyces protaetiae | 3,139 | 1,521 | 59 | 59 | |
aarc | Agromyces archimandritae | 3,077 | 1,567 | 54 | 54 | |
amau | Agromyces marinus | 2,958 | 1,507 | 64 | 56 | |
asoi | Agromyces soli | 3,553 | 1,765 | 54 | 53 | |
amav | Agromyces mangrovi | 3,490 | 1,615 | 60 | 4 | |
alav | Agromyces larvae | 3,705 | 1,673 | 57 | 3 | |
ail | Agromyces intestinalis | 3,349 | 1,646 | 56 | ||
Cryobacterium | ||||||
cart | Cryobacterium arcticum | 3,936 | 1,913 | 63 | 63 | |
cry | Cryobacterium sp. LW097 | 3,613 | 1,744 | 61 | 61 | |
Cnuibacter | ||||||
cphy | Cnuibacter physcomitrellae | 4,012 | 1,867 | 54 | 54 | |
Aurantimicrobium | ||||||
amin | Aurantimicrobium minutum | 1,573 | 944 | 45 | 44 | |
aum | Aurantimicrobium photophilum | 1,746 | 1,023 | 46 | 45 | |
auw | Aurantimicrobium sp. MWH-Uga1 | 1,566 | 965 | 45 | 45 | |
aut | Aurantimicrobium sp. INA4 | 1,533 | 930 | 45 | 2 | |
Pontimonas | ||||||
psai | Pontimonas salivibrio | 1,698 | 1,038 | 52 | 52 | |
Microcella | ||||||
malk | Microcella alkaliphila | 2,652 | 1,401 | 48 | 48 | |
chre | Chryseoglobus sp. 28M-23 | 2,404 | 1,302 | 52 | 51 | |
mhum | Microcella humidisoli | 2,531 | 1,265 | 51 | ||
mdb | Microcella daejeonensis | 2,556 | 1,324 | 55 | ||
Mycetocola | ||||||
myl | Mycetocola zhujimingii | 2,957 | 1,513 | 59 | 59 | |
mspo | Mycetocola spongiae | 2,845 | 1,431 | 73 | 73 | |
Salinibacterium | ||||||
salc | Salinibacterium hongtaonis | 2,601 | 1,444 | 55 | 55 | |
sala | Salinibacterium sp. UTAS2018 | 2,751 | 1,465 | 53 | 53 | |
sald | Salinibacterium sp. dk2585 | 2,619 | 1,485 | 55 | 55 | |
Humibacter | ||||||
hum | Humibacter sp. BT305 | 3,539 | 1,651 | 53 | 53 | |
huw | Humibacter ginsenosidimutans | 3,604 | 1,655 | 55 | 54 | |
Gryllotalpicola | ||||||
gry | Gryllotalpicola protaetiae | 3,484 | 1,610 | 57 | 57 | |
Protaetiibacter | ||||||
lyd | Protaetiibacter intestinalis | 2,836 | 1,491 | 52 | 52 | |
lyk | Protaetiibacter larvae | 2,346 | 1,259 | 51 | 51 | |
proa | Protaetiibacter sp. SSC-01 | 2,690 | 959 | 52 | ||
Plantibacter | ||||||
plap | Plantibacter sp. PA-3-X8 | 3,699 | 1,841 | 57 | 57 | |
pflu | Plantibacter flavus | 3,790 | 1,791 | 58 | ||
Leucobacter | ||||||
leu | Leucobacter muris | 2,795 | 1,445 | 56 | 56 | |
ltr | Leucobacter triazinivorans | 3,005 | 1,572 | 55 | 55 | |
leb | Leucobacter coleopterorum | 2,378 | 1,111 | 54 | 54 | |
ldn | Leucobacter denitrificans | 2,200 | 1,257 | 54 | 54 | |
lvi | Leucobacter viscericola | 3,159 | 1,465 | 57 | 54 | |
lins | Leucobacter insecticola | 2,329 | 1,152 | 56 | 55 | |
llut | Leucobacter luti | 2,831 | 1,437 | 58 | 58 | |
lari | Leucobacter aridicollis | 3,159 | 1,350 | 61 | 59 | |
lall | Leucobacter allii | 3,222 | 1,597 | 60 | 60 | |
lrp | Leucobacter rhizosphaerae | 2,996 | 1,553 | 58 | 9 | |
ltn | Leucobacter tenebrionis | 3,002 | 1,492 | 60 | 2 | |
Agrococcus | ||||||
agg | Agrococcus sp. SGAir0287 | 2,870 | 1,466 | 51 | 49 | |
agro | Agrococcus sp. Marseille-Q4369 | 2,644 | 1,280 | 53 | ||
Marisediminicola | ||||||
mant | Marisediminicola antarctica | 2,992 | 1,539 | 53 | 53 | |
Herbiconiux | ||||||
hea | Herbiconiux sp. SALV-R1 | 4,168 | 1,964 | 55 | 55 | |
heh | Herbiconiux sp. L3-i23 | 3,039 | 1,202 | 58 | 52 | |
Frigoribacterium | ||||||
frn | Frigoribacterium sp. NBH87 | 3,049 | 1,522 | 54 | 54 | |
Glaciihabitans | ||||||
gln | Glaciihabitans sp. INWT7 | 3,254 | 1,609 | 51 | 51 | |
Agreia | ||||||
agx | Agreia sp. COWG | 3,498 | 1,620 | 62 | 54 | |
Subtercola | ||||||
subt | Subtercola sp. PAMC28395 | 2,840 | 1,484 | 57 | 56 | |
suba | Subtercola endophyticus | 3,874 | 1,402 | 56 | 55 | |
Pseudoclavibacter | ||||||
psev | Pseudoclavibacter triregionum | 2,063 | 1,086 | 67 | 56 | |
Gulosibacter | ||||||
gsd | Gulosibacter sediminis | 2,447 | 1,351 | 55 | 54 | |
gmn | Gulosibacter molinativorax | 3,243 | 1,225 | 58 | 57 | |
Homoserinibacter | ||||||
hom | Homoserinibacter sp. YIM 151385 | 2,736 | 1,154 | 51 | 51 | |
Naasia | ||||||
naei | Naasia aerilata | 3,668 | 1,430 | 56 | 4 | |
Lysinibacter | ||||||
lyh | Lysinibacter sp. HNR | 2,537 | 1,303 | 56 | 2 | |
Antiquaquibacter | ||||||
aog | Antiquaquibacter oligotrophicus | 2,776 | 1,302 | 51 | 1 | |
Arthrobacter | ||||||
art | Arthrobacter sp. FB24 | 4,506 | 2,206 | 69 | 69 | |
arr | Arthrobacter sp. Rue61a | 4,575 | 2,209 | 71 | 70 | |
arm | Arthrobacter sp. PAMC 25486 | 4,366 | 1,909 | 71 | 71 | |
arl | Arthrobacter sp. 'calajunan' LS16 | 3,255 | 1,706 | 87 | 87 | |
are | Arthrobacter sp. ERGS1:01 | 3,920 | 1,940 | 73 | 73 | |
aaq | Arthrobacter alpinus R3.8 | 3,268 | 1,681 | 70 | 70 | |
arw | Arthrobacter alpinus A3 | 3,828 | 1,941 | 72 | 72 | |
arh | Arthrobacter sp. Hiyo8 | 7,038 | 1,956 | 68 | 63 | |
ary | Arthrobacter sp. YC-RL1 | 3,578 | 1,744 | 87 | 87 | |
aru | Arthrobacter sp. U41 | 4,132 | 1,974 | 69 | 69 | |
arq | Arthrobacter sp. QXT-31 | 4,379 | 2,091 | 75 | 75 | |
arn | Arthrobacter sp. YN | 4,391 | 2,087 | 76 | 76 | |
arx | Arthrobacter sp. ZXY-2 | 4,906 | 2,146 | 72 | 71 | |
acry | Arthrobacter crystallopoietes | 4,438 | 2,173 | 67 | 67 | |
arth | Arthrobacter sp. PGP41 | 3,760 | 1,956 | 64 | 64 | |
artp | Arthrobacter sp. PAMC25564 | 3,613 | 1,912 | 69 | 68 | |
acit | Arthrobacter citreus | 4,939 | 2,486 | 131 | 130 | |
aagi | Arthrobacter agilis | 2,980 | 1,529 | 56 | 52 | |
ajg | Arthrobacter jiangjiafuii | 3,282 | 1,651 | 74 | 74 | |
asun | Arthrobacter sunyaminii | 3,483 | 1,773 | 74 | 74 | |
asuf | Arthrobacter sulfonylureivorans | 3,671 | 1,796 | 67 | 67 | |
arty | Arthrobacter sp. Hiyo4 | 5,120 | 1,407 | 62 | 62 | |
apoa | Arthrobacter polaris | 3,194 | 1,478 | 71 | 71 | |
aww | Arthrobacter woluwensis | 3,235 | 1,570 | 68 | 68 | |
acao | Arthrobacter caoxuetaonis | 3,640 | 1,711 | 110 | 20 | |
azh | Arthrobacter zhangbolii | 3,140 | 1,629 | 72 | 72 | |
ageg | Arthrobacter gengyunqii | 3,309 | 1,681 | 74 | 74 | |
aod | Arthrobacter oryzae | 4,168 | 2,063 | 68 | 1 | |
ako | Arthrobacter koreensis | 3,135 | 1,665 | 73 | 3 | |
azx | Arthrobacter zhaoxinii | 3,140 | 1,598 | 76 | 2 | |
ajr | Arthrobacter jinronghuae | 3,329 | 1,642 | 76 | 2 | |
artm | Arthrobacter sp. MN05-02 | 3,543 | 1,547 | 65 | 1 | |
artu | Arthrobacter sp. UKPF54-2 | 3,110 | 1,645 | 68 | 1 | |
artz | Arthrobacter sp. 24S4-2 | 4,521 | 2,123 | 68 | ||
artq | Arthrobacter sp. 7749 | 3,616 | 1,804 | 62 | ||
arta | Arthrobacter sp. ATA002 | 3,115 | 1,363 | 74 | ||
arto | Arthrobacter sp. OVS8 | 2,598 | 886 | 68 | ||
Psychromicrobium | ||||||
ari | Psychromicrobium lacuslunae | 2,893 | 1,470 | 53 | 53 | |
Paenarthrobacter | ||||||
aau | Paenarthrobacter aurescens | 4,587 | 2,200 | 73 | 73 | |
pue | Paenarthrobacter ureafaciens | 4,041 | 2,029 | 74 | 74 | |
pnv | Paenarthrobacter nicotinovorans | 4,068 | 1,997 | 75 | 75 | |
payj | Paenarthrobacter sp. YJN-5 | 4,906 | 2,169 | 113 | 1 | |
pago | Paenarthrobacter sp. GOM3 | 4,054 | 2,002 | 76 | 1 | |
payn | Paenarthrobacter sp. YJN-D | 4,070 | 1,974 | 71 | 1 | |
phrz | Paenarthrobacter sp. R1 | 4,625 | 2,112 | 73 | 1 | |
arz | Arthrobacter sp. ATCC 21022 | 3,895 | 2,054 | 68 | 68 | |
Pseudarthrobacter | ||||||
ach | Pseudarthrobacter chlorophenolicus | 4,590 | 2,160 | 104 | 100 | |
apn | Pseudarthrobacter phenanthrenivorans | 4,131 | 2,076 | 65 | 65 | |
psul | Pseudarthrobacter sulfonivorans | 4,393 | 2,175 | 68 | 68 | |
psni | Pseudarthrobacter sp. NIBRBAC000502771 | 3,947 | 1,994 | 70 | 69 | |
psey | Pseudarthrobacter psychrotolerans | 4,227 | 1,985 | 69 | 69 | |
pdel | Pseudarthrobacter defluvii | 4,068 | 1,996 | 69 | 1 | |
pok | Pseudarthrobacter oxydans | 3,950 | 2,012 | 65 | 1 | |
psls | Pseudarthrobacter sp. L1SW | 3,679 | 1,877 | 65 | 1 | |
psfe | Pseudarthrobacter sp. Fe7 | 3,050 | 1,183 | 71 | 1 | |
pqa | Pseudarthrobacter quantipunctorum | 3,832 | 1,967 | 65 | ||
Glutamicibacter | ||||||
aai | Glutamicibacter arilaitensis | 3,436 | 1,696 | 82 | 82 | |
gar | Glutamicibacter halophytocola | 3,477 | 1,791 | 85 | 85 | |
gcr | Glutamicibacter creatinolyticus | 2,882 | 1,564 | 74 | 70 | |
glu | Glutamicibacter sp. ZJUTW | 3,325 | 1,752 | 86 | 86 | |
gpr | Glutamicibacter protophormiae | 3,539 | 1,698 | 88 | 88 | |
gmi | Glutamicibacter mishrai | 3,335 | 1,636 | 94 | 86 | |
gmy | Glutamicibacter mysorens | 3,328 | 1,656 | 87 | 86 | |
gnc | Glutamicibacter nicotianae | 3,387 | 1,675 | 85 | ||
glm | Glutamicibacter sp. M10 | 3,065 | 1,476 | 87 | 1 | |
gey | Glutamicibacter ectropisis | 3,258 | 1,673 | 86 | 1 | |
Renibacterium | ||||||
rsa | Renibacterium salmoninarum | 3,507 | 1,645 | 51 | 51 | |
Kocuria | ||||||
krh | Kocuria rhizophila | 2,356 | 1,351 | 57 | 57 | |
kpl | Kocuria palustris | 2,234 | 1,337 | 56 | 56 | |
kfv | Kocuria flava | 3,052 | 1,590 | 60 | 54 | |
kii | Kocuria marina subsp. indica | 2,348 | 1,352 | 58 | 58 | |
krs | Kocuria rosea | 3,452 | 1,814 | 58 | 58 | |
kod | Kocuria sp. KD4 | 2,329 | 1,380 | 59 | 58 | |
kvr | Kocuria varians | 2,403 | 1,409 | 65 | 59 | |
Micrococcus | ||||||
mlu | Micrococcus luteus | 2,236 | 1,280 | 56 | 56 | |
mick | Micrococcus sp. KBS0714 | 2,170 | 1,286 | 57 | 57 | |
myu | Micrococcus yunnanensis | 2,151 | 1,225 | 57 | 57 | |
mly | Micrococcus lylae | 2,286 | 1,238 | 58 | 2 | |
mpor | Micrococcus porci | 2,384 | 1,242 | 58 | 4 | |
mteu | Micrococcus terreus | 2,740 | 1,367 | 57 | 3 | |
micu | Micrococcus sp. HOU01 | 2,223 | 1,222 | 58 | ||
Rothia | ||||||
rmu | Rothia mucilaginosa | 1,992 | 986 | 60 | 60 | |
rdn | Rothia dentocariosa | 2,217 | 1,065 | 65 | 62 | |
raj | Rothia aeria | 2,799 | 1,052 | 56 | 56 | |
rter | Rothia terrae | 2,315 | 1,254 | 65 | 64 | |
rama | Rothia amarae | 2,214 | 1,196 | 63 | 62 | |
rkr | Rothia kristinae | 2,012 | 1,210 | 60 | 60 | |
Sinomonas | ||||||
satk | Sinomonas atrocyanea | 4,110 | 2,042 | 69 | 69 | |
ccyc | Sinomonas cyclohexanicum | 4,168 | 1,915 | 72 | 66 | |
Neomicrococcus | ||||||
nae | Neomicrococcus aestuarii | 2,295 | 1,335 | 58 | 58 | |
Auritidibacter | ||||||
aul | Auritidibacter sp. NML130574 | 2,265 | 1,316 | 56 | 56 | |
aig | Auritidibacter ignavus | 2,413 | 1,283 | 57 | 57 | |
Citricoccus | ||||||
cig | Citricoccus sp. SGAir0253 | 2,950 | 751 | 61 | 61 | |
cmua | Citricoccus muralis | 2,777 | 1,440 | 56 | 56 | |
Paeniglutamicibacter | ||||||
paey | Paeniglutamicibacter sp. Y32M11 | 3,586 | 1,797 | 82 | 81 | |
Pseudoglutamicibacter | ||||||
palu | Pseudoglutamicibacter albus | 1,831 | 1,058 | 58 | 58 | |
Beutenbergia | ||||||
bcv | Beutenbergia cavernae | 4,197 | 1,985 | 53 | 53 | |
Brachybacterium | ||||||
bfa | Brachybacterium faecium | 3,068 | 1,696 | 62 | 62 | |
brx | Brachybacterium sp. P6-10-X1 | 3,698 | 1,905 | 62 | 62 | |
brv | Brachybacterium avium | 2,872 | 1,511 | 63 | 63 | |
bgg | Brachybacterium ginsengisoli | 3,382 | 1,790 | 62 | 62 | |
brz | Brachybacterium vulturis | 3,253 | 1,744 | 62 | 62 | |
bsau | Brachybacterium saurashtrense | 3,173 | 1,724 | 62 | 62 | |
brr | Brachybacterium sp. SGAir0954 | 2,955 | 1,620 | 62 | 62 | |
bki | Brachybacterium kimchii | 3,816 | 1,482 | 100 | 63 | |
brha | Brachybacterium sp. NBEC-018 | 3,436 | 1,665 | 65 | 62 | |
bhh | Brachybacterium halotolerans subsp. kimchii | 3,584 | 1,425 | 62 | 62 | |
bhq | Brachybacterium huguangmaarense | 2,884 | 1,233 | 61 | 58 | |
brac | Brachybacterium sp. GU-2 | 3,237 | 1,041 | 64 | ||
Dermabacter | ||||||
dva | Dermabacter vaginalis | 2,129 | 1,207 | 58 | 58 | |
djj | Dermabacter jinjuensis | 1,996 | 1,170 | 61 | 61 | |
dhm | Dermabacter hominis | 1,974 | 1,155 | 61 | 1 | |
Helcobacillus | ||||||
hmm | Helcobacillus massiliensis | 2,229 | 1,235 | 61 | 1 | |
Jonesia | ||||||
jde | Jonesia denitrificans | 2,511 | 1,404 | 80 | 80 | |
Kytococcus | ||||||
kse | Kytococcus sedentarius | 2,554 | 1,313 | 55 | 55 | |
Dermacoccus | ||||||
dni | Dermacoccus nishinomiyaensis | 2,279 | 1,272 | 60 | 60 | |
day | Dermacoccus abyssi | 2,719 | 1,427 | 62 | 62 | |
derm | Dermacoccus sp. PAMC28757 | 2,815 | 1,371 | 63 | 63 | |
Luteipulveratus | ||||||
lmoi | Luteipulveratus mongoliensis | 4,692 | 2,038 | 53 | 53 | |
Yimella | ||||||
yim | Yimella sp. cx-51 | 2,964 | 1,563 | 57 | 57 | |
Allobranchiibius | ||||||
alx | Allobranchiibius sp. GilTou73 | 3,304 | 1,504 | 55 | 55 | |
Barrientosiimonas | ||||||
bei | Barrientosiimonas endolithica | 3,866 | 1,621 | 61 | ||
Xylanimonas | ||||||
xce | Xylanimonas cellulosilytica | 3,443 | 1,710 | 64 | 63 | |
xyl | Xylanimonas allomyrinae | 3,057 | 1,552 | 62 | 62 | |
xya | Xylanimonas protaetiae | 3,325 | 1,659 | 64 | 62 | |
Isoptericola | ||||||
iva | Isoptericola variabilis | 2,881 | 1,597 | 60 | 60 | |
ido | Isoptericola dokdonensis | 3,403 | 1,728 | 74 | 63 | |
Cellulosimicrobium | ||||||
cet | Cellulosimicrobium sp. TH-20 | 3,687 | 1,842 | 63 | 62 | |
cceu | Cellulosimicrobium cellulans | 3,975 | 1,908 | 64 | 62 | |
cprt | Cellulosimicrobium protaetiae | 4,001 | 1,777 | 63 | 62 | |
Promicromonospora | ||||||
prou | Promicromonospora sp. Populi | 4,630 | 2,033 | 63 | ||
Sanguibacter | ||||||
ske | Sanguibacter keddieii | 3,710 | 1,852 | 65 | 65 | |
sanw | Sanguibacter sp. HDW7 | 2,907 | 1,514 | 64 | 63 | |
sbil | Sanguibacter biliveldensis | 3,664 | 1,796 | 66 | ||
Cellulomonas | ||||||
cfl | Cellulomonas flavigena | 3,678 | 1,714 | 54 | 54 | |
cfi | Cellulomonas fimi | 3,762 | 1,863 | 54 | 54 | |
cga | Cellulomonas gilvus | 3,164 | 1,595 | 54 | 54 | |
cez | Cellulomonas sp. PSBB021 | 3,252 | 1,572 | 55 | 55 | |
celz | Cellulomonas shaoxiangyii | 3,337 | 1,712 | 58 | 57 | |
cej | Cellulomonas sp. JZ18 | 3,240 | 1,590 | 57 | 56 | |
celh | Cellulomonas sp. H30R-01 | 3,875 | 1,875 | 54 | 54 | |
cira | Cellulomonas iranensis | 3,532 | 1,745 | 54 | 54 | |
cpal | Cellulomonas palmilytica | 3,351 | 1,499 | 54 | 54 | |
celc | Cellulomonas sp. C5510 | 3,710 | 1,705 | 54 | 54 | |
cdon | Cellulomonas dongxiuzhuiae | 3,512 | 1,500 | 54 | 54 | |
cwan | Cellulomonas wangleii | 3,630 | 1,579 | 57 | 57 | |
cfen | Cellulomonas fengjieae | 3,659 | 1,573 | 54 | 54 | |
cwn | Cellulomonas wangsupingiae | 3,710 | 1,718 | 54 | 54 | |
cche | Cellulomonas chengniuliangii | 3,219 | 1,659 | 62 | 62 | |
cxie | Cellulomonas xiejunii | 3,755 | 1,682 | 54 | 54 | |
cele | Cellulomonas sp. ES6 | 3,640 | 1,782 | 54 | ||
cela | Cellulomonas sp. ATA003 | 3,419 | 482 | 59 | 1 | |
celn | Cellulomonas sp. NTE-D12 | 3,389 | 1,696 | 61 | ||
Oerskovia | ||||||
oek | Oerskovia sp. KBS0722 | 3,717 | 1,848 | 68 | 68 | |
Pseudactinotalea | ||||||
psei | Pseudactinotalea sp. HY158 | 3,066 | 1,588 | 56 | 55 | |
Paraoerskovia | ||||||
psek | Paraoerskovia sediminicola | 3,390 | 1,521 | 65 | 5 | |
Intrasporangium | ||||||
ica | Intrasporangium calvum | 3,563 | 1,810 | 57 | 55 | |
Arsenicicoccus | ||||||
ars | Arsenicicoccus sp. oral taxon 190 | 2,844 | 1,548 | 55 | 55 | |
Janibacter | ||||||
jte | Janibacter indicus | 3,153 | 1,617 | 55 | 55 | |
jli | Janibacter limosus | 3,298 | 1,690 | 58 | 58 | |
jme | Janibacter melonis | 3,265 | 1,633 | 57 | 55 | |
jay | Janibacter sp. YB324 | 3,136 | 1,521 | 57 | 57 | |
jcr | Janibacter cremeus | 3,274 | 1,696 | 56 | 56 | |
jai | Janibacter alittae | 3,175 | 1,640 | 56 | ||
jtr | Janibacter terrae | 3,470 | 1,656 | 57 | ||
Nostocoides | ||||||
teh | Nostocoides sp. HKS02 | 3,054 | 1,510 | 52 | 52 | |
Phycicoccus | ||||||
phw | Phycicoccus sp. HDW14 | 3,400 | 1,460 | 53 | 52 | |
pei | Phycicoccus endophyticus | 2,873 | 1,528 | 53 | 52 | |
Terrabacter | ||||||
ted | Terrabacter sp. C0L_2 | 4,448 | 1,904 | 60 | ||
Knoellia | ||||||
kno | Knoellia sp. S7-12 | 3,911 | 1,733 | 54 | ||
Serinicoccus | ||||||
serj | Serinicoccus hydrothermalis | 3,308 | 1,675 | 51 | 51 | |
Ornithinimicrobium | ||||||
orn | Ornithinimicrobium avium | 3,435 | 1,698 | 56 | 56 | |
orz | Ornithinimicrobium ciconiae | 3,624 | 1,701 | 55 | 55 | |
ord | Ornithinimicrobium sp. INDO-MA30-4 | 2,496 | 642 | 59 | 58 | |
ocp | Ornithinimicrobium cryptoxanthini | 3,383 | 1,585 | 56 | 55 | |
ofa | Ornithinimicrobium faecis | 4,157 | 1,864 | 55 | ||
serw | Ornithinimicrobium pratense | 3,081 | 1,608 | 56 | 55 | |
Brevibacterium | ||||||
bly | Brevibacterium linens BS258 | 3,242 | 1,678 | 62 | 62 | |
blin | Brevibacterium aurantiacum | 3,822 | 1,781 | 61 | 61 | |
bri | Brevibacterium sp. CS2 | 2,718 | 1,479 | 55 | 55 | |
blut | Brevibacterium luteolum | 2,781 | 1,524 | 58 | 55 | |
bcau | Brevibacterium casei | 3,509 | 1,765 | 61 | 61 | |
bspo | Brevibacterium spongiae | 3,680 | 1,771 | 63 | 63 | |
breb | Brevibacterium sp. BDJS002 | 3,721 | 1,738 | 65 | ||
brej | Brevibacterium sp. JSBI002 | 3,204 | 1,595 | 61 | ||
Dermatophilus | ||||||
dco | Dermatophilus congolensis | 2,313 | 1,315 | 59 | 59 | |
Austwickia | ||||||
aus | Austwickia sp. Fred_18-Q3-R57-64_BATAC.85v2 | 3,674 | 1,814 | 55 | 55 | |
Georgenia | ||||||
gez | Georgenia wutianyii | 2,928 | 1,605 | 59 | 59 | |
gyu | Georgenia yuyongxinii | 3,620 | 1,808 | 59 | 59 | |
gew | Georgenia sp. TF02-10 | 3,514 | 1,668 | 55 | ||
Ruania | ||||||
halt | Ruania alkalisoli | 3,857 | 2,003 | 54 | 54 | |
rhal | Ruania halotolerans | 3,762 | 1,848 | 54 | 54 | |
rsua | Ruania suaedae | 3,191 | 1,641 | 54 | 54 | |
Demequina | ||||||
dem | Demequina sp. TMPB413 | 2,751 | 1,384 | 51 | 51 | |
dss | Demequina sediminis | 2,853 | 1,262 | 59 | 4 | |
dcp | Demequina capsici | 2,872 | 1,501 | 55 | ||
Cutibacterium | ||||||
pac | Cutibacterium acnes KPA171202 | 2,297 | 1,340 | 54 | 54 | |
pak | Cutibacterium acnes SK137 | 2,352 | 1,324 | 58 | 58 | |
pav | Cutibacterium acnes TypeIA2 P.acn17 | 2,263 | 1,335 | 54 | 54 | |
pax | Cutibacterium acnes TypeIA2 P.acn31 | 2,244 | 1,323 | 54 | 54 | |
paz | Cutibacterium acnes TypeIA2 P.acn33 | 2,233 | 1,324 | 54 | 54 | |
paw | Cutibacterium acnes 266 | 2,348 | 1,315 | 54 | 54 | |
pad | Cutibacterium acnes subsp. defendens ATCC 11828 | 2,259 | 1,325 | 51 | 51 | |
pcn | Cutibacterium acnes 6609 | 2,348 | 1,345 | 54 | 54 | |
pacc | Cutibacterium acnes C1 | 2,359 | 1,335 | 53 | 53 | |
pach | Cutibacterium acnes HL096PA1 | 2,249 | 1,307 | 54 | 54 | |
pacn | Cutibacterium acnes hdn-1 | 2,243 | 1,300 | 54 | 54 | |
cacn | Cutibacterium acnes KCOM 1861 (= ChDC B594) | 2,212 | 1,319 | 64 | 64 | |
pra | Cutibacterium avidum | 2,242 | 1,347 | 55 | 55 | |
prl | Cutibacterium modestum | 2,375 | 1,331 | 59 | 59 | |
cgrn | Cutibacterium granulosum | 1,805 | 1,100 | 56 | 53 | |
cequ | Cutibacterium equinum | 2,150 | 1,264 | 58 | 2 | |
Propionibacterium | ||||||
pfr | Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 | 2,375 | 1,299 | 45 | 45 | |
pfre | Propionibacterium freudenreichii subsp. freudenreichii DSM 20271 | 2,320 | 1,334 | 50 | 49 | |
pacd | Propionibacterium acidifaciens | 2,439 | 1,391 | 53 | 53 | |
paus | Propionibacterium australiense | 2,619 | 1,501 | 57 | 53 | |
Arachnia | ||||||
ppc | Pseudopropionibacterium propionicum | 2,938 | 1,501 | 59 | 56 | |
arub | Arachnia rubra | 2,923 | 1,473 | 56 | 56 | |
Acidipropionibacterium | ||||||
pbo | Acidipropionibacterium acidipropionici ATCC 4875 | 3,336 | 1,728 | 65 | 65 | |
aaci | Acidipropionibacterium acidipropionici CGMCC 1.2230 | 3,162 | 1,695 | 66 | 66 | |
acij | Acidipropionibacterium virtanenii | 3,086 | 1,647 | 66 | 62 | |
aji | Acidipropionibacterium jensenii | 2,536 | 1,466 | 62 | 62 | |
Microlunatus | ||||||
mph | Microlunatus phosphovorus | 5,359 | 2,198 | 54 | 52 | |
mik | Microlunatus elymi | 4,536 | 2,090 | 52 | 51 | |
micg | Microlunatus sp. Gsoil 973 | 4,323 | 1,914 | 53 | 51 | |
Tessaracoccus | ||||||
tfl | Tessaracoccus flavus | 2,794 | 1,473 | 53 | 53 | |
tfa | Tessaracoccus flavescens | 3,292 | 1,563 | 55 | 55 | |
tes | Tessaracoccus aquimaris | 3,263 | 1,635 | 53 | 52 | |
tez | Tessaracoccus sp. T2.5-30 | 2,838 | 1,644 | 53 | 53 | |
tdf | Tessaracoccus defluvii | 3,156 | 1,519 | 55 | 55 | |
tla | Tessaracoccus lapidicaptus | 2,921 | 1,680 | 56 | 52 | |
tej | Tessaracoccus palaemonis | 2,829 | 1,460 | 58 | 58 | |
tls | Tessaracoccus lacteus | 2,680 | 1,427 | 58 | ||
Raineyella | ||||||
rain | Raineyella fluvialis | 2,979 | 1,523 | 64 | 63 | |
Propioniciclava | ||||||
prv | Propioniciclava coleopterorum | 3,104 | 1,531 | 54 | 54 | |
brt | Propioniciclava sp. MC1595 | 3,200 | 1,623 | 54 | 54 | |
psoi | Propioniciclava soli | 3,369 | 1,647 | 54 | ||
Propionimicrobium | ||||||
prop | Propionimicrobium sp. PCR01-08-3 | 2,965 | 1,586 | 54 | 5 | |
Brooklawnia | ||||||
broo | Brooklawnia propionicigenes | 2,929 | 1,466 | 56 | 8 | |
Nocardioides | ||||||
nca | Nocardioides sp. JS614 | 4,909 | 2,302 | 55 | 54 | |
ndk | Nocardioides dokdonensis | 4,104 | 1,916 | 61 | 58 | |
noy | Nocardioides euryhalodurans | 3,774 | 1,784 | 54 | 54 | |
noi | Nocardioides jishulii | 3,233 | 1,561 | 63 | 63 | |
noo | Nocardioides sp. S-1144 | 4,011 | 1,830 | 54 | 53 | |
ndp | Nocardioides daphniae | 2,853 | 1,261 | 63 | 63 | |
nsn | Nocardioides seonyuensis | 3,728 | 1,789 | 55 | 55 | |
nbe | Nocardioides baekrokdamisoli | 2,942 | 1,403 | 52 | 52 | |
nano | Nocardioides anomalus | 4,914 | 2,116 | 57 | 52 | |
nmes | Nocardioides mesophilus | 4,074 | 1,861 | 55 | 55 | |
naro | Nocardioides aromaticivorans | 4,896 | 2,204 | 59 | 54 | |
npi | Nocardioides piscis | 3,474 | 1,566 | 56 | 56 | |
naqu | Nocardioides aquaticus | 4,432 | 1,857 | 57 | 52 | |
nro | Nocardioides rotundus | 3,883 | 1,853 | 56 | 55 | |
noq | Nocardioides okcheonensis | 4,242 | 1,827 | 54 | 54 | |
ncq | Nocardioides coralli | 3,397 | 1,584 | 54 | 54 | |
npc | Nocardioides panacisoli | 3,440 | 1,673 | 54 | 54 | |
nps | Nocardioides panacis | 4,459 | 1,892 | 55 | 55 | |
nmar | Nocardioides marmotae | 4,064 | 1,885 | 59 | 59 | |
nfc | Nocardioides faecalis | 3,529 | 1,649 | 58 | 58 | |
nrn | Nocardioides renjunii | 4,161 | 1,833 | 56 | ||
nbi | Nocardioides bizhenqiangii | 4,344 | 1,805 | 55 | ||
nof | Nocardioides sp. TF02-7 | 4,019 | 1,302 | 55 | ||
nocr | Nocardioides sp. Arc9.136 | 4,183 | 1,920 | 58 | ||
nocw | Nocardioides sp. WV_118_6 | 5,311 | 2,272 | 55 | ||
noca | Nocardioides sp. JQ2195 | 3,777 | 1,729 | 54 | ||
nocl | Nocardioides sp. LMS-CY | 4,988 | 2,254 | 56 | ||
nocd | Nocardioides sp. L-11A | 5,373 | 2,410 | 55 | ||
nocq | Nocardioides sp. QY071 | 5,429 | 2,305 | 55 | ||
Pimelobacter | ||||||
psim | Pimelobacter simplex | 5,427 | 2,246 | 54 | 54 | |
Aeromicrobium | ||||||
aer | Aeromicrobium erythreum | 3,124 | 1,612 | 54 | 54 | |
aez | Aeromicrobium chenweiae | 3,511 | 1,751 | 56 | 56 | |
aeb | Aeromicrobium sp. A1-2 | 3,252 | 1,669 | 56 | 56 | |
aef | Aeromicrobium yanjiei | 3,476 | 1,693 | 55 | 55 | |
asez | Aeromicrobium senzhongii | 2,993 | 1,467 | 56 | 2 | |
adb | Aeromicrobium duanguangcaii | 2,968 | 1,447 | 55 | ||
awn | Aeromicrobium wangtongii | 3,531 | 1,654 | 56 | ||
Micropruina | ||||||
mgg | Micropruina glycogenica | 3,941 | 1,640 | 63 | 52 | |
Mumia | ||||||
muz | Mumia sp. ZJ1417 | 3,954 | 1,885 | 55 | 55 | |
mqr | Mumia qirimensis | 4361 | 58 | |||
Solicola | ||||||
sgrg | Solicola gregarius | 4,635 | 1,974 | 51 | ||
unclassified Nocardioidaceae | ||||||
nbt | Nocardioidaceae bacterium TYQ2 | 3,378 | 1,513 | 55 | ||
Kribbella | ||||||
kfl | Kribbella flavida | 6,943 | 2,683 | 63 | 59 | |
kqi | Kribbella qitaiheensis | 6,796 | 2,571 | 72 | 61 | |
ksl | Kribbella soli | 8,304 | 3,052 | 62 | ||
kri | Kribbella sp. CA-293567 | 6,947 | 2,586 | 67 | ||
Thermobifida | ||||||
tfu | Thermobifida fusca | 3,110 | 1,540 | 67 | 67 | |
thao | Thermobifida halotolerans | 4,646 | 1,945 | 68 | 44 | |
talx | Thermobifida alba | 4,155 | 1,824 | 66 | 44 | |
Nocardiopsis | ||||||
nda | Nocardiopsis dassonvillei | 5,497 | 2,346 | 77 | 75 | |
nal | Nocardiopsis alba | 5,508 | 2,136 | 69 | 69 | |
ngv | Nocardiopsis gilva | 5,084 | 2,100 | 78 | 69 | |
nfe | Nocardiopsis flavescens | 1,072 | 357 | 18 | 11 | |
nex | Nocardiopsis exhalans | 6,637 | 2,371 | 78 | 48 | |
nec | Nocardiopsis eucommiae | 3,486 | 1,203 | 76 | 10 | |
nake | Nocardiopsis akebiae | 5,454 | 2,229 | 76 | 13 | |
ncg | Nocardiopsis changdeensis | 6,447 | 2,359 | 83 | 11 | |
Streptomonospora | ||||||
strr | Streptomonospora litoralis | 5,057 | 2,088 | 88 | 55 | |
snah | Streptomonospora nanhaiensis | 6,169 | 2,212 | 77 | 14 | |
Spiractinospora | ||||||
saiu | Spiractinospora alimapuensis | 5,218 | 2,154 | 61 | 39 | |
Thermomonospora | ||||||
tcu | Thermomonospora curvata | 4,890 | 2,046 | 76 | 74 | |
Actinomadura | ||||||
actw | Actinomadura sp. WMMB 499 | 7,864 | 2,982 | 110 | 90 | |
agra | Actinomadura graeca | 7,632 | 2,713 | 85 | 80 | |
amaz | Actinomadura madurae | 9,067 | 3,081 | 100 | 4 | |
acir | Actinomadura citrea | 8,249 | 3,009 | 87 | ||
Spirillospora | ||||||
spiq | Spirillospora sp. NBC_01491 | 7,511 | 2,644 | 88 | ||
Actinoallomurus | ||||||
actq | Actinoallomurus sp. NBC_01490 | 10,583 | 3,662 | 88 | ||
Streptosporangium | ||||||
sro | Streptosporangium roseum | 8,975 | 3,329 | 89 | 88 | |
Nonomuraea | ||||||
noa | Actinomadura parvosata subsp. kistnae | 11,340 | 4,001 | 82 | 69 | |
now | Nonomuraea phyllanthi | 9,798 | 3,737 | 78 | 63 | |
ncx | Nonomuraea coxensis | 8,398 | 3,138 | 93 | 49 | |
ngn | Nonomuraea gerenzanensis | 10,956 | 3,771 | 91 | 55 | |
nfs | Nonomuraea fuscirosea | 10,835 | 3,790 | 82 | ||
Thermobispora | ||||||
tbi | Thermobispora bispora | 3,546 | 1,751 | 66 | 66 | |
Microbispora | ||||||
mhai | Microbispora hainanensis | 7,771 | 2,864 | 75 | ||
Frankia | ||||||
fra | Frankia casuarinae | 4,499 | 1,865 | 59 | 53 | |
fal | Frankia alni | 6,678 | 2,184 | 63 | 53 | |
Parafrankia | ||||||
fre | Parafrankia sp. EAN1pec | 7,191 | 2,522 | 59 | 57 | |
Protofrankia | ||||||
fsy | Candidatus Protofrankia datiscae | 4,215 | 1,843 | 53 | 53 | |
Pseudofrankia | ||||||
fri | Pseudofrankia inefficax | 7,083 | 2,556 | 58 | 58 | |
Acidothermus | ||||||
ace | Acidothermus cellulolyticus | 2,157 | 1,262 | 53 | 50 | |
Nakamurella | ||||||
nml | Nakamurella multipartita | 5,240 | 2,271 | 56 | 56 | |
nak | Nakamurella antarctica | 2,873 | 1,432 | 59 | 54 | |
naka | Nakamurella sp. PAMC28650 | 4,851 | 2,012 | 56 | 1 | |
Geodermatophilus | ||||||
gob | Geodermatophilus obscurus | 4,811 | 2,070 | 59 | 58 | |
Blastococcus | ||||||
bsd | Blastococcus saxobsidens | 4,821 | 2,103 | 67 | 59 | |
blap | Blastococcus sp. PRF04-17 | 4,396 | 1,626 | 60 | 60 | |
bbrg | Blastococcus brunescens | 5,678 | 1,479 | 60 | ||
bmon | Blastococcus montanus | 4,034 | 1,882 | 61 | ||
Modestobacter | ||||||
mmar | Modestobacter italicus | 5,446 | 2,275 | 70 | 59 | |
mom | Modestobacter sp. L9-4 | 3,896 | 1,757 | 59 | 1 | |
Kineococcus | ||||||
kra | Kineococcus radiotolerans | 4,681 | 1,970 | 64 | 64 | |
Saccharopolyspora | ||||||
sen | Saccharopolyspora erythraea | 7,197 | 2,903 | 66 | 58 | |
sacg | Saccharopolyspora sp. ASAGF58 | 6,653 | 2,650 | 70 | 68 | |
Saccharomonospora | ||||||
svi | Saccharomonospora viridis | 3,828 | 1,907 | 58 | 58 | |
sacc | Saccharomonospora xinjiangensis | 4,338 | 1,914 | 67 | 58 | |
Amycolatopsis | ||||||
amd | Amycolatopsis mediterranei U32 | Ref | 9,228 | 3,209 | 64 | 64 |
amn | Amycolatopsis mediterranei S699 | 9,575 | 3,286 | 64 | 64 | |
amm | Amycolatopsis mediterranei S699 | 9,222 | 3,281 | 64 | 64 | |
amz | Amycolatopsis mediterranei RB | 9,224 | 3,279 | 64 | 64 | |
aoi | Amycolatopsis keratiniphila | 8,162 | 3,025 | 62 | 62 | |
aja | Amycolatopsis japonica | 8,422 | 3,076 | 67 | 67 | |
amq | Amycolatopsis methanolica | 7,074 | 2,847 | 60 | 60 | |
amyc | Amycolatopsis sp. AA4 | 8,252 | 3,090 | 71 | 68 | |
amyb | Amycolatopsis sp. BJA-103 | 8,306 | 3,019 | 70 | 68 | |
aab | Amycolatopsis albispora | 8,115 | 3,177 | 64 | 64 | |
amyy | Amycolatopsis sp. YIM 10 | 9,620 | 3,507 | 112 | 62 | |
aori | Amycolatopsis orientalis | 8,211 | 3,118 | 65 | 65 | |
aacd | Amycolatopsis acidiphila | 7,761 | 3,103 | 62 | ||
aprt | Amycolatopsis sp. FBCC-B4732 | 9,120 | 3,060 | 66 | 57 | |
aroo | Amycolatopsis roodepoortensis | 8,903 | 3,051 | 70 | 67 | |
athm | Amycolatopsis thermalba | 6,781 | 2,615 | 64 | 17 | |
arhd | Amycolatopsis rhabdoformis | 9,531 | 3,602 | 77 | ||
amog | Amycolatopsis mongoliensis | 10,050 | 3,505 | 70 | ||
acyn | Amycolatopsis cynarae | 7,092 | 2,653 | 74 | 1 | |
acor | Amycolatopsis coloradensis | 8,297 | 3,005 | 62 | 3 | |
amyz | Amycolatopsis sp. CA-230715 | 9,465 | 3,131 | 105 | ||
acab | Amycolatopsis carbonis | 9,447 | 3,324 | 85 | ||
anw | Amycolatopsis nalaikhensis | 9,857 | 3,366 | 73 | ||
amyd | Amycolatopsis sp. DSM 110486 | 10,233 | 3,669 | 85 | ||
abar | Amycolatopsis bartoniae | 7,218 | 2,850 | 61 | ||
amye | Amycolatopsis sp. EV170708-02-1 | 8,494 | 2,970 | 71 | ||
amys | Amycolatopsis sp. TNS106 | 8,051 | 2,943 | 87 | ||
Pseudonocardia | ||||||
pdx | Pseudonocardia dioxanivorans | 6,681 | 2,808 | 59 | 59 | |
psea | Pseudonocardia sp. AL041005-10 | 4,555 | 1,980 | 64 | 64 | |
psee | Pseudonocardia sp. EC080625-04 | 5,109 | 2,377 | 63 | 63 | |
pseh | Pseudonocardia sp. HH130629-09 | 5,010 | 2,349 | 59 | 59 | |
pseq | Pseudonocardia sp. EC080610-09 | 5,892 | 2,678 | 65 | 65 | |
pecq | Pseudonocardia sp. EC080619-01 | 5,970 | 2,720 | 64 | 64 | |
phh | Pseudonocardia sp. HH130630-07 | 5,906 | 2,497 | 60 | 60 | |
paut | Pseudonocardia autotrophica | 7,132 | 3,015 | 83 | 63 | |
pbro | Pseudonocardia broussonetiae | 6,861 | 2,819 | 55 | 52 | |
ppel | Pseudonocardia petroleophila | 6,174 | 2,312 | 56 | 3 | |
psds | Pseudonocardia sp. DSM 110487 | 9,543 | 3,645 | 56 | ||
Actinosynnema | ||||||
apre | Actinosynnema pretiosum | 6,695 | 2,559 | 76 | 70 | |
ami | Actinosynnema mirum | 6,916 | 2,613 | 79 | 75 | |
Saccharothrix | ||||||
sesp | Saccharothrix espanaensis | 8,427 | 2,824 | 68 | 64 | |
ssyi | Saccharothrix syringae | 8,863 | 3,129 | 69 | 58 | |
sacx | Saccharothrix sp. 6-C | 7,704 | 1,978 | 66 | ||
Kutzneria | ||||||
kal | Kutzneria albida | 8,820 | 3,201 | 56 | 56 | |
kut | Kutzneria sp. CA-103260 | 10,311 | 3,431 | 80 | 8 | |
kbr | Kutzneria buriramensis | 10,862 | 3,465 | 67 | ||
Kibdelosporangium | ||||||
kphy | Kibdelosporangium phytohabitans | 10,205 | 3,496 | 83 | 81 | |
Lentzea | ||||||
led | Lentzea guizhouensis | 8,927 | 3,024 | 85 | 68 | |
Actinoalloteichus | ||||||
ahm | Actinoalloteichus hymeniacidonis | 5,346 | 2,203 | 73 | 52 | |
acti | Actinoalloteichus sp. GBA129-24 | 6,178 | 2,382 | 80 | 55 | |
acad | Actinoalloteichus fjordicus | 5,952 | 2,360 | 78 | 54 | |
ahg | Actinoalloteichus hoggarensis | 5,521 | 2,221 | 82 | 53 | |
acta | Actinoalloteichus sp. AHMU CJ021 | 5,067 | 2,155 | 65 | 56 | |
Alloactinosynnema | ||||||
alo | Alloactinosynnema sp. L-07 | 7,284 | 2,402 | 58 | 51 | |
Prauserella | ||||||
pmad | Prauserella marina | 6,374 | 2,756 | 59 | 53 | |
Allosaccharopolyspora | ||||||
sace | Allosaccharopolyspora coralli | 4,328 | 2,049 | 64 | 64 | |
Actinokineospora | ||||||
actu | Actinokineospora sp. UTMC 2448 | 6,398 | 2,236 | 76 | 51 | |
Crossiella | ||||||
cros | Crossiella sp. CA-258035 | 8,206 | 2,903 | 64 | 7 | |
Actinomycetospora | ||||||
acty | Actinomycetospora sp. NBC_00405 | 5,817 | 2,225 | 59 | ||
Umezawaea | ||||||
ume | Umezawaea sp. Da 62-37 | 10,321 | 3,172 | 83 | ||
Salinispora | ||||||
stp | Salinispora tropica | 4,536 | 2,020 | 61 | 61 | |
saq | Salinispora arenicola | 4,917 | 2,156 | 64 | 62 | |
Micromonospora | ||||||
mau | Micromonospora aurantiaca | 6,222 | 2,515 | 64 | 64 | |
mil | Micromonospora sp. L5 | 6,150 | 2,539 | 65 | 63 | |
micb | Micromonospora sp. B006 | 6,251 | 2,561 | 61 | 54 | |
mtua | Micromonospora tulbaghiae | 6,440 | 2,564 | 65 | 58 | |
mich | Micromonospora sp. HM134 | 6,289 | 2,552 | 68 | 55 | |
mtem | Micromonospora terminaliae | 6,096 | 2,463 | 69 | 61 | |
mcab | Micromonospora carbonacea | 6,136 | 2,553 | 66 | 52 | |
msag | Micromonospora sagamiensis | 5,896 | 2,447 | 91 | 49 | |
vma | Micromonospora maris | 6,009 | 2,432 | 57 | 56 | |
mcra | Micromonospora craniellae | 5,793 | 2,431 | 63 | 52 | |
ver | Verrucosispora sp. NA02020 | 6,324 | 2,628 | 66 | 54 | |
meno | Micromonospora endophytica | 6,401 | 2,216 | 72 | 8 | |
mchl | Micromonospora chalcea | 6,113 | 2,473 | 63 | 8 | |
mfeu | Micromonospora robiginosa | 5,859 | 2,321 | 76 | 3 | |
mprn | Micromonospora profundi | 6,067 | 2,403 | 62 | 2 | |
mhaw | Micromonospora halotolerans | 6,369 | 2,434 | 67 | 1 | |
mcay | Micromonospora cathayae | 6,161 | 2,386 | 62 | 1 | |
micf | Micromonospora sp. FIMYZ51 | 6,076 | 2,341 | 65 | 1 | |
Actinoplanes | ||||||
ase | Actinoplanes sp. SE50/110 | 8,256 | 2,776 | 231 | 114 | |
ams | Actinoplanes missouriensis | 8,125 | 2,973 | 79 | 79 | |
actn | Actinoplanes sp. N902-109 | 8,212 | 2,879 | 71 | 71 | |
acts | Actinoplanes sp. SE50 | 8,252 | 2,774 | 114 | 108 | |
aih | Actinoplanes ianthinogenes | 9,182 | 2,981 | 115 | 65 | |
actr | Actinoplanes sp. NBRC 14428 | 8,053 | 2,446 | 87 | 57 | |
actl | Actinoplanes sp. L3-i22 | 10,740 | 3,346 | 123 | 10 | |
asic | Actinoplanes sichuanensis | 11,223 | 3,357 | 119 | 1 | |
aou | Actinoplanes oblitus | 8,588 | 2,876 | 93 | ||
acte | Actinoplanes sp. OR16 | 8,566 | 2,998 | 98 | ||
afs | Actinoplanes friuliensis | 8,565 | 3,063 | 82 | 77 | |
Plantactinospora | ||||||
plk | Plantactinospora sp. KBS50 | 5,196 | 2,224 | 58 | 58 | |
plab | Plantactinospora sp. BC1 | 6,958 | 2,831 | 73 | 52 | |
plat | Plantactinospora sp. BB1 | 6,999 | 2,858 | 72 | 53 | |
Phytohabitans | ||||||
pfla | Phytohabitans flavus | 9,097 | 3,110 | 98 | 51 | |
psuu | Phytohabitans suffuscus | 9,431 | 3,335 | 77 | 48 | |
Actinocatenispora | ||||||
atl | Actinocatenispora thailandica | 6,846 | 2,508 | 117 | 51 | |
aser | Actinocatenispora sera | 6,605 | 2,332 | 106 | 55 | |
Polymorphospora | ||||||
pry | Polymorphospora rubra | 7,477 | 2,761 | 87 | 42 | |
Catellatospora | ||||||
cati | Catellatospora sp. IY07-71 | 7,753 | 2,816 | 94 | 53 | |
Dactylosporangium | ||||||
dvc | Dactylosporangium vinaceum | 10,458 | 3,384 | 89 | 60 | |
dfu | Dactylosporangium fulvum | 9,403 | 2,849 | 81 | 57 | |
dros | Dactylosporangium roseum | 7,442 | 2,252 | 78 | 56 | |
daur | Dactylosporangium aurantiacum | 10,021 | 2,792 | 96 | 64 | |
dmat | Dactylosporangium matsuzakiense | 9,385 | 2,788 | 90 | 7 | |
dact | Dactylosporangium sp. AC04546 | 11,765 | 3,963 | 100 | ||
Natronosporangium | ||||||
nhy | Natronosporangium hydrolyticum | 5,037 | 2,151 | 57 | 43 | |
Couchioplanes | ||||||
ccaz | Couchioplanes caeruleus | 7,572 | 2,702 | 64 | 53 | |
Catenulispora | ||||||
cai | Catenulispora acidiphila | 8,914 | 3,160 | 72 | 67 | |
Stackebrandtia | ||||||
sna | Stackebrandtia nassauensis | 6,379 | 2,368 | 55 | 53 | |
Natronoglycomyces | ||||||
nav | Natronoglycomyces albus | 3,365 | 1,484 | 61 | 38 | |
Glycomyces | ||||||
gly | Glycomyces sp. TRM65418 | 4,547 | 1,867 | 51 | 40 | |
Arcanobacterium | ||||||
ahe | Arcanobacterium haemolyticum | 1,731 | 1,046 | 64 | 64 | |
arca | Arcanobacterium buesumense | 1,694 | 1,018 | 65 | 52 | |
apho | Arcanobacterium phocisimile | 1,711 | 1,028 | 65 | 53 | |
apii | Arcanobacterium pinnipediorum | 1,647 | 845 | 65 | 39 | |
awl | Arcanobacterium wilhelmae | 1,700 | 965 | 59 | 15 | |
acas | Arcanobacterium canis | 1,621 | 933 | 61 | 13 | |
ahx | Arcanobacterium hippocoleae | 2,182 | 815 | 55 | ||
Mobiluncus | ||||||
mcu | Mobiluncus curtisii | 1,909 | 1,090 | 57 | 55 | |
Trueperella | ||||||
tpy | Trueperella pyogenes TP6375 | 1,984 | 1,213 | 53 | 53 | |
tpyo | Trueperella pyogenes TP8 | 2,001 | 1,201 | 50 | 49 | |
tbw | Trueperella bialowiezensis | 1,821 | 1,042 | 53 | 50 | |
tpec | Trueperella pecoris | 1,988 | 1,146 | 61 | 43 | |
tber | Trueperella bernardiae | 1,833 | 1,080 | 56 | 2 | |
Actinotignum | ||||||
asg | Actinotignum schaalii | 1,444 | 884 | 56 | 56 | |
auu | Actinotignum urinale | 1,460 | 848 | 57 | 12 | |
atim | Actinotignum timonense | 1,853 | 1,029 | 57 | 1 | |
Actinobaculum | ||||||
actt | Actinobaculum sp. 313 | 2,119 | 1,053 | 55 | 52 | |
Schaalia | ||||||
amy | Schaalia meyeri | 1,667 | 999 | 57 | 57 | |
soo | Schaalia odontolytica | 1,974 | 1,110 | 61 | 61 | |
stuc | Schaalia turicensis | 1,578 | 960 | 60 | 60 | |
Actinomyces | ||||||
acq | Actinomyces sp. oral taxon 414 | 2,616 | 1,288 | 59 | 59 | |
aos | Actinomyces oris | 2,336 | 1,304 | 62 | 62 | |
ard | Actinomyces radicidentis | 2,342 | 1,347 | 62 | 61 | |
actp | Actinomyces gaoshouyii | 1,887 | 1,130 | 63 | 63 | |
actc | Actinomyces sp. Chiba101 | 2,364 | 1,304 | 60 | 60 | |
acto | Actinomyces sp. oral taxon 897 | 2,315 | 1,218 | 62 | 62 | |
ane | Actinomyces naeslundii | 2,732 | 1,283 | 62 | 56 | |
ahw | Actinomyces howellii | 2,568 | 1,337 | 69 | 56 | |
actz | Actinomyces sp. 432 | 2,329 | 1,220 | 61 | 49 | |
air | Actinomyces israelii | 3,198 | 1,559 | 64 | ||
asla | Actinomyces slackii | 2,602 | 1,415 | 67 | 52 | |
avc | Actinomyces viscosus | 2,916 | 1,445 | 64 | 52 | |
awe | Actinomyces weissii | 1,943 | 1,103 | 66 | 58 | |
amam | Actinomyces marmotae | 1,889 | 1,139 | 63 | 56 | |
arep | Actinomyces respiraculi | 2,334 | 1,305 | 61 | 53 | |
agh | Actinomyces graevenitzii | 1,722 | 751 | 65 | 42 | |
actm | Actinomyces sp. zg-332 | 1,183 | 558 | 54 | 42 | |
amas | Actinomyces massiliensis | 2,865 | 1,353 | 62 | 2 | |
acap | Actinomyces capricornis | 2,606 | 1,293 | 69 | ||
auo | Actinomyces urogenitalis | 2,157 | 1,225 | 63 | 3 | |
alil | Actinomyces lilanjuaniae | 2,195 | 1,054 | 61 | 1 | |
acth | Actinomyces sp. HMT897 | 2,407 | 1,187 | 63 | 1 | |
achn | Actinomyces sp. HMT 175 | 2,408 | 1,281 | 63 | 1 | |
Boudabousia | ||||||
avu | Boudabousia tangfeifanii | 1,715 | 975 | 61 | 61 | |
Flaviflexus | ||||||
fsl | Flaviflexus salsibiostraticola | 2,332 | 1,317 | 58 | 48 | |
flh | Flaviflexus ciconiae | 2,337 | 1,261 | 58 | 50 | |
Nanchangia | ||||||
wik | Nanchangia anserum | 1,593 | 932 | 62 | 47 | |
Winkia | ||||||
wne | Winkia neuii subsp. anitrata | 2,041 | 911 | 63 | 9 | |
Gleimia | ||||||
geu | Gleimia europaea | 1,827 | 1,026 | 62 | 14 | |
ghm | Gleimia hominis | 1,785 | 1,066 | 61 | 11 | |
Varibaculum | ||||||
vcb | Varibaculum cambriense | 1,991 | 944 | 55 | 7 | |
Pauljensenia | ||||||
phon | Pauljensenia hongkongensis | 1,597 | 803 | 46 | ||
Scrofimicrobium | ||||||
sapp | Scrofimicrobium appendicitidis | 1,958 | 1,190 | 57 | ||
Buchananella | ||||||
bfy | Buchananella felis | 1,776 | 999 | 60 | ||
Bifidobacterium | ||||||
blo | Bifidobacterium longum NCC2705 | Ref | 1,729 | 995 | 70 | 68 |
blj | Bifidobacterium longum DJO10A | 2,000 | 1,052 | 72 | 72 | |
bln | Bifidobacterium longum subsp. infantis ATCC 15697 (JGI) | 2,416 | 1,214 | 94 | 93 | |
blon | Bifidobacterium longum subsp. infantis ATCC 15697 (Tokyo) | 2,552 | 1,207 | 89 | 89 | |
blf | Bifidobacterium longum subsp. infantis 157F | 1,999 | 1,061 | 71 | 71 | |
bll | Bifidobacterium longum subsp. longum JDM301 | 1,959 | 1,123 | 64 | 64 | |
blb | Bifidobacterium longum subsp. longum BBMN68 | 1,806 | 1,039 | 64 | 64 | |
blm | Bifidobacterium longum subsp. longum JCM 1217 | 1,924 | 1,044 | 85 | 85 | |
blk | Bifidobacterium longum subsp. longum KACC 91563 | 1,985 | 1,050 | 65 | 65 | |
blg | Bifidobacterium longum subsp. longum F8 | 1,682 | 900 | 62 | 61 | |
blz | Bifidobacterium longum subsp. longum GT15 | 1,893 | 1,049 | 70 | 66 | |
blx | Bifidobacterium longum BXY01 | 1,901 | 1,119 | 65 | 65 | |
bad | Bifidobacterium adolescentis ATCC 15703 | 1,631 | 973 | 69 | 69 | |
badl | Bifidobacterium adolescentis 22L | 1,725 | 1,024 | 67 | 67 | |
bado | Bifidobacterium adolescentis BBMN23 | 1,823 | 1,042 | 68 | 68 | |
bfj | Bifidobacterium adolescentis JCM 19861 | 1,884 | 1,005 | 72 | ||
bla | Bifidobacterium animalis subsp. lactis AD011 | 1,528 | 952 | 59 | 59 | |
blc | Bifidobacterium animalis subsp. lactis Bl-04 | 1,567 | 964 | 64 | 64 | |
blt | Bifidobacterium animalis subsp. lactis DSM 10140 | 1,566 | 961 | 63 | 63 | |
bbb | Bifidobacterium animalis subsp. lactis BB-12 | 1,537 | 971 | 67 | 64 | |
bbc | Bifidobacterium animalis subsp. lactis BLC1 | 1,518 | 966 | 64 | 64 | |
bnm | Bifidobacterium animalis subsp. lactis CNCM I-2494 | 1,660 | 938 | 64 | 64 | |
blv | Bifidobacterium animalis subsp. lactis V9 | 1,572 | 969 | 64 | 64 | |
blw | Bifidobacterium animalis subsp. lactis B420 | 1,561 | 963 | 64 | 64 | |
bls | Bifidobacterium animalis subsp. lactis Bi-07 | 1,597 | 962 | 64 | 64 | |
bani | Bifidobacterium animalis subsp. lactis Bl12 | 1,544 | 966 | 67 | ||
banl | Bifidobacterium animalis subsp. lactis ATCC 27673 | 1,556 | 962 | 64 | 64 | |
bni | Bifidobacterium animalis subsp. animalis ATCC 25527 | 1,538 | 955 | 59 | 59 | |
banm | Bifidobacterium animalis RH | 1,539 | 966 | 61 | 61 | |
bde | Bifidobacterium dentium Bd1 | 2,129 | 1,204 | 68 | 68 | |
bdn | Bifidobacterium dentium JCM 1195 = DSM 20436 | 2,141 | 1,214 | 68 | 67 | |
bbp | Bifidobacterium bifidum PRL2010 | 1,707 | 978 | 61 | 61 | |
bbi | Bifidobacterium bifidum S17 | 1,784 | 974 | 62 | 62 | |
bbf | Bifidobacterium bifidum BGN4 | 1,835 | 976 | 61 | 61 | |
bbv | Bifidobacterium breve ACS-071-V-Sch8b | 1,826 | 1,092 | 65 | 65 | |
bbru | Bifidobacterium breve UCC2003 | 1,854 | 1,100 | 60 | 60 | |
bbre | Bifidobacterium breve 12L | 1,810 | 1,061 | 61 | ||
bbrv | Bifidobacterium breve 689b | 1,821 | 1,094 | 58 | 58 | |
bbrj | Bifidobacterium breve JCM 7017 | 1,770 | 1,078 | 58 | 58 | |
bbrc | Bifidobacterium breve JCM 7019 | 1,915 | 1,111 | 61 | 61 | |
bbrn | Bifidobacterium breve NCFB 2258 | 1,834 | 1,114 | 58 | 58 | |
bbrs | Bifidobacterium breve S27 | 1,748 | 1,088 | 61 | 61 | |
bbrd | Bifidobacterium breve DSM 20213 = JCM 1192 | 1,929 | 1,088 | 59 | 59 | |
bast | Bifidobacterium asteroides | 1,658 | 1,039 | 50 | 50 | |
btp | Bifidobacterium thermophilum | 1,845 | 1,009 | 59 | 59 | |
bcor | Bifidobacterium coryneforme | 1,364 | 891 | 54 | 54 | |
bii | Bifidobacterium indicum | 1,350 | 886 | 56 | 56 | |
bka | Bifidobacterium catenulatum PV20-2 | 1,875 | 1,097 | 75 | 75 | |
bks | Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854 | 1,945 | 1,093 | 69 | 69 | |
bcat | Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043 | 1,710 | 995 | 70 | 70 | |
bpsp | Bifidobacterium pseudolongum | 1,577 | 944 | 66 | 66 | |
bang | Bifidobacterium angulatum | 1,585 | 957 | 65 | 65 | |
bpsc | Bifidobacterium pseudocatenulatum | 1,841 | 1,088 | 72 | 72 | |
bsca | Bifidobacterium scardovii | 2,572 | 1,405 | 65 | 65 | |
bact | Bifidobacterium actinocoloniiforme | 1,296 | 805 | 54 | 54 | |
bcho | Bifidobacterium choerinum | 1,738 | 931 | 68 | 65 | |
bgx | Bifidobacterium pullorum subsp. gallinarum | 1,956 | 1,073 | 69 | 55 | |
blem | Bifidobacterium lemurum | 2,259 | 1,236 | 61 | 48 | |
beu | Bifidobacterium eulemuris | 2,260 | 1,219 | 61 | 49 | |
bsue | Bifidobacterium subtile | 2,187 | 1,266 | 55 | 45 | |
baqk | Bifidobacterium aquikefiricola | 1,917 | 1,102 | 54 | ||
bfk | Bifidobacterium fermentum | 1,924 | 1,129 | 52 | ||
Gardnerella | ||||||
gvg | Gardnerella vaginalis ATCC 14019 | 1,365 | 826 | 56 | 54 | |
gva | Gardnerella vaginalis 409-05 | 1,258 | 756 | 54 | 54 | |
gvh | Gardnerella vaginalis HMP9231 | 1,317 | 826 | 54 | 54 | |
gpt | Gardnerella piotii | 1,145 | 694 | 54 | 45 | |
gsw | Gardnerella swidsinskii | 1,194 | 731 | 54 | 45 | |
Scardovia | ||||||
sij | Scardovia inopinata | 1,445 | 862 | 52 | 51 | |
Parascardovia | ||||||
pdo | Parascardovia denticolens | 1,548 | 838 | 51 | 51 | |
Bombiscardovia | ||||||
bapk | Bombiscardovia apis | 1,549 | 775 | 54 | ||
bnk | Bombiscardovia nodaiensis | 1,796 | 895 | 53 | ||
Actinopolyspora | ||||||
aey | Actinopolyspora erythraea | 4,396 | 1,958 | 72 | 58 | |
Planktophila | ||||||
plan | Candidatus Planktophila lacus | 1,433 | 956 | 47 | 46 | |
plak | Candidatus Planktophila dulcis | 1,359 | 923 | 46 | 46 | |
plim | Candidatus Planktophila limnetica | 1,328 | 917 | 47 | 46 | |
psuf | Candidatus Planktophila sulfonica | 1,334 | 924 | 43 | 43 | |
pvs | Candidatus Planktophila versatilis | 1,324 | 905 | 44 | 44 | |
pvn | Candidatus Planktophila vernalis | 1,354 | 931 | 45 | 43 | |
Nanopelagicus | ||||||
abam | Candidatus Nanopelagicus limnes | 1,220 | 816 | 44 | 44 | |
nhi | Candidatus Nanopelagicus hibericus | 1,211 | 804 | 44 | 44 | |
nab | Candidatus Nanopelagicus abundans | 1,145 | 797 | 45 | 45 | |
Epidermidibacterium | ||||||
eke | Epidermidibacterium keratini | 3,736 | 1,775 | 53 | 49 | |
Jatrophihabitans | ||||||
jtl | Jatrophihabitans telluris | 3,751 | 1,734 | 53 | 46 | |
jcy | Jatrophihabitans cynanchi | 4,270 | 1,899 | 55 | 1 | |
unclassified Actinomycetes | ||||||
abai | Actinobacteria bacterium | 2,299 | 1,127 | 49 | 33 | |
Rubrobacter | ||||||
rxy | Rubrobacter xylanophilus | 3,140 | 1,734 | 64 | 52 | |
rrd | Rubrobacter radiotolerans | 3,161 | 1,634 | 49 | 45 | |
rub | Rubrobacter tropicus | 4,356 | 1,937 | 55 | 46 | |
rmar | Rubrobacter marinus | 4,019 | 1,584 | 53 | 12 | |
Baekduia | ||||||
bsol | Baekduia soli | 4,799 | 1,974 | 51 | 20 | |
bala | Baekduia alba | 5,762 | 2,182 | 70 | 3 | |
Svornostia | ||||||
pbaj | Svornostia abyssi | 4,876 | 1,640 | 51 | ||
Conexibacter | ||||||
cwo | Conexibacter woesei | 5,914 | 2,621 | 51 | 51 | |
Paraconexibacter | ||||||
parn | Paraconexibacter antarcticus | 4,902 | 1,910 | 54 | 12 | |
parq | Paraconexibacter sp. AEG42_29 | 5,381 | 1,960 | 65 | ||
Capillimicrobium | ||||||
sbae | Capillimicrobium parvum | 5,693 | 1,584 | 65 | 7 | |
Thermoleophilum | ||||||
talu | Thermoleophilum album | 1,925 | 1,047 | 52 | 4 | |
Acidimicrobium | ||||||
afo | Acidimicrobium ferrooxidans | 1,964 | 1,140 | 57 | 56 | |
Ilumatobacter | ||||||
aym | Ilumatobacter coccineus | 4,291 | 1,798 | 55 | 54 | |
Actinomarinicola | ||||||
atq | Actinomarinicola tropica | 3,566 | 1,676 | 51 | 46 | |
Aquihabitans | ||||||
aqz | Aquihabitans sp. G128 | 4,542 | 1,788 | 52 | 21 | |
Iamia | ||||||
iam | Iamia sp. SCSIO 61187 | 4,914 | 1,845 | 51 | 22 | |
ima | Iamia majanohamensis | 4,275 | 1,294 | 53 | 1 | |
Dermatobacter | ||||||
dhi | Dermatobacter hominis | 4,265 | 1,721 | 51 | ||
Cyanobacteriota | ||||||
Synechocystis | ||||||
syn | Synechocystis sp. PCC 6803 | Ref | 3,564 | 1,618 | 50 | 47 |
syz | Synechocystis sp. PCC 6803 | 3,561 | 1,617 | 49 | 48 | |
syy | Synechocystis sp. PCC 6803 GT-S | 3,171 | 1,559 | 49 | 48 | |
syt | Synechocystis sp. PCC 6803 GT-I | 3,170 | 1,559 | 49 | 48 | |
sys | Synechocystis sp. PCC 6803 PCC-N | 3,169 | 1,558 | 49 | 48 | |
syq | Synechocystis sp. PCC 6803 PCC-P | 3,169 | 1,559 | 49 | 48 | |
syj | Synechocystis sp. PCC 6714 | 3,800 | 1,568 | 48 | 48 | |
syo | Synechocystis sp. IPPAS B-1465 | 3,574 | 1,626 | 51 | 50 | |
synh | Synechocystis sp. PCC 7338 | 3,385 | 1,575 | 52 | ||
syns | Synechocystis sp. LKSZ1 | 3,285 | 1,528 | 49 | ||
Synechococcus | ||||||
syc | Synechococcus elongatus PCC6301 | Ref | 2,525 | 1,371 | 55 | 54 |
syu | Synechococcus elongatus UTEX 2973 | 2,645 | 1,387 | 51 | 51 | |
syf | Synechococcus elongatus PCC7942 | Ref | 2,661 | 1,395 | 53 | 53 |
syd | Synechococcus sp. CC9605 | 2,638 | 1,273 | 54 | 54 | |
sye | Synechococcus sp. CC9902 | 2,304 | 1,226 | 51 | 50 | |
syg | Synechococcus sp. CC9311 | 2,892 | 1,306 | 52 | 51 | |
syr | Synechococcus sp. RCC307 | 2,535 | 1,263 | 48 | 48 | |
syx | Synechococcus sp. WH 7803 | 2,533 | 1,296 | 53 | 53 | |
cya | Synechococcus sp. JA-3-3Ab | 2,760 | 1,457 | 55 | 55 | |
cyb | Synechococcus sp. JA-2-3B'a(2-13) | 2,862 | 1,488 | 52 | 52 | |
syne | Synechococcus sp. PCC 6312 | 3,545 | 1,531 | 48 | 46 | |
synp | Synechococcus sp. PCC 7502 | 3,318 | 1,483 | 51 | 50 | |
synk | Synechococcus sp. KORDI-100 | 3,061 | 1,296 | 44 | 44 | |
synr | Synechococcus sp. KORDI-49 | 2,734 | 1,285 | 49 | 49 | |
synd | Synechococcus sp. KORDI-52 | 2,820 | 1,282 | 55 | 55 | |
syh | Synechococcus sp. WH 8109 | 2,644 | 1,172 | 53 | 51 | |
synw | Synechococcus sp. WH 8103 | 2,822 | 1,272 | 52 | 46 | |
sync | Synechococcus sp. CB0101 | 2,876 | 1,421 | 59 | 48 | |
syny | Synechococcus sp. SynAce01 | 2,651 | 1,209 | 54 | 19 | |
synz | Synechococcus sp. CBW1002 | 3,477 | 1,512 | 59 | ||
synl | Synechococcus sp. LA31 | 2,889 | 1,355 | 59 | ||
syno | Synechococcus sp. NB0720_010 | 2,515 | 1,268 | 59 | ||
synu | Synechococcus sp. WH 8101 | 2,808 | 1,345 | 51 | ||
Parasynechococcus | ||||||
syw | Parasynechococcus marenigrum | 2,517 | 1,280 | 55 | 53 | |
Cyanobium | ||||||
cgc | Cyanobium gracile | 3,280 | 1,555 | 54 | 52 | |
cyi | Cyanobium sp. NIES-981 | 3,264 | 1,504 | 60 | 50 | |
Prochlorococcus | ||||||
pma | Prochlorococcus marinus subsp. marinus CCMP1375 | Ref | 1,882 | 993 | 46 | 44 |
pmm | Prochlorococcus marinus subsp. pastoris CCMP1986 | 1,948 | 1,017 | 82 | 43 | |
pmt | Prochlorococcus marinus MIT 9313 | 2,850 | 1,207 | 58 | 53 | |
pmn | Prochlorococcus marinus NATL2A | 2,163 | 1,036 | 44 | 44 | |
pmi | Prochlorococcus marinus MIT 9312 | 1,962 | 1,032 | 45 | 43 | |
pmb | Prochlorococcus marinus AS9601 | 1,921 | 1,017 | 43 | 42 | |
pmc | Prochlorococcus marinus MIT 9515 | 1,906 | 998 | 42 | 42 | |
pmf | Prochlorococcus marinus MIT 9303 | 2,997 | 1,232 | 52 | 52 | |
pmg | Prochlorococcus marinus MIT 9301 | 1,907 | 1,016 | 42 | 42 | |
pmh | Prochlorococcus marinus MIT 9215 | 1,983 | 1,020 | 42 | 41 | |
pmj | Prochlorococcus marinus MIT 9211 | 1,855 | 1,013 | 45 | 45 | |
pme | Prochlorococcus marinus NATL1A | 2,193 | 1,033 | 43 | 43 | |
prc | Prochlorococcus sp. MIT 0604 | 2,063 | 1,029 | 39 | 39 | |
prm | Prochlorococcus sp. MIT 0801 | 2,287 | 1,038 | 43 | 41 | |
Woronichinia | ||||||
wna | Woronichinia naegeliana | 6,589 | 1,625 | 52 | 17 | |
Chamaesiphon | ||||||
cmp | Chamaesiphon minutus | 5,945 | 2,046 | 81 | 52 | |
Cyanothece | ||||||
cyn | Cyanothece sp. PCC 7425 | 5,327 | 2,015 | 57 | 55 | |
Crinalium | ||||||
cep | Crinalium epipsammum | 4,752 | 1,819 | 57 | 55 | |
Thermostichus | ||||||
tvn | Thermostichus vulcanus | 2,496 | 1,332 | 44 | 42 | |
Parathermosynechococcus | ||||||
slw | Parathermosynechococcus lividus | 2,262 | 1,240 | 48 | 43 | |
Thermosynechococcus | ||||||
tel | Thermosynechococcus vestitus | Ref | 2,475 | 1,335 | 49 | 44 |
thn | Thermosynechococcus sp. NK55 | 2,232 | 1,279 | 46 | 44 | |
thec | Thermosynechococcus sp. CL-1 | 2,465 | 1,329 | 48 | 42 | |
they | Thermosynechococcus sp. TA-1 | 2,524 | 1,324 | 49 | ||
tsq | Thermosynechococcus sichuanensis | 2,507 | 1,354 | 48 | ||
Acaryochloris | ||||||
amr | Acaryochloris marina | 8,383 | 2,371 | 79 | 76 | |
acam | Acaryochloris sp. 'Moss Beach' | 5,843 | 1,904 | 75 | ||
Trichothermofontia | ||||||
tsz | Trichothermofontia sichuanensis | 3,659 | 1,548 | 55 | 1 | |
Leptolyngbya | ||||||
len | Leptolyngbya sp. NIES-3755 | 6,635 | 2,262 | 77 | 45 | |
let | Leptolyngbya sp. O-77 | 4,865 | 1,891 | 52 | 50 | |
lbo | Leptolyngbya boryana | 6,348 | 2,217 | 74 | 40 | |
lept | Leptolyngbya sp. 7M | 7,020 | 2,123 | 88 | 3 | |
lepv | Leptolyngbya sp. 15MV | 5,299 | 2,103 | 86 | 8 | |
lepb | Leptolyngbya sp. BL0902 | 4,403 | 1,699 | 49 | ||
lepi | Leptolyngbya sp. IPPAS B-1204 | 5,797 | 1,151 | 81 | ||
Kovacikia | ||||||
kov | Kovacikia minuta | 7,246 | 2,080 | 124 | 38 | |
Leptodesmis | ||||||
lsc | Leptodesmis sichuanensis | 4,809 | 1,740 | 55 | 36 | |
Leptothermofonsia | ||||||
lsk | Leptothermofonsia sichuanensis | 5,272 | 1,954 | 85 | ||
Stenomitos | ||||||
sfri | Stenomitos frigidus | 5,652 | 1,889 | 59 | ||
Halomicronema | ||||||
hhg | Halomicronema hongdechloris | 5,271 | 1,849 | 52 | 47 | |
Dactylococcopsis | ||||||
dsl | Dactylococcopsis salina | 3,337 | 1,552 | 90 | 53 | |
Pseudanabaena | ||||||
pseu | Pseudanabaena sp. PCC 7367 | 3,854 | 1,586 | 55 | 54 | |
pser | Pseudanabaena sp. ABRG5-3 | 4,986 | 1,849 | 66 | 49 | |
pgx | Pseudanabaena galeata | 5,176 | 1,787 | 54 | 1 | |
Thermoleptolyngbya | ||||||
theu | Thermoleptolyngbya sichuanensis | 4,402 | 1,833 | 55 | 47 | |
tog | Thermoleptolyngbya oregonensis | 4,244 | 1,750 | 56 | 1 | |
Thermocoleostomius | ||||||
tsin | Thermocoleostomius sinensis | 4,914 | 1,959 | 60 | 1 | |
Gloeocapsa | ||||||
glp | Gloeocapsa sp. PCC 7428 | 5,011 | 2,136 | 50 | 49 | |
Chondrocystis | ||||||
chon | Chondrocystis sp. NIES-4102 | 4,394 | 1,886 | 51 | 41 | |
Gloeocapsopsis | ||||||
gdu | Gloeocapsopsis dulcis | 5,175 | 1,986 | 52 | ||
Geminocystis | ||||||
gen | Geminocystis sp. NIES-3709 | 3,937 | 1,584 | 48 | 41 | |
gee | Geminocystis sp. NIES-3708 | 3,639 | 1,656 | 49 | 44 | |
Cyanobacterium | ||||||
can | Cyanobacterium aponinum | 3,431 | 1,679 | 55 | 54 | |
csn | Cyanobacterium stanieri | 2,837 | 1,495 | 55 | 54 | |
cyl | Cyanobacterium sp. HL-69 | 2,947 | 1,468 | 62 | 49 | |
cyr | Cyanobacterium sp. IPPAS B-1200 | 3,129 | 1,507 | 54 | ||
Picosynechococcus | ||||||
syp | Picosynechococcus sp. PCC 7002 | 3,186 | 1,574 | 49 | 49 | |
syv | Picosynechococcus sp. PCC 73109 | 3,046 | 1,533 | 52 | 48 | |
syl | Picosynechococcus sp. PCC 7003 | 3,069 | 1,546 | 52 | 46 | |
lep | Leptolyngbya sp. PCC 7376 | 4,228 | 1,735 | 53 | 50 | |
synn | Synechococcus sp. NIES-970 | 2,943 | 1,473 | 51 | ||
pip | Picosynechococcus sp. PCC 11901 | 3,171 | 1,526 | 52 | ||
Microcystis | ||||||
mar | Microcystis aeruginosa | 6,311 | 1,979 | 52 | 51 | |
mpk | Microcystis panniformis | 5,974 | 1,850 | 48 | 48 | |
miq | Microcystis sp. MC19 | 4,535 | 1,810 | 52 | 51 | |
mvz | Microcystis viridis | 5,330 | 1,926 | 49 | 47 | |
Halothece | ||||||
hao | Halothece sp. PCC 7418 | 3,708 | 1,757 | 58 | 57 | |
Euhalothece | ||||||
enn | Euhalothece natronophila | 3,257 | 1,588 | 54 | 37 | |
Atelocyanobacterium | ||||||
cyu | Candidatus Atelocyanobacterium thalassa | 1,200 | 793 | 42 | 42 | |
Crocosphaera | ||||||
cyt | Crocosphaera subtropica | 5,304 | 1,973 | 55 | 51 | |
cwa | Crocosphaera watsonii | 5,958 | 2,052 | 38 | 37 | |
Rippkaea | ||||||
cyp | Rippkaea orientalis PCC 8801 | 4,367 | 1,859 | 53 | 52 | |
cyh | Rippkaea orientalis PCC 8802 | 4,444 | 1,845 | 52 | 51 | |
Gloeothece | ||||||
cyc | Gloeothece citriformis | 5,710 | 2,119 | 57 | 56 | |
cyj | Gloeothece verrucosa | 6,642 | 2,221 | 60 | 58 | |
Trichodesmium | ||||||
ter | Trichodesmium erythraeum | 4,451 | 1,663 | 48 | 46 | |
Arthrospira | ||||||
arp | Arthrospira platensis | 6,630 | 1,916 | 46 | 46 | |
Planktothrix | ||||||
pagh | Planktothrix agardhii | 4,492 | 1,739 | 55 | 41 | |
ppsu | Planktothrix pseudagardhii | 5,695 | 1,808 | 64 | 25 | |
prun | Planktothrix rubescens | 5,100 | 1,778 | 53 | ||
Microcoleus | ||||||
mvag | Microcoleus vaginatus | 5,044 | 1,772 | 87 | 30 | |
Limnospira | ||||||
lfs | Limnospira fusiformis | 5,419 | 1,924 | 51 | 42 | |
lix | Limnospira indica | 4,921 | 1,748 | 52 | ||
Capilliphycus | ||||||
csau | Capilliphycus salinus | 6136 | 67 | |||
Oxynema | ||||||
oxy | Oxynema aestuarii | 4,801 | 1,921 | 93 | 58 | |
Oscillatoria | ||||||
oac | Oscillatoria acuminata | 5,796 | 2,034 | 96 | 74 | |
Phormidium | ||||||
phor | Phormidium sp. PBR-2020 | 4,189 | 1,621 | 54 | 32 | |
pyh | Phormidium yuhuli | 4,040 | 1,530 | 54 | 22 | |
oni | Oscillatoria nigro-viridis | 6,360 | 2,175 | 81 | 78 | |
Allocoleopsis | ||||||
mic | Allocoleopsis franciscana | 6,441 | 2,246 | 88 | 82 | |
Moorena | ||||||
mpro | Moorena producens | 6,706 | 2,157 | 67 | 49 | |
Geitlerinema | ||||||
gei | Geitlerinema sp. PCC 7407 | 3,815 | 1,715 | 58 | 57 | |
Gloeobacter | ||||||
gvi | Gloeobacter violaceus | Ref | 4,430 | 1,595 | 52 | 36 |
glj | Gloeobacter kilaueensis | 4,507 | 1,726 | 55 | 39 | |
gml | Gloeobacter morelensis | 4,755 | 1,677 | 52 | 35 | |
Nostoc | ||||||
ana | Nostoc sp. PCC 7120 | Ref | 6,132 | 2,141 | 83 | 79 |
npu | Nostoc punctiforme | Ref | 6,690 | 2,162 | 104 | 87 |
nos | Nostoc sp. PCC 7107 | 5,237 | 1,956 | 92 | 87 | |
nop | Nostoc sp. PCC 7524 | 5,449 | 2,094 | 84 | 80 | |
non | Nostoc sp. NIES-3756 | 5,954 | 2,126 | 80 | 59 | |
nfl | Nostoc flagelliforme | 10,825 | 2,287 | 87 | 71 | |
noe | Nostoc sp. CENA543 | 5,831 | 2,155 | 92 | 68 | |
nsh | Nostoc sphaeroides | 10,473 | 2,377 | 80 | 66 | |
ned | Nostoc edaphicum | 6,459 | 2,304 | 84 | 43 | |
npz | Nostoc piscinale | 5,022 | 1,711 | 82 | ||
nlk | Nostoc linckia | 6,951 | 2,233 | 80 | ||
ncw | Nostoc carneum | 7,508 | 2,422 | 88 | ||
ncf | Nostoc cf. commune | 6,855 | 1,714 | 57 | ||
nost | Nostoc sp. ATCC 53789 | 6,776 | 2,200 | 109 | ||
nosu | Nostoc sp. UHCC 0702 | 7,172 | 2,189 | 98 | ||
nosq | Nostoc sp. UHCC 0926 | 6,968 | 2,081 | 88 | ||
Trichormus | ||||||
ava | Trichormus variabilis | 5,706 | 2,171 | 62 | 61 | |
naz | 'Nostoc azollae' 0708 | 3,651 | 1,416 | 59 | 56 | |
Anabaena | ||||||
anb | Anabaena sp. 90 | 4,511 | 1,770 | 59 | 59 | |
acy | Anabaena cylindrica | 5,838 | 2,093 | 76 | 72 | |
awa | Anabaena sp. WA102 | 4,742 | 1,834 | 59 | 59 | |
ann | Anabaena sp. YBS01 | 5,539 | 2,149 | 55 | 46 | |
Cylindrospermum | ||||||
csg | Cylindrospermum stagnale | 6,229 | 2,065 | 96 | 78 | |
Richelia | ||||||
rsin | Richelia sinica | 5,237 | 1,901 | 60 | 47 | |
Halotia | ||||||
hbq | Halotia branconii | 6,077 | 2,059 | 59 | ||
Nodularia | ||||||
nsp | Nodularia spumigena | 2,325 | 980 | 57 | 49 | |
nsph | Nodularia sphaerocarpa | 4,521 | 1,781 | 53 | 41 | |
Anabaenopsis | ||||||
aee | Anabaenopsis elenkinii | 3,704 | 1,699 | 61 | ||
Calothrix | ||||||
calo | Calothrix sp. PCC 7507 | 5,950 | 2,134 | 84 | 80 | |
calt | Calothrix sp. PCC 6303 | 5,535 | 1,969 | 56 | 54 | |
calh | Calothrix sp. 336/3 | 5,043 | 1,923 | 65 | 53 | |
caln | Calothrix sp. NIES-2098 | 7,353 | 2,295 | 88 | 37 | |
cals | Calothrix sp. NIES-3974 | 4,821 | 1,796 | 48 | ||
Rivularia | ||||||
riv | Rivularia sp. PCC 7116 | 6,644 | 2,265 | 66 | 58 | |
Microchaete | ||||||
mdp | Microchaete diplosiphon | 8,047 | 2,237 | 104 | ||
Fischerella | ||||||
fis | Fischerella sp. NIES-3754 | 4,939 | 1,954 | 57 | 46 | |
Dolichospermum | ||||||
dou | Dolichospermum sp. UHCC 0315A | 5,074 | 1,853 | 67 | 47 | |
dfs | Dolichospermum flos-aquae | 4,457 | 1,807 | 66 | 45 | |
dht | Dolichospermum heterosporum | 5,025 | 1,828 | 62 | 45 | |
dcm | Dolichospermum compactum | 4,719 | 1,725 | 59 | ||
dot | Dolichospermum sp. DET69 | 5,164 | 1,911 | 64 | ||
doz | Dolichospermum sp. UKL201 | 4,458 | 1,732 | 64 | ||
doc | Dolichospermum sp. DL01 | 4,153 | 1,678 | 63 | ||
Cylindrospermopsis | ||||||
ccur | Cylindrospermopsis curvispora | 3,395 | 1,608 | 55 | 46 | |
crk | Cylindrospermopsis raciborskii | 3,220 | 1,496 | 55 | 46 | |
Aphanizomenon | ||||||
aflo | Aphanizomenon flos-aquae | 3,841 | 1,648 | 62 | 45 | |
Sphaerospermopsis | ||||||
stoq | Sphaerospermopsis torques-reginae | 4,611 | 1,796 | 59 | ||
skv | Sphaerospermopsis kisseleviana | 5,056 | 1,808 | 53 | ||
Raphidiopsis | ||||||
rcs | Raphidiopsis curvata | 3,092 | 1,472 | 52 | ||
Okeanomitos | ||||||
ocf | Okeanomitos corallinicola | 4,555 | 1,703 | 62 | ||
Tolypothrix | ||||||
toq | Tolypothrix sp. PCC 7910 | 6,701 | 2,335 | 115 | 72 | |
ttq | Tolypothrix tenuis | 7,299 | 2,342 | 88 | ||
Aulosira | ||||||
alax | Aulosira laxa | 7,307 | 2,347 | 90 | ||
Scytonema | ||||||
scyt | Scytonema sp. HK-05 | 8,284 | 2,563 | 54 | ||
scys | Scytonema sp. NIES-4073 | 8,443 | 2,558 | 58 | ||
Brasilonema | ||||||
bsen | Brasilonema sennae | 6,371 | 2,218 | 56 | ||
box | Brasilonema octagenarum | 6,395 | 2,235 | 58 | ||
unclassified Nostocales | ||||||
ncn | Nostocales cyanobacterium HT-58-2 | 6,177 | 2,322 | 60 | 49 | |
Chroococcidiopsis | ||||||
cthe | Chroococcidiopsis thermalis | 5,752 | 2,296 | 58 | 56 | |
Pleurocapsa | ||||||
plp | Pleurocapsa sp. PCC 7327 | 4,268 | 1,899 | 56 | 53 | |
Stanieria | ||||||
scs | Stanieria cyanosphaera | 4,781 | 1,972 | 52 | 50 | |
stan | Stanieria sp. NIES-3757 | 4,917 | 1,947 | 53 | 50 | |
Gloeomargarita | ||||||
glt | Gloeomargarita lithophora | 3,034 | 1,368 | 45 | ||
unclassified Gloeomargaritales | ||||||
gcy | Gloeomargaritales cyanobacterium VI4D9 | 2,889 | 1,313 | 51 | 1 | |
Desertifilum | ||||||
dtb | Desertifilum tharense | 5,502 | 793 | 71 | ||
unclassified Cyanobacteria | ||||||
ceo | Cyanobacterium endosymbiont of Epithemia turgida | 1,720 | 983 | 48 | 46 | |
cer | Cyanobacterium endosymbiont of Rhopalodia gibberula | 1,671 | 1,064 | 45 | 42 | |
ceec | Cyanobacterium endosymbiont of Epithemia clementina | 1,910 | 1,060 | 49 | ||
Melainabacteria | ||||||
unclassified Melainabacteria | ||||||
mbf | Candidatus Melainabacteria bacterium MEL.A1 | 1,772 | 777 | 50 | 22 | |
Chloroflexota | ||||||
Dehalococcoides | ||||||
det | Dehalococcoides mccartyi 195 | 1,580 | 864 | 51 | 51 | |
deh | Dehalococcoides mccartyi CBDB1 | 1,458 | 843 | 52 | 52 | |
deb | Dehalococcoides mccartyi BAV1 | 1,371 | 831 | 51 | 51 | |
dev | Dehalococcoides mccartyi VS | 1,438 | 855 | 52 | 51 | |
deg | Dehalococcoides mccartyi GT | 1,417 | 817 | 51 | 51 | |
dmc | Dehalococcoides mccartyi BTF08 | 1,529 | 846 | 49 | 49 | |
dmd | Dehalococcoides mccartyi DCMB5 | 1,477 | 858 | 49 | 49 | |
dmg | Dehalococcoides mccartyi GY50 | 1,519 | 845 | 59 | 51 | |
dmx | Dehalococcoides mccartyi CG1 | 1,569 | 858 | 52 | 51 | |
dmy | Dehalococcoides mccartyi CG4 | 1,449 | 842 | 50 | 49 | |
dmz | Dehalococcoides mccartyi CG5 | 1,430 | 845 | 50 | 49 | |
duc | Dehalococcoides sp. UCH007 | 1,509 | 869 | 50 | 49 | |
Dehalogenimonas | ||||||
dly | Dehalogenimonas lykanthroporepellens | 1,659 | 945 | 52 | 52 | |
dew | Dehalogenimonas sp. WBC-2 | 1,721 | 880 | 52 | 48 | |
dfo | Dehalogenimonas formicexedens | 2,149 | 1,047 | 54 | 50 | |
deth | Dehalogenimonas etheniformans | 2,007 | 1,029 | 52 | 6 | |
dlf | Candidatus Dehalogenimonas loeffleri | 1,763 | 947 | 52 | ||
Lucifugimonas | ||||||
lmaj | Candidatus Lucifugimonas marina | 2,762 | 1,256 | 52 | ||
Roseiflexus | ||||||
rrs | Roseiflexus sp. RS-1 | 4,517 | 2,072 | 57 | 57 | |
rca | Roseiflexus castenholzii | 4,330 | 2,026 | 56 | 56 | |
Chloroflexus | ||||||
cau | Chloroflexus aurantiacus | Ref | 3,853 | 1,714 | 61 | 60 |
chl | Chloroflexus aurantiacus Y-400-fl | 4,159 | 1,778 | 61 | 61 | |
cag | Chloroflexus aggregans | 3,730 | 1,793 | 60 | 59 | |
Herpetosiphon | ||||||
hau | Herpetosiphon aurantiacus | 5,278 | 2,058 | 68 | 68 | |
Chlorohelix | ||||||
call | Candidatus Chlorohelix allophototropha | 4,996 | 1,884 | 61 | 1 | |
Thermobaculum | ||||||
ttr | Thermobaculum terrenum | 2,832 | 1,513 | 60 | 59 | |
Anaerolinea | ||||||
atm | Anaerolinea thermophila | 3,167 | 1,535 | 59 | 45 | |
Brevefilum | ||||||
abat | Brevefilum fermentans | 2,283 | 1,085 | 62 | 24 | |
Pelolinea | ||||||
psub | Pelolinea submarina | 3,035 | 1,592 | 50 | 30 | |
Leptolinea | ||||||
lek | Leptolinea sp. HRD-7 | 3,457 | 1,056 | 56 | 2 | |
unclassified Anaerolineaceae | ||||||
abao | Anaerolineaceae bacterium oral taxon 439 | 2,541 | 1,405 | 58 | 26 | |
Caldilinea | ||||||
cap | Caldilinea aerophila | 4,119 | 2,060 | 55 | 50 | |
Promineifilum | ||||||
pbf | Candidatus Promineifilum breve | 4,596 | 1,793 | 63 | 21 | |
Ktedonosporobacter | ||||||
kbs | Ktedonosporobacter rubrisoli | 9,347 | 3,148 | 68 | 35 | |
unclassified Ktedonobacteria | ||||||
kbb | Ktedonobacteria bacterium brp13 | 7,205 | 2,326 | 93 | ||
Tepidiforma | ||||||
tbh | Tepidiforma bonchosmolovskayae | 2,636 | 1,282 | 53 | 34 | |
tfla | Tepidiforma flava | 2,882 | 1,135 | 53 | 1 | |
Thermoflexus | ||||||
thug | Thermoflexus hugenholtzii | 2,957 | 1,545 | 54 | 3 | |
Phototrophicus | ||||||
pmet | Phototrophicus methaneseepsis | 4,815 | 1,831 | 55 | 2 | |
Armatimonadota | ||||||
Chthonomonas | ||||||
ccz | Chthonomonas calidirosea | 2,811 | 1,307 | 55 | 53 | |
Fimbriimonas | ||||||
fgi | Fimbriimonas ginsengisoli | 4,820 | 1,669 | 50 | 16 | |
Nitrosymbiomonas | ||||||
npy | Candidatus Nitrosymbiomonas proteolyticus | 2,561 | 1,208 | 51 | 20 | |
Capsulimonas | ||||||
ccot | Capsulimonas corticalis | 6,611 | 1,270 | 90 | 2 | |
Vulcanimicrobiota | ||||||
Vulcanimicrobium | ||||||
vab | Vulcanimicrobium alpinum | 3,577 | 1,647 | 57 | 2 | |
Deinococcota | ||||||
Deinococcus | ||||||
dra | Deinococcus radiodurans | Ref | 3,101 | 1,394 | 58 | 55 |
dge | Deinococcus geothermalis | 3,054 | 1,645 | 63 | 63 | |
ddr | Deinococcus deserti | 3,466 | 1,726 | 63 | 62 | |
dmr | Deinococcus maricopensis | 3,264 | 1,594 | 66 | 64 | |
dpt | Deinococcus proteolyticus | 2,656 | 1,321 | 58 | 57 | |
dgo | Deinococcus gobiensis | 4,340 | 1,839 | 106 | 62 | |
dpd | Deinococcus peraridilitoris | 4,183 | 1,842 | 63 | 62 | |
dsw | Deinococcus radiopugnans | 2,904 | 1,496 | 55 | 55 | |
dch | Deinococcus soli (ex Cha et al. 2016) | 2,944 | 1,490 | 59 | 59 | |
dab | Deinococcus actinosclerus | 3,049 | 1,468 | 59 | 59 | |
dpu | Deinococcus puniceus | 2,617 | 1,352 | 57 | 57 | |
dez | Deinococcus irradiatisoli | 2,911 | 1,433 | 60 | 60 | |
dwu | Deinococcus wulumuqiensis | 3,384 | 1,542 | 59 | 53 | |
dfc | Deinococcus ficus | 3,889 | 1,757 | 70 | 64 | |
dein | Deinococcus sp. AJ005 | 3,642 | 1,802 | 58 | 47 | |
dga | Deinococcus grandis | 3,977 | 1,818 | 64 | 41 | |
dph | Deinococcus psychrotolerans | 4,056 | 1,771 | 59 | 47 | |
drd | Deinococcus radiophilus | 2,706 | 1,255 | 61 | 33 | |
drb | Deinococcus rubellus | 3,002 | 1,264 | 60 | 48 | |
dah | Deinococcus aetherius | 4,893 | 1,697 | 73 | 3 | |
daqu | Deinococcus aquaticus | 3,572 | 1,565 | 61 | 3 | |
dtae | Deinococcus taeanensis | 4,147 | 1,815 | 65 | ||
dmb | Deinococcus metallilatus | 4,051 | 1,849 | 64 | ||
dsc | Deinococcus sonorensis | 4,349 | 1,805 | 70 | 1 | |
deid | Deinococcus sp. D7000 | 4,287 | 1,846 | 58 | ||
Truepera | ||||||
tra | Truepera radiovictrix | 2,945 | 1,644 | 52 | 52 | |
Thermus | ||||||
tth | Thermus thermophilus HB27 | Ref | 2,210 | 1,278 | 53 | 53 |
ttj | Thermus thermophilus HB8 | 2,238 | 1,309 | 53 | 53 | |
tts | Thermus thermophilus SG0.5JP17-16 | 2,339 | 1,375 | 56 | 56 | |
ttl | Thermus thermophilus JL-18 | 2,402 | 1,396 | 56 | 56 | |
tsc | Thermus scotoductus | 2,461 | 1,400 | 53 | 53 | |
thc | Thermus sp. CCB_US3_UF1 | 2,279 | 1,384 | 54 | 53 | |
tos | Thermus oshimai | 2,435 | 1,396 | 60 | 60 | |
taq | Thermus aquaticus | 2,519 | 1,300 | 55 | 55 | |
tpar | Thermus parvatiensis | 1,573 | 920 | 56 | 56 | |
tbc | Thermus brockianus | 2,365 | 1,384 | 72 | 58 | |
tant | Thermus antranikianii | 2,495 | 1,389 | 59 | 58 | |
Meiothermus | ||||||
mrb | Meiothermus ruber DSM 1279 | 3,014 | 1,688 | 53 | 53 | |
mre | Meiothermus ruber DSM 1279 | 3,056 | 1,695 | 53 | 53 | |
mtai | Meiothermus taiwanensis | 2,952 | 1,659 | 53 | 53 | |
Allomeiothermus | ||||||
msv | Allomeiothermus silvanus | 3,505 | 1,786 | 55 | 55 | |
Oceanithermus | ||||||
opr | Oceanithermus profundus | 2,373 | 1,332 | 54 | 54 | |
Marinithermus | ||||||
mhd | Marinithermus hydrothermalis | 2,205 | 1,352 | 59 | 59 | |
Synergistota | ||||||
Thermanaerovibrio | ||||||
tai | Thermanaerovibrio acidaminovorans | 1,738 | 1,175 | 63 | 62 | |
Cloacibacillus | ||||||
cpor | Cloacibacillus porcorum | 3,108 | 1,736 | 72 | 45 | |
Aminobacterium | ||||||
aco | Aminobacterium colombiense | 1,876 | 1,236 | 58 | 57 | |
amiz | Aminobacterium sp. MB27-C1 | 2,272 | 1,425 | 60 | 2 | |
Fretibacterium | ||||||
sbr | Fretibacterium fastidiosum | 1,435 | 785 | 41 | 41 | |
Thermovirga | ||||||
tli | Thermovirga lienii | 1,875 | 1,258 | 59 | 58 | |
Acetomicrobium | ||||||
amo | Acetomicrobium mobile | 2,017 | 1,382 | 56 | 56 | |
Pyramidobacter | ||||||
ppio | Pyramidobacter piscolens | 2,518 | 1,396 | 68 | 17 | |
pyy | Pyramidobacter sp. YE332 | 2,552 | 1,406 | 70 | 1 | |
Aminithiophilus | ||||||
aram | Aminithiophilus ramosus | 2,678 | 1,516 | 67 | 3 | |
Thermotogota | ||||||
Thermotoga | ||||||
tma | Thermotoga maritima MSB8 | Ref | 1,846 | 1,179 | 49 | 49 |
tmm | Thermotoga maritima MSB8 | 1,891 | 1,230 | 53 | 53 | |
tmi | Thermotoga maritima MSB8 | 1,871 | 1,224 | 50 | 50 | |
tmw | Thermotoga maritima MSB8 | 1,873 | 1,226 | 50 | 50 | |
tmq | Thermotoga maritima Tma100 | 1,872 | 1,225 | 50 | 50 | |
tmx | Thermotoga maritima Tma200 | 1,862 | 1,221 | 50 | 50 | |
tpt | Thermotoga petrophila RKU-1 | 1,785 | 1,193 | 52 | 52 | |
tnp | Thermotoga petrophila RKU-10 | 1,768 | 1,183 | 52 | 52 | |
trq | Thermotoga sp. RQ2 | 1,819 | 1,238 | 52 | 52 | |
tna | Thermotoga neapolitana | 1,937 | 1,250 | 51 | 51 | |
thq | Thermotoga sp. 2812B | 1,823 | 1,223 | 49 | 49 | |
thz | Thermotoga sp. Cell2 | 1,688 | 1,134 | 49 | 49 | |
thr | Thermotoga sp. RQ7 | 1,833 | 1,209 | 50 | 50 | |
Pseudothermotoga | ||||||
tle | Pseudothermotoga lettingae | 2,040 | 1,364 | 52 | 52 | |
tta | Pseudothermotoga thermarum | 1,945 | 1,275 | 51 | 51 | |
phy | Pseudothermotoga hypogea | 2,097 | 1,377 | 50 | 50 | |
Thermosipho | ||||||
tme | Thermosipho melanesiensis | 1,879 | 1,152 | 65 | 65 | |
taf | Thermosipho africanus | 1,956 | 1,229 | 57 | 57 | |
thp | Thermosipho sp. 1063 | 1,706 | 1,093 | 61 | 61 | |
ther | Thermosipho sp. 1070 | 1,765 | 1,102 | 61 | 61 | |
tfe | Thermosipho ferrireducens | 1,881 | 1,127 | 52 | 52 | |
Fervidobacterium | ||||||
fno | Fervidobacterium nodosum | 1,750 | 1,126 | 59 | 59 | |
fpe | Fervidobacterium pennivorans | 1,947 | 1,212 | 57 | 57 | |
fia | Fervidobacterium islandicum | 2,043 | 1,197 | 56 | 56 | |
frr | Fervidobacterium riparium | 1,937 | 1,043 | 56 | 56 | |
fng | Fervidobacterium ngatamarikiense | 1,820 | 1,109 | 56 | ||
Tepiditoga | ||||||
ocy | Tepiditoga spiralis | 2,298 | 1,319 | 63 | 63 | |
Petrotoga | ||||||
pmo | Petrotoga mobilis | 1,898 | 1,291 | 57 | 57 | |
Marinitoga | ||||||
mpz | Marinitoga piezophila | 2,046 | 1,232 | 61 | 61 | |
marn | Marinitoga sp. 1137 | 1,917 | 1,165 | 62 | 62 | |
maeo | Marinitoga aeolica | 2,243 | 1,321 | 63 | 3 | |
Defluviitoga | ||||||
dtn | Defluviitoga tunisiensis | 1,825 | 1,178 | 56 | 56 | |
Oceanotoga | ||||||
ocs | Oceanotoga sp. DSM 15011 | 2,645 | 1,073 | 74 | 17 | |
Kosmotoga | ||||||
kol | Kosmotoga olearia | 2,118 | 1,226 | 55 | 55 | |
kpf | Kosmotoga pacifica | 1,897 | 1,152 | 53 | 53 | |
Mesotoga | ||||||
mpg | Mesotoga prima | 2,574 | 1,454 | 76 | 54 | |
minf | Mesotoga infera | 2,809 | 1,483 | 56 | 53 | |
Athalassotoga | ||||||
asac | Athalassotoga saccharophila | 2,004 | 1,251 | 60 | 36 | |
Fusobacteriota | ||||||
Fusobacterium | ||||||
fnu | Fusobacterium nucleatum subsp. nucleatum ATCC 25586 | Ref | 2,067 | 1,100 | 62 | 62 |
fnc | Fusobacterium vincentii 3_1_36A2 | 2,151 | 1,156 | 62 | 62 | |
fnt | Fusobacterium vincentii 3_1_27 | 2,004 | 1,151 | 61 | 61 | |
fus | Fusobacterium animalis 4_8 | 2,124 | 1,148 | 61 | 61 | |
fne | Fusobacterium animalis 7_1 | 2,419 | 1,204 | 61 | 61 | |
fhw | Fusobacterium hwasookii | 2,274 | 1,236 | 65 | 65 | |
fpd | Fusobacterium pseudoperiodonticum | 2,020 | 1,105 | 63 | 62 | |
fva | Fusobacterium varium | 3,686 | 1,792 | 81 | 79 | |
ful | Fusobacterium ulcerans | 3,151 | 1,701 | 82 | 81 | |
fmo | Fusobacterium mortiferum | 2,536 | 1,439 | 95 | 86 | |
fgo | Fusobacterium gonidiaformans | 1,562 | 1,028 | 71 | 71 | |
fnf | Fusobacterium necrophorum subsp. funduliforme | 1,929 | 1,194 | 72 | 72 | |
fpei | Fusobacterium periodonticum | 2,301 | 1,161 | 63 | 63 | |
fci | Fusobacterium canifelinum | 2,131 | 1,214 | 65 | 65 | |
fho | Fusobacterium hominis | 1,920 | 1,051 | 100 | 1 | |
fpol | Fusobacterium polymorphum | 2,334 | 1,187 | 48 | 3 | |
Ilyobacter | ||||||
ipo | Ilyobacter polytropus | 2,880 | 1,655 | 108 | 107 | |
Cetobacterium | ||||||
csom | Cetobacterium somerae | 2,684 | 1,548 | 118 | 74 | |
Leptotrichia | ||||||
lba | Leptotrichia buccalis | 2,220 | 1,183 | 64 | 64 | |
leo | Leptotrichia sp. oral taxon 212 | 2,110 | 1,175 | 58 | 58 | |
lot | Leptotrichia sp. oral taxon 847 | 1,938 | 1,058 | 62 | 61 | |
leq | Leptotrichia sp. oral taxon 498 | 1,937 | 1,070 | 63 | 62 | |
lhf | Leptotrichia hofstadii | 2,484 | 1,195 | 62 | 62 | |
lsz | Leptotrichia shahii | 1,968 | 1,105 | 61 | 57 | |
lhg | Leptotrichia hongkongensis | 2,196 | 1,115 | 62 | 62 | |
lte | Leptotrichia trevisanii | 2,387 | 1,186 | 61 | 61 | |
lwd | Leptotrichia wadei | 2,107 | 1,171 | 62 | 57 | |
lrug | Leptotrichia rugosa | 2,074 | 1,032 | 63 | ||
lmes | Leptotrichia mesophila | 2,283 | 1,121 | 65 | ||
lala | Leptotrichia alba | 2,299 | 1,095 | 64 | ||
Pseudoleptotrichia | ||||||
lgo | Pseudoleptotrichia goodfellowii | 2,230 | 1,242 | 57 | 46 | |
Sebaldella | ||||||
str | Sebaldella termitidis | 4,150 | 1,839 | 57 | 56 | |
Streptobacillus | ||||||
smf | Streptobacillus moniliformis | 1,442 | 859 | 57 | 57 | |
Sneathia | ||||||
sns | Sneathia vaginalis | 1,183 | 765 | 47 | 47 | |
Haliovirga | ||||||
haby | Haliovirga abyssi | 2,290 | 1,199 | 55 | ||
Bacteria incertae sedis | ||||||
Saccharimonas | ||||||
saal | Candidatus Saccharimonas aalborgensis | 1,034 | 444 | 52 | 52 | |
Nanosynbacter | ||||||
sox | Candidatus Nanosynbacter lyticus | 692 | 378 | 47 | 47 | |
nft | Candidatus Nanosynbacter featherlites | 749 | 381 | 49 | 4 | |
nanh | Candidatus Nanosynbacter sp. HMT-352 | 675 | 358 | 47 | ||
Minimicrobia | ||||||
mvl | Candidatus Minimicrobia vallesae | 809 | 261 | 45 | 6 | |
mnd | Candidatus Minimicrobia naudis | 915 | 169 | 44 | 5 | |
Mycosynbacter | ||||||
mama | Candidatus Mycosynbacter amalyticus | 1,120 | 267 | 48 | 1 | |
unclassified Nanogingivalaceae | ||||||
nbj | Candidatus Nanogingivalaceae bacterium JCVI_28_bin.11 | 680 | 311 | 48 | ||
unclassified Saccharibacteria | ||||||
sbe | Candidatus Saccharibacteria bacterium RAAC3_TM7_1 | 920 | 421 | 41 | 31 | |
sbag | Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 | 1,091 | 449 | 43 | 29 | |
Peribacter | ||||||
prf | Candidatus Peribacter riflensis | 1,102 | 486 | 46 | 11 | |
Bipolaricaulis | ||||||
bana | Candidatus Bipolaricaulis anaerobius | 1,320 | 778 | 54 | 22 | |
bih | Candidatus Bipolaricaulis sibiricus | 1,663 | 904 | 47 | 20 | |
Absconditicoccus | ||||||
aprd | Candidatus Absconditicoccus praedator | 1,017 | 401 | 42 | 14 | |
unclassified Absconditabacteria | ||||||
srb | Candidate division SR1 bacterium RAAC1_SR1_1 | 1,059 | 412 | 40 | 17 | |
srg | Candidate division SR1 bacterium Aalborg_AAW-1 | 993 | 408 | 42 | 13 | |
Methylomirabilis | ||||||
mox | Candidatus Methylomirabilis oxygeniifera | 3,072 | 1,454 | 54 | 52 | |
Chazhemtobacterium | ||||||
caqa | Candidatus Chazhemtobacterium aquaticus | 837 | 354 | 50 | 10 | |
Minisyncoccus | ||||||
marw | Minisyncoccus archaeiphilus | 1,305 | 435 | 48 | ||
Sumerlaea | ||||||
schv | Candidatus Sumerlaea chitinivorans | 2,851 | 1,172 | 48 | 4 | |
Fervidibacter | ||||||
fsh | Candidatus Fervidibacter sacchari | 3,594 | 1,298 | 54 | 1 | |
Babela | ||||||
dpb | Candidatus Babela massiliensis | 981 | 391 | 45 | 45 | |
Chromulinivorax | ||||||
cdes | Candidatus Chromulinivorax destructor | 1,075 | 408 | 46 | 9 | |
Vermiphilus | ||||||
vpm | Vermiphilus pyriformis | 1,052 | 417 | 44 | 13 | |
Bacteria candidate phyla | ||||||
tmg | Candidate division TM6 bacterium GW2011_GWF2_28_16 | 855 | 401 | 47 | 3 | |
wwe | Candidate division WWE3 bacterium RAAC2_WWE3_1 | 871 | 365 | 48 | 44 | |
bgw | Candidate division Kazan bacterium GW2011_GWA1_50_15 | 591 | 288 | 4 | ||
bbgw | Berkelbacteria bacterium GW2011_GWE1_39_12 | 992 | 431 | 45 | 7 | |
mib | Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16 | 1,113 | 473 | 47 | 16 | |
wba | Candidatus Woesebacteria bacterium GW2011_GWF1_31_35 | 909 | 346 | 46 | 3 | |
pwo | Candidatus Wolfebacteria bacterium GW2011_GWB1_47_1 | 1,022 | 415 | 49 | 10 | |
cgw | Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 | 739 | 326 | 4 | ||
kbn | Candidatus Kaiserbacteria bacterium NC_groundwater_79_Ag_B-0.1um_58_26 | 928 | 420 | 47 | 3 | |
nbn | Candidatus Niyogibacteria bacterium NC_groundwater_707_Ag_S-0.2um_45_26 | 879 | 389 | 53 | ||
fbn | Candidatus Falkowbacteria bacterium NC_groundwater_1683_Pr3_B-0.1um_40_26 | 907 | 422 | 50 | ||
gbg | Candidatus Giovannonibacteria bacterium NC_groundwater_467_Ag_B-0.1um_47_26 | 713 | 317 | 51 | ||
unclassified Bacteria | ||||||
baab | Bacterium AB1 | 610 | 127 | 33 | 1 | |
Archaea | ||||||
Methanobacteriota | ||||||
Methanocaldococcus | ||||||
mja | Methanocaldococcus jannaschii | Ref | 1,770 | 1,064 | 43 | 43 |
mfe | Methanocaldococcus fervens | 1,581 | 1,026 | 45 | 45 | |
mvu | Methanocaldococcus vulcanius | 1,742 | 1,071 | 43 | 43 | |
mfs | Methanocaldococcus sp. FS406-22 | 1,816 | 1,099 | 44 | 44 | |
mif | Methanocaldococcus infernus | 1,441 | 1,014 | 46 | 46 | |
mjh | Methanocaldococcus bathoardescens | 1,635 | 1,058 | 41 | 40 | |
mesg | Methanocaldococcus lauensis SG7 | 1,607 | 1,001 | 107 | 4 | |
mesa | Methanocaldococcus lauensis SG1 | 1,585 | 1,002 | 115 | 5 | |
Methanotorris | ||||||
mig | Methanotorris igneus | 1,772 | 1,120 | 42 | 42 | |
Methanococcus | ||||||
mmp | Methanococcus maripaludis S2 | Ref | 1,722 | 1,094 | 50 | 50 |
mmq | Methanococcus maripaludis C5 | 1,822 | 1,118 | 47 | 47 | |
mmx | Methanococcus maripaludis C6 | 1,826 | 1,093 | 48 | 48 | |
mmz | Methanococcus maripaludis C7 | 1,788 | 1,104 | 47 | 47 | |
mmd | Methanococcus maripaludis X1 | 1,850 | 1,113 | 42 | 42 | |
mmak | Methanococcus maripaludis KA1 | 1,969 | 1,210 | 47 | 47 | |
mmao | Methanococcus maripaludis OS7 | 1,837 | 1,137 | 46 | 46 | |
mmad | Methanococcus maripaludis DSM 2067 | 1,815 | 1,091 | 46 | 37 | |
mae | Methanococcus aeolicus | 1,490 | 1,017 | 46 | 46 | |
mvn | Methanococcus vannielii | 1,678 | 1,101 | 51 | 51 | |
mvo | Methanococcus voltae | 1,717 | 1,041 | 47 | 47 | |
Methanothermococcus | ||||||
mok | Methanothermococcus okinawensis | 1,595 | 1,011 | 46 | 46 | |
Methanofervidicoccus | ||||||
metf | Methanofervidicoccus sp. A16 | 1,303 | 926 | 44 | 44 | |
Methanothermobacter | ||||||
mth | Methanothermobacter thermautotrophicus | Ref | 1,869 | 1,047 | 47 | 46 |
mmg | Methanothermobacter marburgensis | 1,757 | 1,044 | 49 | 49 | |
mwo | Methanothermobacter wolfeii | 1,792 | 1,058 | 44 | 44 | |
mtee | Methanothermobacter tenebrarum | 1,635 | 950 | 41 | 1 | |
metc | Methanothermobacter sp. CaT2 | 1,760 | 1,064 | 46 | 46 | |
mete | Methanothermobacter sp. EMTCatA1 | 1,814 | 1,058 | 42 | 40 | |
metz | Methanothermobacter sp. MT-2 | 1,604 | 979 | 43 | 43 | |
metk | Methanothermobacter sp. KEPCO-1 | 1,764 | 1,065 | 48 | 42 | |
mthm | Methanothermobacter sp. THM-1 | 1,665 | 1,016 | 50 | 40 | |
metj | Methanothermobacter sp. THM-2 | 1,643 | 974 | 49 | 4 | |
Methanosphaera | ||||||
mst | Methanosphaera stadtmanae | 1,534 | 935 | 52 | 52 | |
metb | Methanosphaera sp. BMS | 2,108 | 1,029 | 46 | 36 | |
meis | Methanosphaera sp. ISO3-F5 | 2,280 | 1,034 | 50 | ||
Methanobrevibacter | ||||||
mru | Methanobrevibacter ruminantium | 2,217 | 1,072 | 66 | 66 | |
msi | Methanobrevibacter smithii | 1,795 | 1,004 | 42 | 42 | |
meb | Methanobrevibacter sp. AbM4 | 1,671 | 1,002 | 45 | 45 | |
mmil | Methanobrevibacter millerae | 2,269 | 1,107 | 47 | 47 | |
meye | Methanobrevibacter sp. YE315 | 1,942 | 1,032 | 40 | 40 | |
mol | Methanobrevibacter olleyae | 1,834 | 1,024 | 40 | 40 | |
maro | Methanobrevibacter arboriphilus | 2,063 | 1,006 | 37 | 1 | |
metv | Methanobrevibacter sp. TLL-48-HuF1 | 1,737 | 979 | 44 | 1 | |
Methanobacterium | ||||||
mel | Methanobacterium lacus | 2,493 | 1,212 | 51 | 51 | |
mew | Methanobacterium paludis | 2,397 | 1,192 | 58 | 58 | |
meth | Methanobacterium sp. MB1 | 2,021 | 1,139 | 48 | 48 | |
mfc | Methanobacterium formicicum BRM9 | 2,352 | 1,233 | 52 | 50 | |
mfi | Methanobacterium formicicum DSM1535 | 2,409 | 1,221 | 50 | 50 | |
mcub | Methanobacterium congolense | 2,345 | 1,160 | 53 | 46 | |
msub | Methanobacterium subterraneum | 2,347 | 1,209 | 51 | 46 | |
metn | Methanobacterium sp. MZ-A1 | 2,356 | 1,209 | 51 | 47 | |
mett | Methanobacterium sp. BRmetb2 | 2,114 | 1,148 | 41 | 40 | |
meto | Methanobacterium sp. BAmetb5 | 2,307 | 1,236 | 55 | 52 | |
meme | Methanobacterium alkalithermotolerans | 2,126 | 1,112 | 49 | 2 | |
mfeg | Methanobacterium ferruginis | 2,931 | 1,189 | 48 | 1 | |
meer | Methanobacterium sp. ERen5 | 2,721 | 1,064 | 56 | ||
mrid | Methanobacterium aridiramus | 2,063 | 1,029 | 46 | ||
Methanothermus | ||||||
mfv | Methanothermus fervidus | 1,283 | 879 | 49 | 47 | |
Methanopyrus | ||||||
mka | Methanopyrus kandleri | 1,687 | 927 | 38 | 37 | |
Archaeoglobus | ||||||
afu | Archaeoglobus fulgidus DSM 4304 | Ref | 2,407 | 1,209 | 49 | 49 |
afg | Archaeoglobus fulgidus DSM 8774 | 2,557 | 1,253 | 56 | 51 | |
apo | Archaeoglobus profundus | 1,823 | 959 | 53 | 53 | |
ave | Archaeoglobus veneficus | 2,090 | 1,157 | 49 | 49 | |
ast | Archaeoglobus sulfaticallidus | 2,216 | 1,175 | 60 | 54 | |
Ferroglobus | ||||||
fpl | Ferroglobus placidus | 2,480 | 1,301 | 55 | 55 | |
Geoglobus | ||||||
gac | Geoglobus acetivorans | 2,218 | 1,176 | 50 | 49 | |
gah | Geoglobus ahangari | 1,973 | 1,145 | 52 | 50 | |
Pyrococcus | ||||||
pfu | Pyrococcus furiosus DSM 3638 | Ref | 2,065 | 1,149 | 104 | 52 |
pfi | Pyrococcus furiosus COM1 | 2,064 | 1,143 | 49 | 48 | |
pho | Pyrococcus horikoshii | 2,061 | 1,035 | 49 | 49 | |
pab | Pyrococcus abyssi | 1,784 | 1,094 | 97 | 49 | |
pyn | Pyrococcus sp. NA2 | 1,980 | 1,133 | 49 | 49 | |
pya | Pyrococcus yayanosii | 1,865 | 1,039 | 50 | 49 | |
pys | Pyrococcus sp. ST04 | 1,748 | 1,110 | 50 | 50 | |
pyc | Pyrococcus kukulkanii | 1,997 | 1,138 | 61 | 51 | |
Thermococcus | ||||||
tko | Thermococcus kodakarensis | Ref | 2,306 | 1,110 | 51 | 51 |
ton | Thermococcus onnurineus | 1,976 | 1,103 | 51 | 50 | |
tga | Thermococcus gammatolerans | 2,157 | 1,154 | 54 | 52 | |
tsi | Thermococcus sibiricus | 2,036 | 1,114 | 50 | 50 | |
tba | Thermococcus barophilus | 2,265 | 1,173 | 50 | 50 | |
the | Thermococcus sp. 4557 | 2,133 | 1,122 | 48 | 48 | |
tha | Thermococcus sp. AM4 | 2,222 | 1,142 | 50 | 50 | |
thm | Thermococcus cleftensis | 2,017 | 1,071 | 50 | 50 | |
tlt | Thermococcus litoralis | 2,516 | 1,247 | 49 | 48 | |
ths | Thermococcus paralvinellae | 2,016 | 1,160 | 50 | 50 | |
tnu | Thermococcus nautili | 2,236 | 1,119 | 50 | 50 | |
teu | Thermococcus eurythermalis | 2,100 | 1,117 | 50 | 48 | |
tgy | Thermococcus guaymasensis | 2,092 | 1,102 | 51 | 51 | |
thv | Thermococcus sp. 2319x1 | 2,292 | 1,157 | 53 | 52 | |
tch | Thermococcus chitonophagus | 2,113 | 1,173 | 52 | 52 | |
tpep | Thermococcus peptonophilus | 1,967 | 1,057 | 52 | 52 | |
tpie | Thermococcus piezophilus | 1,867 | 1,013 | 52 | 52 | |
tgg | Thermococcus gorgonarius | 1,781 | 976 | 52 | 52 | |
tce | Thermococcus celer | 1,905 | 1,087 | 52 | 52 | |
tbs | Thermococcus barossii | 1,997 | 1,108 | 52 | 52 | |
thh | Thermococcus sp. 5-4 | 1,961 | 1,102 | 51 | 51 | |
tsl | Thermococcus siculi | 2,097 | 1,109 | 51 | 51 | |
ttd | Thermococcus thioreducens | 2,222 | 1,132 | 52 | 52 | |
tprf | Thermococcus profundus | 2,076 | 1,121 | 52 | 52 | |
trl | Thermococcus radiotolerans | 1,986 | 1,115 | 52 | 52 | |
tpaf | Thermococcus pacificus | 1,872 | 1,041 | 52 | 52 | |
thy | Thermococcus sp. P6 | 1,566 | 960 | 51 | 50 | |
tic | Thermococcus indicus | 2,272 | 1,200 | 51 | 1 | |
tcq | Thermococcus camini | 2,192 | 1,093 | 64 | 2 | |
them | Thermococcus aciditolerans | 2,263 | 1,156 | 52 | 1 | |
thei | Thermococcus argininiproducens | 2,049 | 1,084 | 52 | 1 | |
Palaeococcus | ||||||
ppac | Palaeococcus pacificus | 1,991 | 1,121 | 53 | 53 | |
Methanosarcina | ||||||
mba | Methanosarcina barkeri Fusaro | Ref | 3,625 | 1,567 | 74 | 73 |
mby | Methanosarcina barkeri MS | 3,518 | 1,562 | 67 | 67 | |
mbw | Methanosarcina barkeri Wiesmoor | 3,745 | 1,611 | 70 | 69 | |
mbar | Methanosarcina barkeri 227 | 3,469 | 1,562 | 68 | 68 | |
mbak | Methanosarcina barkeri 3 | 3,475 | 1,595 | 71 | 66 | |
mac | Methanosarcina acetivorans | 4,540 | 1,873 | 10 | 10 | |
mma | Methanosarcina mazei Go1 | 3,371 | 1,586 | 67 | 66 | |
mmaz | Methanosarcina mazei Tuc01 | 3,252 | 1,353 | 49 | 47 | |
mmj | Methanosarcina mazei S-6 | 3,347 | 1,578 | 65 | 61 | |
mmac | Methanosarcina mazei C16 | 3,371 | 1,596 | 66 | 63 | |
mvc | Methanosarcina vacuolata | 3,508 | 1,587 | 68 | 68 | |
mek | Methanosarcina sp. Kolksee | 3,476 | 1,594 | 70 | 70 | |
mls | Methanosarcina lacustris | 3,222 | 1,477 | 65 | 65 | |
metm | Methanosarcina sp. MTP4 | 3,250 | 1,534 | 64 | 64 | |
mef | Methanosarcina sp. WH1 | 3,198 | 1,566 | 64 | 64 | |
meq | Methanosarcina sp. WWM596 | 3,408 | 1,602 | 64 | 64 | |
msj | Methanosarcina siciliae C2J | 4,401 | 1,803 | 66 | 64 | |
msz | Methanosarcina siciliae HI350 | 3,900 | 1,722 | 65 | 63 | |
msw | Methanosarcina siciliae T4/M | 3,971 | 1,739 | 65 | 62 | |
mthr | Methanosarcina thermophila TM-1 | 2,560 | 1,315 | 67 | 65 | |
mthe | Methanosarcina thermophila CHTI-55 | 2,545 | 1,329 | 67 | 65 | |
mhor | Methanosarcina horonobensis | 4,095 | 1,792 | 66 | 65 | |
mfz | Methanosarcina flavescens | 2,677 | 1,310 | 60 | 53 | |
mhab | Methanosarcina hadiensis | 3,605 | 1,542 | 76 | ||
metw | Methanosarcina sp. 795 | 2,416 | 1,216 | 55 | ||
Methanococcoides | ||||||
mbu | Methanococcoides burtonii | 2,272 | 1,243 | 67 | 63 | |
mmet | Methanococcoides methylutens | 2,203 | 1,253 | 64 | 64 | |
melo | Methanococcoides orientis | 2,324 | 1,246 | 81 | 2 | |
Methanohalophilus | ||||||
mmh | Methanohalophilus mahii | 1,987 | 1,160 | 63 | 63 | |
mhaz | Methanohalophilus halophilus | 1,981 | 1,170 | 54 | 53 | |
mpot | Methanohalophilus portucalensis | 2,040 | 1,142 | 57 | ||
Methanohalobium | ||||||
mev | Methanohalobium evestigatum | 2,254 | 1,210 | 59 | 59 | |
Methanosalsum | ||||||
mzh | Methanosalsum zhilinae | 1,976 | 1,179 | 61 | 61 | |
Methanolobus | ||||||
mpy | Methanolobus psychrophilus | 3,167 | 1,382 | 62 | 62 | |
mzi | Methanolobus zinderi | 2,607 | 1,356 | 59 | 52 | |
mmav | Methanolobus mangrovi | 2,488 | 1,270 | 72 | ||
mseb | Methanolobus sediminis | 2,679 | 1,309 | 69 | ||
Methanomethylovorans | ||||||
mhz | Methanomethylovorans hollandica | 2,556 | 1,299 | 61 | 59 | |
Methanimicrococcus | ||||||
mehf | Methanimicrococcus hongohii | 1,764 | 873 | 55 | 2 | |
mees | Methanimicrococcus stummii | 1,599 | 868 | 55 | 2 | |
Methanothrix | ||||||
mtp | Methanothrix thermoacetophila | 1,696 | 1,028 | 51 | 51 | |
mcj | Methanothrix soehngenii | 2,850 | 1,340 | 50 | 50 | |
mhi | Methanothrix harundinacea | 2,371 | 1,207 | 43 | 42 | |
Methanospirillum | ||||||
mhu | Methanospirillum hungatei | 3,139 | 1,477 | 66 | 66 | |
mrtj | Methanospirillum purgamenti | 3,271 | 1,524 | 71 | 4 | |
Methanocorpusculum | ||||||
mla | Methanocorpusculum labreanum | 1,739 | 1,036 | 63 | 63 | |
Methanoculleus | ||||||
mem | Methanoculleus marisnigri | 2,489 | 1,258 | 53 | 53 | |
mbg | Methanoculleus bourgensis MS2 | 2,580 | 1,285 | 48 | 48 | |
mema | Methanoculleus bourgensis MAB1 | 3,450 | 1,272 | 51 | 47 | |
mchk | Methanoculleus chikugoensis | 2,575 | 1,272 | 49 | 2 | |
msum | Methanoculleus submarinus | 2,446 | 1,189 | 53 | 1 | |
mrc | Methanoculleus receptaculi | 1,992 | 1,091 | 52 | 1 | |
Methanolacinia | ||||||
mpi | Methanolacinia petrolearia | 2,785 | 1,359 | 57 | 57 | |
Methanoplanus | ||||||
mend | Methanoplanus endosymbiosus | 2,822 | 916 | 77 | 2 | |
Methanochimaera | ||||||
mefw | Methanochimaera problematica | 2,203 | 1,137 | 73 | ||
Methanofollis | ||||||
maqe | Methanofollis aquaemaris | 2,478 | 1,115 | 56 | 1 | |
mfk | Methanofollis formosanus | 2,568 | 1,245 | 57 | ||
Methanogenium | ||||||
mou | Methanogenium organophilum | 2,510 | 1,021 | 62 | 1 | |
mesb | Methanogenium sp. S4BF | 2,306 | 1,134 | 64 | ||
Methanomicrobium | ||||||
manq | Methanomicrobium antiquum | 2,296 | 1,108 | 64 | 1 | |
Methanoregula | ||||||
mbn | Methanoregula boonei | 2,450 | 1,231 | 53 | 52 | |
mfo | Methanoregula formicica | 2,816 | 1,293 | 54 | 54 | |
mesk | Methanoregula sp. SKADARSKE-2 | 1,991 | 318 | 49 | ||
Methanosphaerula | ||||||
mpl | Methanosphaerula palustris | 2,655 | 1,272 | 70 | 69 | |
Methanocella | ||||||
mpd | Methanocella paludicola | 3,004 | 1,387 | 58 | 58 | |
mez | Methanocella conradii | 2,455 | 1,280 | 57 | 56 | |
rci | Methanocella arvoryzae | 3,085 | 1,391 | 60 | 60 | |
Methanospirare | ||||||
mjk | Candidatus Methanospirare jalkutatii | 1,553 | 829 | 42 | ||
Halobacterium | ||||||
hal | Halobacterium salinarum NRC-1 | Ref | 2,605 | 1,199 | 52 | 52 |
hsl | Halobacterium salinarum R1 | 2,707 | 1,234 | 52 | 52 | |
hanr | Halobacterium salinarum NRC-34001 | 2,341 | 1,163 | 52 | 49 | |
hdl | Halobacterium sp. DL1 | 3,280 | 1,430 | 50 | 49 | |
hhb | Halobacterium hubeiense | 3,342 | 1,428 | 52 | 50 | |
hags | Halobacterium sp. GSL-19 | 2,367 | 1,183 | 52 | 49 | |
habo | Halobacterium sp. BOL4-2 | 2,501 | 1,182 | 52 | 49 | |
hno | Halobacterium noricense | 3,397 | 1,463 | 54 | 47 | |
hlu | Halobacterium litoreum | 2,900 | 1,297 | 52 | 47 | |
hanx | Halobacterium sp. NMX12-1 | 3,369 | 1,419 | 64 | ||
Halodesulfurarchaeum | ||||||
halh | Halodesulfurarchaeum formicicum HTSR1 | 2,023 | 1,117 | 48 | 47 | |
hhsr | Halodesulfurarchaeum formicicum HSR6 | 2,100 | 1,133 | 48 | 48 | |
Halanaeroarchaeum | ||||||
hsu | Halanaeroarchaeum sulfurireducens HSR2 | 2,228 | 1,133 | 50 | 50 | |
hsf | Halanaeroarchaeum sulfurireducens M27-SA2 | 2,270 | 1,134 | 49 | 49 | |
hahs | Halanaeroarchaeum sp. HSR-CO | 2,872 | 1,325 | 50 | 1 | |
Salarchaeum | ||||||
salr | Salarchaeum sp. JOR-1 | 2,529 | 1,247 | 50 | 43 | |
Halarchaeum | ||||||
halr | Halarchaeum sp. CBA1220 | 3,132 | 1,472 | 57 | 51 | |
Halalkalicoccus | ||||||
hje | Halalkalicoccus jeotgali | 3,873 | 1,594 | 49 | 49 | |
Halococcus | ||||||
hdo | Halococcus dombrowskii | 3,841 | 1,454 | 66 | 54 | |
Halorussus | ||||||
halx | Halorussus limi | 4,523 | 1,701 | 76 | 62 | |
haxz | Halorussus gelatinilyticus | 3,634 | 1,434 | 58 | 51 | |
hayc | Halorussus salilacus | 3,533 | 1,433 | 56 | 1 | |
haxy | Halorussus vallis | 4,946 | 1,742 | 55 | 2 | |
Salinarchaeum | ||||||
sali | Salinarchaeum sp. Harcht-Bsk1 | 3,013 | 1,367 | 48 | 48 | |
saim | Salinarchaeum sp. IM2453 | 2,419 | 1,237 | 50 | 41 | |
Natranaeroarchaeum | ||||||
hara | Natranaeroarchaeum sulfidigenes | 3,120 | 1,355 | 56 | 48 | |
Haloarcula | ||||||
hma | Haloarcula marismortui | Ref | 4,240 | 1,638 | 61 | 60 |
hhi | Haloarcula hispanica ATCC 33960 | 3,859 | 1,651 | 60 | 60 | |
hhn | Haloarcula hispanica N601 | 3,932 | 1,653 | 60 | 59 | |
hab | Haloarcula sp. CBA1115 | 3,916 | 1,657 | 59 | 59 | |
hta | Haloarcula taiwanensis | 3,614 | 1,614 | 57 | 54 | |
halj | Haloarcula sp. JP-L23 | 4,758 | 1,933 | 56 | 46 | |
hsin | Haloarcula sinaiiensis | 4,389 | 1,774 | 64 | 48 | |
Natronomonas | ||||||
nph | Natronomonas pharaonis | 2,802 | 1,341 | 51 | 44 | |
nmo | Natronomonas moolapensis | 2,749 | 1,348 | 50 | 50 | |
nho | Natronomonas halophila | 3,347 | 1,438 | 50 | 44 | |
nsal | Natronomonas salina | 3,810 | 1,552 | 50 | 43 | |
Halorhabdus | ||||||
hut | Halorhabdus utahensis | 2,998 | 1,378 | 50 | 50 | |
hti | Halorhabdus tiamatea | 3,023 | 1,369 | 49 | 49 | |
hala | Halorhabdus sp. CBA1104 | 2,453 | 1,243 | 51 | 47 | |
hasv | Halorhabdus sp. SVX81 | 2,848 | 1,331 | 49 | 1 | |
habn | Halorhabdus sp. BNX81 | 2,783 | 1,315 | 49 | 1 | |
Halomicrobium | ||||||
hmu | Halomicrobium mukohataei | 3,349 | 1,491 | 60 | 60 | |
halz | Halomicrobium mukohataei JP60 | 3,215 | 1,486 | 56 | 56 | |
hall | Halomicrobium sp. LC1Hm | 3,447 | 1,488 | 57 | 49 | |
hazp | Halomicrobium sp. ZPS1 | 3,055 | 1,369 | 55 | 49 | |
Halorientalis | ||||||
hali | Halorientalis sp. IM1011 | 3,746 | 1,515 | 83 | 73 | |
Halapricum | ||||||
hsn | Halapricum salinum | 3,303 | 1,461 | 49 | 48 | |
hds | Halapricum desulfuricans | 3,024 | 1,311 | 54 | 50 | |
Halosimplex | ||||||
hrr | Halosimplex rubrum | 4,320 | 1,717 | 69 | 54 | |
hpel | Halosimplex pelagicum | 5,025 | 1,837 | 72 | 51 | |
hlt | Halosimplex litoreum | 4,011 | 1,671 | 55 | 49 | |
Halococcoides | ||||||
harc | Halococcoides cellulosivorans | 2,532 | 1,199 | 67 | 52 | |
Salinirubellus | ||||||
ssai | Salinirubellus salinus | 4,416 | 1,445 | 53 | 1 | |
Halocatena | ||||||
haad | Halocatena salina | 3,723 | 1,550 | 51 | 47 | |
Haloquadratum | ||||||
hwa | Haloquadratum walsbyi DSM 16790 | 2,560 | 1,241 | 56 | 51 | |
hwc | Haloquadratum walsbyi C23 | 2,650 | 1,278 | 56 | 53 | |
Haloferax | ||||||
hvo | Haloferax volcanii DS2 | Ref | 4,027 | 1,650 | 49 | 49 |
hale | Haloferax volcanii wsp1 | 3,588 | 1,636 | 60 | 55 | |
hln | Haloferax volcanii SVX82 | 3,798 | 1,602 | 61 | ||
hme | Haloferax mediterranei | 3,828 | 1,631 | 64 | 63 | |
hgi | Haloferax gibbonsii | 3,704 | 1,669 | 62 | 60 | |
hls | Haloferax larsenii | 3,668 | 1,455 | 63 | 1 | |
Halogeometricum | ||||||
hbo | Halogeometricum borinquense | 3,898 | 1,636 | 57 | 57 | |
Haloplanus | ||||||
haq | Haloplanus rubicundus CBA1112 | 3,679 | 1,594 | 57 | 56 | |
haj | Haloplanus rubicundus CBA1113 | 3,428 | 1,566 | 63 | 62 | |
haer | Haloplanus aerogenes | 3,463 | 1,548 | 58 | 57 | |
hra | Haloplanus rallus | 3,463 | 1,556 | 56 | 50 | |
Halobellus | ||||||
hlm | Halobellus limi | 3,504 | 1,609 | 57 | 56 | |
Haloprofundus | ||||||
halm | Haloprofundus sp. MHR1 | 2,983 | 1,335 | 59 | 57 | |
Halorubrum | ||||||
hla | Halorubrum lacusprofundi | 3,560 | 1,520 | 61 | 61 | |
halp | Halorubrum sp. PV6 | 2,883 | 1,375 | 57 | 56 | |
halb | Halorubrum sp. BOL3-1 | 3,266 | 1,483 | 68 | 58 | |
hezz | Halorubrum ezzemoulense | 3,443 | 1,545 | 78 | 62 | |
halq | Halorubrum sp. CBA1229 | 3,484 | 1,562 | 65 | 55 | |
hss | Halorubrum ruber | 2,786 | 1,341 | 56 | 50 | |
hsai | Halorubrum salinarum | 3,250 | 1,442 | 56 | 49 | |
hazz | Halorubrum sp. 2020YC2 | 2,830 | 1,272 | 58 | 52 | |
Salinigranum | ||||||
srub | Salinigranum rubrum | 4,474 | 1,750 | 56 | 52 | |
Halohasta | ||||||
hae | Halohasta litchfieldiae | 3,343 | 1,434 | 55 | 50 | |
Halolamina | ||||||
haln | Halolamina sp. CBA1230 | 3,471 | 1,465 | 54 | 49 | |
Halorarum | ||||||
halg | Halorarum halophilum | 4,177 | 1,720 | 73 | 48 | |
halu | Halorarum salinum | 4,125 | 1,718 | 53 | 48 | |
Halobaculum | ||||||
hmp | Halobaculum magnesiiphilum | 3,644 | 1,495 | 61 | 46 | |
hre | Halobaculum roseum | 3,659 | 1,496 | 64 | 49 | |
hrm | Halobaculum rubrum | 3,014 | 1,317 | 54 | 45 | |
hacb | Halobaculum sp. CBA1158 | 3,323 | 1,335 | 55 | 45 | |
Halalkaliarchaeum | ||||||
hdf | Halalkaliarchaeum desulfuricum | 3,232 | 1,507 | 53 | 49 | |
haaa | Halalkaliarchaeum sp. AArc-CO | 303 | 173 | 5 | ||
unclassified Halobacteriales | ||||||
hah | Halophilic archaeon | 3,476 | 1,452 | 51 | 51 | |
Haloterrigena | ||||||
htu | Haloterrigena turkmenica | 5,113 | 2,079 | 64 | 63 | |
hsal | Haloterrigena salifodinae | 4,729 | 1,916 | 70 | 53 | |
hakz | Haloterrigena alkaliphila | 4,046 | 1,669 | 59 | 52 | |
Natrialba | ||||||
nmg | Natrialba magadii | 4,204 | 1,734 | 60 | 60 | |
Halopiger | ||||||
hxa | Halopiger xanaduensis | 4,221 | 1,769 | 60 | 59 | |
Natrinema | ||||||
nat | Natrinema sp. J7-2 | 4,302 | 1,550 | 58 | 58 | |
npe | Natrinema pellirubrum | 4,199 | 1,708 | 58 | 58 | |
nvr | Natrinema versiforme | 4,327 | 1,841 | 76 | 64 | |
npl | Natrinema pallidum | 3,603 | 1,544 | 62 | 55 | |
nay | Natrinema zhouii | 4,985 | 1,889 | 63 | 45 | |
haly | Natrinema halophilum | 4,452 | 1,639 | 57 | 50 | |
hjt | Natrinema thermotolerans | 4,744 | 1,877 | 74 | 62 | |
hlo | Natrinema longum | 3,438 | 1,518 | 61 | 50 | |
Natronobacterium | ||||||
nge | Natronobacterium gregoryi | 3,656 | 1,577 | 59 | 56 | |
hlc | Natronobacterium lacisalsi | 4,097 | 1,785 | 60 | 56 | |
Halovivax | ||||||
hru | Halovivax ruber | 3,099 | 1,340 | 52 | 51 | |
Natronosalvus | ||||||
sawl | Natronosalvus rutilus | 4,062 | 1,570 | 57 | 1 | |
halv | Natronosalvus halobius | 3,609 | 1,406 | 55 | 1 | |
Natronococcus | ||||||
nou | Natronococcus occultus | 4,154 | 1,767 | 68 | 67 | |
Halostagnicola | ||||||
hlr | Halostagnicola larsenii | 4,171 | 1,755 | 56 | 52 | |
Natrarchaeobaculum | ||||||
naj | Natrarchaeobaculum aegyptiacum | 3,642 | 1,618 | 56 | 54 | |
nag | Natrarchaeobaculum sulfurireducens AArc-Mg | 3,737 | 1,635 | 60 | 52 | |
nan | Natrarchaeobaculum sulfurireducens AArc1 | 3,708 | 1,625 | 60 | 55 | |
nara | Natrialbaceae archaeon AArc-T1-2 | 3,314 | 1,374 | 59 | 2 | |
Natronorubrum | ||||||
nbg | Natronorubrum bangense | 4,098 | 1,837 | 81 | 67 | |
nas | Natronorubrum aibiense | 4,000 | 1,803 | 71 | 56 | |
hda | Natronorubrum daqingense | 3,642 | 1,569 | 54 | 50 | |
unclassified Nanohaloarchaea | ||||||
nac | Nanohaloarchaea archaeon SG9 | 1,183 | 477 | 31 | 8 | |
Methanoliparum | ||||||
melu | Candidatus Methanoliparum sp. LAM-1 | 1,347 | 837 | 47 | 2 | |
Methanonatronarchaeum | ||||||
meam | Methanonatronarchaeum sp. AMET6-2 | 1,411 | 864 | 46 | 4 | |
meae | Methanonatronarchaeum sp. AMET-Sl | 1,536 | 898 | 44 | 1 | |
Thermoplasmatota | ||||||
Thermoplasma | ||||||
tac | Thermoplasma acidophilum | Ref | 1,478 | 804 | 45 | 44 |
tvo | Thermoplasma volcanium | 1,526 | 850 | 50 | 48 | |
Oxyplasma | ||||||
omr | Oxyplasma meridianum | 1,654 | 813 | 51 | ||
Picrophilus | ||||||
pto | Picrophilus oshimae | 1,535 | 902 | 47 | 6 | |
Ferroplasma | ||||||
fac | Ferroplasma acidarmanus | 1,951 | 985 | 48 | 48 | |
fai | Ferroplasma acidiphilum | 1,763 | 936 | 62 | 45 | |
Cuniculiplasma | ||||||
cdiv | Cuniculiplasma divulgatum | 1,816 | 870 | 54 | 44 | |
unclassified Thermoplasmatales | ||||||
tar | Thermoplasmatales archaeon BRNA1 | 1,528 | 870 | 49 | 48 | |
Methanomethylophilus | ||||||
max | Methanomethylophilus alvi | 1,646 | 923 | 52 | 48 | |
Methanomassiliicoccus | ||||||
mer | Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 | 1,826 | 960 | 50 | 40 | |
Methanoplasma | ||||||
mear | Candidatus Methanoplasma termitum | 1,404 | 799 | 49 | 47 | |
Methanogranum | ||||||
meuz | Candidatus Methanogranum gryphiswaldense | 1,513 | 893 | 52 | 1 | |
unclassified Thermoplasmata | ||||||
marc | Methanogenic archaeon ISO4-H5 | 1,817 | 988 | 54 | 44 | |
Aciduliprofundum | ||||||
abi | Aciduliprofundum boonei | 1,544 | 878 | 37 | 37 | |
acf | Aciduliprofundum sp. MAR08-339 | 1,525 | 856 | 50 | 50 | |
Thermoproteota | ||||||
Aeropyrum | ||||||
ape | Aeropyrum pernix | Ref | 1,700 | 910 | 52 | 52 |
acj | Aeropyrum camini | 1,645 | 914 | 50 | 50 | |
Staphylothermus | ||||||
smr | Staphylothermus marinus | 1,570 | 872 | 45 | 45 | |
shc | Staphylothermus hellenicus | 1,599 | 835 | 48 | 47 | |
Ignicoccus | ||||||
iho | Ignicoccus hospitalis | 1,434 | 789 | 50 | 50 | |
iis | Ignicoccus islandicus | 1,511 | 774 | 52 | 48 | |
ipc | Ignicoccus pacificus | 1,862 | 524 | 51 | 1 | |
Desulfurococcus | ||||||
dka | Desulfurococcus amylolyticus 1221n | 1,471 | 837 | 50 | 50 | |
dfd | Desulfurococcus amylolyticus DSM 16532 | 1,421 | 837 | 51 | 50 | |
dmu | Desulfurococcus mucosus | 1,345 | 791 | 50 | 49 | |
Thermosphaera | ||||||
tag | Thermosphaera aggregans | 1,387 | 785 | 47 | 47 | |
tcs | Thermosphaera chiliense | 1,399 | 781 | 50 | ||
Ignisphaera | ||||||
iag | Ignisphaera aggregans | 1,930 | 923 | 50 | 47 | |
Thermogladius | ||||||
thg | Thermogladius calderae | 1,414 | 831 | 49 | 49 | |
Hyperthermus | ||||||
hbu | Hyperthermus butylicus | 1,602 | 842 | 52 | 52 | |
Pyrolobus | ||||||
pfm | Pyrolobus fumarii | 1,967 | 910 | 52 | 48 | |
Pyrodictium | ||||||
pdl | Pyrodictium delaneyi | 2,036 | 1,016 | 50 | 39 | |
pabi | Pyrodictium abyssi | 2,464 | 1,017 | 37 | ||
Pyrofollis | ||||||
pare | Pyrofollis japonicus | 2,063 | 993 | 39 | 1 | |
Sulfurisphaera | ||||||
sto | Sulfurisphaera tokodaii | 2,816 | 1,196 | 49 | 48 | |
soh | Sulfurisphaera ohwakuensis | 2,771 | 1,223 | 51 | 47 | |
sjv | Sulfurisphaera javensis | 2,782 | 1,131 | 48 | ||
Saccharolobus | ||||||
sso | Saccharolobus solfataricus P2 | Ref | 2,994 | 1,349 | 56 | 50 |
sol | Saccharolobus solfataricus 98/2 | 2,679 | 1,194 | 49 | 49 | |
ssoa | Saccharolobus solfataricus SULA | 2,652 | 1,193 | 50 | 48 | |
ssol | Saccharolobus solfataricus SARC-B | 2,652 | 1,193 | 50 | 48 | |
ssof | Saccharolobus solfataricus SARC-C | 2,651 | 1,192 | 50 | 48 | |
sshi | Saccharolobus shibatae | 3,221 | 1,294 | 47 | 19 | |
scas | Saccharolobus caldissimus | 3,307 | 1,279 | 49 | 14 | |
sis | Saccharolobus islandicus L.S.2.15 | 2,738 | 1,223 | 50 | 50 | |
sia | Saccharolobus islandicus M.14.25 | 2,609 | 1,191 | 48 | 48 | |
sim | Saccharolobus islandicus M.16.27 | 2,657 | 1,196 | 48 | 48 | |
sid | Saccharolobus islandicus M.16.4 | 2,736 | 1,191 | 51 | 50 | |
siy | Saccharolobus islandicus Y.G.57.14 | 2,905 | 1,262 | 48 | 48 | |
sin | Saccharolobus islandicus Y.N.15.51 | 2,900 | 1,264 | 50 | 49 | |
sii | Saccharolobus islandicus L.D.8.5 | 2,949 | 1,235 | 48 | 48 | |
sih | Saccharolobus islandicus HVE10/4 | 2,723 | 1,261 | 103 | 50 | |
sir | Saccharolobus islandicus REY15A | 2,644 | 1,203 | 109 | 50 | |
sic | Saccharolobus islandicus LAL14/1 | 2,601 | 1,179 | 48 | 48 | |
sula | Saccharolobus sp. A20 | 2,497 | 1,158 | 50 | 46 | |
sule | Saccharolobus sp. E5-1-F | 2,450 | 1,196 | 51 | 21 | |
Sulfolobus | ||||||
sai | Sulfolobus acidocaldarius DSM 639 | Ref | 2,223 | 1,031 | 82 | 51 |
sacn | Sulfolobus acidocaldarius N8 | 2,275 | 1,039 | 33 | 31 | |
sacr | Sulfolobus acidocaldarius Ron12/I | 2,317 | 1,045 | 33 | 31 | |
sacs | Sulfolobus acidocaldarius SUSAZ | 2,146 | 1,041 | 50 | 50 | |
sulo | Sulfolobus sp. E11-6 | 2,272 | 1,059 | 52 | 21 | |
sull | Sulfolobus sp. S-194 | 2,697 | 1,175 | 51 | 15 | |
Metallosphaera | ||||||
mse | Metallosphaera sedula DSM 5348 | 2,256 | 1,116 | 46 | 44 | |
memj | Metallosphaera sedula MJ1HA | 2,574 | 1,091 | 51 | 1 | |
mcn | Metallosphaera cuprina | 2,029 | 975 | 48 | 46 | |
mhk | Metallosphaera hakonensis JCM 8857 = DSM 7519 | 2,379 | 1,112 | 51 | 46 | |
mpru | Metallosphaera prunae | 2,310 | 1,124 | 49 | 44 | |
mten | Metallosphaera tengchongensis | 2,154 | 1,061 | 52 | 48 | |
mjn | Metallosphaera javensis | 2,976 | 1,176 | 49 | 1 | |
Acidianus | ||||||
aho | Acidianus hospitalis | 2,329 | 1,050 | 75 | 50 | |
aman | Acidianus manzaensis | 2,644 | 1,218 | 51 | 41 | |
abri | Acidianus brierleyi | 2,871 | 1,260 | 51 | 44 | |
asul | Acidianus sulfidivorans | 2,259 | 1,104 | 51 | 45 | |
aamb | Acidianus ambivalens | 2,373 | 1,098 | 52 | 46 | |
acih | Acidianus sp. HS-5 | 2,853 | 1,134 | 48 | 33 | |
Sulfodiicoccus | ||||||
sacd | Sulfodiicoccus acidiphilus | 2,411 | 1,053 | 48 | 31 | |
Stygiolobus | ||||||
sazo | Stygiolobus azoricus | 2,042 | 1,020 | 51 | 47 | |
csty | Stygiolobus caldivivus | 2,973 | 1,136 | 49 | 5 | |
Sulfuracidifex | ||||||
step | Sulfuracidifex tepidarius | 2,779 | 1,059 | 52 | 35 | |
smet | Sulfuracidifex metallicus | 2,268 | 994 | 53 | 1 | |
unclassified Sulfolobales | ||||||
sahs | Sulfolobales archaeon HS-7 | 2,140 | 862 | 48 | 1 | |
Pyrobaculum | ||||||
pai | Pyrobaculum aerophilum | Ref | 2,605 | 1,021 | 90 | 30 |
pis | Pyrobaculum islandicum | 1,978 | 994 | 48 | 26 | |
pcl | Pyrobaculum calidifontis | 2,149 | 1,043 | 26 | 22 | |
pas | Pyrobaculum arsenaticum | 2,298 | 1,061 | 45 | 41 | |
pyr | Pyrobaculum ferrireducens | 2,827 | 1,105 | 34 | 18 | |
pog | Pyrobaculum oguniense | 2,835 | 1,131 | 145 | 51 | |
tne | Pyrobaculum neutrophilum | 1,966 | 988 | 43 | 29 | |
pyw | Pyrobaculum sp. WP30 | 2,216 | 985 | 9 | 4 | |
Caldivirga | ||||||
cma | Caldivirga maquilingensis | 1,963 | 984 | 45 | 42 | |
Thermoproteus | ||||||
ttn | Thermoproteus tenax | 2,049 | 1,046 | 50 | 25 | |
tuz | Thermoproteus uzoniensis | 2,186 | 1,024 | 38 | 28 | |
Vulcanisaeta | ||||||
vdi | Vulcanisaeta distributa | 2,493 | 1,101 | 49 | 40 | |
vmo | Vulcanisaeta moutnovskia | 2,320 | 1,049 | 45 | 42 | |
vso | Vulcanisaeta souniana | 2,664 | 915 | 48 | 1 | |
Thermofilum | ||||||
tpe | Thermofilum pendens | 1,876 | 974 | 40 | 33 | |
thb | Thermofilum adornatum 1910b | 1,896 | 978 | 46 | 37 | |
tcb | Thermofilum adornatum 1505 | 1,924 | 955 | 42 | 33 | |
Infirmifilum | ||||||
thf | Infirmifilum uzonense | 1,455 | 784 | 50 | 23 | |
thel | Infirmifilum lucidum | 1,763 | 912 | 49 | 2 | |
Acidilobus | ||||||
asc | Acidilobus saccharovorans | 1,499 | 822 | 48 | 48 | |
acia | Acidilobus sp. 7A | 1,324 | 732 | 50 | 44 | |
Caldisphaera | ||||||
clg | Caldisphaera lagunensis | 1,478 | 837 | 50 | 45 | |
Fervidicoccus | ||||||
ffo | Fervidicoccus fontis | 1,385 | 780 | 45 | 37 | |
Korarchaeum | ||||||
kcr | Candidatus Korarchaeum cryptofilum | 1,602 | 924 | 49 | 47 | |
Nitrososphaerota | ||||||
Nitrosopumilus | ||||||
nmr | Nitrosopumilus maritimus | Ref | 1,795 | 847 | 43 | 42 |
nir | Candidatus Nitrosopumilus sediminis | 1,974 | 845 | 40 | 39 | |
nkr | Candidatus Nitrosopumilus koreensis | 1,890 | 811 | 41 | 39 | |
nid | Nitrosopumilus piranensis | 2,161 | 864 | 48 | 41 | |
nin | Nitrosopumilus adriaticus | 2,184 | 870 | 49 | 40 | |
niw | Candidatus Nitrosopumilus sp. SW | 1,729 | 829 | 47 | 33 | |
ncl | Nitrosopumilus cobalaminigenes | 1,800 | 825 | 46 | 34 | |
nox | Nitrosopumilus oxyclinae | 1,765 | 833 | 46 | 33 | |
nue | Nitrosopumilus ureiphilus | 2,423 | 981 | 48 | 33 | |
nip | Nitrosopumilus sp. K4 | 1,931 | 852 | 50 | ||
nzt | Nitrosopumilus zosterae | 2,055 | 854 | 48 | ||
Nitrosomarinus | ||||||
nct | Candidatus Nitrosomarinus catalina | 1,677 | 802 | 45 | 39 | |
Nitrosarchaeum | ||||||
nic | Nitrosarchaeum sp. AC2 | 1,885 | 812 | 45 | 30 | |
Nitrososphaera | ||||||
nga | Candidatus Nitrososphaera gargensis | 3,565 | 1,098 | 37 | 34 | |
nvn | Nitrososphaera viennensis | 3,123 | 1,055 | 48 | 38 | |
nev | Candidatus Nitrososphaera evergladensis | 3,499 | 1,100 | 43 | 35 | |
Nitrosocosmicus | ||||||
taa | Candidatus Nitrosocosmicus oleophilus | 3,725 | 1,062 | 33 | 33 | |
nfn | Candidatus Nitrosocosmicus franklandus | 3,180 | 990 | 38 | 27 | |
Nitrosocaldus | ||||||
ncv | Candidatus Nitrosocaldus cavascurensis | 1,766 | 825 | 35 | 10 | |
Nitrosotalea | ||||||
ndv | Nitrosotalea devaniterrae | 2,103 | 858 | 41 | 25 | |
Cenarchaeum | ||||||
csy | Cenarchaeum symbiosum | 2,017 | 787 | 49 | 47 | |
Caldarchaeum | ||||||
csu | Candidatus Caldarchaeum subterraneum | 1,730 | 949 | 48 | 48 | |
Nitrosopelagicus | ||||||
nbv | Candidatus Nitrosopelagicus brevis | 1,445 | 744 | 43 | 25 | |
Nitrosotenuis | ||||||
tah | Candidatus Nitrosotenuis cloacae | 1,717 | 848 | 45 | 28 | |
niu | Candidatus Nitrosotenuis sp. DW1 | 1,994 | 881 | 47 | ||
nck | Candidatus Nitrosotenuis chungbukensis | 1,951 | 571 | 50 | ||
Conexivisphaera | ||||||
ccai | Conexivisphaera calida | 1,607 | 867 | 48 | 17 | |
Bathyarchaeota | ||||||
unclassified Bathyarchaeota | ||||||
barc | Candidatus Bathyarchaeota archaeon BA1 | 2,403 | 845 | 11 | 3 | |
barb | Candidatus Bathyarchaeota archaeon BA2 | 1,761 | 695 | 20 | 5 | |
Nanobdellota | ||||||
Nanoarchaeum | ||||||
neq | Nanoarchaeum equitans | 536 | 312 | 17 | ||
Nanopusillus | ||||||
naa | Candidatus Nanopusillus acidilobi | 587 | 287 | 46 | 10 | |
Nanobdella | ||||||
naer | Nanobdella aerobiophila | 736 | 186 | 46 | 1 | |
Micrarchaeota | ||||||
Mancarchaeum | ||||||
marh | Candidatus Mancarchaeum acidiphilum Mia14 | 952 | 444 | 53 | 3 | |
Fermentimicrarchaeum | ||||||
flt | Candidatus Fermentimicrarchaeum limneticum | 1,358 | 578 | 37 | 4 | |
Micrarchaeum | ||||||
miy | Candidatus Micrarchaeum sp. A_DKE | 1,025 | 496 | 31 | ||
Unclassified Micrarchaeota | ||||||
marv | Candidatus Micrarchaeota archaeon ARM-1 | 849 | 405 | 49 | ||
Nanohalarchaeota | ||||||
Nanohalobium | ||||||
ncon | Candidatus Nanohalobium constans | 1,162 | 501 | 42 | 2 | |
Nanohalococcus | ||||||
nocc | Candidatus Nanohalococcus occultus | 1,046 | 436 | 42 | ||
Nanohalovita | ||||||
nhf | Candidatus Nanohalovita haloferacivicina | 1,169 | 94 | 41 | ||
Woesearchaeota | ||||||
unclassified Woesearchaeota | ||||||
war | Candidatus Woesearchaeota archaeon NC_groundwater_85_Ag_S-0.1um_31_13 | 866 | 354 | 45 | ||
Promethearchaeota | ||||||
Lokiarchaeum | ||||||
loki | Candidatus Lokiarchaeum sp. GC14_75 | 5,384 | 1,607 | 29 | 2 | |
lob | Candidatus Lokiarchaeum ossiferum | 5,119 | 1,461 | 43 | ||
Promethearchaeum | ||||||
psyt | Promethearchaeum syntrophicum | 3,868 | 1,255 | 49 | 1 | |
Odinarchaeota | ||||||
Odinarchaeum | ||||||
oyw | Candidatus Odinarchaeum yellowstonii | 1,487 | 23 | 51 | ||
unclassified Archaea | ||||||
agw | Archaeon GW2011_AR10 | 1,339 | 567 | 34 | 2 | |
arg | Archaeon GW2011_AR20 | 1,010 | 381 | 34 | 25 | |
Special categories | ||||||
ag | Functionally characterized proteins based on publications | Ref | 4,249 | 4,187 | ||
vg | Virus genes and proteins | 676,333 | 56,731 | 12,287 | 646 | |
vp | Mature viral peptides | 377 | 305 |
* Reference GENES dataset used for computational KO assignment by BlastKOALA and GhostKOALA (see KO assignment)
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