Species

KNApSAcK Entry

Organism name Boesenbergia pandurata
Genus Boesenbergia
Family Zingiberaceae
Kingdom Plantae

NCBI taxonomy

Entry

Linked NCBI taxonomy name Boesenbergia
Linked NCBI taxonomy ID 97724
Linked level genus

Family

Family in NCBI taxonomy Zingiberaceae
ID 4642

Kingdom (Superkingdom)

Kingdom (Superkingdom) in NCBI taxonomy Viridiplantae
ID 33090

Plant class

Plant class Liliopsida
ID 4447

Metabolite list (29)

KNApSAcK ID name ChEMBL link CTD link # of proteins in
ChEMBL interaction
/ related OMIM
/ related KEGG DISEASE
# of genes in
CTD interaction
/ related diseases
KCF-S
cluster
phytochemical
cluster
figure
C00003871 External link 512 5,7,3',4'-Tetramethoxyflavone
/ Luteolin 5,7,3',4'-tetramethyl ether
CHEMBL327340
C103111
1 / 0 No. 8 No. 15
C00038097 External link 512 (2S)-6-Geranylpinostrobin
CHEMBL399909
No. 19 No. 14
C00038046 External link 512 (-)-6-Geranylpinocembrin
CHEMBL254612
No. 19 No. 14
C00038094 External link 512 (-)-(2R)-8-Geranylpinostrobin
CHEMBL252728
No. 19 No. 14
C00008143 External link 512 Alpinetin
/ (-)-Alpinetin
CHEMBL427218
CHEMBL254825
No. 25 No. 14
C00008225 External link 512 Naringenin 5-methyl ether
/ Naringenin 5-O-methyl ether
/ 7,4'-Dihydroxy-5-methoxyflavanone
/ (-)-7,4'-Dihydroxy-5-methoxyflavanone
CHEMBL255035
CHEMBL501251
No. 25 No. 14
C00008144 External link 512 Pinostrobin
/ (-)-Pinostrobin
/ (2S)-Pinocembrin
/ (-)-(2S)-Pinocembrin
CHEMBL254613
1 / 2 / 0 No. 25 No. 14
C00038060 External link 512 (-)-Pinocembrin
CHEMBL70518
CHEMBL399910
CHEMBL399249
18 / 23 / 23 No. 25 No. 14
C00003821 External link 512 5,7,4'-Trimethoxyflavone
/ Apigenin 5,7,4'-trimethyl ether
CHEMBL1087720
C103112
1 / 1 / 0 1 / 0 No. 35 No. 15
C00001042 External link 512 3,5,7-trimethoxyflavone
/ Galangin trimethyl ether
/ Galangin 3,5,7-trimethyl ether
CHEMBL75772
1 / 0 / 0 No. 35 No. 15
C00004537 External link 512 3,7-Dimethylgalangin
/ Galangin 3,7-dimethyl ether
/ 3,7-Dimethoxy-5-hydroxyflavone
/ 5-Hydroxy-3,7-dimethoxy-2-phenyl-4H-1-benzopyran-4-one
CHEMBL1097683
No. 35 No. 15
C00001028 External link 512 5,7-Dimethoxyflavone
/ chrysin 5,7-dimethyl ether
CHEMBL275391
C060298
14 / 13 / 13 2 / 3 No. 35 No. 15
C00003795 External link 512 Tectochrysin
/ 5-hydroxy-7-methoxyflavone
CHEMBL164841
12 / 19 / 14 No. 76 No. 15
C00006936 External link 512 Flavokawin B
CHEMBL104255
19 / 31 / 55 No. 79
C00006957 External link 512 Flavokawain C
CHEMBL251958
No. 79
C00006958 External link 512 Flavokawin A
/ 2'-Hydroxy-4,4',6'-trimethoxychalcone
CHEMBL243829
3 / 3 / 0 No. 79
C00006934 External link 512 Pinostrobin chalcone
/ 2',6'-Dihydroxy-4'-methoxychalcone
CHEMBL317221
CHEMBL1705800
3 / 1 / 2 No. 92 No. 13
C00006935 External link 512 Cardamomin
CHEMBL378104
13 / 18 / 14 No. 92 No. 13
C00007131 External link 512 Boesenbergin A
CHEMBL442440
No. 186
C00007132 External link 512 Boesenbergin B
CHEMBL404850
No. 186
C00038202 External link 512 2',4'-Dihydroxy-3'-(1''-geranyl)-6'-methoxychalcone
CHEMBL255070
No. 190 No. 13
C00038055 External link 512 (-)-Hydroxypanduratin A
CHEMBL210882
No. 322
C00038059 External link 512 (-)-Panduratin A
CHEMBL379110
CHEMBL465442
No. 322
C00038090 External link 512 (1'R,2'S,6'R)-2-Hydroxyisopanduratin A
CHEMBL255085
No. 322
C00007134 External link 512 Panduratin A
/ (+)-Panduratin A
CHEMBL379110
CHEMBL465442
No. 322
C00039264 External link 512 Geranyl-2,4-dihydroxy-6-phenethylbenzoate
CHEMBL252154
No. 429 No. 26
C00029550 External link 512 5,6-Dehydrokawain
/ Desmethoxyyangonin
CHEMBL254218
12 / 16 / 44 No. 1312 No. 63
C00007133 External link 512 Rubranine
No. 4362
C00007136 External link 512 Panduratin B
No. 6941

Human Protein / Gene in interactions

58 ChEMBL Protein in interactions

accession description class description KNApSAcK metabolite in interactions # of diseases
(OMIM / KEGG)
Q96QE3 ATPase family AAA domain-containing protein 5 Unclassified protein C00001028 C00003795 C00006936 C00038060 0 / 0
P08684 Cytochrome P450 3A4 Cytochrome P450 3A4 C00003795 C00006936 C00029550 C00038060 0 / 1
Q9UNQ0 ATP-binding cassette sub-family G member 2 ATP binding cassette C00001028 C00006936 C00006958 C00008144 2 / 0
P10636 Microtubule-associated protein tau Unclassified protein C00003795 C00006935 C00006936 C00038060 4 / 3
Q03164 Histone-lysine N-methyltransferase 2A Enzyme C00001028 C00006935 C00006936 C00038060 1 / 2
P08183 Multidrug resistance protein 1 drug C00003795 C00003821 C00006958 1 / 0
P63092 Guanine nucleotide-binding protein G(s) subunit alpha isoforms short Other membrane protein C00006935 C00006936 C00038060 7 / 3
P11712 Cytochrome P450 2C9 Cytochrome P450 2C9 C00003795 C00006934 C00038060 0 / 1
O75496 Geminin Unclassified protein C00003795 C00006935 C00006936 0 / 0
O00255 Menin Unclassified protein C00001028 C00006935 C00038060 2 / 5
P33261 Cytochrome P450 2C19 Cytochrome P450 2C19 C00003795 C00006934 C00038060 1 / 1
P04637 Cellular tumor antigen p53 Transcription Factor C00006936 C00029550 7 / 37
O15118 Niemann-Pick C1 protein Unclassified protein C00001028 C00003795 1 / 1
Q9UNA4 DNA polymerase iota Enzyme C00001028 C00006935 0 / 0
Q99714 3-hydroxyacyl-CoA dehydrogenase type-2 Enzyme C00006936 C00038060 3 / 3
O75164 Lysine-specific demethylase 4A Enzyme C00006935 C00006936 0 / 0
P27695 DNA-(apurinic or apyrimidinic site) lyase Enzyme C00006934 C00038060 0 / 0
P43220 Glucagon-like peptide 1 receptor Glucagon-like peptide receptor C00001028 C00006936 0 / 0
Q99700 Ataxin-2 Unclassified protein C00006935 C00006936 1 / 1
Q9UIF8 Bromodomain adjacent to zinc finger domain protein 2B Unclassified protein C00006935 C00006936 0 / 0
Q16236 Nuclear factor erythroid 2-related factor 2 Unclassified protein C00003795 C00029550 0 / 0
P00352 Retinal dehydrogenase 1 Enzyme C00001028 C00029550 0 / 0
P84022 Mothers against decapentaplegic homolog 3 Unclassified protein C00006935 C00006936 2 / 0
P83916 Chromobox protein homolog 1 Unclassified protein C00038060 0 / 0
P51151 Ras-related protein Rab-9A Unclassified protein C00001028 0 / 0
P38398 Breast cancer type 1 susceptibility protein Enzyme C00001028 4 / 2
P04798 Cytochrome P450 1A1 Cytochrome P450 1A1 C00038060 0 / 0
P11309 Serine/threonine-protein kinase pim-1 Pim C00038060 0 / 0
P19793 Retinoic acid receptor RXR-alpha NR2B1 C00029550 0 / 0
P11473 Vitamin D3 receptor NR1I1 C00006936 2 / 3
Q9HC16 DNA dC->dU-editing enzyme APOBEC-3G Enzyme C00006935 0 / 0
P11021 78 kDa glucose-regulated protein Unclassified protein C00006936 0 / 0
O94782 Ubiquitin carboxyl-terminal hydrolase 1 Enzyme C00006936 0 / 0
P51843 Nuclear receptor subfamily 0 group B member 1 Nuclear hormone receptor subfamily 0 group B member 1 C00001028 2 / 2
Q16678 Cytochrome P450 1B1 Cytochrome P450 1B1 C00038060 4 / 4
Q96RI1 Bile acid receptor NR1H4 C00029550 0 / 0
P05177 Cytochrome P450 1A2 Cytochrome P450 1A2 C00038060 0 / 0
P16473 Thyrotropin receptor Glycohormone receptor C00003795 3 / 2
P37840 Alpha-synuclein Unclassified protein C00003795 4 / 2
P15428 15-hydroxyprostaglandin dehydrogenase [NAD(+)] Enzyme C00029550 2 / 2
P08047 Transcription factor Sp1 Unclassified protein C00038060 0 / 0
P51449 Nuclear receptor ROR-gamma Nuclear hormone receptor subfamily 1 group F member 3 C00029550 0 / 0
Q13315 Serine-protein kinase ATM Atypical serine/threonine protein kinase PIKK subfamily C00006936 1 / 4
Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 Enzyme C00038060 0 / 0
Q03181 Peroxisome proliferator-activated receptor delta NR1C2 C00029550 0 / 0
P04062 Glucosylceramidase Enzyme C00003795 6 / 4
Q6W5P4 Neuropeptide S receptor Neuropeptide receptor C00006935 1 / 0
P22001 Potassium voltage-gated channel subfamily A member 3 KCNA, Kv1.x (Shaker) C00006935 0 / 0
P33765 Adenosine receptor A3 Adenosine receptor C00001042 0 / 0
Q16637 Survival motor neuron protein Unclassified protein C00029550 4 / 1
P10635 Cytochrome P450 2D6 Cytochrome P450 2D6 C00038060 1 / 0
P10275 Androgen receptor NR3C4 C00029550 3 / 4
P35869 Aryl hydrocarbon receptor Transcription Factor C00029550 0 / 0
Q9UBT6 DNA polymerase kappa Enzyme C00001028 0 / 0
B2RXH2 Lysine-specific demethylase 4E Enzyme C00001028 0 / 0
O75874 Isocitrate dehydrogenase [NADP] cytoplasmic Enzyme C00006936 1 / 0
P33527 Multidrug resistance-associated protein 1 drugs C00006958 0 / 0
Q13148 TAR DNA-binding protein 43 Unclassified protein C00001028 1 / 1

3 Gene in CTD interactions

gene gene name gene description KNApSAcK metabolite in interactions
1545 CYP1B1, CP1B, CYPIB1, GLC3A, P4501B1 cytochrome P450, family 1, subfamily B, polypeptide 1 (EC:1.14.14.1) C00001028 C00003821
1543 CYP1A1, AHH, AHRR, CP11, CYP1, P1-450, P450-C, P450DX cytochrome P450, family 1, subfamily A, polypeptide 1 (EC:1.14.14.1) C00001028
4363 ABCC1, ABC29, ABCC, GS-X, MRP, MRP1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 C00003871

Related Diseases

Diseases related to proteins in ChEMBL interactions

OMIM (70)

OMIM preferred title UniProt
#300438 17-beta-hydroxysteroid dehydrogenase x deficiency Q99714
#300018 46,xy sex reversal 2; srxy2 P51843
#219080 Acth-independent macronodular adrenal hyperplasia; aimah P63092
#300200 Adrenal hypoplasia, congenital; ahc P51843
#202300 Adrenocortical carcinoma, hereditary; adcc P04637
#612069 Amyotrophic lateral sclerosis 10, with or without frontotemporal dementia; als10 Q13148
#300068 Androgen insensitivity syndrome; ais P10275
#312300 Androgen insensitivity, partial; pais P10275
#608584 Asthma-related traits, susceptibility to, 2 Q6W5P4
#208900 Ataxia-telangiectasia; at Q13315
#614740 Basal cell carcinoma, susceptibility to, 7; bcc7 P04637
#614490 Blood group, junior system; jr Q9UNQ0
#114480 Breast cancer P38398
#604370 Breast-ovarian cancer, familial, susceptibility to, 1; brovca1 P38398
#114500 Colorectal cancer; crc P84022
#127750 Dementia, lewy body; dlb P37840
#119900 Digital clubbing, isolated congenital P15428
#609535 Drug metabolism, poor, cyp2c19-related P33261
#608902 Drug metabolism, poor, cyp2d6-related P10635
#133239 Esophageal cancer P04637
#600274 Frontotemporal dementia; ftd P10636
#608013 Gaucher disease, perinatal lethal P04062
#230800 Gaucher disease, type i P04062
#230900 Gaucher disease, type ii P04062
#231000 Gaucher disease, type iii P04062
#231005 Gaucher disease, type iiic P04062
#137750 Glaucoma 1, open angle, a; glc1a Q16678
#231300 Glaucoma 3, primary congenital, a; glc3a Q16678
#137760 Glaucoma, primary open angle; poag Q16678
#137800 Glioma susceptibility 1; glm1 O75874
#605130 Hairy elbows, short stature, facial dysmorphism, and developmental delay Q03164
#145000 Hyperparathyroidism 1; hrpt1 O00255
#603373 Hyperthyroidism, familial gestational P16473
#609152 Hyperthyroidism, nonautoimmune P16473
#259100 Hypertrophic osteoarthropathy, primary, autosomal recessive, 1; phoar1 P15428
#275200 Hypothyroidism, congenital, nongoitrous, 1; chng1 P16473
#612244 Inflammatory bowel disease 13; ibd13 P08183
#151623 Li-fraumeni syndrome 1; lfs1 P04637
#613795 Loeys-dietz syndrome, type 3; lds3 P84022
#211980 Lung cancer P04637
#174800 Mccune-albright syndrome; mas P63092
#300705 Mental retardation, x-linked 17; mrx17 Q99714
#300220 Mental retardation, x-linked, syndromic 10; mrxs10 Q99714
#131100 Multiple endocrine neoplasia, type i; men1 O00255
#607948 Mycobacterium tuberculosis, susceptibility to P11473
#257220 Niemann-pick disease, type c1; npc1 O15118
#166350 Osseous heteroplasia, progressive; poh P63092
#167000 Ovarian cancer P38398
#614320 Pancreatic cancer, susceptibility to, 4; pnca4 P38398
#260500 Papilloma of choroid plexus; cpp P04637
#168601 Parkinson disease 1, autosomal dominant; park1 P37840
#605543 Parkinson disease 4, autosomal dominant; park4 P37840
#168600 Parkinson disease, late-onset; pd P04062
P37840
#260540 Parkinson-dementia syndrome P10636
#604229 Peters anomaly Q16678
#172700 Pick disease of brain P10636
#102200 Pituitary adenoma, growth hormone-secreting P63092
#103580 Pseudohypoparathyroidism, type ia; php1a P63092
#603233 Pseudohypoparathyroidism, type ib; php1b P63092
#612462 Pseudohypoparathyroidism, type ic; php1c P63092
#313200 Spinal and bulbar muscular atrophy, x-linked 1; smax1 P10275
#253300 Spinal muscular atrophy, type i; sma1 Q16637
#253550 Spinal muscular atrophy, type ii; sma2 Q16637
#253400 Spinal muscular atrophy, type iii; sma3 Q16637
#271150 Spinal muscular atrophy, type iv; sma4 Q16637
#183090 Spinocerebellar ataxia 2; sca2 Q99700
#275355 Squamous cell carcinoma, head and neck; hnscc P04637
#601104 Supranuclear palsy, progressive, 1; psnp1 P10636
#138900 Uric acid concentration, serum, quantitative trait locus 1; uaqtl1 Q9UNQ0
#277440 Vitamin d-dependent rickets, type 2a; vddr2a P11473

KEGG DISEASE (82)

KEGG name UniProt
H00033 Adrenal carcinoma O00255 (related)
P04637 (related)
H00034 Carcinoid O00255 (related)
H00045 Malignant islet cell carcinoma O00255 (related)
H00246 Primary hyperparathyroidism O00255 (related)
H01102 Pituitary adenomas O00255 (related)
H00136 Niemann-Pick disease type C (NPC) O15118 (related)
H00066 Lewy body dementia (LBD) P04062 (related)
P37840 (related)
H00126 Gaucher disease P04062 (related)
H00426 Defects in the degradation of ganglioside P04062 (related)
H00810 Progressive myoclonic epilepsy (PME) P04062 (related)
H00004 Chronic myeloid leukemia (CML) P04637 (related)
H00005 Chronic lymphocytic leukemia (CLL) P04637 (related)
Q13315 (related)
H00006 Hairy-cell leukemia P04637 (related)
H00008 Burkitt lymphoma P04637 (related)
H00009 Adult T-cell leukemia P04637 (related)
H00010 Multiple myeloma P04637 (related)
H00013 Small cell lung cancer P04637 (related)
H00014 Non-small cell lung cancer P04637 (related)
H00015 Malignant pleural mesothelioma P04637 (related)
H00016 Oral cancer P04637 (related)
P04637 (marker)
H00017 Esophageal cancer P04637 (related)
P04637 (marker)
H00018 Gastric cancer P04637 (related)
H00019 Pancreatic cancer P04637 (related)
P04637 (marker)
H00020 Colorectal cancer P04637 (related)
P04637 (marker)
H00022 Bladder cancer P04637 (related)
H00025 Penile cancer P04637 (related)
P04637 (marker)
H00026 Endometrial Cancer P04637 (related)
H00027 Ovarian cancer P04637 (related)
P38398 (related)
H00028 Choriocarcinoma P04637 (related)
H00029 Vulvar cancer P04637 (related)
H00031 Breast cancer P04637 (related)
P38398 (related)
H00032 Thyroid cancer P04637 (related)
H00036 Osteosarcoma P04637 (related)
P08684 (marker)
H00038 Malignant melanoma P04637 (related)
H00039 Basal cell carcinoma P04637 (related)
H00040 Squamous cell carcinoma P04637 (related)
H00041 Kaposi's sarcoma P04637 (related)
H00042 Glioma P04637 (related)
P04637 (marker)
H00044 Cancer of the anal canal P04637 (related)
H00046 Cholangiocarcinoma P04637 (related)
H00047 Gallbladder cancer P04637 (related)
H00048 Hepatocellular carcinoma P04637 (related)
H00055 Laryngeal cancer P04637 (related)
P04637 (marker)
H00881 Li-Fraumeni syndrome P04637 (related)
H01007 Choroid plexus papilloma P04637 (related)
H00021 Renal cell carcinoma P04637 (marker)
H00024 Prostate cancer P10275 (related)
H00062 Spinal and bulbar muscular atrophy (SBMA) P10275 (related)
H00608 46,XY disorders of sex development (Disorders in androgen synthesis or action) P10275 (related)
H00609 46,XY disorders of sex development (Other) P10275 (related)
H00058 Amyotrophic lateral sclerosis (ALS) P10636 (related)
Q13148 (related)
H00077 Progressive supranuclear palsy (PSP) P10636 (related)
H00078 Frontotemporal lobar degeneration (FTLD) P10636 (related)
H00342 Tuberculosis P11473 (related)
H00784 Localized autosomal recessive hypotrichosis P11473 (related)
H01143 Vitamin D-dependent rickets P11473 (related)
H01205 Coumarin resistance P11712 (related)
H00457 Primary hypertrophic osteoarthropathy (PHO) P15428 (related)
H01246 Isolated congenital nail clubbing (ICNC) P15428 (related)
H00250 Congenital nongoitrous hypothyroidism (CHNG) P16473 (related)
H01269 Congenital hyperthyroidism P16473 (related)
H01171 Poor drug metabolism (PM) P33261 (related)
H00057 Parkinson's disease (PD) P37840 (related)
H00552 Glycerol kinase deficiency (GKD) P51843 (related)
H00607 46,XY disorders of sex development (Disorders of gonadal development) P51843 (related)
H00244 Pseudohypoparathyroidism P63092 (related)
H00441 Progressive osseous heteroplasia (POH) P63092 (related)
H00501 Fibrous dysplasia, polyostotic P63092 (related)
H00001 Acute lymphoblastic leukemia (ALL) (precursor B lymphoblastic leukemia) Q03164 (related)
Q03164 (marker)
H00002 Acute lymphoblastic leukemia (ALL) (precursor T lymphoblastic leukemia) Q03164 (related)
H00064 Ataxia telangiectasia (AT) Q13315 (related)
H00094 DNA repair defects Q13315 (related)
H00848 Ataxia with ocular apraxia (AOA) Q13315 (related)
H00455 Spinal muscular atrophy (SMA) Q16637 (related)
H00612 Primary open angle glaucoma Q16678 (related)
H01075 Peters anomaly Q16678 (related)
H01159 Anterior segment dysgenesis (ASD) Q16678 (related)
H01203 Primary congenital glaucoma (PCG) Q16678 (related)
H00063 Spinocerebellar ataxia (SCA) Q99700 (related)
H00480 Non-syndromic X-linked mental retardation Q99714 (related)
H00658 Syndromic X-linked mental retardation Q99714 (related)
H00925 2-Methyl-3-hydroxybutyryl-CoA dehydrogenase (MHBD) deficiency Q99714 (related)

Diseases related to CTD interactions

3 disease in interactions with metabolites

MESH or OMIM name KNApSAcK
metabolite
D004938 Esophageal Neoplasms C00001028
D008114 Liver Neoplasms, Experimental C00001028
D011230 Precancerous Conditions C00001028